mRNA_F-serratus_M_contig124.1828.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig124.1828.1
Unique NamemRNA_F-serratus_M_contig124.1828.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 3.710e-65
Identity = 142/385 (36.88%), Postives = 213/385 (55.32%), Query Frame = 3
Query:   51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEE-YAVMEDAG-RASKKAKVEKSVI---LAGNSTT------AKRGTLDTMFTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            GKR+ T+  W+ M  F P     +NV C+VK K  T           TC  L K T  +      GSGT+GL  H++K HP     + E+ G +A +K  ++ ++     AG+ST       +   +L       +  K  E   +R+VI CC+++RP  M    GF+ F+G L P YV+S + + T ++ LD L  RV+ +I+  L         +GY+G   G Q D+T+  G EY TFTVS+V KG+TD+ R+ L  +AFPG HT++DI+PW  ++ ++YF   +G+ +  P+ +F+A TVDQG N++NA   LG+ V+ C+ HR++TAV WA GI G+ R       +N  +  LM  + A  GVFSHS  NND  K +Q+
Sbjct:   77 GKRRLTAWCWQVMSRFTP-SINDKNVVCLVKKKDGT-----------TCNHLMKWTPSEGKQ--RGSGTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGE-DVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR-------RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQR 439          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 2.390e-58
Identity = 139/398 (34.92%), Postives = 199/398 (50.00%), Query Frame = 3
Query:   51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAG------------NSTTAKRGTLDTMFTRPMSDKEM------------EEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            GKR+ TS  W F   F  P   G+NV C+VK            A    CG L K        G  G+GTSG+  HL+  H  E     D  +A   A  + +  +               +  ++ G +  +++ P S   M            +    R+V+ CC+D+RP  +    GF+ F+G L P YV + +  +T  + LDEL   V  +++ +L         +GY+GP  G Q D+T+  G EY TFTV+FV KG TDM R+ L  +AFPG HT+EDI PW  ++  +YF   +G+ +  P  +F+A TVDQG N++NA   LG+ V+ C+ HRL+TAV WA GI G  R N        ++  LM  + A  GVFSHS  NND  K +Q+
Sbjct:   70 GKRRLTSWTWNFASRF-SPSINGKNVVCLVK-----------KADGTPCGRLMKWE--GAALGKKGTGTSGISKHLEICHKSEV----DKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGE-SVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRLNP-------AMGTLMKKLAAMVGVFSHSAVNNDELKELQR 441          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.390e-55
Identity = 107/250 (42.80%), Postives = 152/250 (60.80%), Query Frame = 3
Query:  423 MSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            M  K+ E   +RYVI CC++ RP  M    GF+ F+G L P YV + +  TT  ++LD L +RV  A++  L +       +GY G   G Q D+T+  G EY TF VS+V KG TD+ R++L T+AFPG HT++DI PW   +  +YF  ++G G+   + +F+A TVDQG N++NA   LG+ V+ C+ HR+++AV WA GI GS       TCKN  ++KL A +    GVFSHS  NND  K +Q+
Sbjct:    9 MLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT-----TCKNKPMKKLAALV----GVFSHSAVNNDMLKELQR 248          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 3.890e-55
Identity = 107/254 (42.13%), Postives = 151/254 (59.45%), Query Frame = 3
Query:  414 TRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATD-MERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            +R M  K+ +   +RYVI CC+++RP  M    GF+ F+G L P YV + +  TT  ++LD L +RV+ AI+  L         +GY G   G   D+T+    EY TFTVS+V KG TD + R+ L T+AFPG HT+EDI PW   +  +YF+ ++G  +  P  +F+  TVDQG N++NA   LG+ V+ C+ HR+++AV WA GI G  R     TCKN  +  LM  + A  GVFSHS  NND  K +Q+
Sbjct:    2 SRKMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGP-SVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCAR-----TCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQR 249          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.610e-54
Identity = 104/247 (42.11%), Postives = 153/247 (61.94%), Query Frame = 3
Query:  432 KEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            K+ E   +RY+I CC+++RP  M    GF+ F+G L P YV + +  TT  ++LD L +R++ A++  L +       +GY G   G Q D+T+  G EY TF VS+V KG TD+ R++L T+AFPG HT++DI PW   +  +Y   ++G G+   + +F+A TVDQG N++NA   LG+ V+ C+ HR+++AV WA GI GSV      TCKN  ++KL A +    GVFSHS  NND  K +Q+
Sbjct:   12 KQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVT-----TCKNKPMKKLAALV----GVFSHSAVNNDMLKELQR 248          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.290e-52
Identity = 102/239 (42.68%), Postives = 144/239 (60.25%), Query Frame = 3
Query:  456 RYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            R+V+ CC+D+RP  +    GF+ F+G L P YV + +  +T  + LDEL   V  +++ +L         +GY+GP  G Q D+T+  G EY TFTV+FV KG TDM R+ L  +AFPG HT+EDI PW  ++  +YF   +G+ +  P  +F+A TVDQG N++NA   LG+ V+ C+ HRL+TAV WA GI G  R N        ++  LM  + A  GVFSHS  NND  K +Q+
Sbjct:   16 RFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGE-SVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRLNP-------AMGTLMKKLAAMVGVFSHSAVNNDELKELQR 246          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.770e-52
Identity = 138/409 (33.74%), Postives = 205/409 (50.12%), Query Frame = 3
Query:   51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEY-AVMED-----AGRASKKAKVE-----------KSVILAGNSTTAKRGTLDTMFTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPW--------FRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQ--QEVVSVLDE 1196
            GK+ + S +W+  + F P  + G+NV C+                   C  L      D        GT G+  H +K HP  Y A+M+D      GRA+  A V            K    AG+ST + +  + T    P+        + R+V+ C +++RP NM    G++  +G LCP YV+S +   T   IL  +      A+   L  H  S  +LGY GP  G Q D+T+    EY TF+VS++ + AT + R+ L T+AFPG HT+ DI PW        F+ +  ++F  ++G+ N  P+ +F+A TVDQG N++NA   L ++VL C+ HRL++   WA GINGS+R     T +N ++ KLM  + A  GVFSHS  NND  K +Q  QE   ++ E
Sbjct:   68 GKKTKRSWVWQVCREFKPLIN-GKNVFCMA------------------CKHLMLWKPAD--------GTGGMSSHYKKKHPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQT--GNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGE-NVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIR-----TGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYE 441          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 6.390e-32
Identity = 94/292 (32.19%), Postives = 136/292 (46.58%), Query Frame = 3
Query:   51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAG------------NSTTAKRGTLDTMFTRPMSDKEM------------EEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQV 854
            GKR+ TS  W F   F  P   G+NV C+VK            A    CG L K        G  G+GTSG+  HL+  H  E     D  +A   A  + +  +               +  ++ G +  +++ P S   M            +    R+V+ CC+D+RP  +    GF+ F+G L P YV + +  +T  + LDEL   V  +++ +L         +GY+GP  G Q D+T+  G EY TFTV+FV KG TDM R+ L  +AFPG HT+EDI PW  + 
Sbjct: 1154 GKRRLTSWTWNFASRF-SPSINGKNVVCLVK-----------KADGTPCGRLMKWE--GAALGKKGTGTSGISKHLEICHKSEV----DKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKA 1427          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 6.460e-30
Identity = 86/256 (33.59%), Postives = 127/256 (49.61%), Query Frame = 3
Query:  105 PDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAGNSTT----AKRGTLDTM--FTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQV 854
            P    +NV C+VK K  T           TC  L K T  +      G+GTS L  H+ K HP       D G  + + +  ++ I+ G        +KR  L         M  K  E   +R+VI  C+++RP  M    GF+ F+G L P YV+S + + T ++ LD L  +V  +++  L         +GY+G   G Q D+T+  G EY TFTVS+V KG+TD+ R+ L  +AFPG HT++DI PW  ++
Sbjct:  214 PSINDKNVVCLVKKKDGT-----------TCNHLMKWTPSESNK-QRGTGTSWLSKHIAKAHPATAKTRRDEGTPADRKEPIRAAIVHGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEEL 457          
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.060e-22
Identity = 65/189 (34.39%), Postives = 102/189 (53.97%), Query Frame = 3
Query:  606 ERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
            +  + +++A+L+     +K++GY  P   L S  T+    ++    +  +  G +    L+L TK F G+HT   I  W  Q+    F+ I+      P  +++A TVDQG N++NA   LGI  + C GHR+ ++V W  G++GSV      T KN   R L+    ACAG+FSHS  N+DAF+ VQ+
Sbjct:    3 QTAKTSLVAQLKEAYEELKKIGYHLPRPVLLS--TAGLDIDWHRRVLHSLGVGDSLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPA--VVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVSGSVA-----TQKNKKGRVLVGRCAACAGMFSHSCTNSDAFRLVQE 182          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JRT6_9PHAE3.710e-6536.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGG8_9PHAE2.390e-5834.92Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5JQI6_9PHAE2.390e-5542.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXV5_9PHAE3.890e-5542.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU3_9PHAE1.610e-5442.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.290e-5242.68Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE2.770e-5233.74Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVP4_9PHAE6.390e-3232.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ9_9PHAE6.460e-3033.59Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
D7G7X8_ECTSI5.060e-2234.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig124contigF-serratus_M_contig124:561680..564829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1305
Cds size1188
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig124.1828.1prot_F-serratus_M_contig124.1828.1Fucus serratus malepolypeptideF-serratus_M_contig124 561711..564743 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.092607-UTR-F-serratus_M_contig124:561679..5617101622929165.092607-UTR-F-serratus_M_contig124:561679..561710Fucus serratus maleUTRF-serratus_M_contig124 561680..561710 -
1690962731.3680694-UTR-F-serratus_M_contig124:561679..5617101690962731.3680694-UTR-F-serratus_M_contig124:561679..561710Fucus serratus maleUTRF-serratus_M_contig124 561680..561710 -
1622929165.1968637-UTR-F-serratus_M_contig124:564743..5648291622929165.1968637-UTR-F-serratus_M_contig124:564743..564829Fucus serratus maleUTRF-serratus_M_contig124 564744..564829 -
1690962731.4276133-UTR-F-serratus_M_contig124:564743..5648291690962731.4276133-UTR-F-serratus_M_contig124:564743..564829Fucus serratus maleUTRF-serratus_M_contig124 564744..564829 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.1198564-CDS-F-serratus_M_contig124:561710..5618091622929165.1198564-CDS-F-serratus_M_contig124:561710..561809Fucus serratus maleCDSF-serratus_M_contig124 561711..561809 -
1690962731.379887-CDS-F-serratus_M_contig124:561710..5618091690962731.379887-CDS-F-serratus_M_contig124:561710..561809Fucus serratus maleCDSF-serratus_M_contig124 561711..561809 -
1622929165.1391747-CDS-F-serratus_M_contig124:562356..5626801622929165.1391747-CDS-F-serratus_M_contig124:562356..562680Fucus serratus maleCDSF-serratus_M_contig124 562357..562680 -
1690962731.398263-CDS-F-serratus_M_contig124:562356..5626801690962731.398263-CDS-F-serratus_M_contig124:562356..562680Fucus serratus maleCDSF-serratus_M_contig124 562357..562680 -
1622929165.155462-CDS-F-serratus_M_contig124:563181..5636631622929165.155462-CDS-F-serratus_M_contig124:563181..563663Fucus serratus maleCDSF-serratus_M_contig124 563182..563663 -
1690962731.409349-CDS-F-serratus_M_contig124:563181..5636631690962731.409349-CDS-F-serratus_M_contig124:563181..563663Fucus serratus maleCDSF-serratus_M_contig124 563182..563663 -
1622929165.1726823-CDS-F-serratus_M_contig124:564460..5647431622929165.1726823-CDS-F-serratus_M_contig124:564460..564743Fucus serratus maleCDSF-serratus_M_contig124 564461..564743 -
1690962731.4186463-CDS-F-serratus_M_contig124:564460..5647431690962731.4186463-CDS-F-serratus_M_contig124:564460..564743Fucus serratus maleCDSF-serratus_M_contig124 564461..564743 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig124.1828.1

>prot_F-serratus_M_contig124.1828.1 ID=prot_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=polypeptide|length=396bp
MQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVA
GISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAGNSTTA
KRGTLDTMFTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGG
LCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPM
FGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIA
PWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLI
CSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHS
PCNNDAFKAVQQEVVSVLDEAAQLTAQVQGGTMPSWARRSTTLPC*
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mRNA from alignment at F-serratus_M_contig124:561680..564829-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig124.1828.1 ID=mRNA_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=mRNA|length=3150bp|location=Sequence derived from alignment at F-serratus_M_contig124:561680..564829- (Fucus serratus male)
CTGCAGCGCTCTCTGCTGCTCCTGGCACCACCGCGGTCGGGGCTGGTGTT GGGAAGCGCAAACAAACGTCTTCCATTTGGCGATTCATGCAACTCTTCGT ACCGCCCGATTCTAAAGGAAGGAACGTCAAGTGCATCGTCAAGATTAAAC TGCCTACGTCTGTTGGAAATGTGTTGCCTGCACGCACTAAGACTTGTGGC GCACTGTTCAAGCACACCAAGGGTGACCGGGTTGCTGGGATTAGTGGTTC GGGAACAAGCGGCTTGAAACATCACCTTCAGAAACACCACCCAGAGGAGT ATGCAGTCATGGAAGACGCGGGCCGCGCCTCCAAGAAAGCGAAAGTGGAG AAGAGCGTCATCCTGGCAGGTGAGGGTTGTGCTGTGCTGTGTAGCTGCTT GTTTATGAGCGACTGCTGAGTTCAGCTGCTCTATTACTGCCGTACCAGGT CACTGAAAAATGAAAAATGAAATCTGGAAAACCGGGAAAAAGGAAAAATC ATGTACTACTGCTGCTGTATCATATGATTCAACAGCAGTATATATAAGAG TTTTGTCCGACGTTGTAATTTTTATATTTAGTATTGCATTTGAACGACTA CTACCAGGTACACAGCAGTACTGCTGTACCGGTATGGGCCACGCTGCTGT TGGAAATTGAGTTGAAAAGTCATTCACTTCGAAGTATCGCAGTATTTCTC CGGAGCACCTACTGTATATGCTTTTCAAATTGAAATGCGCCACCTACAGC ATGACTCCTCCGAAGAATTAAAAATTACAGAAGTTAAACAGGAGGACAAT GCCAAAATGGCAAAACAAATTGATGTCTTCGTTAGGAAAATAAAAAACTG CACACTGCTGTATGATGCACATATTCAAATACACGACAGCTGTAGTGCAG TTTGCCTTTTGAAACATATAATACAGCAGCATATCATATTATACTACAGA GTACTCCGTACATTTGTTGTACCTGTATAATTTCACCAGATTTTACAGAG AAATAAAGAGCACGACCCTCGCCCTTCTCGTCCTGTCGGCTCTTCCTGCC GTTCCCTGTGCCCTGCTGTCTCCTGTGCTGTTTGAAGTAGCCTTTGCAAA GTACATAAACAAATTTGCGTTAATTGGTTCCATCGCACCTCACACGCGCG CGTTTGATCGCTGCAGGAAACTCCACGACGGCAAAAAGGGGGACCCTAGA CACCATGTTCACACGTCCCATGTCGGACAAGGAGATGGAAGAGCACCACA TCCGGTACGTCATCATGTGCTGCGTCGACGTCCGACCGTTCAACATGGCC AGGTATACTGGATTCCAGTACTTCATCGGCGGCTTGTGCCCCTCGTACGT GCAGTCCATCATCCACCACACGACCATGGAGCGCATTCTCGACGAGTTGG GGGAGAGGGTACGCATTGCCATCATCGCAAAGCTCGAGGCACACATCAAC TCTGTGAAGGAGCTCGGGTACACGGGGCCCATGTTCGGCCTCCAGTCCGA CATGACAAGTACGAATGGTACCGAGTACTGTACCTTCACCGTCTCGTTCG TCCCCAAGGGAGCCACGGACATGGAGCGACTGACGCTCACCACGAAGGCT TTTCCGGGCAGGCACACGTCGGAGGATATAGCACCTTGGTTCCGCCAGGT TAGTTGGCGAATTGTTCACGAAGGGTACGTTTTTGTTTTTTTTTGGCGTT GTTGAGGTGTAGTACGGAAGTGCAACTGCTGCAGTCGCCCGCGAACACTC AAGTTTTTACGTTTGCCGTCGTCTACGGCGAATAATTAATATTTCACGTC GGCCGGCCGCTCACCTACTTCTAATATAAATAGACTGTTTTTGTTTTTTA CCACGGTACCACTACTGTGACCCTAAATACATAAAACGTGTACATCATCT GATACTTTTACATCAGCGTTTTGAGAAAAAAAACAGCAGTTGTCCTCATC ACATTTACAGATTTCCCAATGTTTTTTATTTTGGCTATTGGGTTTGATGC ACCTCGAGGTCACGTATTATGAAAAGAAACACGATGATGCAGAGTAAATA TCTTTGTCCCTTTTAGCTGACCGTTCCGTGAGTGTGCTGACCATACGTAC TCAACCCATGTGTACTCAACACACCCACCGTGTGTACTCAACTCTCCAGG TTATCAAGGACTACTTCGAGCCTATCCTGGGAAAGGGCAACGCGCACCCA GAGAAGCTTTTCATCGCCGGCACGGTCGACCAAGGGGCCAACATGATGAA TGCGTTGGTCATGTTGGGCATTGACGTCCTCATCTGCAGTGGACACCGGC TCAGCACCGCTGTCGGTTGGGCATTTGGTATCAACGGCAGCGTCAGAGAG AATGGCCAAGGTACGTGCAAGAACCTCTCATTACGCAAGCTCATGGCAAC AATGACCGCGTGCGCTGGCGTCTTCAGTCATTCGCCGTGCAACAACGACG CCTTCAAGGCCGTTCAACAGGAGGTGAACGAGATGGGCCGCGTCTTGGAG ATTGTTCGCCGCAACGACACAAGGTGCTCTGTTTAAAGTTGTTGTTCTTG TCTTGCAATGTCTGCCAAGATAACTAGTACCGGCAGTAAGGTGGCTCTTC TTGGCGGTCGAGGTTTTCTGTTTCCAGTAGGCAACCTTGGGCGCGTGGCT GCCTCAACATCATTGTGACTATTTCGATAGTTGTCAAACAGCACATACAG TTTGAATGATTGCTAAACTCATTTTGGGGTTTTGCTCTTTGGGTTGATCC AAACATAATTACCCCGTCTGACATCTCGTGCTTTCGCGACACTCCTTCCC GTTTATTGCTCTGTCCGCGTTAACGCCAGCAAGTCCCCATCACTCCCATC GCCGATTCCTCCTGATTTTCCTCTCCAATAGGTGGGGATCACAGCACGCG ATGCTGGACCGGCAGCTGCGGCTATACAAGGCTATTCAACAGTACTTCAT GCAAAACCTGGGCAACCGCACAGTGAGCAACCGCGCCCCCAATCCGACCG ATTGGCTAGCGGTTCAACAGGTCGTGAGCGTCCTCGACGAAGCGGCGCAG CTCACCGCGCAGGTCCAGGGGGGCACCATGCCTTCGTGGGCAAGGCGATC AACGACTTTGCCGTGCTGACGGAGTTGTTGAACGAGGACACTCAGGAAAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig124:561680..564829-

>mRNA_F-serratus_M_contig124.1828.1 ID=mRNA_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=CDS|length=2376bp|location=Sequence derived from alignment at F-serratus_M_contig124:561680..564829- (Fucus serratus male)
ATGCAACTCTTCGTACCGCCCGATTCTAAAGGAAGGAACGTCAAGTGCAT
CGTCAAGATTAAACTGCCTACGTCTGTTGGAAATGTGTTGCCTGCACGCA
CTAAGACTTGTGGCGCACTGTTCAAGCACACCAAGGGTGACCGGGTTGCT
GGGATTAGTGGTTCGGGAACAAGCGGCTTGAAACATCACCTTCAGAAACA
CCACCCAGAGGAGTATGCAGTCATGGAAGACGCGGGCCGCGCCTCCAAGA
AAGCGAAAGTGGAGAAGAGCGTCATCCTGGCAGATGCAACTCTTCGTACC
GCCCGATTCTAAAGGAAGGAACGTCAAGTGCATCGTCAAGATTAAACTGC
CTACGTCTGTTGGAAATGTGTTGCCTGCACGCACTAAGACTTGTGGCGCA
CTGTTCAAGCACACCAAGGGTGACCGGGTTGCTGGGATTAGTGGTTCGGG
AACAAGCGGCTTGAAACATCACCTTCAGAAACACCACCCAGAGGAGTATG
CAGTCATGGAAGACGCGGGCCGCGCCTCCAAGAAAGCGAAAGTGGAGAAG
AGCGTCATCCTGGCAGGAAACTCCACGACGGCAAAAAGGGGGACCCTAGA
CACCATGTTCACACGTCCCATGTCGGACAAGGAGATGGAAGAGCACCACA
TCCGGTACGTCATCATGTGCTGCGTCGACGTCCGACCGTTCAACATGGCC
AGGTATACTGGATTCCAGTACTTCATCGGCGGCTTGTGCCCCTCGTACGT
GCAGTCCATCATCCACCACACGACCATGGAGCGCATTCTCGACGAGTTGG
GGGAGAGGGTACGCATTGCCATCATCGCAAAGCTCGAGGCACACATCAAC
TCTGTGAAGGAGCTCGGGTACACGGGGCCCATGTTCGGCCTCCAGTCCGA
CATGACAAGTACGAATGGTACCGAGTACTGTACCTTCACCGTCTCGTTCG
TCCCCAAGGGAGCCACGGACATGGAGCGACTGACGCTCACCACGAAGGCT
TTTCCGGGCAGGCACACGTCGGAGGATATAGCACCTTGGTTCCGCCAGGA
AACTCCACGACGGCAAAAAGGGGGACCCTAGACACCATGTTCACACGTCC
CATGTCGGACAAGGAGATGGAAGAGCACCACATCCGGTACGTCATCATGT
GCTGCGTCGACGTCCGACCGTTCAACATGGCCAGGTATACTGGATTCCAG
TACTTCATCGGCGGCTTGTGCCCCTCGTACGTGCAGTCCATCATCCACCA
CACGACCATGGAGCGCATTCTCGACGAGTTGGGGGAGAGGGTACGCATTG
CCATCATCGCAAAGCTCGAGGCACACATCAACTCTGTGAAGGAGCTCGGG
TACACGGGGCCCATGTTCGGCCTCCAGTCCGACATGACAAGTACGAATGG
TACCGAGTACTGTACCTTCACCGTCTCGTTCGTCCCCAAGGGAGCCACGG
ACATGGAGCGACTGACGCTCACCACGAAGGCTTTTCCGGGCAGGCACACG
TCGGAGGATATAGCACCTTGGTTCCGCCAGGTTATCAAGGACTACTTCGA
GCCTATCCTGGGAAAGGGCAACGCGCACCCAGAGAAGCTTTTCATCGCCG
GCACGGTCGACCAAGGGGCCAACATGATGAATGCGTTGGTCATGTTGGGC
ATTGACGTCCTCATCTGCAGTGGACACCGGCTCAGCACCGCTGTCGGTTG
GGCATTTGGTATCAACGGCAGCGTCAGAGAGAATGGCCAAGGTACGTGCA
AGAACCTCTCATTACGCAAGCTCATGGCAACAATGACCGCGTGCGCTGGC
GTCTTCAGTCATTCGCCGTGCAACAACGACGCCTTCAAGGCCGTTCAACA
GGAGGTTATCAAGGACTACTTCGAGCCTATCCTGGGAAAGGGCAACGCGC
ACCCAGAGAAGCTTTTCATCGCCGGCACGGTCGACCAAGGGGCCAACATG
ATGAATGCGTTGGTCATGTTGGGCATTGACGTCCTCATCTGCAGTGGACA
CCGGCTCAGCACCGCTGTCGGTTGGGCATTTGGTATCAACGGCAGCGTCA
GAGAGAATGGCCAAGGTACGTGCAAGAACCTCTCATTACGCAAGCTCATG
GCAACAATGACCGCGTGCGCTGGCGTCTTCAGTCATTCGCCGTGCAACAA
CGACGCCTTCAAGGCCGTTCAACAGGAGGTCGTGAGCGTCCTCGACGAAG
CGGCGCAGCTCACCGCGCAGGTCCAGGGGGGCACCATGCCTTCGTGGGCA
AGGCGATCAACGACTTTGCCGTGCTGAGTCGTGAGCGTCCTCGACGAAGC
GGCGCAGCTCACCGCGCAGGTCCAGGGGGGCACCATGCCTTCGTGGGCAA
GGCGATCAACGACTTTGCCGTGCTGA
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