mRNA_F-serratus_M_contig1240.1846.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1240.1846.1
Unique NamemRNA_F-serratus_M_contig1240.1846.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.150e-79
Identity = 142/287 (49.48%), Postives = 183/287 (63.76%), Query Frame = 3 
Query:   15 DSAIVVAICLAIPLGFSYSGSGKVGLTTKRGLTNSTKCTAHSIHWRRRLQHASCGLVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHELRG-LPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSN-GSNKLL---VFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTL 860
             S   V +C+ +P+ F Y                 T  TA S+HWRRRLQHA+CG+ +  GYKWV+RDA TVVA+L   C  F   H LR R+++++++YI   GPLLRP E+RG LPG FWF++G+ AAVA+F +D+ALQSI+HLS+GDPVAS+ G+  G+ NR+LP GKSLAGSLAAF AC+ STLLLFG C         P   G +  + G + LL   +F + +AC       R         LL+ + LGG+SGA GELLPL +DDNLSMPIVSG  FL L
Sbjct:    8 SSVAAVLVCVGLPVLFGYHNRQV-----------ETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIACASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGQLPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCC------CRPPGDEGRDSDHVGDSDLLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLAL 277
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A485LBM6_9STRA (Aste57867_18956 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBM6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.960e-34
Identity = 98/303 (32.34%), Postives = 144/303 (47.52%), Query Frame = 3 
Query:   21 AIVVAICLAIPLGFSYSGSGK-----VGLTTKRGL--------TNSTKCTAHSIHWRRRLQHASCGLVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHEL-RGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTL----LLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWLI 875
            A++V +    PLG  +  +       V  T   GL        + ST  T   +H RR++QHA  GL++ +G  +    +  VV VL      F+    LR + + +N  Y+  FGP+LR HE+   LPGAFWFLLG+A ++A F +D+A  SI+HLS+GDP AS  G++LG  +  L  GK++AG +  F  C  +++    L+ G    G TLA   L +                                           L GL+G  GE L L +DDNLS+P+VSGA    ++  L+
Sbjct:   13 AVIVGLVFLTPLGALFGDTSSAVAAVVFTTCVLGLQFLVVQHSSTSTVRTTQQLHIRRKVQHAGSGLLVVAGTFYA--SSVQVVIVLGCSAVAFYIITYLRKQYKVVNTTYLHVFGPILRQHEIAHRLPGAFWFLLGSALSLAFFSKDVAQLSILHLSLGDPCASFFGITLGHHSHKLANGKTIAGVVGCFVVCLLTSIAFLALVDGPVAHGTTLATKGLVM------------------------------------------VLAGLAGTLGEALSLGVDDNLSLPLVSGAAMSLIWHVLL 271
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A1W0ABA5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.880e-31
Identity = 91/268 (33.96%), Postives = 140/268 (52.24%), Query Frame = 3 
Query:   90 LTTKRGLTNSTKCTAHSIHWRRRLQHASCG--LVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHEL-RGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWLIPSL 884
            L  KR    + + T   +H RR++QHA  G  +VIA+ Y   +        VL  C   F+G  V R + +A++ VY++ FGP+LR HE+   LPGAF+FL G+A +   +P+ IA  S++HLS+GDP AS  G++LG     L  GK+LAG +  FF C  S++    +                         +V  +I           HL    +  ++ TS   G++GA GE+L +  DDNLSMPI+SG +F+T++ + + +L
Sbjct:   48 LVVKRSSYTNVR-TTQELHVRRKIQHAGTGVLIVIATFYGSSIE----ATVVLAICALIFYGVSVARRQFKAVDTVYLQIFGPILRQHEVGHRLPGAFFFLTGSALSFVFYPKFIAQLSVLHLSLGDPCASFFGITLGHTTSKLWNGKTLAGVIGCFFVCLLSSIAFLSF-------------------------VVHHDI----------AHLSWLKQVLIMGTS---GIAGAIGEVLNVGCDDNLSMPIISG-LFITIFYYGVQAL 271
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A6G0XP90_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP90_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.220e-31
Identity = 94/291 (32.30%), Postives = 140/291 (48.11%), Query Frame = 3 
Query:   21 AIVVAICLAIPLGFSYSGSGKVG-------------LTTKRGLTNSTKCTAHSIHWRRRLQHASCGL--VIASGYKWVLRDAWTVVAVLCFCCTG-FFGFHVLRCRMQALNEVYIRTFGPLLRPHELR-GLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSG 842
            A++V +    PLG  +SGS  V              L  +   T++ + T   +H RR++QHA  GL  V+AS Y   ++     VAV+  C    F+    LR + + +N+ Y+  FGP+LR HE+   LPGAFWFLLG A ++ +FP+++A  SI+HLS+GDP AS  G++LG  +  +P GK+LAG +  F  C                                    +  NI   ++      HL    +  ++ +      +G  GE L L  DDNLS+PIVSG
Sbjct:   47 AVIVGVIFLSPLGSMFSGSSAVACVLFTFLILLLQFLVVRHSSTSAVR-TTKQLHIRRKVQHAGSGLLVVLASFYGSSVQ-----VAVVLICSAAVFYVVTQLRKQSKVVNQTYLHVFGPILRQHEIAYRLPGAFWFLLGCAGSMLLFPKEVAQLSILHLSLGDPCASFFGITLGQNSPKMPNGKTLAGVIGCFVVC------------------------------------LLCNIGFLSIVDTSIAHLGLLEKALVVVSC---AFAGTLGEALYLGCDDNLSLPIVSG 292
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A024US71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US71_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.060e-30
Identity = 86/297 (28.96%), Postives = 141/297 (47.47%), Query Frame = 3 
Query:   21 AIVVAICLAIPLGFSYSGSGKVGLTT------------KRGLTNSTKCTAHSIHWRRRLQHASCGLVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHEL-RGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWL 872
            A+++ +    PLG  +SG+  V                    T+ T  T   +H RR++QHA  G+++  G       +  V  VL      F+    LR + + +N  Y+R FGP+LR HE+   LPGAFWFLLG   ++ +FP+D+A  S++HLS+GDP AS+ G++ G     L  GK++AG +   F C  +++              + +   ++  +G  ++ V +              LC              G +G  GE+L +  DDNLS+P+VSG V   ++R++
Sbjct:   17 AVIIGLVFLTPLGSLFSGTSSVVAVVFIVATXXXXXXXXXXXTHHTVRTTQELHIRRKIQHAGSGVLVVVGS--FFASSLQVSIVLACSAAAFYIVAQLRQQYKVVNSTYLRVFGPILRQHEIAHRLPGAFWFLLGCCGSLLLFPKDVAQLSVLHLSLGDPCASLFGLTWGHHTSKLSNGKTIAGVVGCMFVCFVTSVGFL-----------SVVDTSIQHLSGIQRVGVMA--------------LC--------------GAAGTLGEVLYVGCDDNLSLPLVSGGVMSMVWRFI 272
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A067D3P6_SAPPC (Phosphatidate cytidylyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D3P6_SAPPC)

HSP 1 Score: 125 bits (315), Expect = 1.090e-28
Identity = 86/269 (31.97%), Postives = 135/269 (50.19%), Query Frame = 3 
Query:   90 LTTKRGLTNSTKCTAHSIHWRRRLQHASCG--LVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHEL-RGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFL-LFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWLIPSL 884
            L  KR   ++ + T   +H RR++QHA  G  +V+A+ Y   L  A     +L  C   F+    +R + +A++ +Y++ FGP+LR HE+   LPGAF+FL+G+A +  ++P+ IA  +++HLS+GDP AS  G++LG  +  L  GK+LAG +  F  C  S++         A                                        TD   F  L    + G++GA GE+L +  DDNLSMP+ SG +F+TL+   I +L
Sbjct:   48 LVVKRSNYSNVR-TTQELHVRRKVQHAGTGVLIVVATFYGSALEAA----VILAICALTFYCVSFMRKQSKAVDAIYLQIFGPILRQHEVGHRLPGAFYFLMGSALSFVLYPKFIAQLAVLHLSLGDPCASFFGITLGQHSTKLWNGKTLAGVIGCFLVCLLSSVAFLTTATHDAI---------------------------------------TDLSTFQQLLLMGMAGIAGAIGEVLNVGCDDNLSMPLFSG-LFMTLFYHAILAL 271
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A1V9Z468_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z468_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.470e-27
Identity = 87/268 (32.46%), Postives = 143/268 (53.36%), Query Frame = 3 
Query:   90 LTTKRGLTNSTKCTAHSIHWRRRLQHASCG--LVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHELRG-LPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWLIPSL 884
            L  KR   ++ + T   +H RR++QHA  G  +V+A+ Y   L  +     VL  C   F+    +R + +A++ +Y++ FGP+LR HE+   LPGAF+FL G+A +  ++P+ IA  S++HLS+GDP AS  G++LG  +  L  GK++AG +  F  C  S+++         TLA +            + +  FS I                  + +LF +  G ++GA GE++ +  DDNLSMP++SG +F T++   I +L
Sbjct:   50 LVVKRSNYSNVR-TTQELHLRRKVQHAGTGALIVVATFYGTSLEAS----VVLAICALTFYFVSFMRKQSKAVDAIYLQIFGPILRQHEVHHRLPGAFYFLTGSALSFVVYPKFIAQLSVLHLSLGDPCASFFGITLGQHSTRLWNGKTVAGVIGCFLVCLLSSVVF-------VTLAAH------------DAVKSFSVI------------------KQMLFMAATG-VAGAIGEVVNVGCDDNLSMPLLSG-LFSTIFYHAILAL 273
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A7S3PZ99_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ99_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.500e-26
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 3 
Query:  138 SIHWRRRLQHASCGLVIASGYKWVLRDAWTVVAVLCFCCTG-FFGFHVLRCRMQALNEVYIRTFGPLLRPHE--LRGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLP-----AGKSLAGSLAAFFAC 560
            S+H+RRR+QH   GL+    Y       + V ++L   CTG F+  H  R +  A+  VY++ FGPLLR HE  +  LPGAFWFL GT   V IFP DIA  SI+ LS GDP+A+I G+++G    V+      +GK+L+GS A F  C
Sbjct:   63 SLHYRRRIQHVLTGLIF---YTLSFYLPFVVASLLLIICTGAFYALHFFRSKSNAIQNVYMKFFGPLLRDHEKCVFTLPGAFWFLFGTMVTVIIFPMDIARTSILCLSFGDPIAAIIGINVGGPGIVISTKRKSSGKTLSGSFACFCIC 208
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A7S1C3A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3A2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.920e-25
Identity = 67/191 (35.08%), Postives = 95/191 (49.74%), Query Frame = 3 
Query:  273 HVLRCRMQALNEVYIRTFGPLLRPHELRGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGA 845
            H  R R +++N +Y+  FGP+LR HE   LPGAFWF+LG AAA+ ++P  IA  + +HL  GDP AS+ GV  G +   +  GKS+AG +AA   C   T    GW                                   L  GDD         F + + F+G ++GA  E + L +DDNLS+P+++GA
Sbjct:    2 HAARLRHESVNRLYMAAFGPILRSHEADALPGAFWFILGCAAALLLYPAPIASLAFLHLGFGDPAASLFGVLYGHRCGRVSDGKSVAGLVAAVAVCTVVTAAYGGWA----------------------------------LSWGDD----LGPIGFFVISCFIG-IAGAVAESIELGVDDNLSIPVLAGA 153
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BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Match: A0A1F3XWE5_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrionales bacterium RIFOXYD1_FULL_44_7 TaxID=1797402 RepID=A0A1F3XWE5_9PROT)

HSP 1 Score: 113 bits (282), Expect = 1.050e-24
Identity = 73/236 (30.93%), Postives = 115/236 (48.73%), Query Frame = 3 
Query:  141 IHWRRRLQHASCGLVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEVYIRTFGPLLRPHELRGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGDPVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATLAENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSFLGGLSGATGELLPLRMDDNLSMPIVSGAV 848
            +H  R+L H S GL++ + Y   +  A  VV +        F   + R  +   NE  +R +GP++R +E     G  ++L   A AV IFP+ IA+ +I +L+ GDP+AS+AG+  G K +    GKSL G++A    C+                                 +L F  I++ +LG            +++L  +F+GG++G + ELLPL +DDN S+PIVSG V
Sbjct:   27 LHLARKLWHMSMGLLLIAVYMSGMSRATAVVTLSSILGLDLF-LEMARLHLPVFNEKVMRFWGPIMRNYERDRFSGVPYYLAAAALAVGIFPKTIAVLAIAYLACGDPIASLAGILFGHKGKKFKNGKSLVGTVAGVLVCS---------------------------------ILTFIFISSSHLG-----------DQYVLALTFIGGVAGGSAELLPLEVDDNFSIPIVSGFV 217
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1240.1846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8G9_ECTSI1.150e-7949.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485LBM6_9STRA3.960e-3432.34Aste57867_18956 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0ABA5_9STRA2.880e-3133.96Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6G0XP90_9STRA3.220e-3132.30Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024US71_9STRA1.060e-3028.96Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A067D3P6_SAPPC1.090e-2831.97Phosphatidate cytidylyltransferase n=2 Tax=Saprole... [more]
A0A1V9Z468_9STRA3.470e-2732.46Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S3PZ99_9STRA6.500e-2644.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1C3A2_9STRA1.920e-2535.08Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1F3XWE5_9PROT1.050e-2430.93Uncharacterized protein n=1 Tax=Bdellovibrionales ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1240contigF-serratus_M_contig1240:167697..174020 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score264.6
Seed ortholog evalue5.8e-68
Seed eggNOG ortholog2880.D7G8G9
Preferred nameDGK1
KEGG rclassRC00002,RC00017
KEGG koko:K16368
KEGG ReactionR09944
KEGG Pathwayko00564,ko01100,ko01110,map00564,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0098827,GO:1901576
EggNOG free text desc.dolichyl monophosphate biosynthetic process
EggNOG OGsCOG0170@1,KOG4453@2759
EC2.7.1.174
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons5
Model size1964
Cds size933
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929168.4040167-UTR-F-serratus_M_contig1240:167696..1681891622929168.4040167-UTR-F-serratus_M_contig1240:167696..168189Fucus serratus maleUTRF-serratus_M_contig1240 167697..168189 -
1690962733.3142338-UTR-F-serratus_M_contig1240:167696..1681891690962733.3142338-UTR-F-serratus_M_contig1240:167696..168189Fucus serratus maleUTRF-serratus_M_contig1240 167697..168189 -
1622929168.4175847-UTR-F-serratus_M_contig1240:168204..1687311622929168.4175847-UTR-F-serratus_M_contig1240:168204..168731Fucus serratus maleUTRF-serratus_M_contig1240 168205..168731 -
1690962733.3269403-UTR-F-serratus_M_contig1240:168204..1687311690962733.3269403-UTR-F-serratus_M_contig1240:168204..168731Fucus serratus maleUTRF-serratus_M_contig1240 168205..168731 -
1622929168.4819512-UTR-F-serratus_M_contig1240:174009..1740201622929168.4819512-UTR-F-serratus_M_contig1240:174009..174020Fucus serratus maleUTRF-serratus_M_contig1240 174010..174020 -
1690962733.3899903-UTR-F-serratus_M_contig1240:174009..1740201690962733.3899903-UTR-F-serratus_M_contig1240:174009..174020Fucus serratus maleUTRF-serratus_M_contig1240 174010..174020 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929168.4308805-CDS-F-serratus_M_contig1240:168731..1691421622929168.4308805-CDS-F-serratus_M_contig1240:168731..169142Fucus serratus maleCDSF-serratus_M_contig1240 168732..169142 -
1690962733.3403971-CDS-F-serratus_M_contig1240:168731..1691421690962733.3403971-CDS-F-serratus_M_contig1240:168731..169142Fucus serratus maleCDSF-serratus_M_contig1240 168732..169142 -
1622929168.4438913-CDS-F-serratus_M_contig1240:172451..1725481622929168.4438913-CDS-F-serratus_M_contig1240:172451..172548Fucus serratus maleCDSF-serratus_M_contig1240 172452..172548 -
1690962733.3543305-CDS-F-serratus_M_contig1240:172451..1725481690962733.3543305-CDS-F-serratus_M_contig1240:172451..172548Fucus serratus maleCDSF-serratus_M_contig1240 172452..172548 -
1622929168.460852-CDS-F-serratus_M_contig1240:172827..1730351622929168.460852-CDS-F-serratus_M_contig1240:172827..173035Fucus serratus maleCDSF-serratus_M_contig1240 172828..173035 -
1690962733.3671396-CDS-F-serratus_M_contig1240:172827..1730351690962733.3671396-CDS-F-serratus_M_contig1240:172827..173035Fucus serratus maleCDSF-serratus_M_contig1240 172828..173035 -
1622929168.471736-CDS-F-serratus_M_contig1240:173792..1740091622929168.471736-CDS-F-serratus_M_contig1240:173792..174009Fucus serratus maleCDSF-serratus_M_contig1240 173793..174009 -
1690962733.3770015-CDS-F-serratus_M_contig1240:173792..1740091690962733.3770015-CDS-F-serratus_M_contig1240:173792..174009Fucus serratus maleCDSF-serratus_M_contig1240 173793..174009 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1240.1846.1prot_F-serratus_M_contig1240.1846.1Fucus serratus malepolypeptideF-serratus_M_contig1240 168732..174009 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1240.1846.1

>prot_F-serratus_M_contig1240.1846.1 ID=prot_F-serratus_M_contig1240.1846.1|Name=mRNA_F-serratus_M_contig1240.1846.1|organism=Fucus serratus male|type=polypeptide|length=311bp
MDSAIVVAICLAIPLGFSYSGSGKVGLTTKRGLTNSTKCTAHSIHWRRRL
QHASCGLVIASGYKWVLRDAWTVVAVLCFCCTGFFGFHVLRCRMQALNEV
YIRTFGPLLRPHELRGLPGAFWFLLGTAAAVAIFPRDIALQSIVHLSVGD
PVASIAGVSLGDKNRVLPAGKSLAGSLAAFFACATSTLLLFGWCREGATL
AENPLSLGLEGSNGSNKLLVFSNINACNLGCGDDRHLCTDSRRFLLFTSF
LGGLSGATGELLPLRMDDNLSMPIVSGAVFLTLYRWLIPSLFCNQAGFEQ
LEEARFSPVQ*
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mRNA from alignment at F-serratus_M_contig1240:167697..174020-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1240.1846.1 ID=mRNA_F-serratus_M_contig1240.1846.1|Name=mRNA_F-serratus_M_contig1240.1846.1|organism=Fucus serratus male|type=mRNA|length=6324bp|location=Sequence derived from alignment at F-serratus_M_contig1240:167697..174020- (Fucus serratus male)
CGTGACGAAGCATGGATAGCGCGATCGTTGTTGCGATATGCTTGGCGATT
CCGCTCGGTTTCTCCTATAGTGGTAGCGGGAAGGTGGGGCTAACGACGAA
GCGGGGACTTACGAACAGTACTAAGTGTACGGCTCACAGTATTCACTGGA
GAAGAAGGCTTCAGCACGCTTCTTGCGGCCTAGTCATTGCCTCGGGATAC
AAGTGGGTCCTAAGAGACGCGTGGACAGGTTAGTACTATTTTTTCTTCCT
CGTGGAATCACCGATCGTACAGTGGACTCTTCACGTTGTTAGGTAGGTAG
TGGAGGTTTCGACTCTCGAGGTAGTGAGGTGCAGTAAATAGAGGGTTTTC
CGGCGCCTCCCCGCGGCGAGGCTTATACACATAAAACATACCAATTCCGT
ATAACTGATTGTACACCCAAACGTTTTGCCGTTTTTCCCCCGTCCGAGGG
ATGCTCAGAAGGTTTAGATGCGTTCAGACTTTTCTTCGGACAATCTTGAC
ATATCTCAACCCCTCTACTCGTGCAATAAGTCACCCCCGCCAAGCACGTC
CAGAGAGTGCATTCTTTAATCATCCGAAGTAGGTAACAACCGAACGTCTC
ATCAAGATTGGAATACGACACCTCGATTACAGCGCAAGCATTGCTCTGAA
CGCTTCGCTTGTTCTATCCCAGGTCGAGGGGAGCACGCAGCACATTTACA
CCTTGTACGGGATTCCTGCCGTACAACCAGTATCATAAAGTAGTACTCTA
CAGGAGTAATCTCTACTCGTATACAGCTGTAGATAGCGGTCGTTCCCTGA
GAGGGGGGGGGGGGCACCCTTGCGCTACTCTCCATGGCTCGACCATTGAC
CTGAAAATGTGATAACGGATGGAATCGAACACGTGCGCGTGGAATAAGTG
CGACATAACCAGAGGTATTCTATAAAGGTAGTAACTTATTATATTAGCCG
ATACTATAATGTCTGTTACTGTCACTGTACAACAGTTGTGGCAGTCCTTT
GCTTCTGCTGCACGGGCTTCTTCGGGTTTCACGTGCTGAGGTGCCGGATG
CAAGCCTTGAACGAGGTCTATATCAGGACATTCGGACCGTTGCTTCGACC
GCACGAGTTGCGTGGACTGCCGGGGGCGTTCTGGTTCTTGCTTGGCACGG
CCGCCGCCGTTGCCATCTTTCCTCGAGACATTGCTTTGCAGAGGTATGGA
CGGACCCAGAGCTCTGATAGGTACTCTAATAGGTACTCAAGGTCTCTATT
TTTGACGAGGGCTATTGATAGCTTTCACATTATGACCCCACGAAGCTATT
AAAAGAGAGTTGAGCTTGTTGGAAGACACACCCAACAACTCCGGCTGGCC
TAAGGTACTTTACTGACCTGTACTAAGATTCACCAGTCCTTAAAACCGAT
GGAACTCGTCCCTGAATTATCGTGAAAAACGGCGTTTTTTTTTATGTTCT
TGCGAAACTACGCATTTCACAGCATTGTGCATCTGTCGGTCGGAGATCCT
GTCGCATCCATAGCAGGCGTTAGCCTAGGCGACAAAAATCGAGTGCTGCC
GGCCGGGAAGTCCCTCGCGGTGAGCCTGGACCGCCTGCCTGCCTCTCCGC
GGTGTACGATCACGTTTCATGGTTCGGCTTCAATGATTTGCATGGTTGCT
TTTTTGCTTATTTGAAAAATCTGAACGCATTTAAACTCTTTTCCGGTACT
TTTAACATGCCTACTTCATACTCAGTATCAATAGTGGGTGTGGGAAAAGA
GAGGCGTACTCCCGGTCGCCCCGGTAGCTCAGAGGTACCTCGTAACCCTC
TTGACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCAC
TAAAAACACAAAAAACTAAAATAAAGATAGGGTAGCTATCGCTATACGCT
CGCTAAGGCCGAGTCTTAACGATGTTCCGAAAATCAAAATCGGAAAATCA
AAAATCAAAAAGCAAAGATTGATTTGCAGAAAAACACTGCGAGCCATATT
AACGGAAAATACTCGAACGGGCAATTAACGCCGCCAGTATGTAAAACCTC
TCGTGGCGTTGGAAAAATCCAGTAAAATTTCAATTTTACACCACAGCAAG
CAGTAGTACTACTGCTGTACTGCTGTCTCTAGTTTTATCGTTTGTGCTTT
CGACGTGCGGGTGGACAGTACCCTTCCTCACTTCTAATGTTCTTGTTGGT
TGTGGTGACTGCGGTGCTGTTGTTATTGTTTTGTCGCGTATAACGGCGTG
CAAAGAATCAGGCCTGTGGTCACAAATCGAAAAATAATACTTGCCAGAAG
TGTGTGTAAGTATGTGTGTTTTCGTGTACTGTGCTGTGTTGTTTGTGTGT
TTGTGTTTTCTTCCCACAAATCGTTGGACGTACCAGTCGGGGTCACGCAG
GAGGAATGTCACACAGGATTTCTCATCCACCTTCCTTCTGCGGTGCGTGC
CTTAATTTTTCTCCCGAGAAGGACTCAGCCGTTCCTTTCCCTCGTCGACC
GTGAAGTCGGATTTTGAGTATTTACAAATCAATCGTTCTCCACTTGTTGG
GAATTTTTATTAGGAAGTAGACAATAAATGCCGTTTGTACCAACACTTAG
AGAAAGACAGGCAACAGCAGCAGTAGAACTACTGGTACATAGTACACGTA
CGAAATCTATCTGTGCTGGGTAGACGCTGCAGAGAGTGTGTGTGGAGGCT
ACAACCATCGCATGCATTGCTTCGCAAGCCGATCTACAGCAGTACCGTAC
ATTACAGACAGCGACCCTCGAGTTGTATAAAATATATGTGTCATGTGTGC
TGTGACGCGGCCCCCGTGTTTCAAGTCTACCTCGAGCCTGAATTTTTCCA
AAGTTCAGTACCCGTCGCCTTTTGGGTTGTATCGGCGTCTCCAAAGTTCA
ACACCACTCGTTGCTCCTGTCCCCATCACCAGCTGGGAGAGGTAACGGTT
CCCACTCGCCGTGGGACCGTTGGCGTGGGCCATGCCAGCCAGCAGAAGTT
GTGTGTATGGTGTGGCGGTGCAGTCTGTCTACGAGCTGCTGTTGCACTGC
TGTGCTCTGGCCTCTGGCGTGTAGCATTCGGAAAGCCTTCGATAGGATGA
ACACCCGATATATTGATTTTGATTTTATTTAAAATAAGTCCCTGGGGACT
TCTTTGGTTTGACAGCATTTTCTAAAAAATCAAATAGCGTAGTCGGCAGG
TTTTAGTACCTCGACCAATCAGAGCCCAATTTTGATTTTGATTTGTTCCG
ATTTTGATTTTCGGAACATCGTTAAGACTCGGCCTAAAGGATAGTTTGGT
AACTATCGTCAGCTGTACACAGGTGTTGGTTTTTAATCAAACAGGGCAAG
TAATTCGAAGTTCCACGTTCCTGCCCTGAACACAGGTGTTGGTTTAACCA
AACAGGGGGCGCACATCACGAAAAGGAACATACGGCACATTCATGATTGG
TCAAAGTGCCCCGTATTTTGATACACCCGAGCTCAAATTGGTACAGCACA
CAGATTAGAAGCTCGCTAAACGCTCGCAAAAATGCCCAACGGGTGGAGAA
CGATTAATTCATTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAA
GGAATGGCTGAATGCTTGTCGCGATAAAAATTAAGGCACGCACCGCAGAA
GGAAGGTGGATAAGAAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGC
TTGTACGTCCATTGATGTCGAGATGGATGGGAAGAAAACACACACATGCA
AAGGCAAACCCGGTTGCTGGAACTACCTTGAGGACTACTGTCCCTGTGTC
GGCGGACTTTCGGCAGTGAACGCCATCGGTACGCACTTGCGTTACCCGAT
AAACTCGGGACCGACCTGATGGCGTATGGCAGTTTAAGTAAACAAATGGC
CGCCACCGCGGAAATCGGGAGGAATCCCGTGGGCAAGCACCAGATTCAGC
CTGAGCATGGAAAATGAGCAGGCTGACGCGGGACGGGACGGCTGAACCCG
TCTCGTGAGACCAATTTCTCAGGCGCGAACGGGGACAGGGAAATATTAAT
TTTCCCTGTTCAGCTGACTACGGGCAGGATTGGCAACCTTACCCGGTTGA
AACACTCTGCTATACGCGATATGACTATGCATACATACATTTAACAGAAT
CCACACAATCGGGGGGGGGGGTAAATTGTGTCGAAGCGTTCAGGTGGGAA
CGTGGGCTGTGAGCACAAAACCTCGGAATGGGATCCAGCAGATACTGTAT
TACATTTGCATAGGGTCAACAGTAAAATGCCGAGGAAAAATCTGCAGTTA
GTTATGCTTTCTGTACAAATATCGCTACTGCTGTATGTATGTAGAAACAC
CACGCTAAGAGAAAGTAATAGTATTAGAAAGTGGTTGAAGTTCATAAACT
AGTAAGACTGTACCGGGTAATAACGTATTCGAGACGTGCTTTAGTTGGGG
ATATGTCTCTCGATCATGCTCCAAGAAGTTACCATATGGGTTTTCAAGTA
CGGTCTGCAGCAGCAGCCCCGCTGACAAGCAGTCGCGAATGAGAGTACAG
TATAGTACCTGTGATTAGATGCAGATAGCATCACTGCTCATCCCTAGATT
TATTCCACCCGTGTGTGTTCCCGTTCTGTCTGGCGCTGATAATCGAGACC
CATCAACATGTCGCTCGGATGATGACGCATTGCCTTTCACGCTTGCTTTC
CACCTATCATATTAATAGAATACATGACCTCCCTTCGGAGAGTGATCGTC
ATGCCCGGTGACGTTACCCCTTCTCAGCGCGCACATTCAGTGATATCCCT
CTGGATACTACTATTAATAGTACCTATAACTTGGCTTCCCCTCTCTCGCC
TTGCGTTTGGTCGCGTCGATTTCTCAAGGGCTCCTTAGCCGCGTTCTTTG
CGTGTGCGACATCGACCCTGCTTCTGTTCGGCTGGTGCCGAGAGGGAGCA
ACGCTGGCCGAAAACCCTCTGAGTCTCGGCCTCGAGGGAAGCAACGGCAG
CAATAAACTTCTAGTATTTAGCAATATAAACGCTTGCAACCTTGGTTGCG
GCGATGATCGTCACCTGTGTACGGATTCTCGTCGCTTTTTGTTATTCACG
TCATTTCTAGGAGGTTTGAGCGGGGCGACAGGAGAGCTGCTCCCTCTCCG
AATGGATGATAACCTGTCCATGCCAATCGTTTCGGGCGCGGTGTTCTTGA
CATTGTACCGGTGGCTCATCCCCAGCTTATTTTGCAACCAAGCAGGATTT
GAACAGCTTGAAGAAGCACGGTTTTCACCGGTACAGTAACGTGATTTGAC
TTTTTCCGCAGCTTTTCCTCTCCGATATGCAATCATTGCATTGCACAGGG
AGGTAATAGGCTTGATCGTAGGGACGCAGGACAAGAGGTGAAAAGATCAC
AAGCACACAGATCACTGTGTTTTGTAACACGTACAACTACAGCATTAAGT
AGATAATGTCAATATATCTATCGATGGTGAGAGGAACAGCGTTTGGTACC
ACCTTGGGGCTTGTAATGTAACTTATTATGTAAGTTATCACTTGCGGGAT
AAATGGATTTTGGTCACTGTGAGGGGTTTGTAAAGAGGTTTATTTTTTCA
GGAGGTGGGAGGGACTTTATCGGCTAGTATGAGGGACATGATGTCTTTCA
CGGTGTACGTCGTAGGGGGAGTAAGGGTAGGGTACGCTGTTCACCCTGCC
TTACTTTTTCAGCTGCACTAGACATATGGAACAAAGGTCTGGCTTACAGT
TTGTACTGTATGTTACTTTGGCGACACAGATTTTTCTTCTACGCTCTCAT
CTGTCTAGGTCACACTAACAGCGCGACACAATTGCCAACTTTGCCAACCA
TGTATGGCCTCACATATAGTAAAGAGTACCATGGTATGGATTCACCTGGA
AAGGTTGCCAACATGGCGGGGTGTGATCACGCAACTTTGTCGTCCGGGTT
TAGAGTGTGTTAGAAATCAAGAATCTACGTCATGGATGTACACGGTATTT
TTTTTGTATTTTTAAGGAAAAATGTGGATGCATTTTTATGCCTATTAATA
GTGAGCATTCCCCAGTCAGGGGGGAAAGGTAAGGTAGGCTGCGAATACAA
AACCTGTAGTGTGCGTGGGAAGGGAAAGGAAAATGACCAGGTAGCATAAT
AGTTTAATCGTGCATATCCCGTGCAGTTTTTGAAACAGCACACTGGCCGG
TTAGATCACAGATTATCCCGTCATGTGGTACATACATATGATAGTTTAAT
ATATGTATGGTTACACATACAAAGCAAGATTATGGATCAACCGGGTTAGA
TAGCCAATCGTGCTCTTGGTCAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1240:167697..174020-

>mRNA_F-serratus_M_contig1240.1846.1 ID=mRNA_F-serratus_M_contig1240.1846.1|Name=mRNA_F-serratus_M_contig1240.1846.1|organism=Fucus serratus male|type=CDS|length=1866bp|location=Sequence derived from alignment at F-serratus_M_contig1240:167697..174020- (Fucus serratus male)
ATGGATAGCGCGATCGTTGTTGCGATATGCTTGGCGATTCCGCTCGGTTT
CTCCTATAGTGGTAGCGGGAAGGTGGGGCTAACGACGAAGCGGGGACTTA
CGAACAGTACTAAGTGTACGGCTCACAGTATTCACTGGAGAAGAAGGCTT
CAGCACGCTTCTTGCGGCCTAGTCATTGCCTCGGGATACAAGTGGGTCCT
AAGAGACGCGTGGACAGATGGATAGCGCGATCGTTGTTGCGATATGCTTG
GCGATTCCGCTCGGTTTCTCCTATAGTGGTAGCGGGAAGGTGGGGCTAAC
GACGAAGCGGGGACTTACGAACAGTACTAAGTGTACGGCTCACAGTATTC
ACTGGAGAAGAAGGCTTCAGCACGCTTCTTGCGGCCTAGTCATTGCCTCG
GGATACAAGTGGGTCCTAAGAGACGCGTGGACAGTTGTGGCAGTCCTTTG
CTTCTGCTGCACGGGCTTCTTCGGGTTTCACGTGCTGAGGTGCCGGATGC
AAGCCTTGAACGAGGTCTATATCAGGACATTCGGACCGTTGCTTCGACCG
CACGAGTTGCGTGGACTGCCGGGGGCGTTCTGGTTCTTGCTTGGCACGGC
CGCCGCCGTTGCCATCTTTCCTCGAGACATTGCTTTGCAGAGTTGTGGCA
GTCCTTTGCTTCTGCTGCACGGGCTTCTTCGGGTTTCACGTGCTGAGGTG
CCGGATGCAAGCCTTGAACGAGGTCTATATCAGGACATTCGGACCGTTGC
TTCGACCGCACGAGTTGCGTGGACTGCCGGGGGCGTTCTGGTTCTTGCTT
GGCACGGCCGCCGCCGTTGCCATCTTTCCTCGAGACATTGCTTTGCAGAG
CATTGTGCATCTGTCGGTCGGAGATCCTGTCGCATCCATAGCAGGCGTTA
GCCTAGGCGACAAAAATCGAGTGCTGCCGGCCGGGAAGTCCCTCGCGCAT
TGTGCATCTGTCGGTCGGAGATCCTGTCGCATCCATAGCAGGCGTTAGCC
TAGGCGACAAAAATCGAGTGCTGCCGGCCGGGAAGTCCCTCGCGGGCTCC
TTAGCCGCGTTCTTTGCGTGTGCGACATCGACCCTGCTTCTGTTCGGCTG
GTGCCGAGAGGGAGCAACGCTGGCCGAAAACCCTCTGAGTCTCGGCCTCG
AGGGAAGCAACGGCAGCAATAAACTTCTAGTATTTAGCAATATAAACGCT
TGCAACCTTGGTTGCGGCGATGATCGTCACCTGTGTACGGATTCTCGTCG
CTTTTTGTTATTCACGTCATTTCTAGGAGGTTTGAGCGGGGCGACAGGAG
AGCTGCTCCCTCTCCGAATGGATGATAACCTGTCCATGCCAATCGTTTCG
GGCGCGGTGTTCTTGACATTGTACCGGTGGCTCATCCCCAGCTTATTTTG
CAACCAAGCAGGATTTGAACAGCTTGAAGAAGCACGGTTTTCACCGGTAC
AGTAAGGCTCCTTAGCCGCGTTCTTTGCGTGTGCGACATCGACCCTGCTT
CTGTTCGGCTGGTGCCGAGAGGGAGCAACGCTGGCCGAAAACCCTCTGAG
TCTCGGCCTCGAGGGAAGCAACGGCAGCAATAAACTTCTAGTATTTAGCA
ATATAAACGCTTGCAACCTTGGTTGCGGCGATGATCGTCACCTGTGTACG
GATTCTCGTCGCTTTTTGTTATTCACGTCATTTCTAGGAGGTTTGAGCGG
GGCGACAGGAGAGCTGCTCCCTCTCCGAATGGATGATAACCTGTCCATGC
CAATCGTTTCGGGCGCGGTGTTCTTGACATTGTACCGGTGGCTCATCCCC
AGCTTATTTTGCAACCAAGCAGGATTTGAACAGCTTGAAGAAGCACGGTT
TTCACCGGTACAGTAA
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