mRNA_F-serratus_M_contig1255.1908.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1255.1908.1
Unique NamemRNA_F-serratus_M_contig1255.1908.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1255.1908.1 vs. uniprot
Match: A0A6H5KXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU8_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 3.810e-42
Identity = 74/109 (67.89%), Postives = 86/109 (78.90%), Query Frame = 1
Query:  268 EASGAASRSDLRKMKQGFERSMDSGRVMDYVKELRERKRLLLSRLEETGGIITDDIYPIMEELALVNPSGGCGQGSDKGRDHYNAMLLGHWISASTIIATVPYVYGEGE 594
            E  G A R DL  MK+ FE +MD+  +M+YV ELR RK LLLS LEETGG+ITDDIYPIMEELALVNPS GCG G D+G+ HY AML GHWI+ASTI+  VP+VYG+GE
Sbjct:   66 EGDGGAGRPDLASMKRSFEGTMDNKLIMEYVTELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDQGKSHYCAMLPGHWIAASTIVPNVPFVYGDGE 174          
BLAST of mRNA_F-serratus_M_contig1255.1908.1 vs. uniprot
Match: D7G1F7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F7_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.010e-36
Identity = 64/88 (72.73%), Postives = 73/88 (82.95%), Query Frame = 1
Query:  331 MDSGRVMDYVKELRERKRLLLSRLEETGGIITDDIYPIMEELALVNPSGGCGQGSDKGRDHYNAMLLGHWISASTIIATVPYVYGEGE 594
            MD+  +M+YV ELR RK LLLS LEETGG+ITDDIYPIMEELALVNPS GCG G D G+ HY AML GHWI+ASTI+  VP+VYG+GE
Sbjct:    1 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGE 88          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1255.1908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXU8_9PHAE3.810e-4267.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1F7_ECTSI2.010e-3672.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1255contigF-serratus_M_contig1255:150273..163126 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size615
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1255.1908.1prot_F-serratus_M_contig1255.1908.1Fucus serratus malepolypeptideF-serratus_M_contig1255 150274..163126 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929179.176383-CDS-F-serratus_M_contig1255:150273..1503531622929179.176383-CDS-F-serratus_M_contig1255:150273..150353Fucus serratus maleCDSF-serratus_M_contig1255 150274..150353 -
1690962739.0283267-CDS-F-serratus_M_contig1255:150273..1503531690962739.0283267-CDS-F-serratus_M_contig1255:150273..150353Fucus serratus maleCDSF-serratus_M_contig1255 150274..150353 -
1622929179.1922414-CDS-F-serratus_M_contig1255:154258..1544271622929179.1922414-CDS-F-serratus_M_contig1255:154258..154427Fucus serratus maleCDSF-serratus_M_contig1255 154259..154427 -
1690962739.0370274-CDS-F-serratus_M_contig1255:154258..1544271690962739.0370274-CDS-F-serratus_M_contig1255:154258..154427Fucus serratus maleCDSF-serratus_M_contig1255 154259..154427 -
1622929179.2022865-CDS-F-serratus_M_contig1255:162763..1631261622929179.2022865-CDS-F-serratus_M_contig1255:162763..163126Fucus serratus maleCDSF-serratus_M_contig1255 162764..163126 -
1690962739.0453224-CDS-F-serratus_M_contig1255:162763..1631261690962739.0453224-CDS-F-serratus_M_contig1255:162763..163126Fucus serratus maleCDSF-serratus_M_contig1255 162764..163126 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1255.1908.1

>prot_F-serratus_M_contig1255.1908.1 ID=prot_F-serratus_M_contig1255.1908.1|Name=mRNA_F-serratus_M_contig1255.1908.1|organism=Fucus serratus male|type=polypeptide|length=204bp
GGHDTQLSLDRTLTNADTLRGSGKRYGSKSIVRDRFQPFSRGGCRSMAAL
QHLCLKESRSAAGRQGGLACKKSRLRSKASPSTLLKAVEEASGAASRSDL
RKMKQGFERSMDSGRVMDYVKELRERKRLLLSRLEETGGIITDDIYPIME
ELALVNPSGGCGQGSDKGRDHYNAMLLGHWISASTIIATVPYVYGEGEPG
PSST
back to top

mRNA from alignment at F-serratus_M_contig1255:150273..163126-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1255.1908.1 ID=mRNA_F-serratus_M_contig1255.1908.1|Name=mRNA_F-serratus_M_contig1255.1908.1|organism=Fucus serratus male|type=mRNA|length=12854bp|location=Sequence derived from alignment at F-serratus_M_contig1255:150273..163126- (Fucus serratus male)
GGTGGGCATGACACGCAACTTTCGTTGGATCGCACTTTGACCAACGCTGA TACATTGCGCGGCTCTGGCAAACGATATGGCTCCAAGTCGATCGTTCGCG ATCGTTTTCAGCCTTTCTCTCGTGGCGGTTGCCGAAGCATGGCTGCCTTG CAACACTTGTGTCTCAAGGAAAGCAGGAGTGCAGCTGGCCGACAAGGCGG ACTCGCGTGCAAGAAGAGCCGTCTCCGGAGTAAAGCGTCACCCTCCACGC TGCTGAAGGCTGTGGAGGAGGCAAGCGGGGCTGCGAGTAGGTCTGATCTC AGAAAGATGAAGCAAGGATTCGAGCGCTCGATGGACAGCGGGAGGGTCAT GGATTATGTGAAGGCAAGTCTTGATAGCACATAGCAAACCTCACCAAATT AGACTGTATATATACAGACAACAGTACTACTTGTGCAGCACTCAATCGGT ACGAACTACAGCAGTAGTATCGGCAGACTAGAGGACTCATTTAGTGCAAA GTTCAAGAATCATACGTGACGCATCGCTTCGATTGCTCATCGCCGGTGGC GAGCAGATATGTGTCGGCCAGCAACAAGGTAGTCGGAGTCGTCGTGGTCA TTTTCTGGCTTTCGTTATACCTTGTTGTACTAGTCCTGTAGCTCTGATAG ATGTGCTTCCCTCTGAGAAGCGTTCATTCATGTCACAGGTGTTGGATCTG AAGAATCAAGTGTAGAGCTAGCATACCAGGTATGCCCGTAGCTCTGCCAT GTCTTTCAAGTACACACAAGTACCTGGGGCAGATAACCGGATAATATACT TTCTGTACAAGGTATCGCACATCCCTACTATTAATAACAAGTACCAGGTA CAGTAGATCGTGTTGGTGTAGGGAAAGAGAGGTGCACGAAAAGTGGTTTA TGGTGATACCTGAAAAGGCAGCACCCGTTACTGGAACTACCTCGAGGACT ACTGGCCCTGTGCCGACGGACTCTCGGCAGTGAGCGCCATCGGTGCGCAA TTGCGTGACCTGATCGACTCGGGACTGTCCCGATGGCGGTTGGTGATATA AATAACCAATGGACACCGCGGCGGAAAGCGGGGGGAATCCGGTGAGTAAG CACCCGATTCAGCCTGAGTGTGGATAAGGAGCAGGCTGACGCAGGACGTG ACGGCGGAACCTATCTCGCGAGACCAAATTTTCAGGCGCGAACGGGGACA GGGAAATATCCATTACCACCCTGTTCAGCTGACCACGAGCAGGACCGGCA ACCTGCCCCGGTTGATCCATACTCTGCTAATGTTAGGGATGGCCATACAT ACAAACATACCTGGTACATGTATAGAGCTACATCGATTCTCTCGGCGGTA ACACCATCGATACGCAATTGCGTGACCTGATAAACTTGGGGCTAGCCTGA TGGTAGTACAGCTGTTGCCGGTTCGTATGGACGCCTTATTAAAAGTATTA CAGTAATAGTACCGTATTAGTAATCGATGAAAACGGGAGCCCGTTCAGTA GGCACCATATTGAACGGGCTGACGCGGGACGGGGCAGCCGAACCTGTCTC GCGAGACCAAATGAACGGGGCAAAAAAAACATTTTCCCTGACTTGTAAGA AGGATTGACAACCTTACACGGTCGGTGACCAATCTTCTGAACGTGAGAAA CATACCATTAATAAACACTAAAACTAACCACTAACACTAAACACTAAACG CTACAGTACCTGGTAAACACTAAACATCAACACGAAACACGAAACACTAC AGTACCTGGTAAATATTAACACTAAACTCTTAAGGCTGTAGTCTAGACGG TAGGAGGTTTGCTCGCCTCGAGGCGTGTTTTTTGCTGGTTACCGTTCGTT TTTTTCTGTTCCTGGACGACGAACTCAGACAAAAACACGCGAATAAAAAT AAATCTCGCGAGGATTGCTGGAAATATGTACCTGGTATAAAATAGTGTGC AGCAGTAGGAGTGCCCGGGTACAGAGCACGGACTCGCGTAAGGTGCATCC ACAGCGAACCATCGCGGAAGGAGAAGAGATCCCCGAAGCGTGCCCGCAAC AAAAAGCCTATGTTCCCACCTGAACGTTTTGACATTTCCCCCCTGACTGC GGGAAGCTCAGAAGGTCTAGGCGCGTTCTAGTTTTTCTATAAAAACCCGA AGGTGCCCCGGTAAATAGGCTCACCGTAGAAAATCTGTTGTTTCTCAAAA CATAATAAATACTGGTACTCCGTTTTACTCATGGTCCCGGGTTACACAAT ACAAAATATGTTGTGTTTCAAAACATAATTACCGATGATGTACTGCCGTG GAACCTTGTTCCTGTACAAAAATGTTTACAGTCTAATATATAGACGAGAA AATATGTTGTGTGTCAAAACGTAGCCACTGCTGTACCGGTACTACTGAAG CAACCTGAAGTAGTTGTAGAAAAAACGTGTAAGTTATACTAGTATACACT GCATTGCAAATTTCTTTCAAATTTCAATCCCGGACAATCTAACCTCTTTG TACCTATCAATACCGACGAGAAGGGAACATGAAAAACACAATACTGGCAC AGCCATACGGACAGCCAAGAGCGGTTTCTAACGCACGTGCGTACAATTTG TCCAGGCGGCAGACAATATGCACGCGACGCGGCGATGCAGCTGCTGTGTA TTATCGCTGTCTGTACCTACAATTTGAGGTCATATGATATATAATATGTA TACAAACAGCAGACAAGGCGAGGGTAAAAACACCTTCAACTATACACATG TACTATTAATAGTATTGTAGTTACAAATACCTGTGACTCCAAACAAACAA CAGGTATATTTAAAGCTGGAAAAACTGATATTTTACATATGCGGTATCGC AAAATTCAAGCCCGGCGAGCTGGAGATAACGCATTGCCATACCATAAATG GGTCGAGCCGGATGTAAGGTATCTTTCTTATTGAGGGCGTAAGAGTCGTT AGCGAGAGGATTGCCCCTGTTTGGCGGGTCAAAGATGACCACTTCGGGTC CCGGATGGACCAACTGCGGCATAAGACGTTATTTTGACAAAAATGTCGAC CGTGCCTGCTGTACAGCATTTTTGAAGCTCGTTGTTCTTCAGGCACAACG ACAATACCTCAAGGGTTCGATATACCACTGCTGTGGGGGTTCAGGGGACA TGTGGCGCAGGTGAATGCTGTTTTGGGGGAACCCGTACAGGATGCGGAGC AATTGGGAGTTTTTTTGTCTTCAGGTAACAGTAGCAAATTTTGGTGAGTT TTGTGATCACAAAGGTCAATTTTTATCCGGCCATGCCACACCCGCGAAGG AGATAGGAACGTGAATCCCCAGAGTATTGTACTAGGTTCAATATTCTGCC TTCACAATGCACTATCTCCACGCCGCATAGCTTCAAAAGGCGCTCTACAG GTTGAGTGCAAGATTCCCTCCAATTTGAGGTTCAGCCGCAAGGGCTGATT TTTCCGACGACGAATTTGAGCGACACAGGGCATGTTCAAGCATAAAAACT TCAGCCGACGAGCCCTCTGATGTACCTTCACACGCACGCACCTTCAGGGG CCCCGGGCTGTTGATTTGAGCAAGCACCCTCCCCAGCTGTGTTCGCGCGC GCCGCGAGCCAGCATGTTTGTGGGCATATGGTGGCTCCCAATTGGTACAG ACATTGTACCGCATGAAATTGTTTTTATAATAAATTTGAAACAAGTTTGT TGAATGGTTGAAAAGCGGGGGTCCGGGGATTTTTTCACTAGACTACAGCC TTAACACTAAACTCTTACACTAAACTCTTACACTGAACACGAACACTAAA CGCTGAACATTAAACACTTCGTAACAGGTATCATAGATCCTCCTTCGGGA GGACCGGTTCTATAATATAATAGTATAACAGCATAGAATGACTATGACAG ATGGGTAATAGCATGACAGGGAAGGGAAAGATGGCGCGGTTATGTCCAAC CCCCCATGGTCACCGGATGTTGATGTACTTGTGTTTATTATACCTGTTGT CCTTATTAAGAATACTGGTATGAACTATCGAAATATCTTACAGACAAGGC ATGAACAAATAGCTCAAACGTGACTCTAATTACGGGAACCCAACTAAATC CTATCTGGCGTTCAAGCGCTAACAGCCAAATTTCTTTTCCTAGCGTGCTG TAAAAAATGTTGGCAGGGTTCTTGCCTTTACCTATACTTTTCCATTTCCG TGAACCCGGTCGCCCCGGTAGCTCAGAGGTAACCTCGTAACCTTCTGACA CGTTGGGACGTGAGTTCGATCCCGGCAAACGATATGTTTCTCACTAAAAT CTAAAAACTAAAATAGAAATGCCCAACGAGTGGAGAACGATTAAATCGTA AGTACACAAAATTCGACTTCGCGGTCGACGAAGGAAACGAACGGCTGAAT CCTTCTCGCGATAAAAATTAAGGCACGTACCGCAGAAGGAGGGTTGATGA GAAATCCTGTGTGACCTTCCTCCTGTGTGGCCCCGGCTGGTACGTCCAAT GAACTTGATGTCCAGAATAAATGTAAAGAAAACAGACACACACACGTTGA GGTTTCAAGTGTTCGAAGGGGTCTTTTCCAATATCTCTATGTTTTTTTTT ATGTTTTTGTAATGTTTCCCCGATCGGTCTTGGTTTTACATCTAAAAACG CATTTACAACTTTTGGGGGCCACATTCCCGCCAAAAATCAGATTCCGCAC AACAAGTCGAAGGAAAGGCGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC TGCCTTCCTATGTATGGCATATTGGCATATTGCCATCGGAAAGAGCGTAA TATGCGACCTGGTGTTGTTTTGGTGTTGTTTTGGTGTTTTGGTGTTGTTG TTGGTGTTGTTCGGAGAAATAACGGCAAGAGACTGCTTACTTGCGACTGA CATTACTGAGGCACGCTGTCGCTACGGAGTTGGCAGTATCACCGAAGCTT CACCCGCGGTTGTTGAGCGCGTGCGCTAGGCAGCCATGACAAATGCGTTA TGGGACCACAGCTCAAGGGATATGGACCCACAGCTCAAGACATAAACCAA CAGATCAACATAGATGTAAAATTCGCCATCTCTAGTTGTTGGTGCACTGC AGACGAATGAAACACCGCTGAAACATCACAGTAAAGATGACTCGTCTCTC TTTCTGTACAGTAGCACTATGAATAGTATTGTTGGTGGCATGTTTGTACA GTATATGCATGTATAGTATAGTAGAGTAGAGTATAACATTGGTAAGAGGC GTCAGCGATTCGTGAGCTCACACGAGATGGAATTTGGGAATTTTCTTCCA CAACTTTTTTTTGTATGGGCTCGCTCTATTGTGGGGATATAGTATGGTAT AGTAAAATTATAGTATAGTATAGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTATTAATTAAATTGCACATAACCGCGTAATCCGGCCCTGTCATCCTAGT CATTCTATGCCACTCGCATTGATCCTCCCGAGGGGGGATCAATGATACTT ATTACAAAAACCTCTGATCAGAGTGTGTGTGTGTGTGTTTTCTTCCCATC TATTCTGGTCAACGGACGTACCAGCCGGGGTCACACGGGAGGAAGGTCAC ACAGGATTTCTAACCCACCTTCCCTCTGCGGTGCGTGCCTTAATTTTTAT CGCGAGAAGGATTCAGCCATTCCTTTACCTCGTCGGCCTTTTGTGTACTA ACGAATTAATCGTTCTCCACCCGTTGGGCATTTTTATTTTAGTTTTTTTG TTTTTAGTGAGAAAAATCCCGTTTGCCGGGATCGAACTCACGTCCCAACG TGTCAGAGGGGAACGAGGTACCTCTGAGCTGCCGGGGCGACCGGCAGTAT AGTATAGTAAAGACCGAAGAGCATAAAATGAGGGCGCACGTATAATACAC GATTTATAGATGCATTCATAGAAAATGCCGCAAAATATCGAAAAAATAAT GGAAAGAGCCTACCGGGATAAGACAAGAAACAAGCCCTACAACATCGTCA TACTTTACTTCTCTTCGTCTAATATCCCCACCCAACATCTTTACTAAACC CCGACGACCCCCAACATTATACACAGTCAGTATTTACCAGACCCAAGCAC GAACAAACGTCCACCCTCCCAAACATGGGGTTTTGTCCTCCAGCAATGAA GCTCGTTTTCGGAGTCCGTACCATAGCTGCAGCAGCCATCTCCAAGAAAA AAGGAATAAAAAAACTGGAACGTGCAAGCAGTAGACAGCCACCGTTAGTA TGCATGTATATATAGTATGTATTTATGTATTGTATGTGTTTGAAGAAAAT ACAGAACGCACCTAGACCTTTTTGTATGATCATTACATATAGTAGAGTAT GGATCAACCGGGCAAGGTTGCCAGTCCTGCTCGTGGTCAGCGGAGCAGGG AAAACGAACATTTCCCTGCCACCCCGTCCCGCGTTAGCCCACTCATTCCC CACGCCAAGGCTGTGTAGTATATCAGCAGCACAGAACAATGAGAGAGGGA TGGGTATTTTTCGGGTCACCGATTTACCGAACAGTATCATACTAAAAAAG CTCTCCTCAACATACCTGACGGGGCAAGGGGTGCGTAAGGACAGGTGCGC CACAGTACCCTACCATACCCTTAGCTTACTTCTTTCGCTTCGTTCCTTCA CTAACTTGGGGGGGCACCATCATGCTACCGTTACCGTTACCGCGAAAGCC CGGACATCTCCACAAGGGACCGCCAGCCAGGCAGCGCCCGTGCGATGCTG GATGCACCCGTATCAGGCCGAAATACCTACTGGTAGTAATTATAGTCTGC GCGAGCTGTGCTCGTGCGACCAACCGAATTTCAGACTTTCCCCTGCAGCT ATAGGAGGCCGAGGAGATCGAGTCCTCGACAGCTACTGTATACTACTGTA TACTATAATACTGTTGTACGGTACGGTATGGTATGGTACGGATGGGATGG GGTGTAGGGCATGGACCCTCTTCCAGGATCACTGTTATACTACATACTAC ATACTACATATTACATACCACAGCAGCAAAGTAATATTGTAATATTGTCC TTACCTTCCACCGCGGGGTCTTTACCTCTCATCGTCACTATCGGGGGGAA AGAAACAGCGCAAGAGGCCGAATCCCCCGGACGACTTCCTACAACCGTGC TCCCAAGATACCGTAGTGTGACAGAGCTCAGAGACAACCGTAGGCACAGG GAGAAAAGAAGAGAAGAGAAAAGAAGAGAAAAGACTTTGGCGGGCGGGTG GGGGGTGGGCTCATCCCCTTGATGAAAACGATTGATGTAAGTTGCCGTCA AAGCGAATATTAATAGTAATATTATTTGTAATATTATTTGTTAGTAATAT TATTTGAGTAATAGTATTCGTTAGTAATATTATTTTAGTAATATTATTTG TTAGCAATATTATTTTAGTAATAGTAATAGTATAGTAATATTACTAGGGA CGGAGGGGGGGGGGGGGGTCGAGGCCGTGTGGTAGTAGTGTATGAAATAT CATGTGCACGTGTGTTTTTGTACACTGTATTTAAAGCAGTACTCTTGTCT TATACCGTCGTAATAGTTATTCATAGTACAGTGAGACTTTTTTTGTTTAG TTTATTTATTTTTTTATTAACTTTTTTCCCGTTTTCTCGATTTGGCATAT TTCGTTCCCCTAATTTCATTGTTTGTTTTTTTCTGACCAGAGACAGTCGT AGTCGATTCACAGTATCGCCGTTGCTTTCAACATGCCCACTTCATAACCA ATAGTGGGTGTGGGAAAGAAAGGCGTATATTAATTGGTCCATAGTGACCT GCGAAGGCAGCACTCGTTCGAAACTACCTTGAGGTATGCTGGCCCTGTGC CGGCGGATTCTCGGCAGTGAACGCCATCGGTACGCAAATGCGTGACCCGA TTTACTCGGGACTGACCCGATGGCGTATGGCGGTTTAATATTATTATATG GACGCCGCCGCGGAACTCGGGAGGAATCCGTAAGTAAGCACCAGATTCAG CCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAACCG TCTCGCGAGACCAAATTCCCAGGCGCGAACGCGGACAGGGGAATATTATT TTCTCTGTTTAGCTGACCACGAGCAGGATTGGCAACCTTAACAGGTTGAT CCATACTCTTGCTATATGTGTGACCATACATAGTATGTATGTATGCATGG TCATCACTTATAGCAGAGTACGGACCGGCTTTTTTATTGGTCCGACGAAA GACTTTAAAATGAAATAAAAACGGTGCTGGTCTCAAATCGGCGGCCAGCA AAATCAAACGATAGCGCTCTACAGCAGTAGAGTCGATGAAGCTCTCTGTA ATTAAGTCTACTATTAAATCGTATATACAGTAGTATCCCACAAGTGCTTT TTTTTCATGGTATTTTATTTTTCAACTTTTGCCTCATCACACATCACATG ACACATTACACATCACACAACCAAACGAACATTTCGACACAAATGTCGCC GACGGTATTTTGTATGGGATATAGTATACATGTATGGATGGGTGCTTGCA AGGTTTGGATGCGTTGAGTTCAGATTTTTTTCCTAAACTCACCGAAAAAT ATGTCTACAAAAGTTAAATGGTATTCGTAACATCCTCACCCCTCCCCTCC CCCTCCCCTCCCCCCTCCCCTCCCCCTCCCTCCCTTCCTCCAATGTTAGG AACTCCGAGAGCGCAAGCGGCTGCTGCTGTCTCGGCTGGAAGAGACCGGA GGCATCATCACTGACGACATCTACCCCATCATGGAGGAGCTCGCGCTCGT GAACCCCTCCGGCGGATGCGGGCAAGGTTCGGACAAGGGGAGGGATCATT ACAACGCTATGCTCCTAGGTGGGTAGGGGCTGGGGGTGTCGTGTTTTGAA ATATAGGATCATTCAACCGGCGGTCCAAATATTTTGTGATTTGCGTGCTG GCTTTACTCGAGACATTTTACAGCAGCAGTAGATCAGTACTTTTATTTAC GGGTAATAGTTTATAATAGTGCACTCCACTTGCAGTACGTACATAAATAA TTTAATATTACTGTATAGTGAACGGGATTCATTCGCGACATGCAGTCTCG GGGCAGTAATTGCTTGTGTAGTATTTTATAAGTATACTGTAGAGAGCTAA CGAGCTTCCGTATAATAGTAGTATTAATAGTAATAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAAAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAATAATAATAATAATATATAGTATACAGTATTTAG TATATAGTATGTATGTATGGTCACACATATAGCAAGAGTATGGATCAACC TCGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTAAACAGGGAAAATAATA TTCCCCTGTCCGCGTTCGTGCCTGAGAATTTGATCTTGCGAGACGGTTTC GGCAGTTCTGGCTACAGTACGGCACTCTCTATCTTTCTCTCTAACAACCT TCTCTGAAAGGCCTGGTGTAACGATATGTTCCCCTCTGCAAGGGCGTTGG TAGAGAATAAGAGGCCTTACAACGCGACATACCAGTAAAAAAGACTATAT TAATAGTAGCATCTAAAAGGCCTTAGTCTACATCAAGAACTTACTGTTGT GATTTTTATGGGGCGTGTAGTGTAAAATCCGCCAGGTCTCCAGGTAGGGC CTACGAGTAAGCCCAAAATCCTCCAGATATGCGATCGAACCTGATTGCTC CTCGCATGCAAGAGTCGGACCCTAACTCCTTCCATTACACGATATGTCAT GTTATGTAATGTAATATGTTATGTTTTGTTTTGTTTGTTCAGTGTATGCG AAAATATATAATATGTAGGGGCCTCCGGGTATGAACTGTATATATGGTCA GCACTTCCAGCAGAGTATGGATCAACCGGGTACGGTTGCCAAACCTGCTT GTGATCAGCTGAACAGGGAATAAATTTATATTTTTTCCATGTCCCCTCTT GCGCCTGAAAATTTGGTCTCGCGAGATGGTTTTGGCCGTCCCATCCCGCG TCAGCGCGCTTACTTATGGGATTCCTCCCAGTTTCCGCGGCGGCGTCCAT TTATTTATTTAAACCGCCATACGCGCCACAGGGTCAGTCCCGAGTTTATC GGGACACGCAACTGCGTACTTATCGGAACACACAATTGCGCACCGATGGC GTTCACTACCGAGAGTCCGCCGGCGCAGGGCCACTAGTCCTATTCCTCAG GGTAGTTCCAATAACGGGTTTTGTGCTGATCACCACCATCGGGACCAATT TTTGGTATTTTTTCATCATGTCAAACATGTAGCCGAAGACCCTCTCTCTC TATAAATAATATATATAGTATGTATATATACATATTCATCTTACTTATTG ATAGTATATAGTATAGCCGATGGGCCCCAACGTGGCCATCCTGCTAATAC TGTACTGTAGTGTGGTGTACTGTACTGTACCTGTGGTCACTAGATAAGGA TCTTTCATCTTTCATCTTCCCATCTCTCCCCGGTTCACGCCTTAGGATTT TCATCGCGATGCAAATTCAGCACTCTTACAACTCGTCAACCAATGGTTGA ATTTATTTTACTTGCTGCTCACGTTCTCACGCTTTCCGCTACGGAAGAAA GAAAGAACACAAATTATGGTGGTAAGAATCGAACTCACGACTTCCGCACT ATAATACTAGCAGGTGTCCAGTACAGGTTATTAATACCTACTATTAATAG ACCAAAATGTACTACCGAAGATGATTGTGTATGGTGTCGAATCCATGACT CTACTATACTACTGCTGTGTTTTTTTCCCCTCTCGGCCATTAACGCGATG CATAGTCTAGAGGTTCAACTTTTTTGGTGTTATAAGAGGGTTTCCGACCA AGTTAGTGGCGTTTGTTGCTGGGAGCTTCTTGTTTTCCTTTTCAATGGAC GAGATATCCTGCAAATACTCTCTTCTTCAGAAGCCGCCGCCGCTGACGAT TCAAAGGCACTCCCAGCTATCCACACCTGGTACGTCCGGTTTGCCGTTAA ATATTTTTCGAGATATTAACAAGTGTGAAAGAGGAGTTCAACGATTGGGG AGGGCGGGGATACGACGATTTCGTCCACGGGGATGTCACCAAAACAGCCC CTTCCGGGGATGAGACTACATGATCCCTACATGGTAGGCAAGCTTGCCCC GAACTCATCGTATTTGATCAGGGGTTTGGTCAACTATGTCCCCGGTAGAG CTATTTTCGTGCCGTTCCCTCTCAAAACGGGGACAAAAATGTTGCATCCC CGCCCCCCCCAAACGTTGAACTGGTCGAAAAGCAAAGTCCACCAAGACAT TAATTCCTCTACCTCCTTTATTTTTCACTTGTTATTAATGTCTTATAGGG GGAGGGTGAACATAAACAACTTCGTACGTTTTAGTATAGCGAAGACTAGA GAGTATGTTCGTATGGTATGTATTAGTATGTATGTTCGTATGTATGTTCG TATGTATATGTATGTATATGTATGTATCAATATATACTAGTATACATGTA TGTATATATGTATGCAGACTATGTATGTATGCATGTATGTACATGTATGT ATGTATGTATGTATGTATTTATGTATATATGTATGTATGTATGTATGTAT GTATGTATGTATATTTATTGTATGTATGTATGTATGTATGTATGTTTGTA TGGTCATCACGTAGAGCGGAGTATGGATCAACCGGGTAAAGTTGCCAACC CTGCTGCTCTTGGTGAGCTGAACCATCAACAGGAACTATTCGTAGAACCA TTAATAGGAAAATAGTATTTCCGCTGTCTCGGTTCCGTTCCTCTAGAACC AACACGACAAAAAGTTTCCTTAAAGACTACCGGTAAATACTAAAGACTTG CTGTTCATGATTTGTTTCTTTTTAAGTGCTCAATTCAAAACCAGGCGTTT TGTGTGCTCCAAAAGGTGTATAACCCCGTGTGCAGGCGGTATATAACTCC AAAAATGTCGGTATATAACAAGAGTTATACAAAGTTTGCGAGATATTTTC CTGCCAAAGACTCTCCCAATCCCCACCCCCCTTCCTCATTCTCTTCCCTC CCGCATATCTCTACGAAACCCAGGGCACTGGATATCGGCGTCCACCATCA TCGCGACCGTGCCCTACGTCTACGGTGAAGGCGAACCCGGCCCTTCCTCC ACCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1255:150273..163126-

>mRNA_F-serratus_M_contig1255.1908.1 ID=mRNA_F-serratus_M_contig1255.1908.1|Name=mRNA_F-serratus_M_contig1255.1908.1|organism=Fucus serratus male|type=CDS|length=1224bp|location=Sequence derived from alignment at F-serratus_M_contig1255:150273..163126- (Fucus serratus male)
GGTGGGCATGACACGCAACTTTCGTTGGATCGCACTTTGACCAACGCTGA
TACATTGCGCGGCTCTGGCAAACGATATGGCTCCAAGTCGATCGTTCGCG
ATCGTTTTCAGCCTTTCTCTCGTGGCGGTTGCCGAAGCATGGCTGCCTTG
CAACACTTGTGTCTCAAGGAAAGCAGGAGTGCAGCTGGCCGACAAGGCGG
ACTCGCGTGCAAGAAGAGCCGTCTCCGGAGTAAAGCGTCACCCTCCACGC
TGCTGAAGGCTGTGGAGGAGGCAAGCGGGGCTGCGAGTAGGTCTGATCTC
AGAAAGATGAAGCAAGGATTCGAGCGCTCGATGGACAGCGGGAGGGTCAT
GGATTATGTGAAGGGTGGGCATGACACGCAACTTTCGTTGGATCGCACTT
TGACCAACGCTGATACATTGCGCGGCTCTGGCAAACGATATGGCTCCAAG
TCGATCGTTCGCGATCGTTTTCAGCCTTTCTCTCGTGGCGGTTGCCGAAG
CATGGCTGCCTTGCAACACTTGTGTCTCAAGGAAAGCAGGAGTGCAGCTG
GCCGACAAGGCGGACTCGCGTGCAAGAAGAGCCGTCTCCGGAGTAAAGCG
TCACCCTCCACGCTGCTGAAGGCTGTGGAGGAGGCAAGCGGGGCTGCGAG
TAGGTCTGATCTCAGAAAGATGAAGCAAGGATTCGAGCGCTCGATGGACA
GCGGGAGGGTCATGGATTATGTGAAGGAACTCCGAGAGCGCAAGCGGCTG
CTGCTGTCTCGGCTGGAAGAGACCGGAGGCATCATCACTGACGACATCTA
CCCCATCATGGAGGAGCTCGCGCTCGTGAACCCCTCCGGCGGATGCGGGC
AAGGTTCGGACAAGGGGAGGGATCATTACAACGCTATGCTCCTAGGAACT
CCGAGAGCGCAAGCGGCTGCTGCTGTCTCGGCTGGAAGAGACCGGAGGCA
TCATCACTGACGACATCTACCCCATCATGGAGGAGCTCGCGCTCGTGAAC
CCCTCCGGCGGATGCGGGCAAGGTTCGGACAAGGGGAGGGATCATTACAA
CGCTATGCTCCTAGGGCACTGGATATCGGCGTCCACCATCATCGCGACCG
TGCCCTACGTCTACGGTGAAGGCGAACCCGGCCCTTCCTCCACCGGCACT
GGATATCGGCGTCCACCATCATCGCGACCGTGCCCTACGTCTACGGTGAA
GGCGAACCCGGCCCTTCCTCCACC
back to top