mRNA_F-serratus_M_contig125.1890.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig125.1890.1
Unique NamemRNA_F-serratus_M_contig125.1890.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 273 bits (697), Expect = 9.400e-77
Identity = 145/388 (37.37%), Postives = 226/388 (58.25%), Query Frame = 1
Query:    7 PDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            PD+PTT+ E K  S+   W+ A+  E   Q+  G W++VD P GK  L +K +F+ K     ++ K+K R V KG  Q KG+ ++E+ SP    SSIR  LA+ A+ D +  Q+D   AFL+ D+TEE+Y+  P+GY++S  +V RL+K++YGL  A  +W+ K    L   G  +S+ DPC++  K   K +V + V+VDDLL+ S+ K+        L   F + D GE  + LG  I+RDR+ + +  DQ+ Y   V  RFG+   +    P      LS+   P +  E  +M  IPY+EAVG+L++ + + RPD+A+    +++F  NPGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R+SV+G
Sbjct:  837 PDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTG 1221          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 269 bits (687), Expect = 2.200e-75
Identity = 140/393 (35.62%), Postives = 227/393 (57.76%), Query Frame = 1
Query:    7 PDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIA--EMHGIP-YREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSG 1167
            PD P TL +A+ S EW  W+ A++ E    +  G W++ +  + + ++G++ +F +K  +  +V +YK R VA+GF QI G+ Y ++ SP     ++R  +A+ A  DWE RQ+D++ A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KD GE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K + IP+P       R    K D EI   E H +  Y+  +G++M+ +  T P LAY   TL++F  NPG EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG
Sbjct:  852 PDVPKTLKQARESPEWRNWQSAMEEEYGQLMQMGTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLR----KRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISG 1239          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 266 bits (681), Expect = 6.530e-75
Identity = 147/387 (37.98%), Postives = 223/387 (57.62%), Query Frame = 1
Query:   13 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            EP   HEA    +  +W  A++ EM+       +++V+ P+GK  L  K +FK K     +V KYK R V KGF+Q KGI + E  SP    +SIR+ L ++A ++ E  Q+DV+ AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   + ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  ++  ++L  SF +KD G     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  EI EM  +PY  AVG+LM+    TRPD+A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG
Sbjct:  645 EPENFHEAVSHKDKEKWFLAMQDEMESLQKNQTYEIVELPRGKKALKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSG 1029          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK)

HSP 1 Score: 258 bits (659), Expect = 7.300e-75
Identity = 142/391 (36.32%), Postives = 225/391 (57.54%), Query Frame = 1
Query:   10 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--RDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTS--VIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGA 1170
            D+P + ++A +  +  +W  A+  E++   +  VW +VD P+    +G K I+KRK G D +VE +K R VAKGF Q +GI Y E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + EE+Y+  PDG+  +   ++V +L K++YGL  A   W+++F   +   GFE++ ++PCV+  K+  KVVV +V+YVDD+L++    +      E L   F +KD G  ++ LG  I RDRK + +   Q  Y   V  RF ++     ++P+ +GK  LS+   PK   E+ +M  +PY  AVG+LM+    TRPD+ Y    ++++  NPG EHW AV   L+YLKRT  + + Y   + D+ +  + D+D  +  D  +S SG+
Sbjct:  131 DDPVSFNDAMVDLDKEKWLEAMNLEIESMHSNSVWTLVDAPEQIRPIGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY--TSNDLVIQGYTDSDFQADRDMLKSTSGS 516          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A225WDK2_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDK2_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.780e-74
Identity = 147/389 (37.79%), Postives = 221/389 (56.81%), Query Frame = 1
Query:   13 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 1167
            EP +  EA    +   WR A+  E    IA G WK+V  PKGK  L +K IFK K      +E+YK R V +G+ QIK I Y+E  +P     S+R+ LA++A  DWE  Q DV+ AFL  D+ EE+Y+  P+G  ++  +  V +L +A+YGL  A   W KK    L ++GF +  +D C++ R   G  V II +YVDDLL++++T          L + F  KD G + + LG  + R+R  +T++ DQ  YA+ V E+F + + +    P      LS+ + PKN+ E A+M    YR  VG+LM++   +RPD+A+    ++K+ ++PG  HW A  + L+Y+K T   G+   G +   K L+A+VD+D+A   DTRRSVSG
Sbjct:   40 EPKSFKEAMACGDSLHWRKAIDEEGRSLIAHGTWKLVKLPKGKRALTSKWIFKIKYDALGNIERYKARLVIRGYEQIKYIDYEEIFAPVIRLESLRLLLALVAINDWECEQTDVDTAFLNGDLAEEVYMIQPEGLEEAGKEDLVCQLLQALYGLKQAPRAWHKKLTDYLKSKGFVKLDSDSCIYVRTG-GSGVAIIGIYVDDLLLIADTASRIQEMKSMLSAGFKCKDMGAVHHILGLRVKRNRALKTLSIDQTAYAKGVIEKFNLMQLNPCKTPCDPNVILSKENCPKNEDERAQMKNKDYRGLVGSLMYLMTGSRPDIAFGIQCVSKYLNDPGLAHWNAAKRILRYVKGTIGYGLVIDGRSRTGKQLTAFVDSDYAKDIDTRRSVSG 427          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY)

HSP 1 Score: 258 bits (660), Expect = 9.830e-74
Identity = 143/389 (36.76%), Postives = 220/389 (56.56%), Query Frame = 1
Query:   10 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            D+P++  +A  SS+  +W  A+  E+       VW +VD P G   +G K +FK K     ++E+YK R VAKGF Q +G+ Y+E+ SP  ++ S R+ +A++A  D E  Q+DV+ AFL  D+TE++Y+  PDG++ S  +  V +L+K++YGL  A   W  KF   + + GF+ +  D C++  K  G  ++ +V+YVDD+L+ S            L  +F +KD GE S+ LG  I RDR    +   Q+ Y   V ERF +   +    P  K   LS+   P+ND E  EM  IPY  AVG+LM+    TRPD+A+    L +F  +PG +HW+A  K L+YL+RT    +TY   ++ +++  + DAD+A C D  +S SG
Sbjct:  276 DDPSSYSQAIQSSQSTKWIDAMVDELKSMDNNNVWDLVDLPNGCRPIGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVVGYADADYAGCADDLKSTSG 662          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A151RYL1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RYL1_CAJCA)

HSP 1 Score: 261 bits (668), Expect = 1.210e-73
Identity = 148/392 (37.76%), Postives = 224/392 (57.14%), Query Frame = 1
Query:   10 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVE-KYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS---LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            D PTT  EA   SE  +WR A+  EM+       WK+ + PKGK  +G K ++ +K G   + E +YK R VAKG+ Q +GI Y E  SP    SSIR+ LA++AQLD E  Q+DV+ AFL  D+ EE+Y+  P+G++     N   +L+K++YGL  +   W K+F   ++ + + RS+ D CV+ RK      + +++YVDD+L+ S+ K++  +    L   F +KD GE    LG  I+RDRK   +   Q+ Y + V +RFGI   S  PV T  AS   LS    P++ AE A M  +PY  AVG+LM+    TRPD++Y    ++++  NPG EHW+AV   L+Y+  T  +G+ +    +   +  + D+++A   D RRS +G
Sbjct:  577 DIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESK-PVSTPLASHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVCTRPDISYAVGVVSRYMHNPGKEHWQAVKWILRYILNTVDVGLVFQQEQDGQNVVGYCDSNYAGDLDNRRSTTG 967          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 249 bits (637), Expect = 4.050e-73
Identity = 138/374 (36.90%), Postives = 209/374 (55.88%), Query Frame = 1
Query:   49 EWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            E  QW  A+K E D     G W  V R     V+ TK +F +K  +   + ++K R VA GF Q+ G+ + E+ +   +  SIR+ L+V     +   QLDV+ AFL AD+ E++Y+E P+G +   ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G     I +YVDD++V   T+       + + + F IK+ G + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADGP++D + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG
Sbjct:    5 EKEQWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSG 377          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A4Y9ZBF0_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9ZBF0_9AGAM)

HSP 1 Score: 261 bits (666), Expect = 1.940e-72
Identity = 150/390 (38.46%), Postives = 218/390 (55.90%), Query Frame = 1
Query:   13 EPTTLHEAKM--SSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSG 1167
            EP TL EA      +  +W  A   E+   +  G +++V  P  +T LG++ +FK K   D  +E++K R V +GF Q  G  Y E+ +PTP  S++R  LA+ A  D E   +D+  AFL  D+ EE+YV  P+G+ +  P  V RL K++YGL  AG  W KK    L A GF R + +  ++  +    V +II V++DD+ + S+++    +  +DLR+ F  +D G  S+ LG  ITRDR  RT++  Q++Y   + ERFG+ +   +  P    + L+ A  PK   E AEMH  PYR AVGAL ++A  TR D+A++   LA+FG NPG EHWKA+   L+YLK T    +TY        L +A+ DADH    D  RS SG
Sbjct:  666 EPRTLREALALGGEQAKKWYSAAVEEVQALVENGTFQLVRLPPDRTALGSRWVFKVKHKSDGSIERHKARLVVQGFSQRPGFDYTETFAPTPRWSALRAVLALAAIEDLELESIDISSAFLNGDLEEEIYVRQPEGFTEKGPEWVWRLLKSLYGLKQAGRCWHKKLNEVLEALGFHRIKCEHSIWVYQR-DDVRIIIPVFIDDMTIASKSQAAIQKVKDDLRAHFKFRDLGPTSWLLGVEITRDRSTRTLSLSQRQYTLDLLERFGMSQCDTVATPLNPGTRLTSAMSPKTQEESAEMHDKPYRAAVGALQYLATATRCDIAHSVGVLARFGHNPGIEHWKALKHLLRYLKGTLDYKLTYHPDPSGSHLFTAFCDADHGGDLDNGRSTSG 1054          
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Match: A0A5N6QA02_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6QA02_9ASTR)

HSP 1 Score: 257 bits (656), Expect = 2.000e-72
Identity = 141/388 (36.34%), Postives = 221/388 (56.96%), Query Frame = 1
Query:   13 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRA-DGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 1167
            +PT+ HEA  S +  +W+ A+  E+D      VW +V+ P G   +G K +FK K+  +  +E++K R VAKGF Q +GI YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL  D+ E+++++ P+G+     +  V +L+K++YGL  A   W  KF   +   GF ++Q D C +  K  G    I+V+YVDD+L+ S +    H +   L  +F +KD GE SY +G  I RDR    +   Q+ Y   V  R+ ++  S    P  K  +  +   PK +AE A+M  IPY   VG+LM+    TRPD+AY A  L ++  NPG +HWKA  K L+YL+ T    +TY   ++++++  + D+D A C D ++S SG
Sbjct:  410 DPTSYHEAITSDQSSEWKIAMTDELDSMKKNDVWDLVELPNGVKPVGCKWVFKTKLDPNGNIERFKARLVAKGFTQKEGIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLYEDVFMKQPEGFMPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKKHGFLKNQVDQCTYL-KMSGSNFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVNGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDVFGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTYR-RSDNLEVVGYSDSDFAKCKDDKKSTSG 795          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig125.1890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A9Z683_LYGHE9.400e-7737.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C3AKI0_9AGAM2.200e-7535.62Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
UPI001F00A0486.530e-7537.98DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A4Q3DG62_9RICK7.300e-7536.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A225WDK2_9STRA3.780e-7437.79Integrase, catalytic core protein n=1 Tax=Phytopht... [more]
A0A2N9GV19_FAGSY9.830e-7436.76Integrase catalytic domain-containing protein n=6 ... [more]
A0A151RYL1_CAJCA1.210e-7337.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A8K1CTN1_PYTOL4.050e-7336.90Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A4Y9ZBF0_9AGAM1.940e-7238.46Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
A0A5N6QA02_9ASTR2.000e-7236.34Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig125contigF-serratus_M_contig125:176559..178096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue4e-63
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1538
Cds size1137
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig125.1890.1prot_F-serratus_M_contig125.1890.1Fucus serratus malepolypeptideF-serratus_M_contig125 176921..178057 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929177.1941195-UTR-F-serratus_M_contig125:176558..1769201622929177.1941195-UTR-F-serratus_M_contig125:176558..176920Fucus serratus maleUTRF-serratus_M_contig125 176559..176920 -
1690962738.0703058-UTR-F-serratus_M_contig125:176558..1769201690962738.0703058-UTR-F-serratus_M_contig125:176558..176920Fucus serratus maleUTRF-serratus_M_contig125 176559..176920 -
1622929177.2227385-UTR-F-serratus_M_contig125:178057..1780961622929177.2227385-UTR-F-serratus_M_contig125:178057..178096Fucus serratus maleUTRF-serratus_M_contig125 178058..178096 -
1690962738.0982597-UTR-F-serratus_M_contig125:178057..1780961690962738.0982597-UTR-F-serratus_M_contig125:178057..178096Fucus serratus maleUTRF-serratus_M_contig125 178058..178096 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929177.2059925-CDS-F-serratus_M_contig125:176920..1780571622929177.2059925-CDS-F-serratus_M_contig125:176920..178057Fucus serratus maleCDSF-serratus_M_contig125 176921..178057 -
1690962738.0880892-CDS-F-serratus_M_contig125:176920..1780571690962738.0880892-CDS-F-serratus_M_contig125:176920..178057Fucus serratus maleCDSF-serratus_M_contig125 176921..178057 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig125.1890.1

>prot_F-serratus_M_contig125.1890.1 ID=prot_F-serratus_M_contig125.1890.1|Name=mRNA_F-serratus_M_contig125.1890.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQD
ARVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEG
RQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW
SKKFGGELIAEGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQ
DEHRAMEDLRSSFPIKDPGEISYYLGCHITRDRKARTVTFDQQRYAQTVT
ERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWV
ANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGA
TEDMKLSAWVDADHASCPDTRRSVSGAR*
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mRNA from alignment at F-serratus_M_contig125:176559..178096-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig125.1890.1 ID=mRNA_F-serratus_M_contig125.1890.1|Name=mRNA_F-serratus_M_contig125.1890.1|organism=Fucus serratus male|type=mRNA|length=1538bp|location=Sequence derived from alignment at F-serratus_M_contig125:176559..178096- (Fucus serratus male)
TACCTACCAGACGAGCCCACCACCCTGCACGAAGCGAAGATGTCCTCCGA GTGGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGATTG CGCGTGGTGTGTGGAAGGTCGTCGATCGACCCAAAGGAAAAACCGTACTC GGCACCAAGACCATTTTTAAACGGAAAGTCGGCCAGGATGCCCGTGTAGA AAAATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAAGGGGA TTCATTACCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGG ATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGA CGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACGTTG AGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAG AAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGTT CGGCGGAGAGTTGATAGCGGAGGGGTTCGAGAGGTCCCAAGCCGATCCCT GTGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGTC TACGTTGACGATCTACTGGTGCTGAGCGAAACGAAGCAGGACGAGCATCG GGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCCAGGGGAGA TCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGACG GTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATTCGG AATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCGTCACTTT CGAGGGCAGACGGGCCGAAAAACGACGCTGAGATCGCAGAGATGCATGGC ATCCCGTATCGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGAC TCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACA ACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTG AAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACAT GAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATGCCCTGATACGC GTCGTTCGGTATCGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATCAGTT GGTTTTCGCGGGCGCAGAGAATAACCGCGACAGCAACGTCCGAATCGGAG TACGTAGCACTGGCGGAGATTGTGAATGAGCTACGTTTCCTTCGGCAGGT GAAAGCGTTCATGGTACCTCCAATCGACACCAACATCCGTGTTCACGAGG AGAACGAAGGCGCTATCAAGATGGCAGAGAACAGGTTTAGTAGTCGACGA ACAAGACACATCGACGTGAAGCATCATATGGTTCGGGATGCCGTCGATGG GGGAATAGTCCGTGTAGAGTATGTCAAGTCGAGAGATCAGCATGCGGACG TACTAACTAAGGCGATAGATGCTAAGTCGTTTGAAAAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig125:176559..178096-

>mRNA_F-serratus_M_contig125.1890.1 ID=mRNA_F-serratus_M_contig125.1890.1|Name=mRNA_F-serratus_M_contig125.1890.1|organism=Fucus serratus male|type=CDS|length=2274bp|location=Sequence derived from alignment at F-serratus_M_contig125:176559..178096- (Fucus serratus male)
ATGTCCTCCGAGTGGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGA
CGGCCAGATTGCGCGTGGTGTGTGGAAGGTCGTCGATCGACCCAAAGGAA
AAACCGTACTCGGCACCAAGACCATTTTTAAACGGAAAGTCGGCCAGGAT
GCCCGTGTAGAAAAATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCA
GATCAAGGGGATTCATTACCAAGAGTCATCGTCGCCGACACCTACACAGT
CGAGCATCCGGATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGG
CGGCAGCTTGACGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGA
GCTATACGTTGAGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTG
GACGACTGCAGAAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGG
TCGAAGAAGTTCGGCGGAGAGTTGATAGCGGAGGGGTTCGAGAGGTCCCA
AGCCGATCCCTGTGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCA
TCATTGTGGTCTACGTTGACGATCTACTGGTGCTGAGCGAAACGAAGCAG
GACGAGCATCGGGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGA
TCCAGGGGAGATCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCA
AGGCCAGGACGGTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACC
GAGCGATTCGGAATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAA
AGCGTCACTTTCGAGGGCAGACGGGCCGAAAAACGACGCTGAGATCGCAG
AGATGCATGGCATCCCGTATCGCGAGGCAGTGGGGGCACTAATGTGGGTA
GCCAACATGACTCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAA
GTTCGGTGACAACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGC
TACAGTACCTGAAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCG
ACGGAGGACATGAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATG
CCCTGATACGCGTCGTTCGGTATCGGGGGCGCGGTGAATGTCCTCCGAGT
GGCCGCAATGGCGCGGCGCGCTCAAGCGCGAGATGGACGGCCAGATTGCG
CGTGGTGTGTGGAAGGTCGTCGATCGACCCAAAGGAAAAACCGTACTCGG
CACCAAGACCATTTTTAAACGGAAAGTCGGCCAGGATGCCCGTGTAGAAA
AATACAAGTGCCGCTTCGTGGCCAAGGGTTTCCGCCAGATCAAGGGGATT
CATTACCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGAT
GGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGACG
TAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACGTTGAG
CTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAGAA
GGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGTTCG
GCGGAGAGTTGATAGCGGAGGGGTTCGAGAGGTCCCAAGCCGATCCCTGT
GTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGTCTA
CGTTGACGATCTACTGGTGCTGAGCGAAACGAAGCAGGACGAGCATCGGG
CGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCCAGGGGAGATC
TCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGACGGT
GACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATTCGGAA
TTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCGTCACTTTCG
AGGGCAGACGGGCCGAAAAACGACGCTGAGATCGCAGAGATGCATGGCAT
CCCGTATCGCGAGGCAGTGGGGGCACTAATGTGGGTAGCCAACATGACTC
GGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACAAC
CCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAA
ACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGA
AGCTATCGGCATGGGTGGACGCCGATCACGCATCATGCCCTGATACGCGT
CGTTCGGTATCGGGGGCGCGGTGA
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