mRNA_F-serratus_M_contig1241.1851.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1241.1851.1
Unique NamemRNA_F-serratus_M_contig1241.1851.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: D8LQR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR6_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.090e-69
Identity = 111/172 (64.53%), Postives = 136/172 (79.07%), Query Frame = 3 
Query:  231 VPVATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRSTHTQRVKAGETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFN 746
            +PVA V+C+AVG PYL LG QHY   G ++  AQ VLLFL IN++ICLWELCLCYK+ LIRSTH +RVK G+T+S  IVVFR MR SEILSPSFW+ IWIDY+RFD +Y    SAG+N+D+ NGH+TL P+LFL+ SMV P+   K+TGMV L+ HYQMLY SL+YF +FFN
Sbjct:    5 IPVAAVVCLAVGVPYLSLGYQHYAAFGGVNVAAQLVLLFLCINVVICLWELCLCYKHALIRSTHAKRVKDGQTKSVTIVVFRWMRFSEILSPSFWANIWIDYARFDDAYVQPVSAGFNIDVGNGHTTLLPSLFLLASMVRPLADPKITGMVGLLAHYQMLYLSLLYFYAFFN 176
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A0L0FZ44_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FZ44_9EUKA)

HSP 1 Score: 189 bits (480), Expect = 3.330e-53
Identity = 93/221 (42.08%), Postives = 144/221 (65.16%), Query Frame = 3 
Query:  237 VATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRSTHTQRVKAG----ETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFSAWQ 887
            V  ++C+ +G P +  G  HY+T+G  +  AQ+++LFL +N LICLWEL L YKY  I + HT+R+K      + +S   +  + + +++   P  WSQIWIDY  +DPSYAD  + G+N+D+ NGHSTL P+L + VS++ PIF AKVTGM+ +++ YQ  YG+++YF S+ N   +   + ++ I  VL    +W+VFP++G Y   +LIME+SF+  Q
Sbjct:    3 VIILLCLLMGPPVIVCGFLHYVTYGW-NSSAQALILFLLVNTLICLWELVLYYKYDRIHNKHTKRIKDNFYTTQPQSEDFIFVQDVPITKAFCPDLWSQIWIDYGYYDPSYADKTTFGFNIDVGNGHSTLLPSLLMAVSIISPIFSAKVTGMLGMLLFYQTWYGTVVYFFSYVNCGRYLKSAWSD-IGVVLFANCIWIVFPVLGFYCSVKLIMEESFACLQ 221
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A7S4NL81_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NL81_9EUKA)

HSP 1 Score: 167 bits (424), Expect = 8.690e-45
Identity = 79/188 (42.02%), Postives = 120/188 (63.83%), Query Frame = 3 
Query:  327 AQSVLLFLSINLLICLWELCLCYKYRLIRSTHTQRVKAG--ETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEV--IAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFS 878
            A SVL F  INLLICLWEL LCY Y  I  TH  R+K+G  +     IV+F+ + L ++    FW+ +WIDY R+D +YAD  + GYN+D+ NGHS+L P++ ++    +    A++ GM+ L+ +YQMLYG+L+Y+ S+F   S +   Q     +  VL   ++WV+FPL+GMY    +IM++S++
Sbjct:   52 ALSVLFFFPINLLICLWELILCYNYEFIHKTHQDRIKSGFYKKMDAPIVLFKDISLGQLFCTDFWAYVWIDYCRYDSAYADKTTFGYNIDVGNGHSSLIPSILMITFCYYEYLDARIAGMIGLLSNYQMLYGALVYYFSYFCGASARTHLQDRFNGLGIVLFANILWVIFPLLGMYASGAMIMDNSYA 239
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A0S8ETM9_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium SG8_38_1 TaxID=1703408 RepID=A0A0S8ETM9_9DELT)

HSP 1 Score: 135 bits (339), Expect = 9.010e-33
Identity = 76/225 (33.78%), Postives = 124/225 (55.11%), Query Frame = 3 
Query:  228 TVPVATVICMAVGAP---YLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRSTHT---QRVKAGETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFSAW 884
            T+P A VI + V A    ++WL   H  THG  +     +  FL +N++I  WE+ L  +   I++ +    +  +  E  +   V  R + +  I S   W++IW  YS FDP Y+D RS GYN+D+ NG +T+ P       M + +   +V G+V +++ +QM YG+ +YF  FFNN  H+  S  +V+  V    L+W++FPL+G+Y   RLI+E S++ +
Sbjct:   11 TIPTAFVIGVVVVAGTGLHIWL---HQRTHGLYNITQIGLAFFLVVNVMIAWWEIALFVEQDQIQAEYDAIREPYRGREMAAVAQVFSRPIPILRIFSFREWTRIWSTYSLFDPGYSDRRSFGYNIDVGNGFTTILPATLFAFGMTFNLVPPRVLGIVGIIIFWQMFYGTAVYFFQFFNNDRHRGHSVRDVLLFVGVSNLLWLIFPLLGLYTSVRLILEGSYAVF 232
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A6L7KDC7_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7KDC7_9BACT)

HSP 1 Score: 133 bits (335), Expect = 2.510e-32
Identity = 80/224 (35.71%), Postives = 122/224 (54.46%), Query Frame = 3 
Query:  216 GSMATVPVATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRS-THTQRVKAGETRSTKIVVFRSMR--LSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFS 878
            G  A + VAT+    +GA         Y  HG L G    + LFLSINLLI  WE+CL  +  L+ + T   R     T  T  + F   R  L  +LSP+ W+ IW  YS++D SYAD R+ G+NVDI NG  T  P+L +  +  + +F A +TG+V +++ +Q++YG+ +Y +SFF       IS+ E+   ++ P   W+   L+G+Y   RLI++  + 
Sbjct:    4 GLFAALVVATLTLAGIGA--------RYQVHGDLHGLHSLLSLFLSINLLIAYWEICLFLRRDLVETRTAYWREWRKRTGRTPAIEFLRARVPLVRMLSPTLWADIWAVYSQYDSSYADRRTFGFNVDIVNGFLTPVPSLIVYAAYTFEVFPAVLTGIVGVILFWQVMYGASVYLISFFVAGRQARISRRELYTWIMAPNSPWMAGGLLGVYVSIRLIVDGDYG 219
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A7X4IYF9_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7X4IYF9_9BACT)

HSP 1 Score: 132 bits (332), Expect = 1.690e-31
Identity = 83/224 (37.05%), Postives = 121/224 (54.02%), Query Frame = 3 
Query:  216 GSMATVPVATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRSTHTQ-RVKAGETRSTKIVVFRSMR--LSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFS 878
            G  A + VA +    VGA Y   G    + H  LS       LF SINLLIC WE CL  K   I +     R + GET  T  + F   R  L++ LSP+ W+ +W  Y++FD SYAD R+ G+NVDI NG +T  PTL L  +  + I  A  +G++ +++ +Q+ Y + +Y VSFF       IS+ E+   +L     W++ PL+G+Y   RLI++  +S
Sbjct:   40 GLFAVLVVAALASAGVGARYCARG-DFDVIHAVLS-------LFFSINLLICYWEACLFLKRDYIETRAGYWRKRRGETGKTPALEFLLTRVPLTKTLSPTLWADVWATYAQFDDSYADRRTYGFNVDIANGFATPVPTLVLYAAYTFDIMPALASGIIGVMLFWQLTYMTSVYLVSFFVADRQARISRGEMYIYILAMNSPWILCPLLGLYVSVRLILDGDYS 255
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A7Z7HR61_9PROT (Uncharacterized protein n=1 Tax=Sterolibacterium denitrificans TaxID=157592 RepID=A0A7Z7HR61_9PROT)

HSP 1 Score: 130 bits (327), Expect = 3.330e-31
Identity = 75/217 (34.56%), Postives = 117/217 (53.92%), Query Frame = 3 
Query:  246 VICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLI---RSTHTQRVKAGETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFN-NRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFSAW 884
            V+ +A+    +W    H+   G  S     V+ FLS+N++ICLWE+CL  +  LI      + +R    + +     V   + LS +LSP +W  +W  YS FD SYAD R+ G+N+D+ NG  TL P L L     +    A V G+VAL   YQ+ Y + +Y+ +FFN  R H+  S AE +  +      W +F L+G+Y   RL++E+S++ +
Sbjct:    9 VVLVAIFGASVW---NHHQVTGNFSVVYLLVMFFLSLNMIICLWEMCLFARIDLIAQKNEAYRKRFPNDKNQPVLDFVTSKVTLSNVLSPDYWCDVWATYSLFDGSYADKRTLGFNLDVGNGFWTLIPCLILHFGFTYHFLPANVIGIVALCFFYQVTYCTGLYWFAFFNVGRQHQN-SSAENLIYIWGTNCPWFIFGLIGLYASVRLVLENSWAVF 221
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A7Z7MVT2_9PROT (Uncharacterized protein n=2 Tax=Sterolibacterium denitrificans TaxID=157592 RepID=A0A7Z7MVT2_9PROT)

HSP 1 Score: 130 bits (326), Expect = 4.600e-31
Identity = 75/216 (34.72%), Postives = 115/216 (53.24%), Query Frame = 3 
Query:  246 VICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIR---STHTQRVKAGETRSTKIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFSAW 884
            V  +AV     W    HY   G  S     V+ FLS+N+L+CLWE  L  +  LI    + + +R  A + R     +F  +  S + S  +WS +W  YS FD SYAD R+ G+N+D+ NG+ TL P L L +   +      V G++AL   YQ++Y + +Y+ SFFN    +  S+ E +  +      WV+F LVGMY   RLI+++S++ +
Sbjct:    9 VFLVAVFGATAW---NHYQLLGGFSVVYLLVIFFLSLNMLVCLWERVLYLRIDLIEKKNADYRRRFPADKNRPVLDFIFSKVAFSNLFSADYWSDVWATYSLFDGSYADKRTLGFNLDVGNGYWTLIPCLLLHLGFTYHFLPPNVIGIIALCFFYQVVYCTSVYWFSFFNVGRQRLNSRNENLVYIWGTNCPWVLFGLVGMYAAVRLILDNSWAVF 221
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A2R5G1A3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1A3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.250e-31
Identity = 75/214 (35.05%), Postives = 121/214 (56.54%), Query Frame = 3 
Query:  249 ICMAVGAPYLWLGCQHYLTHGRLSGGAQSVL-LFLSINLLICLWELCLCYKYRLIRSTHTQRVKAGETRST-KIVVFRSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWP--IFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNR--SHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDS 872
            + + VG  +  L   H++ HG L    Q+ L LFLSIN+LICLWE+ L +    I++    R K  E        +F    L++ L+PSFW+Q+W  Y+  D SYAD+ S G+ +DI NG + L P+L   V M     +  A+V G++ L   YQ  YG+++YF+ +  +R  +    +  ++ + V+C  ++W+VFPL+G+Y   +LI+ D 
Sbjct:    7 VVIFVGGLFASLVAWHHVEHGVLLQPLQTALALFLSINVLICLWEIVLFFYVDKIKAEFDGRKKKVERGYIGSFFLFEEASLAQALTPSFWTQVWSTYALVDRSYADTHSYGWAIDIGNGFTMLVPSLIFAVGMTLQEKLMPARVLGIIGLFSFYQGFYGTVLYFMQYCVHRRWNDHGSTPFQIFSMVICTNIIWMVFPLLGIYASCQLILSDD 220
[Close]
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Match: A0A6I4ZJH7_9CHLR (Uncharacterized protein n=4 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZJH7_9CHLR)

HSP 1 Score: 129 bits (324), Expect = 1.300e-30
Identity = 74/218 (33.94%), Postives = 117/218 (53.67%), Query Frame = 3 
Query:  234 PVATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSINLLICLWELCLCYKYRLIRS-THTQRVKAGETRSTKIVVF--RSMRLSEILSPSFWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIFGAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTLVWVVFPLVGMYQGYRLIMEDSFS 878
            P A ++ +AV    L      Y+ HG +      + LFLSINLLI  WE+CL ++   I       R +  +T  T  V F   S+ L+ +LSP+ W+ +W  YS +D +YAD  + G+N+DI NG +T   +L L V+    +  A   G+V  ++ +Q +Y S +Y VSF   R    I++ E    +  P  +WV+FP++G+Y   RLI++  +S
Sbjct:   17 PPALIVVVAVALLALPGIAARYVVHGDVGAFHCLLSLFLSINLLISYWEMCLFFRRDYIEERVEFWRRRRDDTGKTPAVEFLTTSVPLNRMLSPTVWADVWATYSMYDSAYADRNTYGFNIDIANGFTTPASSLLLYVTYTGELLPAIAAGIVGAMLFWQWVYASSLYVVSFLVGRKQTRITKREFWIYIFNPNAIWVLFPMLGLYVSIRLILDGDYS 234
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1241.1851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQR6_ECTSI2.090e-6964.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0L0FZ44_9EUKA3.330e-5342.08Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S4NL81_9EUKA8.690e-4542.02Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A0S8ETM9_9DELT9.010e-3333.78Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A6L7KDC7_9BACT2.510e-3235.71Uncharacterized protein n=2 Tax=Acidobacteria bact... [more]
A0A7X4IYF9_9BACT1.690e-3137.05Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A7Z7HR61_9PROT3.330e-3134.56Uncharacterized protein n=1 Tax=Sterolibacterium d... [more]
A0A7Z7MVT2_9PROT4.600e-3134.72Uncharacterized protein n=2 Tax=Sterolibacterium d... [more]
A0A2R5G1A3_9STRA5.250e-3135.05Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A6I4ZJH7_9CHLR1.300e-3033.94Uncharacterized protein n=4 Tax=Dehalococcoidia ba... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1241contigF-serratus_M_contig1241:111409..129187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.8
Seed ortholog evalue2.6e-57
Seed eggNOG ortholog2880.D8LQR6
Hectar predicted targeting categorysignal peptide
EggNOG OGs2D1JK@1,2S4W9@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_002010.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1637
Cds size681
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929169.509295-UTR-F-serratus_M_contig1241:111408..1116171622929169.509295-UTR-F-serratus_M_contig1241:111408..111617Fucus serratus maleUTRF-serratus_M_contig1241 111409..111617 +
1690962734.0479977-UTR-F-serratus_M_contig1241:111408..1116171690962734.0479977-UTR-F-serratus_M_contig1241:111408..111617Fucus serratus maleUTRF-serratus_M_contig1241 111409..111617 +
1622929169.6237435-UTR-F-serratus_M_contig1241:128440..1291871622929169.6237435-UTR-F-serratus_M_contig1241:128440..129187Fucus serratus maleUTRF-serratus_M_contig1241 128441..129187 +
1690962734.1068118-UTR-F-serratus_M_contig1241:128440..1291871690962734.1068118-UTR-F-serratus_M_contig1241:128440..129187Fucus serratus maleUTRF-serratus_M_contig1241 128441..129187 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929169.5286448-CDS-F-serratus_M_contig1241:111617..1118541622929169.5286448-CDS-F-serratus_M_contig1241:111617..111854Fucus serratus maleCDSF-serratus_M_contig1241 111618..111854 +
1690962734.060643-CDS-F-serratus_M_contig1241:111617..1118541690962734.060643-CDS-F-serratus_M_contig1241:111617..111854Fucus serratus maleCDSF-serratus_M_contig1241 111618..111854 +
1622929169.5431802-CDS-F-serratus_M_contig1241:126703..1269251622929169.5431802-CDS-F-serratus_M_contig1241:126703..126925Fucus serratus maleCDSF-serratus_M_contig1241 126704..126925 +
1690962734.0680184-CDS-F-serratus_M_contig1241:126703..1269251690962734.0680184-CDS-F-serratus_M_contig1241:126703..126925Fucus serratus maleCDSF-serratus_M_contig1241 126704..126925 +
1622929169.556537-CDS-F-serratus_M_contig1241:127243..1273291622929169.556537-CDS-F-serratus_M_contig1241:127243..127329Fucus serratus maleCDSF-serratus_M_contig1241 127244..127329 +
1690962734.081291-CDS-F-serratus_M_contig1241:127243..1273291690962734.081291-CDS-F-serratus_M_contig1241:127243..127329Fucus serratus maleCDSF-serratus_M_contig1241 127244..127329 +
1622929169.5670147-CDS-F-serratus_M_contig1241:127955..1280551622929169.5670147-CDS-F-serratus_M_contig1241:127955..128055Fucus serratus maleCDSF-serratus_M_contig1241 127956..128055 +
1690962734.0897427-CDS-F-serratus_M_contig1241:127955..1280551690962734.0897427-CDS-F-serratus_M_contig1241:127955..128055Fucus serratus maleCDSF-serratus_M_contig1241 127956..128055 +
1622929169.5785613-CDS-F-serratus_M_contig1241:128404..1284401622929169.5785613-CDS-F-serratus_M_contig1241:128404..128440Fucus serratus maleCDSF-serratus_M_contig1241 128405..128440 +
1690962734.0985847-CDS-F-serratus_M_contig1241:128404..1284401690962734.0985847-CDS-F-serratus_M_contig1241:128404..128440Fucus serratus maleCDSF-serratus_M_contig1241 128405..128440 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1241.1851.1prot_F-serratus_M_contig1241.1851.1Fucus serratus malepolypeptideF-serratus_M_contig1241 111618..128440 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1241.1851.1

>prot_F-serratus_M_contig1241.1851.1 ID=prot_F-serratus_M_contig1241.1851.1|Name=mRNA_F-serratus_M_contig1241.1851.1|organism=Fucus serratus male|type=polypeptide|length=227bp
MKGSMATVPVATVICMAVGAPYLWLGCQHYLTHGRLSGGAQSVLLFLSIN
LLICLWELCLCYKYRLIRSTHTQRVKAGETRSTKIVVFRSMRLSEILSPS
FWSQIWIDYSRFDPSYADSRSAGYNVDICNGHSTLPPTLFLMVSMVWPIF
GAKVTGMVALVMHYQMLYGSLMYFVSFFNNRSHKAISQAEVIAAVLCPTL
VWVVFPLVGMYQGYRLIMEDSFSAWQ*
back to top

mRNA from alignment at F-serratus_M_contig1241:111409..129187+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1241.1851.1 ID=mRNA_F-serratus_M_contig1241.1851.1|Name=mRNA_F-serratus_M_contig1241.1851.1|organism=Fucus serratus male|type=mRNA|length=17779bp|location=Sequence derived from alignment at F-serratus_M_contig1241:111409..129187+ (Fucus serratus male)
GCTGCGTTTCCATTGTCTGTGTCGAGGACGCTCGCGAAACTTGACACACT
ATACTCGTACGTGTTCAATACTATTGTCGGAAACTTAACATACGGGACTG
GTGACTCCCGCGGCTGCGAAAACGTCGAGCCTGGGCCTTAACTGCTGTTC
CCACCTGCCTGACGCCTGGTTTCCCTTCAACGGCACTGTAAATACGGGTA
TATTTATTGATGAAAGGAAGCATGGCGACCGTGCCCGTAGCGACTGTGAT
ATGTATGGCCGTTGGAGCTCCTTATCTCTGGCTCGGCTGCCAGCACTACT
TGACGCACGGTCGCTTGAGCGGCGGGGCGCAATCTGTTCTTCTGTTCCTC
TCCATCAACCTATTGATTTGCCTGTGGGAGCTGTGTCTGTGCTACAAGTA
CCGCTTGATCCGCTCGACACACACCCAGAGGGTCAAGGCCGGCGAGGTGC
GTTTGCAAAATAGTTTTTATCTTCCATCTCGTGTAAAATTGTGCCCATTT
TACTCTGCTACGAGTATATGATAGCTGCGAATTGGCTATGCCAAGATTGC
TGATTTTTTTTTAACCGATACAGCACGACGTCGTACTTGTGGCACCGCCC
ATGCCTCGGTAATTCTGTTTTGTATTGTACTAAAAATAGTATGTAGAGAG
CTCCAAAAGAAAGTTTTGACCATTAATTCTACCATTTGTACTCGTTTTTA
ATACTACAGCAGTGAAAACTTAGACATTATCCAAACGATATACAAGGTCG
CCCTCCAGTCTCTAATACCTTACGTAGTTGAAATCGAAATTACTATTTCG
ACACACGTGAGCTATAAATACTACGTGACTTCTTTTAGTAGTACAAGTAT
GTATGTATATGTGTATGGTCATCACATATAGCAAGAGTCTGGATCAACCA
GGTAAGGTTGCCAATCCTGCTCGTGGCCAGCTGAACAGGGAAAATGAATA
TTTCCCTGTCCCCGTGCGTGCCGGAGAATTTGGTCTCGCGAGACGGGTTC
AGCCGTCCCGTCCCGCGTCAGCCTGCTCATGTTCATACTCAGGCTGAATC
TGGTGCTTACTTTCGGAATTCCTCCCGGGTTCCGCGGCGGCGTCCATTTA
TGGAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCA
GTTGCGTACGGATGGCGTTCACTGCCGAGAGTCCGCCGGCACGGGGCCAG
CAAAACCTCACGGTAGTTCCGAACGAATGCTGCCTTGGCAGGTCACTGTG
GGCCAATTAATATTCGCCTCCTTTTTTATAATAAGGCGTAACTGATTTTG
ACGATTCGCGCGTATAAATATGTCTTTACAGGGGGATAAGATTTTAAACA
GCAGTACCGGCGCAGTACCGACTAGCTTACTTCGTATGAAGCTTTTGAGT
TCTCGCAATCGGGTTCATATAGCCGTTACTTTCAACATACCCACTTCATA
CCAATAATAGTATAGTGGGTCCGGGAAAGAGAGGTGTATATTAAATGGTC
CATGGTGACTTGCTAAGGCAGCACTCGTTCGGAACTACCTTGAGTTTTAC
TGGCCCTGTGCCGACGGACTCTCGGCAGTGAACGCCATCGGTACGCAATT
TCGTGACCCAATAAACTCGGGACTTACCCGATGGCGTATGGCGGTTTAAT
ATAAATATACGGAGAGGACGGGGTGGGAAGGAGGAAGAGGGGACCGATTG
CGTCCAGAGCGACATCCGGTCGTTTGGCATAGCCGGGGATTGGAAAGCGA
CGGCGTTAAAGGCTAAGGTGTGGGTTGATACGGTCTCGGAGGGTGGGCGG
AGGTTCATGGCTGCGTGGAGGAAAGAAGAGATAGACGCGGCTAGACATCG
CCAGGGGAAGATAGAGGCAACGAGACTGGGAAACCTGTTACCGCAGACGG
GAGTGTAGAATTTTGTGAAGCCACACCCATTGGCCTAGTCGACGAGCCGA
ATATATCCTTGTACAGACGCGAGACCGACCGAGACCTGCGTAGCACCTGC
AGATGCGTCGCTTGGTTTTGATTTTGATTTATTTTTTCTCCGAACGAGCA
GTGTGTGTGTGGGGGGGTATGCTGCCAGACTTTTTCTTTTGCTCTCTTTT
CCCTGTTCAGCAGACCACGAGCGGGATTGGCCACCGTGTAAAGTAGTTTG
TTCGGGTTGGCAACCAGATTCAGTCTGAGTATGAAGATGAGCAGGCTGAC
GCGGGACGGGGCTGCCGAAACCGTCTCGCGAGACCAAATTCTCAGGCACG
AACGCGGACAGGGGAATATTCTTTCCAGCCACCATAGTCAGTCATTTCAC
AGTACACTGTTTTGATACCCCAAGTAGTATACACCTGCTTCGTCTCTAAC
GCCAGGTGTTGGGCACTTGCAGATGCCAGACTGGTAAGATATTTTTCTGG
GAAGTAACTTTAAAGTCAGGTGAAGAGGAAAGGTGGTTTGGGGTTTGCAC
ATTGTACCGTGCACAGGTGTGCGGGGCTGAATTACGGTGGGTCGTCGCTG
AGCCGTATCTTGGGTGCTTCCAGCTTGGGACGTTGCTTTTACTGGGGCTC
CTAATCTCGCTTTCTAATCAAGGCTGTAACATACACAGATGGTTGATCGC
CTGTCAAGCCCTCTCAAGTACCAAGAAGGTTGACGAAAGCTTTCTCACCC
CCCCCTAAGCTTTCCCCGCTTTCCAAATTTTGAAAGAAACTTGTGGAAAC
CCGTTCCAAATTTTGAAGCAGTAAATTCCAAACTTTTCGATTGTATAGGA
AAAAGAGAGGCTCACATTACTTGGTTCTCCCGTTTCTCGaAACTACATTG
AGGATTATGACTACTGGCCCTGTTCCGGCGGACTCTTGGCAGTGAACGCC
ATCGGAACGGAACTGCGTGACCTAATAAACTCGGGACTAACCCGATGGGG
GTTGGCGGTATATATAAAGGGCAGCCGTCGCTGAAAATGAGAGGAATCCC
GTGACTGAGCCCCAGATTATGCTTGTGGTTCAGCATGAGTGTGGAGAATG
AGCGAGCAGACTGACGCGGGACGGAACGACTGCCGAAACCGTCTCGCGAG
ACTTAATTTTCGGGCGCGAGTGGGGACAGGGGAATGTTCATTTTCCCTGT
TTAGCTGACCACGAGCAGGATTGGCAACCTTATTACCTGGTTGATCCATA
CTCTTGCTATATGTGTGACCATACATAGTATACAGTACTGCTGATGACTT
CTATGTATGTATGATCATCACTTTTACCTACAATGCCTGCACATGGGTCT
ATAGGTGATATATAAATCATTTCAAACGTTTGAGGCTCACGCTCTTTGAT
GTAGCTAACTGATTCTATGCGGTGACGGCCTCGTAGGGTTGTTCGTTGTT
CCTGACATGTTGAGTCATCGGTTTCAAAGATATAGTTACAGTTTGTTTTG
TCCCCCGGCAACCTTTTTATCTGGACGTCGAAATAATGGCGGCTTGAAAA
AAAATGCCGAATCCAAAACAAAACAGAAAACTCCTAAATCCCATTGGTCC
CCTTGACCTCAAAGTATAGATCAAACTTACTAACTTACGCTAGATGGGAA
ATAATACAAGTGTACAAAATGTGAATGGACTAATCAAGAATGTTAAAATA
GAGACGTATCTTGCAAATTACATGGCCGTTGAAAATTAGAAAGCTATAAA
ATCCCATTGGTCCCCTTGACCTGAAGTAGATCTAACTTAACATACGCAAT
CTGGGAAAGAATACAAGTGATACGATGTGAATGGACTATTCAGGTACTGT
ATGTTAAAATAGAGGCGTATCTTTTAAACTAGCTGGCCGTTGAAAATAAT
AAAGCTATAAAATCAACATTCCCTATATTGGGAAAGAATGATTGATTGAT
TTATTGAATTCTCACATAATAAGCTCATGTCAAAAATCCAGCCCGTGGTC
ACAAGGTAGAAAACACCATTTGGAAAGAAAGAACGTACGGCGTACTCTCC
ATACAAAGAGAAGGCGGAAATAGTACAAAAATATTCGGAGAAAGCGACAT
CTCCAAAATAAACAAAAACATACCAGTAAAAAGAAAGAAACACGTGTGAC
TATCGGGGCGCCTGCATATCGAAGGACGATTGAACGAAATAAGGCCGCGG
CTTCAGCGAGAGCATAAGGACGAAAAACGAAGCAAAAACAAACGTAACAC
CCAGAGAAAGACGTCATGACATCTGCAAACAGAACGTCCGGAGGATGCCA
GTTCGCGCCACTTGTGGCTAGTCAACAAGGGCGAGCGAACCAGCACGAGC
CCGCTTGCTTTGGGCTATCCTCTTCTTGGTCCTTCCCGTCACGTTCGGGC
ATACCACTTCATGCCGGAGTTCAGCCTTGACTTTCTCTGCAGCGATCCAT
TTTGCCATGAAATGTTCCGCCCCTTGTTCTGCCGTTCTGCGCCATTTTCC
CTCGTCCTGGGCTGCAGTCATCCACTGATTGGCGTTGATGCCGAAAGCTC
CGAGATCGTCCAGGAAACAACCCATCCACTCGTTTTCCTGGCCCCCCACA
CAGCCCGCGCCCCCCACTATTTCTCCGAACATCACGCACTTCGGCAGTCT
CGTATCCCCCATGCGCGCCACAAATCCCGCAAACAAGATACGCCTCCTAC
GCAAAGTCGCCTCGATGCTACAGGCATACGATGTGATAGAACTATTCAAA
TATGTTAAAAGGAGAGTCGTATCTTCCAAACTAGCTGGCCGTTGAAAATA
AGAAAGTTATTTGATTTACAAGTAGAACACGTACATCTCTAACGAGCATG
ATAACATTTGAGTATACTTTTTGCTTTTTTAGAGCCTATAACGCACGATT
TTTTTTATGTTTACAGAGGTGAATCTGGAGTTGACTATTATATAGATTTG
TGATGACACACCAATTTTAGCAGCAGATGCCCGGATTGTCCTGCAGGGGT
TTGCACCAGGCAATCGGCAGTTTTGTGGAAATACAAACTAAACGACGGCT
TTCTGCTTTCCAATCTCGTCATATATTTGCGGGCACTCGTTTACACTATT
GTTGGTGTAATAAACAAACTCCTACCTTAACCTTCAATGCTACCGTAGCA
TTTATCAGAGATTTAGTATATCTGTGGGAAACATTTACAGTGACAAGAGT
ACTCGAAGTAAAATTGTTGATTTTTAGCTAATGATAGATAGACTTATATA
ACTAATAGACTGTATACCTGGAGATTATACAAAAAAACGTGGACCGTAGT
TTGTTTTTTGTGCATGAGGAGTATCTGGGAGCCGTAGACCTGACATCGCA
CGTGGGGACCATACCCACTGGGCTTGCCTCTCACTTCCTTGAGTGATCTT
CCCCTGCTCTTCGTCTACTTTCAGGTGAATAATAACGGGGTGTTGCACTT
TCTGGTTTTGAAGATATTTACATCATGGTCTCGTGTCCTCTTGTCAATCC
TTAAACCAAATCGTATGTACCACTACTAATATAACTGTGCTGTAGTAATC
ATCTGGTTGTTATTATACAAATCTAACACGAGAGTGAAATACAAACACGT
ACTGAACACGTACTGAATACATTTAGATATCATAGTCTAGTATAACAGTC
CCTAGCTCACAACGTATTGTGGAAGAAAAATCTGAATGCACCTAGACCTT
CTGATCCGCTCCCGGCAGGGGGACACTTATTATCGTATACTATTATTACT
ATGGTACTGTATTGTACTGTAGCCTGATATATTATGTACAACAACCTACC
GGTATCTAATTACGTACTACATTATTTTTGGATGCTTTTGGTTGTGGTAT
GTACTATAATACAATGTTTTTGTCAATGTTGGTGTACAGTATAACGGTGG
GCTTCTCCCCGATATTATGCTGTTGGCCCTATGTAACTACATTGGGGAAG
CCTTTTAATACCACGTAGAGGTTTTTGTCCCTACAGCCAATGTTCCCACC
TACCTGGTAAACCTTTTGATTGGCTGATCAGAATAAGGTTTAGATGCGTT
CAGATTTTTTTAAACTCTTCAAGTGTCCTTCACCACAGACACTACTTATT
ATTACTACTTTTACAGAGTAATAACGGCGTGTCGCGGCTTTCTGTTTGAA
GAAAAATCTGAACGCATGTAGACCTTCTGAGCATACTATACCCCAGTCAG
GGGGGAAAAAATGTCAAAACGTTTATAGGTGGGGCCATAGGCTGCAAAGG
CAAAACATCTTCATGGCACTACTACCCATACGAAAGGTAGGCATTGAGTT
AGCGCTACTACAGTACTATAATACTCCACCGATTGGGCTGCTATCGATGC
CGAGCCGCCGGATAAAATTTCTGCACGGGCTCGAGACGGGACTGAATGTT
GCAGAGCGCCTAATCTAGGCATCATCATCATGTGGATGCGTCACGTGGTG
CCCCTCTGACCTGATCATCTGTTACAACATTTTTGTTTAATTCGTTGTAC
GCGCACCTTGTTGCGTTTTTTGTCTTGTTTTCCCCCCCCCTCCGTCGCAG
CCGCGGCACTCTTTCTCTTTGTAGATTTAATACTATACTGGTACTATAGT
AGTGATGGAAGACAAGACAAGGCTAGAGTGGTCTGGGGCGGGGGCGCTAC
CAGATTTCATGTTTTCTCTGGTATTTTTCCTTCTAACTTTTCTTTTTAAT
TTTCCTGTTCAAAAGACCGCATTCGGGACTGGTTACCGTGTTGGTTTTTG
AAGAAAATACAGAGCGCACCTAGACCTTCCGAGCATCCCCCAGTCAGGGG
AAAAAATGTCAAAATGTTCAGGTTTAAAGCAGGTTTTTCGGACCGGCAAC
AAGAACGCTTATTACTGTGAGAAAAAGAACTAGATTGTAGTGTGAATTCT
TAACTCGCACCTGGTACCTGATATTATTAGTGTTTTTTTGTGTTTTGTTT
TTGTTTTGGTGTCTCTACATGGTGATTAATGTCATTGTACAGTAAAACGA
ACGGTGGGTTTCTCCCCGCAATTATACTGTTGACCCTATGTGATTACATT
CTTGGGGAACCGTTTTGATACCATGTATTTGATCTGGTTTGGTTCCGTCT
ATTTTGTGACCACGGCTGGATTCGTAGCGGATCAGTTAATAATGTGAGAT
AAACAACAAACAACAACAACAACAGCCAGGGCCGGTCGCCCCGGTAGCTC
AGAGGTACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCGG
AAAACGGGATTTTTTCTCGCTAAAAACTAAAAACTAAAATAAAAATGCCC
AGCGGGTGGAGAACGATTAATTTCTTAGTACACAAAATTCGACTTCACGG
TCGATGAGGGAAAGGAATGACTGAACCCTTCTCGCGATAAAAATGAAGGC
ACGCACCGCAGGAGGAAGGTGGATGAGAAATCCTGTGTGACCCCGGCTGG
TACGTCCATTGATGTCCAGAATGGATGGGAAGAAAACGCACACAAACACA
CAGCCAATGTTCCACGTGCAATGTTCCCACCTAACTGAACCTTTCACACA
TAGGACAGATCATGATCTAGTTCATCTGTGGCTACAGATCAGCTGTTACC
AAACATGTACAGATGATCTGTGGCTACAGATCAGCTGTTGCCAAACATGT
CAGATGATCTGTGGCTACAGATCAGCTGTTGCCGAACATGTACAGATGAT
CTGTGGCTACAGATCAGCTGCTGCCGAACATGTACAGATGATCTGTGGCT
ACAGATCAGCTGCTGCCAAACATGTACAGATGATCTGTCGCGACAGGTCA
ACCGTGATCTGTCGATGTAACGATCTAGATCGATCTACAGGGATCTGATA
TGTCCTATGTTTGTACTATTAATAGTACACACATAGGACATATCATGATC
TAGTTCATCTGGGGCTACAGATCAGTTGATGCCAAACATGTACAGATGAT
CTGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGATGATCTGTGGCT
ACAGATCAGCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGATCA
GCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGCTGC
CGAACATGTACAGATGATCTGTGGCTACAGATCAGCTGCTGCCAAACATG
TACAGATGATCTGTGGCTACAGATCAGCTGCCGGCAAACATGTACAGATG
ATCTGTCGCGACAGATTCATCGTGATCTGTCCATGTAACGATCTAGATCG
ATCTGCACGGATCTGATCTGGAACCTTTTGATTGCTCAGGAGGTTTAGCT
ACGATCAGATTTTTCTTAACAAACGAAACTCAAGATCCAAGAAGTAATGT
TCAATGTTCCCACCTGAACTTTCACACATACTGGTAGGACATATCATGAT
CTAGTTCATCTGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGATGA
TCTGTGGCCCACAGATCAGCTGCTACCAAACATGTACAGATGATCTGTGG
CTACAGATCAGCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGAT
CAGCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGTT
GCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGTTGCCAAACA
TGGACAGATGATCTGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGA
TGATCTGTCGCGACAGATCAATCGTGATCTGTCGATGTAACGATCTAGAT
CGATCTACAGGGATCTGGTATGTCCTATGTGTGTACTATTAGTAACATGT
CACACATAGGACATATCATGATCTAGTTCATCTGTGGCTACAGGTCAGCT
GCTGCCAAACATGCACAGATGATCTGTGGCTACAGATCAGCTGCTGCCAA
ACATGTACAGATGATCTGTGGCTACAGATCTGCTGTTGCCAAACATGTAC
AGATGATCTGTGGCTACAGATCAGCTGTTGCCAAACATGTACAGATGATC
TGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGATGATCTGTGGCTA
CAGATCAGCTGTTGCCAAACATGTACAGATGATCTGTGGTTACAGATCAG
ATGCTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGCCGGC
AAACGTGTACGGATGATCTGTGGCTACAGATCAGCTGCCGGCAAACGTGC
ACAGATGATCTTTCGATGTAACGATCTAGATCGATCTACAGGCATCTGAT
ATGTCCTATGTGTGTACTGTTAATAACATATCACACATAGGACAGATCAT
GATCTAGTTAATCTGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGA
TGATCTGTGGCCCACAGATCAGCTGCTACCAAACATGTACAGATGATCTG
TGGCTACAGATCAGCTGTTGCCAAACATGTACAGATGATCTGTGGCTACA
GATCGGCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCT
GCTGCCAAACATGTACAGATGATCTGTCGCGACAGATCAATCGTGATCTG
TCGATGTAACGATCTAGATCGATCTACAGGGATCTGGTATGTCCTATGTG
TGTACTATTAGTAACATGTCACACATAGGACATATCATGATCTAGTTCAT
CTGTGGCTACAGGTCAGCTGCTGCCAAACATGCACATATAATCTGTGGCT
ACAGATCAGCTGCTGCCAAACATGTACAGATGATCTGTGGCTACAGATCG
GCTGTTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGTTGC
CAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGCTGCCAAACATG
TACAGATAATCTGTGGCTACAGATCAGCTGCTGCCAAACATGTACAGATG
ATCTGTGGTTACAGATCAGATGCTGCCAAACATGTACAGATGATCTGTGG
CTACAGATCAGCTGCCGGCAAACGTGTACGGATGATCTGTGGCTACAGAT
CAGCTGCCGGCAAACGTGCACAGATGATCTTTCGATGTAACGATCTAGAT
CGATCTACAGGCATCTGATATGTCCTATGTGTGTACTGTTAAATAACATA
TCACACATAGGACAGATCATGATCTAGTTAATCTGTGGCTACAGATCAGC
TGCTGCCAAACATGTACAGATGATCTGTGGCTACAGATCAGCTGTTGCCA
AACATGTACAGATGATATGTGGCTACAGATCAGCTGTTGCCAAAAATGTG
CAGATGATCTGTGGCTACAGGTCAGCTGCTGCCCAACATGTACAGATGAT
CTGTGGCTACAGATCAGCTGCCGGCAAACGTGTACAGATGATCTGTGGCT
ACAGATCAGCTGCCGGCAAAAGTGCACAGATGATCTGTCGCGACAGATCA
ACCGTGATCTGTCGATGTAACGATCTAGATCGATCTACAGGGATCTGATC
TGCCCTATGTGTGAACCTTTTGATTGCTCGGGAGGTTTCACGTTCAGATT
TCCTTAAAGAACGAAACTCAAGATCCAACACACCTTTGATTTCTCGGGAG
CGTTAGCTACGTGGCAAAAGTTATTTCCACCCAGAAGGGTGGAAATAAGG
GTACGCCCAGGCCTTTTGCTATTGTAATCAACAGTGTAATTAATAGCCTC
TACTTCTGGCGTGGGATGTGTTGTGTCTTTTTTTTTTTTTTTACCCCACC
TCCTTGTTGTGTTGTGTCTTGTCTTTTATTTTTTACCTAACCCGAACCCG
AACCCGAACCCAACGCGACACACAGCTGCCGAAAGAGGTGGGGTAAAAAA
AGAAGATAAGACACAACActtttttCTTTTTTTTACCTAACCCTAACCTA
ACCCTAACCCAACGCGACAAACAGCTGCCCAAGGAGGTGGGGTAAAAAAA
AAAGACAAAAGACGAAACACTGTTAATTGCAATATCAAAGGGCCTGGGTG
TACCCTTATTTCCACCCTTCTGGGTGGATTTAATAATTTCGTCGAGCTAC
GTTTAGCTTTTTCTTAAAATTCCGAAACTCAAAATCCAACAGGTAGGTTC
TAAGTGTAGAGCTATTTCCTTTCTTTTTCCACGTCGTCGTCACCTAAACA
ATAATGTACAGTCAGTAGTACCATATTCGAACAAAATGTACATGTGTGCA
TCCACCCGAACAATGCTAGTTACTAGTAGTAAAGAACAGAGCGAAAAAGC
GCCTCGGAACAGAAGATGATCTCACTTTGTGTAGTACAGTAGTGCCGCCC
CGCTGGGAAGGATGTATGCCATAAGAAATTGAGGCTCAAGTTGTTGGGTC
CCACAAGAAATCGGGCCCAAGAAATTGGGGTCGATCGCTGCAGTATACAC
CACATCCGTATGTTTGGATTTCTTATGGCATACACCTCACGCGGTCGCAC
TGGATAAGGTTATGAGCCTCGGCCCAAAATAGTTAGTGCTTCTACCAAAG
TTTGGCAGATACCTGGGCTGTCCTCTCGGGGTCCCTCCAGGTACTTACCA
GTTTTATGGAAATCAAAAGTAGCTCGAGCTATCCTCCCTTGCTATCCTCC
CTTGCTGTTCCACGCGAACCTCTATCAATACATGGGAATCGAGGGGGCTA
GTGCAGCAGGATAACTAGAGGATTCAGCTTAAACCTTTCCATTGTCCATA
ACATGTGTACTTCGTACAGCACACGCTAGGTTATATTTTGGTGCCGTAGC
TGGAGATGAGCAAGGTTCTATTGAGGCCGTGTTTTTAGGGGTCTTTTTCT
TTTCTTTTCTGATGGACCAAAATGTACGTATACTACGTGTGGTCATCATG
TTCACCAGGCTGGGCATCATTCGGTATGGTTACCAATCTTCCTCGTGTCA
GCTAAACAGGATTTGTTTTCGTCTTCCTGTCCCCTGTCGCGCTTGAACAT
TTGGTCTCGCGAGGCAGGTTCGGCCGTCCTGTCCCGCCTTAGCCGGGTCA
TTCTCCATACCCAGGAAGAATCTGGTGCATATTTACCCGCTCCTCTTCTT
CCTCTCGCTTTCCGCGACTATGACAGCATCCATGAATACCGTCGACCGCC
ATCGGGTCAGTCTCGAGTTTATCGGGTCACGCAACTGCGTACCGATGATG
TTCACCGTCGAGAATCCACCGGCACAAGGTCACCAGCCGTCCGAGCAACG
AGCGCTGCTTACTCAGCTAACACCGTGGGCCAATGTTTGTGTGCTTCTCT
TCTCCTACATGCACCAGCAGTTATTGGTACAGTATCAACCGGGTATGGAG
TTGCCAATTTTGCCCGTGGTCAGCTGAACAGGGAAAATATTTTTTCCCTG
TTGAGGGTAGGTTCGGCCGTCCCGTCCCACGCCAGCCCGCTCATTCTCGA
CACTCAGGTTGGATCTGGTGCTTCCCCACGGTATTCGTCCCACTTTCCGT
GTCGGCGTCCATTTATTTAGTTATACCGCCAATCGCCATCGGGCGAGTCC
TTAGTGTATCAGGTCACGCGGTTGCCTTCCGATGGCGCTTCACCGCCGAG
AGCCCGCCCCGACGCAGAGCCAGTAGTCCTCAAGGTAGTTCCAGTAACGG
GTGCTGCCTATTGAGGTAACGCCGTCGACCAATCGATGTATGCCCCTCTT
GTCCTGCACCCACTATTTTCCTATTTATAGTGGGCATGTCATGTCCGATG
TGTCCCAATACTATCGGAGGCATCTTGGGAGGGTAGGGGCTTGGTTGGCT
TCCATCCCGCTCGGTGGACGTGAAATACAGGCATTGCCTAGCGAGAACAA
AATCAAGGATGCATGCGCTACGAAATCCCGCGAGATATCGTCTGCTCTGC
TGCACGGCTTGAGGCTGCAGCGTGCACCTCTTGGTATTGTAGTAAAATAA
TTCAGTCAAGGGCCGCTGCTTCACAAAACCAATTTCAACTTCAGGTCTCG
TCCGCGCAAAAACGGTTTTCGCCGTCCTGACAATCGTGCTCCTGGTTGGT
AGTTTTCTTTTCGGCGATTCAATACAACAATTACCACAAGACCATATAAG
ATGGCCAATTGGTACGCCATCGTGTTCGTGTATTTGCAGCGCACGGGAAT
GCATGGTCATCTAGCACAGTCTGGATCGACCGGGTAAGGTTGCCAATCCT
GCTCGTGTAGGTCGCCGTTTTTTTTGTTTTTTTTTTGTGAGTTATTTTTA
TACCAGTATATTTTTCGTGTAAGTCAGTAAGTCTAAAAGCTTAGCCTTCC
AGGGAGGCGACATTTTTGACGGGTTGACATCGTATATCGTTTAGTCTGTA
CCGTGTGTGTATGTATAGTCACATGTATATCAAGAGTGTGGATTAACCGG
GTGAGGTTGCCAATTCTGCTCGGGGTCAGCTGAAAAGGAAAATGAATATT
TCTCTGTCCCTGTTCGCGCCTGAGAATTTGGTCTCGCGAGATGGGTTCGG
CAGTCCCATCTCGCGTCAACCTGCTCATCTCCATACCCAGACTGAATCTG
GTGCTTACTTACGGGATTCCAGCCGAGTTCCGCGGCGGCGTCCATGTATT
TATTCAAAACCGCCACACGCCATCGGGTCAGTCCCTAGCTTATGGGGTCA
CGCAGTTGTGTACCGGATGGCGTTCACTGCCGAGAGTTCGCCGGCACAGG
GCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCAC
CATGGACCAATTACCGTAATATCCTCTGAGTTCGCCCCGCGGGGGGATGT
ATATTTATTGCGGAAAATATATTACCGCGGGGATAACTCAAAGGTAGGGG
GGGATCTTACAAAAATAAATAAAACACCCCGGGGGGAAGAGTCCCCGAGG
GGATCTTCCGAAAAGCACAACACACACACACCTTACACACATAAACGAGC
AATGACGTCTTGGATTCTAGTTTGGTCGCACTGATTTGGAGGAAGTTCTG
TCTACCTTTATTCGCCCCGCGGGTGCGTGTGTGTGTGTTTTTTGCGGAAA
AAGATCACCCCGGGGGTAACTCAAAGGTAGGGGGGGGAATCTAAAAAAAA
CACCCCGAGGGGAAAAGTCCCCGAGGGGATCTTCCGAAAGCACAACACAC
ACACACCTCACGCACACTAAACGAGCAATGACGTCTTGAATTCTGGTTCG
GTCGCACGGATTTCGAGGAACTTCTTTCACCTTTGCATTTCACACGATTG
ATTGCACTTACGAGGGAGCGCCCCTCCTCCACCCGCAAACGCTCGGACTT
TTCCGATATTTGTTCAATTTCTGTGCAACACCATAACAACAACCAACATA
ACAACAGCAAACGATTGACAATTGACGGAAATAATACTGCCGATTTTTCT
GTGTTCCCCCCGGGGGCGGGCATTTTTTTTTTGCGAAACAAAATCCCCCC
GGGATAGCTCAACGTTTTCATGCCCACTTCGGCCAATTACTTTTGGGGGG
AGAACTCAGGGGGAGGGGGGGGGGGGCAAAACAGAGGATAATACGGTAAT
ATGCATTGCGCCTTCCTTTCCCACACCCACTATTGGCATGCAAGTACCAG
TACACATGTTTTCCTCAACCAGGATTTTTTTTTGTCTCTCTTCGTTTACG
AGATACATTACATTACATTACATTACTGTACTTGCTTCTTGTTTTTTTTC
CCTTTTACAGTACCCCCTCACCTCATTATTTATTTCATGTTCGGCAAACT
ACAAGCGAGGAAGAAGATACCTAGCCCGGCCCTTGGACGAAAAAGAACCG
TGGTAGATATTAGTGCTTAAGAGACCAGACGCTGTTTGTTAATTTTTGTT
GTTGTATCGTATAGAGGGTACAAGGAGTGTTGCAAGCGTCATGCATCACC
GTGCGCGGAGTTTCCTATATATATATATATATATATAGCTTAGGGACACC
GGCATCGTTATCGATGGAACTCCTTTTTAAATTTCCCGCTTTTCGATTGG
GCGCGGAGTGCATTGGAATAAGTGTTTTGTGTTCTCAACGCGGAAGAGGA
AGCGAATCAAAGAGCAAGGGAGAAGAGAGTAACGGCGAAAATTTGCCTCG
GCCGCTTTTTTTCGAGAGGTCCAAGTGTTAATTTTCACTTGACCGGGACG
GTAAGGGCGGCGGAGCTTGTGACCCACGTGTTAACGAAACCTTCTCTACT
TCATACCTCCGGTGGAAGCACCACGAACACAAGCAAGAAAACTCGGAGTC
CCGTTCGACGTCCGTATGTTGTTCGTGTTGCTGCGTGTCAAGTCAGTATT
CTAGCTGTAAAAAAAAAACACAAAACGAGTGTTCACCCGCTACCACCACT
GTAACAATGCCATGTTTTACCTATTTCATGATGTCGCCCCCTAACTCCGT
ACCCTATTCACCGCCGGTCGTATGCTTTTCTTGTCGGGGTGGGTCGGCGT
GCCTTCTTGTCCTTCTCCCCCCCCCCGGTTGCGTCTTCTTATCAGACCAG
ATCGACAAAAATCGTCGTGTTTCGCTCCATGCGACTGAGTGAGATCCTGA
GTCCTTCCTTCTGGAGCCAAATCTGGATCGACTACTCCCGCTTCGATCCG
TCCTACGCGGACTCTCGATCGGCCGGCTACAACGTCGACATCTGCAACGG
CCACTCTACGCTGCCGCCCACGTTGTTCTTGATGGTGTCGATGGTCTGGC
CGATTTTCGGGGCGAAGGTCAGACTGGTGCTGCGCTGCGTTTCTCGAGTT
CGTTCCGCCAGCCGCGACGTTTTTGAAAGCGGTAGCCTAATTGTTGGTTA
AGCATTTCGTCGATGCGTTAAAGAGCCTTGGAGCCCCCCCCCCCAGTTCT
GTGCTGGCGGGACGCAGTTGACCCATTTTCCGAAAGACGGGAGCCCCTTG
CGTTAGCAGAGCGGAGTGCATCAGGTACCAGCTAGGTACGGTTTTGCGCG
AGAAACGTTAGGCGTGGGGCGCTTAAGAGACACTGTTCACGCGGCTCGGC
CTCGTTCGCCCGTGGCGTGCGCTTCCCGCGCGCAGGTCACAGGGATGGTG
GCGCTGGTGATGCACTACCAGATGCTGTACGGTTCGCTCATGTACTTCGT
CTCTTTCTTCAACAACAGAAGGTCATGTGGCATTTTTGGGAAGGAAAGCA
GGATCGCATCGTACGAGCGTTGCCGTCTGGGACTGCGGGTTTTTCGTATC
ACGTCCACTCCGTCTACTACGGGCAACCGCAGAGTTGCCCGAGAGAAATC
AAGTTGCCGTGAAGCCCTCTGAGAATCCTCCCCTTCCCCCTCCCCATTTC
CCCCTCTTTTCCTATTTGAACATGTAGGCAGACGAAACAAAACATTTTTC
TGGCGAGTCCTGTAGACGAAGCCTTTTCACCGTCGCCCTTAAGTTTTTCT
CTTGTTAGGGAGGAAAAGTGTGAAGGGCATATTTCTTCGCTCCACCTGTG
GGGAGAGATTTATCGTTCGAAGGGGTTGTGCGGTACCTGCCCAAAGTTTC
TTTCGGTGTTTTGCTCCTTCGAGAATCGTGGTCGAAGAAATTACTTGCTT
TCACGCATCGTTCTTAGAGCTATATACCAGGCACTGTACCTGTATATAAA
ATATTGATGTCTATACCGTTAGCTATGATATCTATAGATTCACCCTGGAA
TGTATATGACTATACTTCGTGGGTTGTCTCACACGTGCTTTGGCCGCCCT
TATCCCCTTTTCCCTCATATCTCCCTTTGCCTGTTCCGTAACCACAGCCA
TAAGGCCATCAGCCAAGCCGAAGTTATCGCGGCGGTGTTGTGTCCCACTC
TCGTGTGGGTGGTGTTCCCTCTGGTGGGCATGTACCAAGGCTACAGGGTG
AGCAGGCCGACGACCGAAAAACCGCTCATCGAGACGCGCGGAGCTATCTT
CGCACCCCGTGCGTTTTTTCCAACCGTCACGATCGCGACGTACTTTTATC
ACTGCACGAAACGGCCAGAGTCAAGTACATGTTACGCCAGGTCAGGCGTT
TCTTAAGGAAATCAATCTACGCCGCGAATGTTCGCGCTCATAGCCTCTTA
ACGAGTACATATGCCACACATGTAAACCACTACGAAACAAGGAATAGTAT
ATAGAGGGGATGCCTTGGACATAGCGTCACGTTTGAGTTTACATTACTTT
CTGTGCTGCTTACGCGTGTTTTTGTGACCATTCCTTGCGCTGTAAGCTGA
TCATGGAGGACAGCTTTTCGGCGTGGCAGTAGCCTCACAGATCGAAGGGA
TGATTCGCCTGTGTTGAGAGGTGAGCGTGACCAGCCGACACGTTGATGCT
TGGAAAGCATATGCTGTACCTCTGGGACCAACCATCCAGTCCAGCACGAG
AGCGTATTCCTACCGAGTGGAACATCCGAACAGTGGAGGTGGTAGTGACC
GTTGGGGAATTCCCCGCTATCTTCTCCAAGGATGAAAATGCTAGAGAGTG
GCGCGCGTTAAAATATATGCCATGTCTCTTGGGCAAGAGGCAATACGCCC
CGGGAATCGAAATGCCCCCTCTCTTGTAGGTTCTAGTCTAGGGCGGTACT
TTAAGCAGCATAAAATGCAATTTTGCTACGATCTCGTCAACGTCTTCCTA
TAAAAAACCGTCTTGAAAGGCCTTTTTTGTCCCCTCTTTTGCGGGTTAAG
TCGACAAAGGAACCAGTCCCAGGGGACAGGAGATGTTTACCTTGTCACCT
ACGGAGTGAAATGTTCGTCTCAACCCATTCGTGTCAAACCTCTTTCGTTG
AAGGTATACTTTGTCGGTTCCCGGGGGATAAAGGGTGGATGTTACAAGGG
GAACGTAAAATAGGTTTATGTATCACGATGAGTGACTCCTCGAAAAGAAT
GTTGGCCTCGTTCTTTAGTTTGTTGTTGTTTTTCACGTTCCACCGACTGC
ACGACTTATCAATCCCGTTTGTGGATCGATTAAGACGGGAAAAATCGAGC
AAAAGGAAATCAGCAAAGGACAGATTCCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1241:111409..129187+

>mRNA_F-serratus_M_contig1241.1851.1 ID=mRNA_F-serratus_M_contig1241.1851.1|Name=mRNA_F-serratus_M_contig1241.1851.1|organism=Fucus serratus male|type=CDS|length=1362bp|location=Sequence derived from alignment at F-serratus_M_contig1241:111409..129187+ (Fucus serratus male)
ATGAAAGGAAGCATGGCGACCGTGCCCGTAGCGACTGTGATATGTATGGC
CGTTGGAGCTCCTTATCTCTGGCTCGGCTGCCAGCACTACTTGACGCACG
GTCGCTTGAGCGGCGGGGCGCAATCTGTTCTTCTGTTCCTCTCCATCAAC
CTATTGATTTGCCTGTGGGAGCTGTGTCTGTGCTACAAGTACCGCTTGAT
CCGCTCGACACACACCCAGAGGGTCAAGGCCGGCGAGATGAAAGGAAGCA
TGGCGACCGTGCCCGTAGCGACTGTGATATGTATGGCCGTTGGAGCTCCT
TATCTCTGGCTCGGCTGCCAGCACTACTTGACGCACGGTCGCTTGAGCGG
CGGGGCGCAATCTGTTCTTCTGTTCCTCTCCATCAACCTATTGATTTGCC
TGTGGGAGCTGTGTCTGTGCTACAAGTACCGCTTGATCCGCTCGACACAC
ACCCAGAGGGTCAAGGCCGGCGAGACCAGATCGACAAAAATCGTCGTGTT
TCGCTCCATGCGACTGAGTGAGATCCTGAGTCCTTCCTTCTGGAGCCAAA
TCTGGATCGACTACTCCCGCTTCGATCCGTCCTACGCGGACTCTCGATCG
GCCGGCTACAACGTCGACATCTGCAACGGCCACTCTACGCTGCCGCCCAC
GTTGTTCTTGATGGTGTCGATGGTCTGGCCGATTTTCGGGGCGAAGACCA
GATCGACAAAAATCGTCGTGTTTCGCTCCATGCGACTGAGTGAGATCCTG
AGTCCTTCCTTCTGGAGCCAAATCTGGATCGACTACTCCCGCTTCGATCC
GTCCTACGCGGACTCTCGATCGGCCGGCTACAACGTCGACATCTGCAACG
GCCACTCTACGCTGCCGCCCACGTTGTTCTTGATGGTGTCGATGGTCTGG
CCGATTTTCGGGGCGAAGGTCACAGGGATGGTGGCGCTGGTGATGCACTA
CCAGATGCTGTACGGTTCGCTCATGTACTTCGTCTCTTTCTTCAACAACA
GAAGGTCACAGGGATGGTGGCGCTGGTGATGCACTACCAGATGCTGTACG
GTTCGCTCATGTACTTCGTCTCTTTCTTCAACAACAGAAGCCATAAGGCC
ATCAGCCAAGCCGAAGTTATCGCGGCGGTGTTGTGTCCCACTCTCGTGTG
GGTGGTGTTCCCTCTGGTGGGCATGTACCAAGGCTACAGGCCATAAGGCC
ATCAGCCAAGCCGAAGTTATCGCGGCGGTGTTGTGTCCCACTCTCGTGTG
GGTGGTGTTCCCTCTGGTGGGCATGTACCAAGGCTACAGGCTGATCATGG
AGGACAGCTTTTCGGCGTGGCAGTAGCTGATCATGGAGGACAGCTTTTCG
GCGTGGCAGTAG
back to top