mRNA_F-serratus_M_contig1243.1862.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 338 bits (868), Expect = 4.610e-111 Identity = 162/248 (65.32%), Postives = 201/248 (81.05%), Query Frame = 1
Query: 7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
Q AE EGLEG+E LDDNDLGFQ LNSFGLGYRL ++S +K+R L+GA SLYD+R+ +NIPAFWSW NP++ P+WERA+NVDMIMNMEIMLWA+VNGG+ Y++ V +HADTTW D+VRDDYST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG M+YRYLKE +FL ++ L YF DNLP D +P ADFDAPV + DN KDSSATAIV SALFE++ TG+ YL A+++
Sbjct: 19 QTYAEDMQEGLEGIEVLDDNDLGFQTLNSFGLGYRLVGTTS----FKDRTLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEF 261
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 332 bits (851), Expect = 6.450e-111 Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1
Query: 16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETG 717
AEF+C GLEG+E +DND GFQ+LNSFGLGYRL+ S D Y +RVLTGA++L+DFRW NIPA+WSWENP+ RP+W+RA+NVDM+MN+EI+LWA +NGG E V HAD+TWKDIVR+D ST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG M+YR+L E +FL RS+ LKY++DNLP D IPPADFDAP SATDNGKDSSA AIV+S L E++ ETG
Sbjct: 110 AEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----DDYLQRVLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 337 bits (863), Expect = 2.150e-109 Identity = 164/245 (66.94%), Postives = 198/245 (80.82%), Query Frame = 1
Query: 16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
AE EGLEGVE LDDNDLGFQ LNSFGLGYRL S +KER L GA+SLYDFR+ +NIPAFWSW+ PS P+WERA+NVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+DYST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG M++RYLK+ +FL RS+ L YF DNLP D +P ADFDAP ++ DN KDSSATAIVASALFE++ TG+ YL A+++
Sbjct: 22 AEDIQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGKGS----FKERTLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEF 261
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 335 bits (859), Expect = 6.630e-107 Identity = 159/245 (64.90%), Postives = 196/245 (80.00%), Query Frame = 1
Query: 16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
AEF+C GLEG+E +DND GFQ+LNSFGLGYRL+ S + Y +RVLTGA++L+ FRW NIPA+WSWENPS RP+W+RA+NVDM+MN+EI+LWA +NGG E VA HAD+TWKDIVR+D ST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG M+YR+L E +FL RS+ L+Y++DNLP D IPPADFDAP SATDNGKDSSA AIV+S L E++ ET D YL ++ Y
Sbjct: 147 AEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----EEYLQRVLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTY 386
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 328 bits (842), Expect = 1.880e-106 Identity = 157/239 (65.69%), Postives = 192/239 (80.33%), Query Frame = 1
Query: 16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYL 732
AE EGLEGVE LDDNDLGFQ LNSFGLGYRL +SS +D L+GA SLYD+R+ +NIPAFWSW NP S P+WERA+NVDMIMNMEIMLWA+VN G+ Y++ +HADTTW D+VRDDYSTFHVADY+ TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RYL++P+FL + L YF DNLP D +P ADFDAPV + DN KDSSATAIV SALFE++ +TG+ YL
Sbjct: 80 AEDMQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGTSSFKDI----TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYL 313
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE) HSP 1 Score: 211 bits (538), Expect = 5.310e-64 Identity = 113/239 (47.28%), Postives = 149/239 (62.34%), Query Frame = 1
Query: 34 GLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
GLE VE +DDND+G Q LNSFG +RL ++S Y R A +LY+ R+ NIPAFWSW NP + P+WER +NVD+I+N EI+LWA+VNGG Y+ A D G G YQG+ D+STW+RGQAWA+YG M++RYLK+ +FL+ ++ L YF D+LP D +P ADFDAPV + DN KDSS TAIV SAL E++ G+ YL A+++
Sbjct: 11 GLEEVERMDDNDVGLQTLNSFGQVHRLVNASH----YHARTRAAAQTLYNLRYDENIPAFWSWANPKNEPQWERVVNVDVIINTEIVLWAAVNGGKANYSAAAARAR---------------------ADLG-----GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDS-DNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEF 218
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT) HSP 1 Score: 211 bits (537), Expect = 2.300e-62 Identity = 113/242 (46.69%), Postives = 155/242 (64.05%), Query Frame = 1
Query: 31 EGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWER-AINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYF---DDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
+G+ DND GFQ+ +FG L + D Y ++ GAD+L D RW +NI AF +W S P E +N+DM+MNMEI+LWAS +GGNT +A+ HAD +W+D+VRDDYSTFHV DY+ D G + + T+QG+ +STW+RGQAWAVYG M+YRY + P+ L+R+ YF + D +P +DFDAP+ + +N +D+SA AIVASA E+Y TG+ KYL AE
Sbjct: 102 QGVRSRATATDNDTGFQIYCAFGTALMLGADVDTSD-YTSVIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAE 340
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL) HSP 1 Score: 189 bits (479), Expect = 3.230e-54 Identity = 105/246 (42.68%), Postives = 148/246 (60.16%), Query Frame = 1
Query: 7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRP-EWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPS---DGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYL 732
Q+ AE + EG+ DND GFQ+ NSFGLGY + S D YK+ ++ GA +L R+ +I AF SW S P +N+D +MNME++LW + + + HAD TW+ VR++ ST+HV Y P +G++V++ T+QG+ STW+RGQAW+VY M YRY + L+RS+ +YF ++ D +P +DFDAP+ DN +DSSATAIVASAL E+Y T KYL
Sbjct: 103 QQYAEHWTEGVRSRAYATDNDTGFQIFNSFGLGYTMGKKPS--DDYKQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPFEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYL 344
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F) HSP 1 Score: 189 bits (479), Expect = 3.230e-54 Identity = 109/253 (43.08%), Postives = 152/253 (60.08%), Query Frame = 1
Query: 7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYF---DDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
Q+KAEF+ EG+ DND GFQV +SFGLGY + +S D YK+ + GA++L R+ +I AF SW +NP++ P +N+D +MNME++LW N Y + HAD TW+ VRD+ ST+HV Y+ D G + + T+QG+ +STW+RGQAW+VY M YR+ + L+RS+ YF +D +P +DFDAP+ N KD+SATA+VAS L E+Y T D KYL AE
Sbjct: 102 QKKAEFWTEGVRSRAYATDNDTGFQVFDSFGLGYTIGGVTS--DDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPF---EVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAE 347
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605) HSP 1 Score: 186 bits (473), Expect = 2.180e-53 Identity = 107/253 (42.29%), Postives = 154/253 (60.87%), Query Frame = 1
Query: 7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLP---SDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
Q++A+F+ +G+ DND GFQ+ +SFGLGY L +++ YK+ ++ GA+++ + R+ NI F SW +NP+ P +N+D +MNME++LW N Y E HAD TW+ +R + ST+HV Y D G +V++ T+QG+ +STW+RGQAW+VY M YRY + L+RS+ +YF + D IP ADFDAP+ N +DSSATAIVASAL E+Y T + KYL AE
Sbjct: 97 QQRAKFWTDGVRSRAYATDNDTGFQIFDSFGLGYTLGGNAT--PDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPF---EVNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAE 342 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1243.1862.1 >prot_F-serratus_M_contig1243.1862.1 ID=prot_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=polypeptide|length=250bp MPQEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKEback to top mRNA from alignment at F-serratus_M_contig1243:277199..279859- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1243.1862.1 ID=mRNA_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=mRNA|length=2661bp|location=Sequence derived from alignment at F-serratus_M_contig1243:277199..279859- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1243:277199..279859- >mRNA_F-serratus_M_contig1243.1862.1 ID=mRNA_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig1243:277199..279859- (Fucus serratus male)back to top |