mRNA_F-serratus_M_contig1247.1871.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: D7FHF9_ECTSI (U2 small nuclear ribonucleoprotein auxiliary factor large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF9_ECTSI) HSP 1 Score: 490 bits (1262), Expect = 1.310e-163 Identity = 249/294 (84.69%), Postives = 271/294 (92.18%), Query Frame = 1
Query: 895 MLKIGRPSKYQGPMTPASTWQRLTGQEAADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKFNQRIFTAEGNSEMSEA 1776
MLKIGRPSKYQGP TP+STWQRLTGQE+ADNVVDP+TKVYRELYIGNTSPDMTDMVLKDFLS+TM KVG S KEGSPIIHARVSGNFAFVECR+VEETT+LLNLNNIPFLG+ELKINRPSKYPGP+TPH+NWPD+LA RFTSGNPNA+LPAPAT +GG+ESAQAAA AAVAAL VV++ RPTTTLRLNNMLT DL DE+ GDIEEETKEECEKFGSVKSVHIPR STT+E EKPGVGYVFVAFDAV+SA+KAAASLRARTFDGRKVEVTYWDE+KFN R+F GN E +A
Sbjct: 1 MLKIGRPSKYQGPATPSSTWQRLTGQESADNVVDPSTKVYRELYIGNTSPDMTDMVLKDFLSSTMQKVGFSQKEGSPIIHARVSGNFAFVECRTVEETTALLNLNNIPFLGQELKINRPSKYPGPDTPHLNWPDVLA-RFTSGNPNAALPAPATTFGGIESAQAAAQAAVAAL-VVNMPRPTTTLRLNNMLTAGDLADESSFGDIEEETKEECEKFGSVKSVHIPRPSTTSEAEKPGVGYVFVAFDAVDSASKAAASLRARTFDGRKVEVTYWDEDKFNDRVFNETGNDEAVQA 292
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S2V6E6_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E6_9STRA) HSP 1 Score: 351 bits (900), Expect = 1.380e-106 Identity = 179/356 (50.28%), Postives = 243/356 (68.26%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEAAD--NVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKF 1728
DK RELFVGNTP GTS+ VL+EFLNAA+ QV L T+ GNP++ CRV+NK+AF+ELRS EE +N L+LNGIPFMGQ+LKIGRP+KY GP+ ASTWQ LTGQ+A + +VVDP+TK+YRELYIG+T+ +MT++ L++FL M +VGL+ +EG+PI+ R SG FAFVE RS+EE + LNLN+IPF+G+ LKI RPSKYPGP+ PH+NW D+LA P G + +P+ + L+NM+T ++L D+ +I E+T++EC K+G+V+S+ IPR + GVG VF+ F + AAKA +L+ RTF G KV+ Y+ E K+
Sbjct: 203 DKAFRELFVGNTPPGTSELVLMEFLNAALNQVKLTTAPGNPIIGCRVSNKFAFIELRSAEETNNCLSLNGIPFMGQLLKIGRPTKYCGPVIQASTWQALTGQQAPEGASVVDPSTKLYRELYIGSTTAEMTELGLQEFLGTAMQQVGLTLQEGNPIVQVRHSGTFAFVELRSIEEANNCLNLNSIPFMGQFLKIGRPSKYPGPQVPHLNWEDVLAKYMAGEMPTG--------------------------GGAAQQQPSRVIALSNMVTTDELMDDTTYQEIVEDTRDECGKYGAVQSMEIPRPGAPH-----GVGKVFIEFTSTADAAKAIGALKGRTFAGNKVDARYFPESKY 527
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A835ZHK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK3_9STRA) HSP 1 Score: 348 bits (893), Expect = 7.920e-106 Identity = 196/366 (53.55%), Postives = 240/366 (65.57%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQ-EAADNVV-----------DPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKE-GSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSV-ARPTT-TLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTN---EQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTY 1710
DKT ELFVGNTP TS+FVLL FLNAAM QVNLNT+ GNP+V CRV+NK+AF+ELRS +E +N L+LN IPFMG LKIGRPSKY+GP +TWQ LTGQ E A + DPATKVYRELY+GN P MT+ + +FL T+ KVGL+T G+P++ AR SGNF+F+E RS+E+ ++LNLN IPF+G L+I+RP+KY GP TP M WPD+LA G GG + A LG + +P T LRLNNML+ +DL DE GL DIEEETK EC FG VK VHI R STT+ E+ GVGYVFV F+ ++A KA SL RTFD +K+ Y
Sbjct: 44 DKTQLELFVGNTPPNTSEFVLLNFLNAAMAQVNLNTAPGNPIVQCRVSNKFAFIELRSVDETNNCLSLNQIPFMGTPLKIGRPSKYRGPPVNCTTWQALTGQPELAGGTMMPGAGGSMSGLDPATKVYRELYVGNVQPTMTEASIAEFLGTTLQKVGLATSAPGNPVVIARSSGNFSFIEMRSIEDANAMLNLNGIPFMGSTLRISRPAKYAGPMTPAMTWPDVLARLVAQG-------------GGADKA----------LGTPAAPTQPATRVLRLNNMLSADDLADEEGLADIEEETKGECATFGPVKKVHIVRPSTTDAAAEKTATGVGYVFVEFEEADAARKAMLSLSTRTFDNKKLSSVY 386
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S4D6W7_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6W7_HETAK) HSP 1 Score: 347 bits (890), Expect = 7.260e-105 Identity = 191/392 (48.72%), Postives = 258/392 (65.82%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEAADN----VVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGV------------VSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKP-GVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKFNQRIFTAEGNSEMSEAPHHGS 1791
DKT RELFVGNTP GTS+ VL+EFLNAAM QV N GNP+++CR++ K+AF+ELR+ EE +N LNLNGIPFMG LK+GRP+KY GP+TPA TWQ+LTGQ + VDP TK+YR+LY+GN SP+MT+ LK+FL + M +VGL+ +EG+ I+ R+SG FAF+E RSVEE + ++NLN IPF+G+ LKI RP+KYPGPE PH+NW DILA ++ +G A PA A AA AAV + P+ + L+NM+T++DL D+ +I E+T++EC KFG+V+++ IPR ++ P GVG VFV + + E A KA +L RTF G VE Y+ E K+ + F+ E + + AP GS
Sbjct: 53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGLNQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILA-KYMAGELKAKPKMPAVA---------AAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPR-----PKDGPHGVGLVFVHYSSEEEAKKAIDALSGRTFAGNTVEAKYFPEAKYLAKDFSPEPAAGAAAAPPGGS 429
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S3XTW3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW3_HETAK) HSP 1 Score: 322 bits (826), Expect = 2.170e-97 Identity = 174/346 (50.29%), Postives = 234/346 (67.63%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEAADN----VVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGV------------VSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKP-GVGYVFVAFDAVESAAK 1653
DKT RELFVGNTP GTS+ VL+EFLNAAM QV N GNP+++CR++ K+AF+ELR+ EE +N LNLNGIPFMG LK+GRP+KY GP+TPA TWQ+LTGQ + VDP TK+YR+LY+GN SP+MT+ LK+FL + M +VGL+ +EG+ I+ R+SG FAF+E RSVEE + ++NLN IPF+G+ LKI RP+KYPGPE PH+NW DILA ++ +G A PA A AA AAV + P+ + L+NM+T++DL D+ +I E+T++EC KFG+V+++ IPR ++ P GVG VFV + + E A K
Sbjct: 53 DKTKRELFVGNTPPGTSEVVLMEFLNAAMIQVKQNIEEGNPIMSCRMSAKFAFIELRTAEEANNCLNLNGIPFMGYYLKVGRPTKYAGPITPAKTWQQLTGQAPPADPTAVAVDPQTKIYRDLYVGNCSPEMTEPALKEFLGSAMEQVGLNQQEGNCILQVRLSGTFAFIEVRSVEEASHMMNLNGIPFMGQFLKIKRPTKYPGPEVPHLNWDDILA-KYMAGELKAKPKMPAVA---------AAPAAVPSXXXXXXXXXXXXXXXAGPGTPSKVMTLSNMVTHDDLADDETYDEILEDTQDECSKFGAVQTIAIPR-----PKDGPHGVGLVFVHYSSEEEAKK 383
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S4RDP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDP7_9STRA) HSP 1 Score: 313 bits (801), Expect = 1.540e-93 Identity = 187/405 (46.17%), Postives = 243/405 (60.00%), Query Frame = 1
Query: 586 PSASQFSLPMGPGAVPGMMGGM------------GMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQE-------AADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKFNQRIF 1743
P+A+ + M PGA G M GM DK RELFVGNTP GTS+ +L +FLN AM++ L + P++ CR N K+AFVE S + + ALNLNGIPFMG L++ RPSKY GP P+ TWQ LTGQ +N KV REL+IGNT+P+MT+ +L DFL M +VGL+T G+PI RVSG FAF+E RS EET + LNLNNIP+LG +L++ RPSKY G +TPH NW DILA ++ SG LP+ GG A AAA A A GV PT + L NMLT ++L + +I E+TKEEC +FGS+K++ IPR + PG +F+ + + + AA A L RTFDGRKVE ++DE KF + +
Sbjct: 53 PTAAAYGGMMMPGAQAGAMPGMVPVMMMPNPLMVATAAQDKVNRELFVGNTPPGTSEALLTQFLNGAMRRTKLCAADAMPIIQCRTNQKFAFVECASIADANLALNLNGIPFMGSSLRVSRPSKYAGPHVPSKTWQELTGQTLPVGLTPVPENTSPAEDKVNRELFIGNTTPEMTESMLTDFLGKAMEQVGLATHPGNPITACRVSGKFAFIELRSKEETANALNLNNIPYLGAQLRVGRPSKYVGAQTPHGNWEDILA-KYMSGE--LKLPS----QGG---APAAAPAPAANTGV-----PTRVVELKNMLTMDELTSDQDYEEIMEDTKEECSQFGSLKNLVIPR-------DGPGATKIFLEYMSTDDAAAAIKGLAGRTFDGRKVEAIFYDETKFANKEY 435
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A448YVH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVH2_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.810e-93 Identity = 169/361 (46.81%), Postives = 232/361 (64.27%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEA-ADNVVDPAT-KVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKFNQRIF 1743
+K RELFVGNTP GTS+ +LL+FLN AM++V L P++ CRVN+K+AFVEL S E + ALN+NGIPF+G +LK+ RPSKY GP PA TWQ+LTGQ A V+D K+ REL++GNT+P+MT+ +L++FL N M +VGL+ G+PI RVSG FAFVE RS EE + LNLNNIPF+G +L++ RPSK+ GP H NW D+LA ++ SG A AP M S + T + L NMLT EDL E ++ E+T++EC+++G + +V+IP+ + +PG VF+ + + E A+KA SL RTFDG++VE T++DE KF + F
Sbjct: 70 EKINRELFVGNTPPGTSEMLLLQFLNGAMRRVKLCGEQETPILNCRVNSKFAFVELVSAEMANKALNMNGIPFLGAVLKVSRPSKYAGPHVPARTWQQLTGQALPAGTVLDAEQEKINRELFVGNTTPEMTERMLREFLGNAMEQVGLNVMPGNPITSCRVSGKFAFVELRSPEEAANALNLNNIPFMGAQLRVGRPSKWSGPPDSHGNWEDVLA-KYMSGELQAGNTAPGQGAAAMN----------------SNVKATRVVELKNMLTXEDLSVEEEYNELVEDTEQECKQYGQLLNVYIPK------KGEPGATKVFLEYASTEDASKAIKSLEGRTFDGQRVEATFFDETKFMNKTF 407
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S4I336_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I336_9STRA) HSP 1 Score: 309 bits (792), Expect = 2.720e-92 Identity = 173/362 (47.79%), Postives = 226/362 (62.43%), Query Frame = 1
Query: 667 DKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEAADNVVDPA--------TKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKF 1728
DK RELFVGNTP GTS+ +L++FL+ AM++ L +G+P+VTCRVN K+AFVE + + + ALNLNGIPF+G LK+ RPSKY GP P+ +WQ LTG + + K+ REL+IGNT+P+MT+ +L DFL M +VGLS G+PI+ R SG FAF+E R+ +E S LNLNNIP+LG +L++ RPSKY GPETPH NW DILA ++ SG LP+ GG A AA HA A T + L MLT +DL ++ +I E+T EEC +FGS+K V IPR PG +F+ + E AA+A ASL RTFDGRKV Y+DE +F
Sbjct: 84 DKVNRELFVGNTPPGTSEMLLIQFLSGAMRRTGLCKPSGSPIVTCRVNQKFAFVECATVDCANRALNLNGIPFLGSCLKVSRPSKYAGPFVPSKSWQELTGTALPNGLAGAGGALAGSAEDKINRELFIGNTTPEMTEQMLSDFLGKAMEQVGLSKAPGNPIVTCRTSGKFAFIELRTTDEAASALNLNNIPYLGAQLRVGRPSKYTGPETPHGNWEDILA-KYMSGE--LQLPSK-DGGGGAAPAPAAPHAIDA----------TCVVELCQMLTQQDLENDDEYKEILEDTTEECGQFGSLKRVVIPRSG-------PGATKIFLEYATKEDAARAIASLAGRTFDGRKVTAVYYDEARF 424
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: A0A7S2HGX3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HGX3_9STRA) HSP 1 Score: 306 bits (785), Expect = 4.580e-92 Identity = 179/387 (46.25%), Postives = 233/387 (60.21%), Query Frame = 1
Query: 619 PGAVPG-----MMGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQE-------AADNVVDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSGNPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKFNQRIF 1743
PG VPG M+ DK RELFVGNTP GTS+ +L+ FLN AM++ + + P++ CR N K+AFVE S +E + ALNLNGIPFMG L++ RPSKY GP + TWQ LTGQ +N KV REL+IGNT+P+MT+ +L DFL M +VGLS + G+PI RVSG FAF+E RS EE + LNLNNIP+LG +L++ RPSKY G +T H NW DILA ++ SG LP+ Q A AA AA V PT + L NMLT E+L + +I E+TKEEC +FGS+K++ IPR + PG +F+ + + + AAKA L RTFDGRKVE ++DE KF + +
Sbjct: 9 PGVVPGAAAPLMVSPAVAAAQDKVNRELFVGNTPPGTSETLLMAFLNGAMRRTKICAADATPIIQCRTNQKFAFVECASIQEANLALNLNGIPFMGSSLRVSRPSKYAGPHVASKTWQELTGQALPAGLTPVPENTSPAEDKVNRELFIGNTTPEMTEGMLTDFLGKAMEQVGLSNQPGNPITACRVSGKFAFIELRSKEEAANALNLNNIPYLGAQLRVGRPSKYTGVQTSHGNWEDILA-KYMSGE--LKLPS-----------QGGAPAA-AATPAEDVGSPTRVVELKNMLTKEELTSDQDYEEIMEDTKEECSQFGSLKNLVIPR-------DGPGATKIFLEYLSTDDAAKAIQGLAGRTFDGRKVEAVFYDETKFANKEY 373
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Match: K0SQC2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQC2_THAOC) HSP 1 Score: 308 bits (790), Expect = 6.150e-92 Identity = 174/383 (45.43%), Postives = 236/383 (61.62%), Query Frame = 1
Query: 634 GMMGGMGMGMGDKTVRELFVGNTPQGTSDFVLLEFLNAAMKQVNLNTSAGNPVVTCRVNNKYAFVELRSPEECSNALNLNGIPFMGQMLKIGRPSKYQGPMTPASTWQRLTGQEAADNV------------VDPATKVYRELYIGNTSPDMTDMVLKDFLSNTMAKVGLSTKEGSPIIHARVSGNFAFVECRSVEETTSLLNLNNIPFLGKELKINRPSKYPGPETPHMNWPDILASRFTSG------NPNASLPAPATAYGGMESAQAAAHAAVAALGVVSVARPTTTLRLNNMLTNEDLRDEAGLGDIEEETKEECEKFGSVKSVHIPRGSTTNEQEKPGVGYVFVAFDAVESAAKAAASLRARTFDGRKVEVTYWDEEKF 1728
G MGG G G K RELFVGNTP GTS+ +L++FL+ AM +VNL P+VTCR N+K+ F+EL + + + ALNLNGIPF+G L++ RPSKY GP P+ TWQ+LTGQ + + K+ REL+IGNT+P+MT +L+DFL M +VGLST G+PI+ R S FAF+E RS++E + LNLNNIP+LG +L++ RPSKY GPETPH NW DILA +F SG N + P A+ +A + A + + + S A P+ + L +MLT +DL D+ DI E+T++EC FG++K++ IPR + PG +F+ + E A KA A L RTFDGRKV Y+D KF
Sbjct: 56 GTMGG-GSGPDTKLSRELFVGNTPPGTSEALLMQFLSGAMSRVNLCPPDVTPIVTCRKNDKFCFIELATVDLANKALNLNGIPFLGSSLRVARPSKYSGPHVPSQTWQQLTGQPLPPGMAAVPENTGVTMALSGEDKLSRELFIGNTTPEMTAEMLRDFLGRAMEQVGLSTMPGNPIVTVRPSAKFAFIEVRSMQEAANALNLNNIPYLGAQLRVGRPSKYSGPETPHGNWEDILA-KFMSGELHLKNNATQANPLVQQAHAVAAAASSLAPSLASVPPLASKASPSPVVELRHMLTQQDLDDDNEYNDILEDTRDECSSFGTLKNIVIPR-------KGPGATKIFLEYMTAEDAGKAIAGLAGRTFDGRKVTAVYFDTVKF 429 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1247.1871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1247.1871.1 >prot_F-serratus_M_contig1247.1871.1 ID=prot_F-serratus_M_contig1247.1871.1|Name=mRNA_F-serratus_M_contig1247.1871.1|organism=Fucus serratus male|type=polypeptide|length=579bp MADNGASNGRDNREDVDDHRARSRSRERRRRRSRSDSRESRSSRKHRRRSback to top mRNA from alignment at F-serratus_M_contig1247:128434..151133+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1247.1871.1 ID=mRNA_F-serratus_M_contig1247.1871.1|Name=mRNA_F-serratus_M_contig1247.1871.1|organism=Fucus serratus male|type=mRNA|length=22700bp|location=Sequence derived from alignment at F-serratus_M_contig1247:128434..151133+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1247:128434..151133+ >mRNA_F-serratus_M_contig1247.1871.1 ID=mRNA_F-serratus_M_contig1247.1871.1|Name=mRNA_F-serratus_M_contig1247.1871.1|organism=Fucus serratus male|type=CDS|length=3474bp|location=Sequence derived from alignment at F-serratus_M_contig1247:128434..151133+ (Fucus serratus male)back to top |