mRNA_F-serratus_M_contig1252.1904.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: A0A2W4PM64_9PROT (Bifunctional protein FolD n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4PM64_9PROT) HSP 1 Score: 221 bits (564), Expect = 1.930e-64 Identity = 132/301 (43.85%), Postives = 183/301 (60.80%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFE 965
++GK + +R+ +K R+ ++ A + RVPGL +V+ P S IYV K +A +A GM++ ++P +TA + +VLA V ALN P IDGI+VQLP+P +DS V +IAV KD D NP N G QR PCTP+G + +L G+ G +AVV+G+S +VG P A L GATVT C H+ L VR A++VV+ GK VKG W++PGAVV+DV +N + KVVGDVE++AA+ +AS+ITPVPGGVGPMT+A+L+QNTL +E
Sbjct: 6 IDGKAIALKLREDIKARVDALKAAGR-RVPGLAVVIVGNDPASQIYVRNKHQATEAAGMLSVKKELP-----ATATQEEVLAVVQALNADPAIDGILVQLPVPKQIDSKAVIDAIAVEKDVDGFNPQNL-------------GLLAQRTPRLRPCTPYGCMKMLEYSGIDPAGMDAVVLGQSNIVGRPAALELLMKGATVTIC--HSRTKNLADHVRRADLVVAGIGKPEFVKGEWIKPGAVVLDVGINRLP-----SGKVVGDVEFEAAKERASWITPVPGGVGPMTIAMLIQNTLEAYE 280
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: I3CF79_9GAMM (Bifunctional protein FolD n=1 Tax=Beggiatoa alba B18LD TaxID=395493 RepID=I3CF79_9GAMM) HSP 1 Score: 212 bits (540), Expect = 3.730e-61 Identity = 130/304 (42.76%), Postives = 179/304 (58.88%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPL-PCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFEAS 971
L+GK + +RQQ+ R+ A+ + R PGL +++ P S +YV K +A + G +A D+P +T +A++LA + LN P +DGI+VQLPLP +D N V I HKD D +P N GR K L PCTP G++ LLA G+ +VGQNAVVIG+S +VG PMA L TVT C H+ L + R A+I+V A G+A LVKG W++ A+V+DV MN + K+VGDVE+ + +A+AS+ITPVPGGVGPMT+A LL+NTL + E S
Sbjct: 6 LDGKAVATELRQQMAKRVQQRLAQGR-RAPGLAVILVGENPASLVYVRNKRKACEELGFIAKDYDLP-----ATTTQAELLAILDQLNTDPSVDGILVQLPLPAHIDPNTVIERIVPHKDVDGFHPYNI--------------GRLALKMPLLRPCTPKGVMTLLAKTGIDLVGQNAVVIGQSNIVGRPMALELLAARCTVTIC--HSRTRDLIAQTRQADILVVAVGQAELVKGDWIKSNAIVIDVGMNRLS-----TGKLVGDVEFTSCQARASWITPVPGGVGPMTIASLLENTLEVAETS 282
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: H2IY08_RAHAC (Bifunctional protein FolD n=37 Tax=cellular organisms TaxID=131567 RepID=H2IY08_RAHAC) HSP 1 Score: 212 bits (539), Expect = 6.280e-61 Identity = 129/301 (42.86%), Postives = 173/301 (57.48%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFE 965
++GK ++ +R +V R+ A+ K R PGL +V+ P S IYV +K R+ + G ++ D+P +T E ++L + LN +IDGI+VQLPLP G+D+ KV I KD D +P N G QR + PCTP GIV LL +G+ G NAVVIG S +VG PM+ L G T T H L V NA++V+ A GK G + G W++PGA+V+DV +N + + GK VVGDVEYDAA +AS+ITPVPGGVGPMTVA L+QNTL E
Sbjct: 6 IDGKTIAQQVRSEVAARVQQRLAQGK-RAPGLAVVLVGENPASQIYVASKRRSCEEVGFISRSYDLP-----ATTTEGELLDLIEKLNNDSEIDGILVQLPLPAGIDNIKVLERIHPDKDVDGFHPYNV-------------GRLCQRAPTLRPCTPRGIVTLLERYGIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVT--HRFTKNLRHHVENADLVIVAVGKPGFIPGEWIKPGAIVIDVGINRL---ESGK--VVGDVEYDAAAERASFITPVPGGVGPMTVATLIQNTLQACE 280
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: A0A370QNW6_9GAMM (Bifunctional protein FolD n=1 Tax=Enterobacillus tribolii TaxID=1487935 RepID=A0A370QNW6_9GAMM) HSP 1 Score: 211 bits (538), Expect = 7.580e-61 Identity = 130/301 (43.19%), Postives = 175/301 (58.14%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFE 965
++GK+ ++ +R +V R+ A+ K R PGL +V+ P S IYV +K RA + G ++ D+P ST+ EAQ+L+ + LN P IDGI+VQLPLP G+D+ KV I+ KD D +P N G QR PCTP GI+ LL + + GQNAVV+G S +VG PMA G T T H L V A+++V A GK G + G W++PGAVV+DV +N + + GK VVGDVE+D+A +AS+ITPVPGGVGPMTVA L+QNTL E
Sbjct: 6 IDGKMIAQQVRNEVAARVQQRLAEGK-RAPGLAVVLVGENPASQIYVGSKRRACEEVGFISESYDLP----DSTS-EAQLLSLIDDLNNNPSIDGILVQLPLPAGIDNVKVLERISPDKDVDGFHPYNV-------------GRLCQRAPKLRPCTPRGIMTLLERYEIETYGQNAVVVGASNIVGRPMAMEFLLAGCTTTVT--HRFTQDLRHHVEGADLLVVAVGKPGFIPGEWIKPGAVVIDVGINRL---ESGK--VVGDVEFDSASQRASWITPVPGGVGPMTVATLIQNTLQACE 280
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: A0A2D4FLK1_MICCO (Methenyltetrahydrofolate cyclohydrolase (Fragment) n=2 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4FLK1_MICCO) HSP 1 Score: 215 bits (547), Expect = 8.250e-61 Identity = 129/314 (41.08%), Postives = 195/314 (62.10%), Query Frame = 3
Query: 24 THMVRETAIPALPL-NGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTG--VDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTI-GGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTL 953
T +VR A+P+ + +GK S +R+++K++++ + AK G PGL I+ R DS++Y+ K++AA G+ A + +P TA EA+VL + LNE P I G +VQLPL + +++ K+ ++A KD D + VNA + G F +PCTP G + L+ GV+V G+ AVVIG+S++VG PM +L ATVT C H+ +L +V A+I+V AAGKA +VKG W++PG+VV+D +N I T+ ++VVGDV Y +A+ +A+YITPVPGGVGPMTVA+L+Q+T+
Sbjct: 41 TAVVRRLAMPSAEIISGKTVSAQVRERLKNQVAEMKAKVPGFRPGLAILQVGDRDDSNLYISMKLKAAAEIGINANHIKLP-----GTATEAEVLKCINNLNEDPAIHGFIVQLPLDSNKPINTEKITNAVAPEKDVDGLSSVNAGKL---------SRGDLSNCF--IPCTPKGCMELIRQTGVQVAGKKAVVIGRSKIVGAPMHDLLLWNHATVTTC--HSKTASLADEVSKADILVVAAGKAEMVKGEWIKPGSVVIDCGINHIPDNTRASGKRVVGDVAYASAKERAAYITPVPGGVGPMTVAMLMQSTV 336
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: UPI002026DBB3 (C-1-tetrahydrofolate synthase, cytoplasmic n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026DBB3) HSP 1 Score: 217 bits (553), Expect = 1.100e-60 Identity = 127/304 (41.78%), Postives = 188/304 (61.84%), Query Frame = 3
Query: 51 PALPLNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTG--VDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTI-GGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTL 953
PA L+GK S +R+++K +++++ + G PGL I+ R DS++Y+ K++AA G+ A + +P +TA EA+VL + ALNE P I G +VQLPL + +++ K+ ++A KD D + +NA + R +PCTP G + L+ G++V G+ AVVIG+S++VG PM +L ATVT C H+ +L +V A I+V AAGKA +VKG W++PGAVV+D +N I T+ ++VVGDV Y AA+ KASYITPVPGGVGPMTVA+L+Q+T+
Sbjct: 3 PAEILSGKTVSAQVRERLKSQVATLKERVPGFRPGLAILQVGDRDDSNLYISMKLKAAAEIGINANHIKLP-----NTASEAEVLRCINALNEDPAIHGFIVQLPLDSNKPINTEKITNAVAPEKDVDGLSSINAGKL-----------SRGDLGDCFIPCTPKGCMELIRQTGIQVAGKRAVVIGRSKIVGAPMHDLLLWNHATVTTC--HSKTASLAEEVSKAEILVVAAGKAEMVKGEWIKPGAVVIDCGINHIPDSTKASGKRVVGDVAYKAAKEKASYITPVPGGVGPMTVAMLMQSTV 288
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: FOLD_ALIF1 (Bifunctional protein FolD n=24 Tax=Aliivibrio TaxID=511678 RepID=FOLD_ALIF1) HSP 1 Score: 211 bits (536), Expect = 1.490e-60 Identity = 125/298 (41.95%), Postives = 173/298 (58.05%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPL-PCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTL 953
++GKL S+ +R +V R+ + + R PGL +V+ P S +YV +K RA + G ++ D+PT T E+++L + LN+ P+IDGI+VQLPLP G+DS K+ I KD D +P N GR ++ L CTP GI+ LL + ++V G +AVV+G S +VG PM L G T T C H LE +R A++VV A GK + G W++ GAVVVDV +N + K++GDVEYD A+ KASYITPVPGGVGPMTVA L++NTL
Sbjct: 6 IDGKLISQTVRSEVGARVKA-RVEAGLRAPGLAVVLVGQDPASQVYVGSKRRACEEVGFVSKSYDLPT-----TTSESELLNLIDELNQDPEIDGILVQLPLPAGMDSTKILEHIDPEKDVDGFHPYNV--------------GRLSQRIPKLRSCTPKGIITLLDRYNIQVRGMHAVVVGASNIVGRPMTLELLLAGCTTTTC--HRFTKDLESHIRQADLVVVAVGKPNFIPGEWIKEGAVVVDVGINRLD-----SGKLIGDVEYDVAKTKASYITPVPGGVGPMTVATLIENTL 276
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: FOLD_ACTP2 (Bifunctional protein FolD n=22 Tax=Actinobacillus TaxID=713 RepID=FOLD_ACTP2) HSP 1 Score: 210 bits (535), Expect = 2.090e-60 Identity = 123/302 (40.73%), Postives = 179/302 (59.27%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPL-PCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFE 965
++G +K ++ + ++I + +A++K R PGL +++ P S +YV++K ++ G+ + D+P E EA++LA + LN +DGI+VQLPLP +D+ KV +I HKD D +P N GR +K L CTP+G++ LL GV + G +AVV+G S +VG PMA L G TVT H+ L V A+IVV+ GK VKG W++PGA+V+DV +N + G K++GDVEY AA AKAS+ITPVPGGVGPMTVA+L+QNTL ++
Sbjct: 6 ISGTAVAKQVKANIAEQIQAYTAQDK-RKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPAE-----TGEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNV--------------GRLCQKIPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTIT--HSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKPGAIVIDVGINRVEG------KLIGDVEYSAAEAKASFITPVPGGVGPMTVAMLMQNTLQAYQ 279
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: D8MPA2_ERWBE (Bifunctional protein FolD n=8 Tax=Erwiniaceae TaxID=1903409 RepID=D8MPA2_ERWBE) HSP 1 Score: 210 bits (535), Expect = 2.290e-60 Identity = 131/301 (43.52%), Postives = 177/301 (58.80%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFE 965
++GK ++ +RQ+V ++ A K RVPGL +V+ P S IYV +K RA + G ++ D+P +ST+ EA++L + LN +IDGI+VQLPLP G+D+ KV SI+ KD D +P N G QR PCTP GIV LL + + G NAVV+G S +VG PM+ L G T T H L V +A+++V A GK G + G W++PGAVV+DV +N + + GK VVGDV++DAA +ASYITPVPGGVGPMTVA L+QNTL E
Sbjct: 6 IDGKTIAQQVRQEVAVKVQQRLAAGK-RVPGLAVVLVGENPASQIYVGSKRRACEEVGFLSRSYDLP----ASTS-EAELLELIDTLNHDGEIDGILVQLPLPAGIDNVKVLESISPSKDVDGFHPYNV-------------GRLCQRAPKLRPCTPRGIVTLLERYNIDTFGMNAVVVGASNIVGRPMSMELLLAGCTTTVT--HRFTKDLRHHVEHADLLVVAVGKPGFIPGDWIKPGAVVIDVGINRL---ESGK--VVGDVDFDAASERASYITPVPGGVGPMTVATLIQNTLYACE 280
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Match: A0A4P8IL48_9BURK (Bifunctional protein FolD n=1 Tax=Burkholderia sp. DHOD12 TaxID=2571746 RepID=A0A4P8IL48_9BURK) HSP 1 Score: 210 bits (534), Expect = 2.930e-60 Identity = 124/305 (40.66%), Postives = 184/305 (60.33%), Query Frame = 3
Query: 63 LNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGRPDSSIYVDAKIRAAKATGMMATLVDIPTEGVSSTALEAQVLAEVVALNERPDIDGIVVQLPLPTGVDSNKVARSIAVHKDADACNPVNAANVMDEQTWSSVDGGRTQRKFSPLPCTPHGIVMLLAMHGVRVVGQNAVVIGKSRMVGTPMATMLSNGGATVTQCDIHTDRTTLERKVRNANIVVSAAGKAGLVKGHWVRPGAVVVDVAMNTIGGTQGGKRKVVGDVEYDAARAKASYITPVPGGVGPMTVALLLQNTLNLFEASSR 977
++G +K +R++V R ++++A KG PGL +V+ S++YV K++A + G+ +TL +P +T EA++L ++ LN P I GI+VQLPLP +DS+KV +IA KD D + NA +M GR Q + PCTP+G++ +L + + + G++AVVIG+S +VG PMA +L GATVT C H+ L R R+A+IVV+A GK ++ G V+PGA VVDV MN + K+ GDVE+ + A ++TPVPGGVGPMT+ +LL NTL E S+R
Sbjct: 7 IDGVAVAKQLREEVSRRAAALAA--KGTTPGLAVVLVGDDAASAVYVRNKVKACEQHGLFSTLDRMP-----ATVTEAELLERILQLNADPKIHGILVQLPLPAHIDSHKVIEAIAAEKDVDGFHVANAGALMT---------GRPQFR----PCTPYGVLKMLEAYDIPISGKHAVVIGRSNIVGKPMALLLLEAGATVTVC--HSKTADLSRHTRSADIVVAAVGKRNILTGEMVKPGATVVDVGMN-----KNDAGKLCGDVEFASVSEVAGHVTPVPGGVGPMTITMLLVNTLESAERSAR 284 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1252.1904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1252.1904.1 >prot_F-serratus_M_contig1252.1904.1 ID=prot_F-serratus_M_contig1252.1904.1|Name=mRNA_F-serratus_M_contig1252.1904.1|organism=Fucus serratus male|type=polypeptide|length=319bp MVRETAIPALPLNGKLASKVIRQQVKDRISSISAKNKGRVPGLGIVMANGback to top mRNA from alignment at F-serratus_M_contig1252:53761..57326- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1252.1904.1 ID=mRNA_F-serratus_M_contig1252.1904.1|Name=mRNA_F-serratus_M_contig1252.1904.1|organism=Fucus serratus male|type=mRNA|length=3566bp|location=Sequence derived from alignment at F-serratus_M_contig1252:53761..57326- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1252:53761..57326- >mRNA_F-serratus_M_contig1252.1904.1 ID=mRNA_F-serratus_M_contig1252.1904.1|Name=mRNA_F-serratus_M_contig1252.1904.1|organism=Fucus serratus male|type=CDS|length=1914bp|location=Sequence derived from alignment at F-serratus_M_contig1252:53761..57326- (Fucus serratus male)back to top |