mRNA_F-serratus_M_contig1257.1915.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1257.1915.1
Unique NamemRNA_F-serratus_M_contig1257.1915.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: D7FK89_ECTSI (MaoC-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK89_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 9.160e-101
Identity = 193/404 (47.77%), Postives = 229/404 (56.68%), Query Frame = 2
Query:   92 MDERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPRQIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESD-PSRLKSLYCRFSRPVRLGDELEVRMWKR-----------------------VYDEEGGAPL-GVKG----------------CYQNARDDHE-----------TARPRAASHDDRGAISSE-VCRVRFAVFPKAIGGPSVVLDGSALVAR 1144
            M+   VD +   G  EGP  VSY  RDL+IYALGIG   R          R++ E    FSAFPTYPLVLP KGTSSDVVPFPG TL +LP  LR  V+ G +LHYDQS ++   LDP+GAEL   S V+G Y+RRGGVLLRT+  + DRSGR   + T G F+RGLKIS D GPPLPPR  P  P + PD   +VTVS +Q L YRLSGDYNAIH D EAA++AGL+ PILHGLCSLG+AA +VLR FC  D  S L SLYCRFS+ V  GD LEV+MW R                       V   EG  P  GV G                   +AR  H            ++ P  A+   +G    + V  +RF V    +GG  VV DG A+V R
Sbjct:    1 MEGSAVDASAIVGQAEGPFAVSYTRRDLIIYALGIGAEAR----------RFVDENDVAFSAFPTYPLVLPYKGTSSDVVPFPGRTLFVLPQALRGVVNTGGILHYDQSIDVFEPLDPRGAELASRSVVLGVYRRRGGVLLRTKTTLKDRSGRTLTETTQGTFMRGLKISGDVGPPLPPRANP--PKAAPDVVAAVTVSPQQALWYRLSGDYNAIHVDPEAAKAAGLERPILHGLCSLGVAAREVLRHFCPEDLSSGLVSLYCRFSKAVLPGDVLEVKMWGRAASHVCSSGGDVNDAGNERMGSTVAGTEGAPPAAGVNGGVAIGIAKDGRSSSSLATTHARRGHRGLAPHRVGVGGSSTPTKAARKTKGRSQQQGVEEIRFEVCSPRLGGAVVVADGKAVVKR 392          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A6H5KFU9_9PHAE (MaoC-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU9_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 8.500e-96
Identity = 188/415 (45.30%), Postives = 225/415 (54.22%), Query Frame = 2
Query:   92 MDERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPRQIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESD-PSRLKSLYCRFSRPVRLGDELEVRMWKRVYDE---------------------------------EGGAPLGV--------KGCYQNARDDHETARP------------RAASHDDRGAISSEVCRVRFAVFPKAIGGPSVVLDGSALVARRGEEFSRSRL 1174
            M    VD +   G  EGP  VSY  RDL+IYALGIG   R          R++ E    F AFPTYPLVLP KGTSSD+VPFPG TL LLP  LR  V+ GA+LHYDQS ++   L+P+GAELE  S V+G Y+RRGGVLLRT+  + DRSGR   + T G F+RGL+I+ D GP  PPR  P  P + PD   +VTVS +Q L YRLSGDYNAIH D EAA +AGL+ PILHGLCSLGIA  ++L+ FC  D  S L SLYCRFS+ V  GD L V+MW R                                      GGA +G+              AR  H    P            +AA   +  +    V  VRF V    +GG  VV DG A+V RRG+ F    L
Sbjct:    1 MKGSAVDASAIVGQAEGPFAVSYTRRDLIIYALGIGAETR----------RFVDENDVAFGAFPTYPLVLPYKGTSSDIVPFPGQTLFLLPQALRGVVNTGAILHYDQSIDVLEPLEPRGAELESCSVVLGVYRRRGGVLLRTKTTLKDRSGRTLTETTQGTFMRGLEITGDVGPSPPPRANP--PTAPPDVVAAVTVSPQQALWYRLSGDYNAIHVDPEAATAAGLERPILHGLCSLGIATREILQHFCPEDLSSGLVSLYCRFSKAVFPGDVLHVKMWGRAASHVWSSGGDGNDTGNDRMGSAAVTGAEGAPPAAGVNGGAAIGIAEDGRSSSSSATTCARRGHRGLVPHRGRVWGSSTPTKAARETEERSQQQGVEEVRFEVCSPRLGGAVVVADGRAVV-RRGKRFGEGVL 402          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A3R7J9T4_9STRA (MaoC-like domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9T4_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.440e-65
Identity = 122/276 (44.20%), Postives = 165/276 (59.78%), Query Frame = 2
Query:  107 VDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWK 931
            VDV +  G  E     SYN RDLL+YA+GI          G++D+++ YE   N++AFP YP+VLP KGTS DVVPFP  T++  P  +   ++P  +LH +QS E+   LDP G  L   ++VV FY +  G L+ T+ ++ D SG V  +  SG F+RGL      G  LPPR QIP R    PD       S  Q  +YRLSGDYN++H D E A+S G   PILHGLCS+G+A+  + + FC SDP+R KS+  RFS P   G+ ++ RMW+
Sbjct:    5 VDVDKILGSPEATWTASYNQRDLLVYAVGI----------GESDLQFAYEYADNYAAFPLYPVVLPFKGTSHDVVPFPPDTISATPDGM-PVINPAMILHGEQSLELLRPLDPSGGTLTGKTKVVSFYDKGKGTLMETQTLLEDDSGPV-ARLVSGSFVRGLTGYKGKGRKLPPRVQIPKRE---PDIVDEFKTSPHQAQVYRLSGDYNSLHIDPEIAQSVGFKQPILHGLCSMGVASSALYKQFCGSDPARFKSIRVRFSSPCYPGETIQTRMWQ 265          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A662XQG7_9STRA (MaoC-like domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQG7_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.760e-64
Identity = 125/296 (42.23%), Postives = 167/296 (56.42%), Query Frame = 2
Query:   80 ASRVMDERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWKRVYDEEGGAPL 964
            A  +M E  VDV +     E     SYN RDLL+YA+GI          G +D+++ YE H NF+AFP YP+ LP KG S DVVPFP  TL+  P  +   V+P  +LH +QS E+   LDP G  L   ++++ FY +  G L+ T+ +  D +G V  +  SG F+RGL      G  LP R QIP R    PD       S  Q  +YRLSGDYNA+H D E A+S G   PILHGLCS+G+A+  + + +C  DP+R KS+  RFS P   G+ ++ RMW+     EGG  L
Sbjct:   28 AEGIMSEERVDVDKILSSPEETFTASYNQRDLLVYAVGI----------GSSDLQFTYEYHDNFAAFPLYPVCLPFKGQSQDVVPFPPETLSATPNGM-PVVNPAMILHGEQSLELMRPLDPSGGTLVGKTKLISFYNKGKGTLMETQTLFEDANGPV-ARLISGSFVRGLTGFEGKGRKLPARVQIPKR---TPDVCDEFKTSPYQAQVYRLSGDYNALHIDPEIAQSVGFKQPILHGLCSMGVASQALYKQYCGGDPARFKSIRVRFSSPCYPGETIQTRMWQ-----EGGKVL 303          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A5D6XLR4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLR4_9STRA)

HSP 1 Score: 215 bits (547), Expect = 6.000e-63
Identity = 123/286 (43.01%), Postives = 170/286 (59.44%), Query Frame = 2
Query:   80 ASRVMDERVVDV-AETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWK 931
            + RV  +R++   AETF       + +YN RDL++YA GI          G++D+++ YE H  F+AFP YP+VL  KG S DVVPFP PT++  P  +   V+P  +LH +QS E+   LDP G EL+  ++VV F+ +  G LL T  +I+D +G V  +  SG F+RGL      G  LPPR QIP R    PDA V++     Q  LYRLSGDYN++H D E A S G  +PILHGLC++G+A   +   +C  DP+R KS+  RF+ P   G+ LE  MW+
Sbjct:    3 SERVDVDRILRTPAETF-------KATYNQRDLILYAAGI----------GESDLQFTYEYHDKFAAFPLYPVVLGFKGESQDVVPFPPPTISATPDGM-PVVNPAMILHGEQSLELLRPLDPAGGELQCETKVVSFFNKGKGTLLETETLISDAAGPV-ARLVSGSFVRGLTGFEGKGRKLPPRVQIPKRE---PDARVTLPTLPTQAQLYRLSGDYNSLHIDPEIATSVGFKAPILHGLCTMGVATRALYSRYCGGDPARFKSIRVRFASPCFPGETLETVMWE 266          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A8K1C8K2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8K2_PYTOL)

HSP 1 Score: 213 bits (542), Expect = 3.030e-62
Identity = 117/275 (42.55%), Postives = 160/275 (58.18%), Query Frame = 2
Query:  107 VDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMW 928
            V+ +     +E     SYN RDL++YA GI          G+ D+++ YE H NF+AFP YP+VL  KGTS DVVPFP PT+   P      V+P  +LH +QS E+   LDP GA L+   +V+ FY +  G L+ +  +++D  G V  +  SG FIRGL      G  LPPR +IP R   + + S ++     Q  +YRLSGDYN++H D E A+S G   PILHGLC++G A   + + FC+ DPSR KS+  RFS P   G+ LE +MW
Sbjct:    3 VNASAILNNSEQTYEASYNQRDLMLYAAGI----------GETDLQFTYEFHDNFAAFPLYPVVLGFKGTSHDVVPFPPPTMASFPEGFPP-VNPANMLHGEQSLELFRPLDPNGATLQCKGKVISFYDKGSGTLMESETLVSDDKGPV-ARLISGSFIRGLSGFEGKGRKLPPRVKIPQREPDLREVSKTLP---SQAQIYRLSGDYNSLHVDPEIAQSVGFKVPILHGLCTMGFATRALFKHFCKGDPSRFKSVRVRFSSPTFPGETLETQMW 262          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A662X2E1_9STRA (MaoC-like domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2E1_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.650e-59
Identity = 120/281 (42.70%), Postives = 161/281 (57.30%), Query Frame = 2
Query:   92 MDERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWK 931
            M    VDV E     E     SYN RDLL+YA+GI          G +D+++ YE H NF+AFP YP+ LP KG S DVVPFP  TL+  P  +   V+P  +LH +QS E+   LDP G  L   ++++ FY +  G L+ T+ + +D +G V  +  SG F+RGL      G  LP R QIP R    PD       S  Q  +YRLSGDYNA+H D E A+S G   PILHGLCS+G+A+  + + +C  DP+R KS+  RFS P   G+ ++ RMW+
Sbjct:    1 MSGERVDVDEILSSPEETFTASYNQRDLLVYAVGI----------GSSDLQFTYEYHDNFAAFPLYPVCLPFKGQSQDVVPFPPETLSATPNGM-PVVNPVMILHGEQSLELVRPLDPSGGTLVGKTKLISFYNKGKGTLMETQTLFSDVNGPV-ARLISGSFVRGLTGYEGKGRKLPARVQIPKR---APDVCDEFKTSPYQAQVYRLSGDYNALHIDPEIAQSVGFKQPILHGLCSMGVASQALYKQYCGGDPARFKSIRVRFSSPCYPGETIQTRMWQ 266          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: K3XCE2_GLOUD (MaoC-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XCE2_GLOUD)

HSP 1 Score: 203 bits (517), Expect = 1.740e-58
Identity = 114/278 (41.01%), Postives = 159/278 (57.19%), Query Frame = 2
Query:   98 ERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMW 928
            E  VDV       E     +YN RDL++YA GI          G++D+++ YE +  F+AFP YP+VL  KG S DVVPFP PTLT +P  +   V+P   LH +Q+ E+   L+P+G  L+  ++V+ F+ +  G L+ T  ++ D +G V  +  SG FIRGL      G  LPPR Q+P R    PDA  +      Q  +YRLSGDYN++H D E A+S G   PILHGLC++G A+  + + +C  DPS  KS+  RF+ P   G+ LE  MW
Sbjct:    4 EDRVDVDRILSNPEETFTATYNQRDLIVYAAGI----------GESDLQFTYEYNDKFAAFPLYPVVLSFKGESHDVVPFPPPTLTAVPDGMPP-VNPAMSLHGEQALELFRPLNPEGGALQCKTKVISFFNKGKGTLMETETIMQDANGPV-ARLISGNFIRGLTGFEGKGRKLPPRVQMPKRE---PDARDAYKTLATQAQIYRLSGDYNSLHIDPEIAKSVGFKEPILHGLCTMGFASRALYKRYCRGDPSLFKSIRVRFASPTYPGETLETVMW 266          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: H3G843_PHYRM (MaoC-like domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3G843_PHYRM)

HSP 1 Score: 199 bits (505), Expect = 4.680e-57
Identity = 114/266 (42.86%), Postives = 149/266 (56.02%), Query Frame = 2
Query:  137 EGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPR-QIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWK 931
            E     SYN RDLL+YA+GI          G++ +++ YE    FSAFP YP+ LP KG S DVV FP  T++  P  +    +P  +LH +QS E+   LDP G  L   ++V+ FY +  G L+ T+    D +G V  K  SG FIRGL      G  LPPR QIP R    PD       S  Q  +YRLSGDYNA+H D E A+S G   PILHGLCS+G+A+  + + FC  D  R KS+  RFS P   G+ ++ RMW+
Sbjct:    2 EATFTASYNQRDLLVYAVGI----------GESALQFTYEFDAQFSAFPLYPVCLPFKGQSQDVVSFPPETISAAPDGMPS-FNPAMILHGEQSLELLRPLDPAGGSLVGKTKVISFYDKGKGTLMETQTQFEDANGPV-AKLISGSFIRGLTGYEGKGRKLPPRVQIPKRQ---PDFYDEFKTSPHQAQVYRLSGDYNALHVDPEIAKSVGFKQPILHGLCSMGVASRALYKQFCSGDVVRFKSIRVRFSSPCFPGETIQTRMWQ 252          
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Match: A0A485LJF4_9STRA (Aste57867_20345 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJF4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.680e-56
Identity = 106/266 (39.85%), Postives = 148/266 (55.64%), Query Frame = 2
Query:  143 PLRVSYNSRDLLIYALGIGCCGRDDGQP-GDADMRYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDPGAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQR-RGGVLLRTRNVITDRSGRVYCKATSGVFIRGLKISSDAGPPLPPRQIPARPGSVPDASVSVTVSREQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFCESDPSRLKSLYCRFSRPVRLGDELEVRMWKR 934
            P  V+Y  RDLLIYALGIGC      +    AD+RY  E + NF+AFP YP+ L  KGTS D VP+P PTL   P  +    +P   LH +QS EI   L P GA+L +    +  + + +   L+ +   I D  G   C    G F+RG++     GP  P +  P  P   PDA +++  S  Q  +YRLSGDYN +H D E A++ G   PILHGLCS+G+AA  ++   C++DP   + +  R ++P   G+ LE R+W+R
Sbjct:   11 PFEVAYTQRDLLIYALGIGCGYYPKAEKEAHADLRYTSELNDNFAAFPLYPVALVFKGTSQDTVPYPPPTLAWFPDGMPAH-NPMGTLHAEQSIEIHRPLPPAGAKLTVERRAIALHPKGKANALMESEFKIVDDQGLPLCTLVMGSFLRGVEPFDGVGPKAPKK--PTMPTRAPDAVLALPTSVSQASIYRLSGDYNPLHVDPEMAQALGFQEPILHGLCSMGVAARALVHLCCDNDPRGFRKMSVRMTKPCLPGETLETRIWRR 273          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1257.1915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK89_ECTSI9.160e-10147.77MaoC-like domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFU9_9PHAE8.500e-9645.30MaoC-like domain-containing protein n=1 Tax=Ectoca... [more]
A0A3R7J9T4_9STRA2.440e-6544.20MaoC-like domain-containing protein n=3 Tax=Phytop... [more]
A0A662XQG7_9STRA1.760e-6442.23MaoC-like domain-containing protein n=1 Tax=Nothop... [more]
A0A5D6XLR4_9STRA6.000e-6343.01Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C8K2_PYTOL3.030e-6242.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X2E1_9STRA3.650e-5942.70MaoC-like domain-containing protein n=1 Tax=Nothop... [more]
K3XCE2_GLOUD1.740e-5841.01MaoC-like domain-containing protein n=1 Tax=Globis... [more]
H3G843_PHYRM4.680e-5742.86MaoC-like domain-containing protein n=15 Tax=Phyto... [more]
A0A485LJF4_9STRA1.680e-5639.85Aste57867_20345 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1257contigF-serratus_M_contig1257:103049..111375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.4
Seed ortholog evalue8.7e-84
Seed eggNOG ortholog2880.D7FK89
Hectar predicted targeting categoryother localisation
EggNOG free text desc.fatty acid beta-oxidation, unsaturated, even number
EggNOG OGsCOG2030@1,KOG1206@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1370
Cds size1086
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1257.1915.1prot_F-serratus_M_contig1257.1915.1Fucus serratus malepolypeptideF-serratus_M_contig1257 103140..111182 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929180.16571-UTR-F-serratus_M_contig1257:103048..1031391622929180.16571-UTR-F-serratus_M_contig1257:103048..103139Fucus serratus maleUTRF-serratus_M_contig1257 103049..103139 +
1690962739.5132604-UTR-F-serratus_M_contig1257:103048..1031391690962739.5132604-UTR-F-serratus_M_contig1257:103048..103139Fucus serratus maleUTRF-serratus_M_contig1257 103049..103139 +
1622929180.281519-UTR-F-serratus_M_contig1257:111182..1113751622929180.281519-UTR-F-serratus_M_contig1257:111182..111375Fucus serratus maleUTRF-serratus_M_contig1257 111183..111375 +
1690962739.5839431-UTR-F-serratus_M_contig1257:111182..1113751690962739.5839431-UTR-F-serratus_M_contig1257:111182..111375Fucus serratus maleUTRF-serratus_M_contig1257 111183..111375 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929180.1884313-CDS-F-serratus_M_contig1257:103139..1033891622929180.1884313-CDS-F-serratus_M_contig1257:103139..103389Fucus serratus maleCDSF-serratus_M_contig1257 103140..103389 +
1690962739.526658-CDS-F-serratus_M_contig1257:103139..1033891690962739.526658-CDS-F-serratus_M_contig1257:103139..103389Fucus serratus maleCDSF-serratus_M_contig1257 103140..103389 +
1622929180.2044702-CDS-F-serratus_M_contig1257:108947..1090741622929180.2044702-CDS-F-serratus_M_contig1257:108947..109074Fucus serratus maleCDSF-serratus_M_contig1257 108948..109074 +
1690962739.5367494-CDS-F-serratus_M_contig1257:108947..1090741690962739.5367494-CDS-F-serratus_M_contig1257:108947..109074Fucus serratus maleCDSF-serratus_M_contig1257 108948..109074 +
1622929180.219757-CDS-F-serratus_M_contig1257:109688..1098151622929180.219757-CDS-F-serratus_M_contig1257:109688..109815Fucus serratus maleCDSF-serratus_M_contig1257 109689..109815 +
1690962739.5468204-CDS-F-serratus_M_contig1257:109688..1098151690962739.5468204-CDS-F-serratus_M_contig1257:109688..109815Fucus serratus maleCDSF-serratus_M_contig1257 109689..109815 +
1622929180.2338834-CDS-F-serratus_M_contig1257:110099..1103101622929180.2338834-CDS-F-serratus_M_contig1257:110099..110310Fucus serratus maleCDSF-serratus_M_contig1257 110100..110310 +
1690962739.5568807-CDS-F-serratus_M_contig1257:110099..1103101690962739.5568807-CDS-F-serratus_M_contig1257:110099..110310Fucus serratus maleCDSF-serratus_M_contig1257 110100..110310 +
1622929180.2491152-CDS-F-serratus_M_contig1257:110488..1105981622929180.2491152-CDS-F-serratus_M_contig1257:110488..110598Fucus serratus maleCDSF-serratus_M_contig1257 110489..110598 +
1690962739.567107-CDS-F-serratus_M_contig1257:110488..1105981690962739.567107-CDS-F-serratus_M_contig1257:110488..110598Fucus serratus maleCDSF-serratus_M_contig1257 110489..110598 +
1622929180.264389-CDS-F-serratus_M_contig1257:110921..1111821622929180.264389-CDS-F-serratus_M_contig1257:110921..111182Fucus serratus maleCDSF-serratus_M_contig1257 110922..111182 +
1690962739.5757282-CDS-F-serratus_M_contig1257:110921..1111821690962739.5757282-CDS-F-serratus_M_contig1257:110921..111182Fucus serratus maleCDSF-serratus_M_contig1257 110922..111182 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1257.1915.1

>prot_F-serratus_M_contig1257.1915.1 ID=prot_F-serratus_M_contig1257.1915.1|Name=mRNA_F-serratus_M_contig1257.1915.1|organism=Fucus serratus male|type=polypeptide|length=362bp
MDERVVDVAETFGYTEGPLRVSYNSRDLLIYALGIGCCGRDDGQPGDADM
RYLYEGHPNFSAFPTYPLVLPCKGTSSDVVPFPGPTLTLLPTVLRDRVDP
GAVLHYDQSFEIQHSLDPKGAELEMWSEVVGFYQRRGGVLLRTRNVITDR
SGRVYCKATSGVFIRGLKISSDAGPPLPPRQIPARPGSVPDASVSVTVSR
EQVLLYRLSGDYNAIHADFEAARSAGLDSPILHGLCSLGIAALQVLRCFC
ESDPSRLKSLYCRFSRPVRLGDELEVRMWKRVYDEEGGAPLGVKGCYQNA
RDDHETARPRAASHDDRGAISSEVCRVRFAVFPKAIGGPSVVLDGSALVA
RRGEEFSRSRL*
back to top

mRNA from alignment at F-serratus_M_contig1257:103049..111375+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1257.1915.1 ID=mRNA_F-serratus_M_contig1257.1915.1|Name=mRNA_F-serratus_M_contig1257.1915.1|organism=Fucus serratus male|type=mRNA|length=8327bp|location=Sequence derived from alignment at F-serratus_M_contig1257:103049..111375+ (Fucus serratus male)
GGAAACCCTTTTCAAGCGAGCGTTTCGTTCGTTATTTCTAGGTAAGAGAT GGCCGGGACCTCACCCCAGATCTTGCGAAGCGTCCCGAGTCATGGACGAA CGGGTCGTGGACGTCGCTGAAACTTTTGGTTACACAGAGGGTCCTCTTAG GGTGTCGTATAACTCGCGAGATCTCTTGATTTATGCGCTCGGGATCGGTT GCTGCGGCAGGGATGACGGTCAGCCTGGAGACGCTGATATGCGTTACCTG TATGAGGGACACCCGAACTTTAGCGCATTTCCTACCTACCCACTTGTGCT ACCCTGCAAAGGAACTTCATCGGATGTGGTGCCTTTCCCAGGTATGATTG AAGTAGCTTCTTATCGTGTTTCGGCTCCCACAGCGGACGGTGGTGCATGT GATTTTTACCCAAAGTTCGGACCTGGAGCGGTCAAACCATTTTTTTTCAA TTTCGCCGCTTTTTTCCTGAACCCTGGATTGTGTTTCCTGAAACCTCTGA AATGCACACGCTTGAAACCTCTGAAATGCATCAGCATCGTCCATGTGCTG CAACAAACTCCCATGTGGGGTTTTGTTCTAATCAGCCAGTGCTCCCTAGC GACAGCTTCGACGCGTTTTCCCCCAGACTTTTGAAATACGCTCATTTTTT TCTTTAAGCACGTGATCGTCACGCGATTGGAACAAGGTTTACTGCTGTTG ACTGTGTTTTTATCATATGTTCGTTTTGTATGTAGTAAATATACAGACAG TACGTGGTCTGCTGGACAGGAAAATATCAAATATCAGAGGAACATCTACA AAAAACCAAACAAGGCAAAAACTACAATACGTGAGGGGAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAGACAGATGCATGGCGCGTAATTTGAAGCCG CGGCCATTCGTTCAATCGTTCAATCGTTCTTCGATACGCATGCGCCCCGA CAGCCACACGCAGTAACCGAACAACTTAACTGGCTGCGTTCTTTTTCGTT TTTGTTTCTTCTCTTTTCTTATAGACTATTTCGTGATGTTTTTATGTATT CCCGAGTATTTTTGTACCAAAACTGCTTTCTACTATTTGTATGGAGAGTG CTGTGTGTTTTCTTCCCATTCATTCTGGACATCAAGTTCGTTGGACGTAC CAGCCGGGGTCACACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTG CCTTAATTTTTCTCGCGAGAAGGATTCAGCCATTCCTTTCCCTCGTCGAC CGTGAAGTCGATTTTTGTGTACTAACGATTTGACCGTTCTCTTAGGCATT TTTTATTTTTTTATTTTTTTATTATTGAGAAAAAATCCCGTTTACCAGGA TTCCACAGGATTGGAACTCACGTCCCAACGCGCCAGAAGGTTACGAGGTT ACTTCTGAGCTACCGGGGCGATGTTGTACATTTTTTCTTCCAGATGGTTT CTTTATTCCTTGTGACCACGGACTGGAGTTTTGATAGCAATCACCAAAAA AAAAAAACGCACCCGCGAAACACTGCTGTACAGTACTGCAGTACCTGGTG TTGGTACTGTTTTAGAGCTACTTTAAAACAGAGTACAGTAGTAGTACATG TTTACTCCAACCTGGTAGGTTACAATGATACAGCATTTTCCTACCAGAGT AAACACGGTGTACGGTGTCTTCTGTTCCGCTTTGTGCTTCCGTGGTGATC GATCTACAACGACCATGGCTTCGACCCCATGAATGCTGCCTCGTTTTGGA TTATCGCCGCAAGGGATTGCAGTGGTATGAATTCAACACTTCGTAGGTGG TGCACCTGCGATGCCTAGGAATGGACGCCGTCGCTGAAATCGGGAGGAAT ATCGTGAGTAAGCACCAGATCCAGCCTGAGTGTGGGGAATGGGCAGGCTG ACGCGGGCCGGGACGGCCGAACCTGTCTCGCGAGACCAGATTCTCAGGCG CGAACGGGGGACAGACACGGAAATATTCACTTTTCCTGTTGAGCTGACAT GAACACGAGTATCATAGAGCAGGATTGGCAACGCTTACCCGGTTGATGCA TACCCTTGCTATATGTGTGACCCCATACATATACATTACTTTCAACATGC CCACTTCATACCAACAGTGGGTGCGGGATAGAGAGGCGTATATTAATCGG TCCATGGTGACCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTT ACTGGCCCTGTGCCAACGGACTCTCGGCAGTGCACGCCATCGGTACGCAA TTGCGTGACCCGATAAACTCGGGACTTACCCGATGGCGTATGGCGGTTTA ATATAAATATATGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAACTA AGCACCAGATTCAGCCTGAATATGGAGATGAGCAGGCTGACGCGGGACGG GACTGCCGAAACCGTCTCGCAAGACCAAATTCTCAGGCACGAACGCGGAC AGGGGAATATTATTTTCCCTGTTCAGCTGACCACGAGTAGAGCAGGATTG GCAACGCTTACCCGGTTGATGCATACCCTTGCTATATGTGTGACCATACA TATACATTACTTTCAACATGCCCACTTCATACCAACAGACAGTGGGTGTG GGAAAGAGAGGCGTATATTAATTGGTCCATGGTGACCTGCTAAGGCAGCA CTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGACGGACTCTC GGCAGTGCACGCCATCGGCACGCAATTGCGTGACCCGATAAACTCGGGAC TTACCCGATGGCGTATGGCGGTTTAATATAAATATATGGACGCCGCCGCG GAACTCGGGAGGAATCCCGTAACTAAGCACCAGATTCAGCCTGAATATGG AGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCGTCTCGCGAGAC CAAATTCTCAGGCACGAACGCGGACAGGGGAATATTATTTTCCCTGTTCA GCTGACCACGAGTAGAGCAGGATTGACAACGCTTACCCGGTTGATGCATA CCCTTGCTATATGTGTGACCATACATATACATTACTTTCAACATGCCCAC TTCATACCAACAGACAGTGGGGTGGGAAAGAGAGGCGTATATTAATTGGT CCATGGTGACCTGCTAAGGCAGCACTCGTTCGGAACTACCTTGAGGTTTA CTGGCCCTGTGCCGACGGACTCTCGGCCGTACGCAGTTGCGTGACCCGAT AAACTCGGGACTTACCCGATGGCGTACGGTGGTTTTATATAAATATATGG ACGCCGCCGCGGAACTCGGGAGGAATCCCGTAACTTAGCGCCAGATTCAG CCTGAATATGGAGATGAGTAGGCTAACGCGGGACGGGACTGCCGAAACCG TCTCGCGAGACCAAATTCTCAGGCACGAATGCGGACAgGGGAATATTATT TTCCCTGTTCAGCTGACCACGAGTAGAGCAGGATTGGCAACGCTTACCCG GTTGATGCATACCCTTGCTATATGTGTGACCATACATATACATTACTTTC AACATGCCCACTTCATACCAACAGACAGTGGGTGTGGGAAAGACGTATAT TAATTGGTCCATGGTGAGCTAAGGCAGCATTGGAACTACCTTGAGGTTTA ACCTTGTGAACGCCATCGGTACGCAATTTGATCCATACGATGGCGTTGGC GGTTTAATATAAATGTGTGACCATACAGATTCAGCCTGAATATGGAGATG AGCAGGCTGACGCGGGACGGGATACCGTTCTTACAACAGACCCAGGATTT TCAGGTTGAAACCGGTTCAGACCCCGAAATGTACTATTAATATGAAAAGC TCTTATCCTGTAAATAAGCGAGTATCGGATTGATGTACTGGTACACACAT TTGTTTATGTACGTGTGATAATCAGTTAAAGCAGAGTATGGATCAACCGG GTAAGGTTGCAAATCCTGGTCGCGCTGTCCCCATTCGCGCCTGAGAATTT GGTCTCGCGGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTTATTC TCCACACCCAGGCTGAATCTGGTGCTTTCTTACGGGAGTCCTCCCGATTT CCGCACAAGTGCCCGTATGCTTGTTGTTTGGTAAAGCCATTACTTGTACT ATTATACCATGTATATGTTTTCTTGTTTTTACCCGTTACTATATATATAT GTATGTATGTTCACACGTATATCAAGAGTATGGATCAACCGGGTAAGGTT GCCAGTCCTGCACGTGGTCAGCTGAACAGGAAAAAATAATATTTCGCTGT CCCCGTTCGTGCCTGAGAATTCGGTCTCGTGGGCGGGTCCGATAGTCCCG TCCCGCGCCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTAC TTACAGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATTCATTTATA ACCGCCATACGCCATCGGGTCAGTCCTGAGTTTATCGGGTCACGCAATTG CGTACCGATGGCGTTCACTGCCGAGAGTCCCCCGGCACGGGTATGTATGT ATGTATGGTCATCACATATAGCAGAGTATGGATCAACCGGGTAAGGTTGC CAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATATTCCCCTGTCCC CGTGCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTTAGCCATCCCGTC CCGCGTCAGCCTGTTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTT ATGCGACTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAACCGCCAT ACGCCATCGGGTCAGTTCCCTAGTTTTTCGGGTCACGCAAATGCGTACCG ATGGCGTTCACTGCCGAGAGTCCGTCGGCACAGGGCCAGAAAACCTCAAG GTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCGCTATGGACCAATTAGCA TTCGCCTCTCTTTCCCAAACCCACTATTGGTATGAAGTGGGCATGTTGAA AGTACCGGCGGTGTATCGTTAGATGATTTCACACGCTATGAATGTGTGTA CTGCGCCGCAGCTTGTTCCGACAAGCAAACACGACCGCAGCAATCTTCGG AGCCGTACCCGCACGTCACCGCAGCAATCATCAGTTACACGAAAATGCTG CACACAAAAGTTTTCAATAAAATGGTCCGCGGGTGCTGCAGCCTGGCGAT ATCGCTCTATATAGCTCTAGATTAAGAGCACCGACGTGTATGGTTGCTGA TCCTGATCGTGTGGTCAGCTGAACAGGGAAAATATGCTGGCGCCCGAGAA TTTGGTCTCGCGAGACGGGTTTGGTCGTCCCATCCCGCGAGACAGGTTTG GCCGTCCCATCCATACCGTCATCCGCCCCTCTTTTCATGCAACCAGTATT TTGATACCATACTTGCTTGGCGGAAGTCTCCGCGATATCAGCAAAAGATA TCTTGGGATTAACGGCGGATTTATTAATAGTACCGGGACCTTACAACACT CTTCCAGTATGTTCCCTGCACGATCAGTTAATGTGAGATAAAAAACAACA ACGACGAGTACTTGCATAAAATTTGCCCTATGTGTACAGCAATGAGCAAT CTAGAGGTAGAATGGTCCCGGAAAGATTGAGGGCTACCTCTATAGCTACG TTCGCGGCAGAAAATACTTCAAGTACAGCAATTGGCGTGTCGAAAACTGG TCCTCTGGTGTGTCATATTCACGACGCGAACGGAGCAGCGCAGTAAGTGT TGAAGCTATAAACCGTACATAACATCCCTGCAAGGCTGGGATCACCTCCC GTCTCCTCCTGACCACCGTGCGTGTAATTGATATTTTTTATCTTGTTACC CGGACTTGCCTCTCCATTTTTTCGCGAAACTCTCGACTATTAATAGAAGA AGAAAAAAACTAACATGATTCTCACTCCGTAATCTTCGGTGCTTCACAGG GCCGACGCTGACGCTGCTGCCCACAGTCCTTCGCGACCGAGTGGACCCTG GAGCAGTCCTCCACTACGACCAGTCGTTCGAAATTCAGCATTCCTTGGAT CCCAAAGGGGCAGAGCTGGAGATGTGGTGCGTGCGTCTATTTATCCGCAG GTCGCTTGTTTTCCAATGCCCGTTCTAGGGGCAGAGCCCGTTCTAGGGGC AGAGCCCGTTCTTACGGCAGAGCCCATTCTAAGGGCAGAGTTCGTTCTTA CGGCAGAGCCCGTTCTAAGGGCAGAGCCTGTTGTAAGGAAAGCTTTATCG CTCAAGACGCAGGCTCTTTCATTTACCGGCTAACCGGTTTATGGGACGAG TTCGACGGTTACGCCGAGCTGTGTAGGTGCTGCCTGTTACGAAAAAAGTA TGTCAATAGAATCTGCCCCCCCCCTCCTAGAAGTAATAGTAATATTTAAT ATATAGTAGCGTTGTTGCGGTCGCTGTTACTACTTGCGACAGAGCGCAAG GGAGGTCAAGAAGCAGAGTGTCAGAAGTCGTGAGGAAGAAGCTCGGACGC CTGAGTTCTTCCGCCCCGCGTCGGCGTCGAAAGTCCCGTGGAACAGCTCG TTGGCTTTTTTGCTGGAGAGGGAGGAGAGGGGCGAGGTCGCGGGGCGGCC GTGCCACTTACGCCGCTAGCCTTAGGTTTCGACCGCAACTGTTCGTTGTG CTGCTCGTCCGCGTGTGGTGTTTGATCTTGATTTCATTAGGTCCGAAGTG GTGGGTTTCTACCAGCGCCGGGGAGGCGTTTTGCTCCGAACGAGAAATGT GATCACCGACCGAAGCGGGCGCGTGTACTGCAAAGCCACCTCGGGAGTGT TCATCCGAGGTCTCAAGGTATTAATAAAATGGCAGGCGACACCCAATCTC TAAGAGGGTGCCGCGCGTATATTGTTCTAGAGTTCACTTCGTGCCCCAGC TGGGTACACAACCTAGCTCGAAAATCACCAGGTTGTCCCCAGACACTACG TATAGCCAATTGCTGCTGCAAACAATAGTGAAGCTCGCCGCGCAGCATTT TAATTTTACACGCACTCACGTACCGTGCGCAAGGCTGACGCGCGTCCAAT CCCCTTGCTTCGTCCGTCGCATACCGTGCTACATCCATTGCGCCGCCGAA GATCTCGAGCGACGCCGGACCGCCGCTGCCCCCGCGCCAGATACCCGCTC GTCCCGGATCCGTCCCCGACGCCTCCGTCAGCGTGACGGTTTCGCGTGAA CAGGTGCTGCTGTACCGCCTGTCAGGCGACTACAACGCCATACACGCCGA CTTCGAAGCCGCGCGGTCCGCGGGACTCGATAGCCCTATCCTTCACGGTC TGTGCTCGCTAGGTGTGATGTTTTAACAGGACGGGGTCGTGGGAGGTTGA TGGACAACAGCTCAAACCATGTAGGCGAGCGCGTTCGATTATTGGTTCCG AAGGTCTACGAAGTTGCAGAGCCACCCTGCCTCCCATTATGTTAACGCCT CGCCATTCCTCTTGTCTCCCGGGTACCGCCGAGAGCACAGGAATAGCCGC ACTACAAGTCCTGCGCTGCTTCTGCGAAAGCGATCCGAGTCGACTCAAGT CTTTGTACTGCCGATTCTCGCGACCCGTCAGACTGGGGGATGAACTCGAG GTACGTGCGCGTCGTGGTCTCCTCTACGCGTGGGTATAGCAGTTTCGCAC CGAAGGCGGTACTCGTTCCCATGGCGCAATGTGGTGCCGCAGTTTTGTTA CCGACGGAGCAGGAAATCATGGAAGCCAATCACGGCCCAGTTTGGAGAAC ATCAGGAGTTGACAACCATCATCCAATTAATTGCAGATTTCAATCGATGA GAGCAGCTGCGCTTTTTGAACGCCACGGATTCCCTCTACCGCTAACGACT CTTGTGACAATAACAGTAGCAGGACGGCTCTCGTGTCGCGCGATTTTTCT TGGATCCGTTTATTTAATCATAGGTCAGGATGTGGAAGAGAGTCTATGAT GAGGAAGGCGGTGCTCCACTTGGAGTCAAGGGGTGCTATCAAAATGCGCG CGATGATCACGAGACTGCACGACCACGAGCTGCATCTCACGACGACCGTG GGGCGATATCCTCAGAGGTTTGCCGAGTTAGGTTCGCTGTGTTTCCTAAA GCGATTGGCGGCCCTAGTGTGGTGCTGGACGGAAGCGCCCTCGTCGCGCG TCGCGGAGAAGAGTTTTCACGGTCAAGATTGTAACGTTTTGACTGGAAAG TCTTGAGAATACCGGTAATGCACTTCTTAAGGAGCTTATAGGACTGACTA CCTTGCTGATGTTATTGAAGCACACATTCAGAGTATTGTCCTTGCAACCG AAGAAACTACGGTGGCACAACGAGTCAGCTAGACTCGTAGACCTATCAAA TGCAAATCCCGCTCGTGGTCACAAAGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1257:103049..111375+

>mRNA_F-serratus_M_contig1257.1915.1 ID=mRNA_F-serratus_M_contig1257.1915.1|Name=mRNA_F-serratus_M_contig1257.1915.1|organism=Fucus serratus male|type=CDS|length=2172bp|location=Sequence derived from alignment at F-serratus_M_contig1257:103049..111375+ (Fucus serratus male)
ATGGACGAACGGGTCGTGGACGTCGCTGAAACTTTTGGTTACACAGAGGG
TCCTCTTAGGGTGTCGTATAACTCGCGAGATCTCTTGATTTATGCGCTCG
GGATCGGTTGCTGCGGCAGGGATGACGGTCAGCCTGGAGACGCTGATATG
CGTTACCTGTATGAGGGACACCCGAACTTTAGCGCATTTCCTACCTACCC
ACTTGTGCTACCCTGCAAAGGAACTTCATCGGATGTGGTGCCTTTCCCAG
ATGGACGAACGGGTCGTGGACGTCGCTGAAACTTTTGGTTACACAGAGGG
TCCTCTTAGGGTGTCGTATAACTCGCGAGATCTCTTGATTTATGCGCTCG
GGATCGGTTGCTGCGGCAGGGATGACGGTCAGCCTGGAGACGCTGATATG
CGTTACCTGTATGAGGGACACCCGAACTTTAGCGCATTTCCTACCTACCC
ACTTGTGCTACCCTGCAAAGGAACTTCATCGGATGTGGTGCCTTTCCCAG
GGCCGACGCTGACGCTGCTGCCCACAGTCCTTCGCGACCGAGTGGACCCT
GGAGCAGTCCTCCACTACGACCAGTCGTTCGAAATTCAGCATTCCTTGGA
TCCCAAAGGGGCAGAGCTGGAGATGTGGGCCGACGCTGACGCTGCTGCCC
ACAGTCCTTCGCGACCGAGTGGACCCTGGAGCAGTCCTCCACTACGACCA
GTCGTTCGAAATTCAGCATTCCTTGGATCCCAAAGGGGCAGAGCTGGAGA
TGTGGTCCGAAGTGGTGGGTTTCTACCAGCGCCGGGGAGGCGTTTTGCTC
CGAACGAGAAATGTGATCACCGACCGAAGCGGGCGCGTGTACTGCAAAGC
CACCTCGGGAGTGTTCATCCGAGGTCTCAAGGTCCGAAGTGGTGGGTTTC
TACCAGCGCCGGGGAGGCGTTTTGCTCCGAACGAGAAATGTGATCACCGA
CCGAAGCGGGCGCGTGTACTGCAAAGCCACCTCGGGAGTGTTCATCCGAG
GTCTCAAGATCTCGAGCGACGCCGGACCGCCGCTGCCCCCGCGCCAGATA
CCCGCTCGTCCCGGATCCGTCCCCGACGCCTCCGTCAGCGTGACGGTTTC
GCGTGAACAGGTGCTGCTGTACCGCCTGTCAGGCGACTACAACGCCATAC
ACGCCGACTTCGAAGCCGCGCGGTCCGCGGGACTCGATAGCCCTATCCTT
CACGGTCTGTGCTCGCTAGATCTCGAGCGACGCCGGACCGCCGCTGCCCC
CGCGCCAGATACCCGCTCGTCCCGGATCCGTCCCCGACGCCTCCGTCAGC
GTGACGGTTTCGCGTGAACAGGTGCTGCTGTACCGCCTGTCAGGCGACTA
CAACGCCATACACGCCGACTTCGAAGCCGCGCGGTCCGCGGGACTCGATA
GCCCTATCCTTCACGGTCTGTGCTCGCTAGGAATAGCCGCACTACAAGTC
CTGCGCTGCTTCTGCGAAAGCGATCCGAGTCGACTCAAGTCTTTGTACTG
CCGATTCTCGCGACCCGTCAGACTGGGGGATGAACTCGAGGAATAGCCGC
ACTACAAGTCCTGCGCTGCTTCTGCGAAAGCGATCCGAGTCGACTCAAGT
CTTTGTACTGCCGATTCTCGCGACCCGTCAGACTGGGGGATGAACTCGAG
GTCAGGATGTGGAAGAGAGTCTATGATGAGGAAGGCGGTGCTCCACTTGG
AGTCAAGGGGTGCTATCAAAATGCGCGCGATGATCACGAGACTGCACGAC
CACGAGCTGCATCTCACGACGACCGTGGGGCGATATCCTCAGAGGTTTGC
CGAGTTAGGTTCGCTGTGTTTCCTAAAGCGATTGGCGGCCCTAGTGTGGT
GCTGGACGGAAGCGCCCTCGTCGCGCGTCGCGGAGAAGAGTTTTCACGGT
CAAGATTGTAAGTCAGGATGTGGAAGAGAGTCTATGATGAGGAAGGCGGT
GCTCCACTTGGAGTCAAGGGGTGCTATCAAAATGCGCGCGATGATCACGA
GACTGCACGACCACGAGCTGCATCTCACGACGACCGTGGGGCGATATCCT
CAGAGGTTTGCCGAGTTAGGTTCGCTGTGTTTCCTAAAGCGATTGGCGGC
CCTAGTGTGGTGCTGGACGGAAGCGCCCTCGTCGCGCGTCGCGGAGAAGA
GTTTTCACGGTCAAGATTGTAA
back to top