mRNA_F-serratus_M_contig1248.1879.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: D7FI71_ECTSI (Ribosomal_L14e domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI71_ECTSI) HSP 1 Score: 206 bits (523), Expect = 3.180e-66 Identity = 105/133 (78.95%), Postives = 119/133 (89.47%), Query Frame = 1
Query: 7 GFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPDTGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKASA 405
GF RFVEIGRV +++YGP EGKLAVI+DV DNNKAL++GPDTGVPRQ+IPFKRLALTD+ LPIQRNAR GTI AAK DL AKWEASSWAKKKA+K KRA+MTDFDRFKVMVARK+KS IIA+KV EL+A+A
Sbjct: 2 GFTRFVEIGRVVLVNYGPDEGKLAVILDVADNNKALIEGPDTGVPRQLIPFKRLALTDFKLPIQRNARIGTIKAAAKEADLYAKWEASSWAKKKAKKVKRAQMTDFDRFKVMVARKQKSAIIAKKVAELQAAA 134
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.710e-49 Identity = 85/135 (62.96%), Postives = 108/135 (80.00%), Query Frame = 1
Query: 7 GFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKASA 405
GF RFVEIGRVA+I+YGP EGKL IIDVVD+NKAL+DGP+ TGV RQMIPFKRLALTD+ + I RNAR GT+ KA D++AKW A++WA+K+A KAKRA + D DRFK+M+ARK+K++ + + +LK SA
Sbjct: 2 GFTRFVEIGRVALINYGPDEGKLCTIIDVVDHNKALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKWGATAWARKRAAKAKRASLGDLDRFKLMIARKQKARAVNTALAKLKKSA 136
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: B8BUA7_THAPS (RL14, ribosomal protein 14 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUA7_THAPS) HSP 1 Score: 160 bits (406), Expect = 2.080e-48 Identity = 84/133 (63.16%), Postives = 106/133 (79.70%), Query Frame = 1
Query: 7 GFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKA 399
GF R+VE+GRV +I+YGP GKLA +IDVVD NK LV GP+ TGV RQ+IP++R+ALTD T+ IQR+ARA + A D +AKWE SSWAKK K+KRA ++DFDRFKVMVA+K+KS+IIA+K+KELKA
Sbjct: 2 GFSRYVEVGRVVLITYGPDAGKLATVIDVVDQNKCLVQGPEEITGVKRQVIPYRRIALTDLTVKIQRSARAKQLKAAWAEGDTLAKWEGSSWAKKLDGKSKRAALSDFDRFKVMVAKKQKSRIIAQKIKELKA 134
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A7S0F6W3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6W3_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.960e-48 Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 1
Query: 10 FKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKA 399
FKR+VE+GRV +I+YGP EGKLA IID+VD NK L+DGP TG PRQ+I F R+ALTD T+ IQRNAR ++ KA + + M+KW+ASSWAKK A + KRA ++DFDRFKVMVARK+K++IIA+KV EL+A
Sbjct: 3 FKRYVEVGRVVLINYGPDEGKLATIIDIVDQNKCLIDGPMEITGAPRQVISFTRIALTDLTVKIQRNARQKSLKKAWEEGETMSKWDASSWAKKLAARKKRASLSDFDRFKVMVARKQKNEIIAKKVAELEA 134
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A7S2SNQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNQ8_9STRA) HSP 1 Score: 160 bits (406), Expect = 3.660e-48 Identity = 83/130 (63.85%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 7 GFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKE 390
GF RFVE+GRV +I+YGP GKLA +ID+VD NK LVDGP+ TGV RQ+I + R+ LTD + IQRNARA T+ A K D MAKWE S WAKK A K+KRA ++DFDRFKVM+A+K+KSKIIA+K+KE
Sbjct: 23 GFSRFVEVGRVVLITYGPSAGKLATVIDIVDQNKCLVDGPEEITGVSRQVISYSRIQLTDLKVNIQRNARAKTLKAALKEADTMAKWEGSEWAKKLAAKSKRASLSDFDRFKVMLAKKQKSKIIAQKIKE 152
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A7S2EK65_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EK65_TRICV) HSP 1 Score: 161 bits (408), Expect = 6.230e-48 Identity = 84/132 (63.64%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 10 FKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKA 399
F R+VE+GRV +I+YGP EGKLA IID+VD NK L+DGP TGV RQ+IP+KR+ALTD T+ I RNARA T+ KA D+ AKW+ SSWAKK + K KRA ++DF RFKVMVA+KK+S I+A+K+KELKA
Sbjct: 61 FTRYVEVGRVVLINYGPEEGKLATIIDIVDQNKCLIDGPADLTGVVRQVIPYKRIALTDITVKIARNARAKTLKKAWTEGDVQAKWDGSSWAKKLSSKKKRASLSDFGRFKVMVAKKKRSAIVAKKIKELKA 192
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A6U6K629_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6K629_9STRA) HSP 1 Score: 159 bits (402), Expect = 8.450e-48 Identity = 81/132 (61.36%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 10 FKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKA 399
F R+VE+GRV +I+YGP GKLA +ID+VD NK L+DGP+ TGV RQ+IP+KR+ALTD + +QR+ARA T+ A K D + KWE+SSWAKK A K KRA ++DFDRFKVMVA+K+K I+A+KVKE+KA
Sbjct: 3 FSRYVEVGRVVLINYGPESGKLATVIDIVDQNKCLIDGPEEITGVSRQVIPYKRIALTDLKVNVQRSARAKTLKAAWKEGDTLNKWESSSWAKKLASKKKRANLSDFDRFKVMVAKKQKRYIVAKKVKEMKA 134
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN) HSP 1 Score: 158 bits (400), Expect = 1.550e-47 Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = 1
Query: 10 FKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGP--DTGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKEL 393
F RFVE+GRV +I+YGP EGKLA IID+VD NK LVDGP TGV RQ+IPFKR+ALTD + I +NAR T++KA D++AKW+ASSWAKK A K KRA +TDF RF++MVARK++S I+A KVKE+
Sbjct: 1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNKCLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKWDASSWAKKLAAKKKRASLTDFQRFQLMVARKQRSAIVAAKVKEM 130
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: K0T455_THAOC (Ribosomal_L14e domain-containing protein n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T455_THAOC) HSP 1 Score: 157 bits (398), Expect = 3.430e-47 Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 7 GFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELK 396
GF R+VE+GRV I+YG GK+A +ID+VD NK LVDGP+ TGV RQMI +KR++LTD T+ IQR+ARA + A K D +AKWE SSWAKK A K+KRA ++DFDRFKVMVA+K+KS+IIA K+KELK
Sbjct: 2 GFSRYVEVGRVVYINYGADAGKIATVIDIVDQNKCLVDGPEEITGVKRQMISYKRISLTDMTVKIQRSARAKQLKAAWKEGDTLAKWEGSSWAKKLAAKSKRASLSDFDRFKVMVAKKQKSRIIAAKMKELK 133
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Match: A0A7S2S552_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S552_9STRA) HSP 1 Score: 157 bits (397), Expect = 4.870e-47 Identity = 82/132 (62.12%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 10 FKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPD--TGVPRQMIPFKRLALTDYTLPIQRNARAGTISKAAKAEDLMAKWEASSWAKKKARKAKRARMTDFDRFKVMVARKKKSKIIAEKVKELKA 399
F R+ E+GRV +I++GP GKLA IID+VD NK LV+GP+ TGV R++IPF+RL LTD+T+ I RNAR+ T+ A K D+ AKWEA+SWAKK KAKRA ++DF RFKVMVARK+KS II++K+KELKA
Sbjct: 3 FTRYAEVGRVVLINFGPDAGKLATIIDIVDQNKCLVEGPEDITGVSRKVIPFRRLQLTDFTVKISRNARSKTLKAAWKEADISAKWEATSWAKKLDNKAKRADLSDFGRFKVMVARKQKSAIISKKIKELKA 134 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1248.1879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1248.1879.1 >prot_F-serratus_M_contig1248.1879.1 ID=prot_F-serratus_M_contig1248.1879.1|Name=mRNA_F-serratus_M_contig1248.1879.1|organism=Fucus serratus male|type=polypeptide|length=136bp MQGFKRFVEIGRVAMISYGPHEGKLAVIIDVVDNNKALVDGPDTGVPRQMback to top mRNA from alignment at F-serratus_M_contig1248:160417..164334+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1248.1879.1 ID=mRNA_F-serratus_M_contig1248.1879.1|Name=mRNA_F-serratus_M_contig1248.1879.1|organism=Fucus serratus male|type=mRNA|length=3918bp|location=Sequence derived from alignment at F-serratus_M_contig1248:160417..164334+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1248:160417..164334+ >mRNA_F-serratus_M_contig1248.1879.1 ID=mRNA_F-serratus_M_contig1248.1879.1|Name=mRNA_F-serratus_M_contig1248.1879.1|organism=Fucus serratus male|type=CDS|length=816bp|location=Sequence derived from alignment at F-serratus_M_contig1248:160417..164334+ (Fucus serratus male)back to top |