mRNA_F-serratus_M_contig1240.1845.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 1.370e-159 Identity = 227/275 (82.55%), Postives = 252/275 (91.64%), Query Frame = 3
Query: 33 GRPGPEEPQFPWRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTCGTPCG 857
GR P EP FPWRSDML GK AIVTGGSAGIGAAITIALL+AG +VAVL+RSRSK+DKL+P ++E++LP DK TFIS+DLS D IR+A EANEWAGGCADILVNNAGVA+IAP++EA+VEDWD+ MNVNVRAPFI+ Q+CAKRMI RG+GGKIV+ SSTASLFALHDHAAYCTSKAAIQGLT+VM+AEWSKYDINCNTVGPTIVLTDMGAKAWG+P KGDPMIDRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITT GTPCG
Sbjct: 4 GRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPV--DKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 423 bits (1087), Expect = 5.950e-144 Identity = 209/261 (80.08%), Postives = 232/261 (88.89%), Query Frame = 3
Query: 78 MLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTCGTPCGI 860
ML K AIVTGGSAGIGA+IT ALLRAG +VAVL+RSRSKFD LLP ++EK+LP DK FI +DLS DDIRRA EAN+WAGGCADILVNNAGVA+IAP++EAT+EDWD+ MNVNVRAPFI+ Q+CAKRMI RGKGGKIVN SSTAS FALHDHAAYCTSKAAI GLT+VM+AEWSK+DINCNT+GPTIVLTDM KAWG P KGDPM+DRTPLGRFAEPWEMAHGV++LVSPSS QMCGQMLLLDGGITT GTPCG+
Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPV--DKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCGV 259
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 425 bits (1093), Expect = 1.220e-141 Identity = 224/343 (65.31%), Postives = 248/343 (72.30%), Query Frame = 3
Query: 33 GRPGPEEPQFPWRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNV------------------------------------------NVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLT-------------------------RVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTCGTPCGI 860
GR PEEP FPWR DML GK AIVTGGSAGIGA+IT ALLRAG +VAVL+RSRSKFD LLP ++EK+LP DK FI +DLS DDIRRA EAN+WAGGCADILVNNAGVA+IAP++EAT+EDWD+ MNV NVRAPFI+ Q+CAKRMI RGKGGKIVN SSTAS FALHDHAAYCTSKAAI GLT +VM+AEWSK+DINCNT+GPTIVLTDMGAKAWG+P KGDPM+DRTPLGRFAEPWEMAHGV++LVSPSSSQMCGQMLLLDGGITT GTPCG+
Sbjct: 133 GRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPV--DKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGV 473
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 256 bits (653), Expect = 1.550e-78 Identity = 134/261 (51.34%), Postives = 182/261 (69.73%), Query Frame = 3
Query: 60 FPWRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITTC 842
FP+R +L ++A+VTGG+ GIG AIT AL++AG + AV++RS++KFD +L + + L S+D FI DL D AG A WA G DILVNNAGVA + PL E VE WD M VN RAPF++ Q CA MI++ + GKI+N+SS A + DHAAYC SKAAI LTRVM EW+K++I N++GPT+V+T+MG + WG + G+PM RTP+GRFAEP E+A+ V++L S +S+ +CGQ LL++GG+T C
Sbjct: 7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDT--HEFLQGSAD---FIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLTIC 260
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: M1USM2_CYAM1 (Short chain dehydrogenase/reductase family protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USM2_CYAM1) HSP 1 Score: 213 bits (542), Expect = 4.730e-62 Identity = 118/260 (45.38%), Postives = 162/260 (62.31%), Query Frame = 3
Query: 66 WRSDMLEGKKAIVTGGSAGIGAAITIALLRAGC-AVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDE-ANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKR-MIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 836
+RSD L+GK A++TG S GIGAAI L AG +A++SR+ S+F L K + K+ F S++L+ + + R + +W DILVNNAG+A + PL E + DWD M VNVRAPF+L + + MI RG GGKI+++SS A+ + +HAAYC SKAA+ LT+ MA EW Y I CN V P+I++TDMG + W DP K P++ R P+GRFA P E+A V+FL SP + + GQ + DGG T
Sbjct: 3 FRSDALQGKVAVITGASRGIGAAIAECFLEAGVQGLALISRTPSEFVTQL----RKRAESRGTKVGFYSLNLADTEAVERTARQIVQDWEH--VDILVNNAGIALLNPLTELSTVDWDLTMTVNVRAPFLLSRIFVRESMIPRGAGGKIIHISSVAAFGGVPEHAAYCASKAALNSLTKTMAVEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD) HSP 1 Score: 211 bits (538), Expect = 1.840e-61 Identity = 121/260 (46.54%), Postives = 167/260 (64.23%), Query Frame = 3
Query: 66 WRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVL-SRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEA-NEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKR-MIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 836
+R+D+L+GK A+VTG S GIGAAI L AG + VL SR +++F L K EL S ++ F S++L + R ++ +W+ DILVNNAG+A + PL E ++ +W+ M VNVRAPF+L + + MI RG GGKI+N+SS ASL + +HAAYC+SKAA+ LT+ MA EW Y I CN V P+I++TDMG + W DP K P++ R P+GRFA P E+A V+FL SP + + GQ + DGG T
Sbjct: 3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEFVHQLR--KRAELKGS--RVGFYSLELEDTAAVERCAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI) HSP 1 Score: 213 bits (541), Expect = 7.380e-61 Identity = 108/270 (40.00%), Postives = 172/270 (63.70%), Query Frame = 3
Query: 27 MAGRPGPEEPQFPWRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 836
M GR GP+EP P+ D+L GK+A+VTGG+ GIG AIT+AL++AG V V++ + + + ++ + + + + ++ DL + +A +WAGG DILVNNAG+ + ++ + + +D + +N RAP ++ Q C + MIK K GKIVN++S +++ A HA+YC SKAA+ GL + + ++++I N + PT+ +DMG K WGDP+K PM++RTP+GRF EPWE+A+ V+FL S + + GQ + +DGG T
Sbjct: 72 MIGR-GPQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERHGFDDTEGTGN-VYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMIKN-KSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 338
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT) HSP 1 Score: 209 bits (533), Expect = 1.070e-60 Identity = 111/252 (44.05%), Postives = 157/252 (62.30%), Query Frame = 3
Query: 81 LEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 836
L GK+A+VTG S G+GA I AG VA+++R + +++ + I+ DL + R A A E G DILVNNAG+ + L EAT++ WD M +N+RAPF+L ++ A RMI++G G KIV++SS A + L +H AYC SK +Q L VM AEWS+++I N + PT+V+TDMG + W DP+K PM+DR P+GRF EP E+A +FL SP+S +CGQ++ +DGGIT
Sbjct: 10 LIGKRALVTGASRGLGAQIATLFAEAGADVALVARDEEGLHQTKATVE-----AGGRQALVIAADLGTTEGPREAASTALEHFGAI-DILVNNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFLASPASDFVCGQVIEIDGGIT 254
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: UPI00041FB755 (glucose 1-dehydrogenase n=1 Tax=Propionicicella superfundia TaxID=348582 RepID=UPI00041FB755) HSP 1 Score: 205 bits (522), Expect = 3.870e-59 Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 3
Query: 81 LEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGIT 836
+ GKKAIVTGGS GIG A + L AG VA++ R + + E + + + + ++ D+ R+A +A GG ADI+VN AG+A IAPL E + EDWD + VN+ APF Q+ MI + K GK+VN+SS A + AL H AYC SK I LT++MA EW +I N V PT++LT MG K WGDP+K DPM+ + PLGRF +P E+A V+FL S +S + G ++L+DGG T
Sbjct: 9 VSGKKAIVTGGSRGIGQACAVVLAEAGAEVAIVGRDTAALAE-----SEALVKAAGNPVHVVTGDVLTASGARQAARDALAALGGVADIVVNCAGIARIAPLTELSQEDWDDTIAVNLTAPFAFTQEVVGPMIAQ-KSGKVVNISSQAGVIALDGHGAYCASKGGINMLTKMMALEWGPSNIQVNAVAPTVILTPMGTKVWGDPAKADPMLAKIPLGRFGQPVEVADLVLFLSSSASDLITGDVILIDGGYT 254
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Match: A0A7S2ZM87_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZM87_9RHOD) HSP 1 Score: 206 bits (524), Expect = 1.310e-58 Identity = 119/253 (47.04%), Postives = 162/253 (64.03%), Query Frame = 3
Query: 81 LEGKKAIVTGGSAGIGAAITIALLRAGCAVAVLSRSRSKFDKLLPSIKEKELPTSSDKLTFISMDLSCVDDIRRAGDEANEWAGGCADILVNNAGVASIAPLVEATVEDWDFAMNVNVRAPFILGQDCAKRMIKRGKGGKIVNVSSTASLFALHDHAAYCTSKAAIQGLTRVMAAEWSKYDINCNTVGPTIVLTDMGAKAWGDPSKGDPMIDRTPLGRFAEPWEMAHGVIFLVSPSSSQMCGQMLLLDGGITT 839
L+ +K +VTGG+ GIG +I+ A + AG VAV++ ++ +++ S+ E + I DL + GDEA E G D+LVNNAGVA + L +VE WD M VNVRAPF+L Q ++ MI+R + GKIVNV+S +H HAAY SKAA+ LT+ M EW KY+I N+V PTIV+TDMG KAWGDP +GDPM+ R P GRF EP+E+A V+FL S +++ + GQ+L +DGG TT
Sbjct: 76 LKDRKCVVTGGTRGIGFSISKAFMEAGAEVAVVA-TKPPTEEVTKSLSELG------RWHAIIGDLGDIKSTEAIGDEALEVLGKV-DVLVNNAGVALVDELETLSVEAWDKTMAVNVRAPFMLAQKFSRGMIER-RAGKIVNVTSVVGSRGVHLHAAYGASKAALDHLTKNMTVEWGKYNIQTNSVAPTIVMTDMGKKAWGDPERGDPMLARIPAGRFGEPFEVADAVLFLASDAANFISGQILCVDGGYTT 319 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1240.1845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1240.1845.1 >prot_F-serratus_M_contig1240.1845.1 ID=prot_F-serratus_M_contig1240.1845.1|Name=mRNA_F-serratus_M_contig1240.1845.1|organism=Fucus serratus male|type=polypeptide|length=280bp MAGRPGPEEPQFPWRSDMLEGKKAIVTGGSAGIGAAITIALLRAGCAVAVback to top mRNA from alignment at F-serratus_M_contig1240:162273..167198+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1240.1845.1 ID=mRNA_F-serratus_M_contig1240.1845.1|Name=mRNA_F-serratus_M_contig1240.1845.1|organism=Fucus serratus male|type=mRNA|length=4926bp|location=Sequence derived from alignment at F-serratus_M_contig1240:162273..167198+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1240:162273..167198+ >mRNA_F-serratus_M_contig1240.1845.1 ID=mRNA_F-serratus_M_contig1240.1845.1|Name=mRNA_F-serratus_M_contig1240.1845.1|organism=Fucus serratus male|type=CDS|length=1680bp|location=Sequence derived from alignment at F-serratus_M_contig1240:162273..167198+ (Fucus serratus male)back to top |