mRNA_F-serratus_M_contig1239.1811.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: D7FN45_ECTSI (Similarities to Heat shock protein 70-probable alternative splicing n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN45_ECTSI) HSP 1 Score: 651 bits (1679), Expect = 4.340e-230 Identity = 342/464 (73.71%), Postives = 389/464 (83.84%), Query Frame = 3
Query: 60 MSKIAVLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTGNDLSEAWFELKCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATIAH 1451
MSKI V+AAVVVGACAALAATGF+GR+TVVGIDLGTT+SVIG+NEG K+AIIPG +GSPLLPSVVSFL++G++ VG+DA +LLES+PA+TIYGAKRFIGR F D+AVSEEAAEH+FQLVQT DLSEAWF++K SGHPP+VSPQ VGSHV+ LL RAA YLGHSQVSKAV+AVPAKFDARQ+AATVEAFRLAGLQVIR LEEPTAAALAFGLHRKPNVNHILVYD+GGGTLDVS+LFVNDGSVEVLGSDGDDNLGGSDFDQCV H+LE KL +VALE AE AVSCGF +PTCA HNLY LSE +RR+LTDG AA ECM + EE +Q++ LR + G G +Q++ GA G C W +SL+LTR+EYE+ C +LF+RGV PV RLL LDLTVD+IDEVVMVGGMTRTP VR LL + LGVDRLNV+IDPDVVVAYGAATIAH
Sbjct: 1 MSKITVVAAVVVGACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLDNGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTKEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQVIRMLEEPTAAALAFGLHRKPNVNHILVYDLGGGTLDVSLLFVNDGSVEVLGSDGDDNLGGSDFDQCVAHLLERKLDRSIVALEEAEDAVSCGFTTPTCALHNLYPLSEGLRRLLTDGETAAVECM-IPPEE---AQRRNLRSPK-----KGTPSEDGDSQDAHR---FAGAEGERCKMWNSLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATIAH 452
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A7S3XQ15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ15_HETAK) HSP 1 Score: 416 bits (1069), Expect = 6.510e-138 Identity = 234/467 (50.11%), Postives = 299/467 (64.03%), Query Frame = 3
Query: 57 IMSKIAVLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTGNDLSEAWFEL-KCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKVVALEAAEQAVSCG---FPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
+M + ++ A++V CA LAA GFKGR +VVG+DLGTTYSVIGIN G V I+P +G L+PS V+FL +G++ VGR A LE P TIY AKRFIGR D ++ +E AEH+F+LV+ + SE WF L + GH AV+P+ VG+ V+ L A++LG+ QV KAV+AVPAKFDARQR T EA+R AGL+V+R LEEPTAAALA+GLHRKP+V+HILVYD GGGTLDVSVLFVN+GSVEV S+GDD+LGGSDFDQC+ H L +LG +V + +CG + C +H LY LSE ++R L+D + CM + G S RGG E+ V P+ W L +TR E+E C LFER + PV +L+ + LT +DEVVMVGG TR P VR L+ LGV+ LN IDPD+ VAYGAAT+
Sbjct: 1 MMGALGIIVAILVVGCAVLAAMGFKGRISVVGVDLGTTYSVIGINNGGTVEIVPDKEGHVLVPSTVAFLPEGRVAVGRAARRYLEHDPTHTIYNAKRFIGRAAADPSLVKELAEHDFELVERPGNASEGWFRLDEARGHGAAVAPEGVGARVLLHLKAMVADHLGYDQVDKAVIAVPAKFDARQRQMTAEAYRQAGLRVMRVLEEPTAAALAYGLHRKPDVHHILVYDFGGGTLDVSVLFVNEGSVEVEASEGDDHLGGSDFDQCLAHHLVARLGPDLVDAGTFRRVEACGGAMAEAHLCTQHLLYPLSEELKRRLSDQLYSDVRCMV---QRPGASSM-----------------RGG---EADVCAPAN---------WVETQLTVTRDEFEHACSDLFERAMIPVDLVLEEVGLTARGVDEVVMVGGTTRIPRVRARLKEHLGVESLNTHIDPDITVAYGAATV 435
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A835Z661_9STRA (Heat shock protein 70 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z661_9STRA) HSP 1 Score: 362 bits (929), Expect = 6.900e-117 Identity = 216/464 (46.55%), Postives = 279/464 (60.13%), Query Frame = 3
Query: 75 VLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGF-DDTAVSEEAAEHEFQLVQT--GNDLSEAWFELKC-SGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLG-DKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATIAH 1451
VL A++V CA LAA GFKGR TVVGIDLGTTYSV+G+NEG V II DGS L+PS+VSFL G++ VG A +L + A+TIY AKR IGR F D+ + E F+LV+ D S+AWF+L+ + HP A+SPQ +G+ V+R LL LGH+QV AV+AVPAKFDARQR AT +AF+ AGL+V+R LEEPTAAALA+GL + +V+H+LVYD GGGTLDVS+L+V +GSV+V+ SDGDD LGG DFD+ + VL KL A E +C F +P CA L +E +++ L+ A C+ + AT I G +C WE + +TR E+E LFER + V RL+++ +I E VMVGG +R P VR L+ RL + LN IDPDV VAYGAAT+AH
Sbjct: 4 VLIALLVAVCAVLAANGFKGRVTVVGIDLGTTYSVVGVNEGGVVRIISAEDGSYLVPSMVSFLRSGEVAVGTAARQLAGNDTATTIYEAKRLIGREFPDEEDLLAEGTGRPFRLVRKPFSEDPSDAWFDLQSMTQHPAAISPQGIGTMVVRELLRMVHLDLGHTQVRAAVIAVPAKFDARQRRATAQAFQAAGLKVVRVLEEPTAAALAYGLQNRDDVHHVLVYDFGGGTLDVSLLYVAEGSVQVITSDGDDALGGGDFDRAMASVLVAKLAAGGGGAPEGCAPRAACAFDAPACALSALRGEAERVKQELSTAEAATARCV------------RPAAAAAATLI---------------------GRCPKACAAWELTEVAVTREEFEAAAAPLFERALAAVDRLMEKSGHDAGEIQEAVMVGGTSRMPRVRADLQRRLRLSHLNTHIDPDVTVAYGAATVAH 434
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A6U1BP74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BP74_9STRA) HSP 1 Score: 330 bits (847), Expect = 1.680e-104 Identity = 194/467 (41.54%), Postives = 265/467 (56.75%), Query Frame = 3
Query: 60 MSKIAVLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTG--NDLSEAWFELKCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLE---WKLGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
M + AV V ACA +AA+GF+GR VGIDLGTTYSVI + + ++ L+PS+V F G + VG DA+ L S P + I+ AKRFIGR FDD AV E+ A H F++V S+AWF L GH VSP+ VG HV++ L D A LGH Q+++AVV+VPAKF+ RQR ATV+A++ AGL+V+R ++EPTAAA+A+GL +K +V I+VYD GGGTLDVS+L VN+ S++++ + GDD LGG+DFDQC+ L W D S P C L ++ESI+ L+D + A C G S +S+++TRS +E C LF+R + PV LL + ++IDEVV+VGG +R P +RELL+ ++GVD LN+EIDPD+ VA GAA+I
Sbjct: 26 MQWVLTAVAVAVAACAMMAASGFRGRPNTVGIDLGTTYSVIALRTLNATRVLKDEHQRSLIPSMVYFGPGGVVKVGYDAMAFLHSDPENVIFNAKRFIGRSFDDEAVQEQRAVHPFRVVNRSVPEVRSQAWFALSAQGHEDWVSPESVGKHVLQRLKDIAVFNLGHKQITRAVVSVPAKFNTRQRQATVDAYKAAGLKVMRVIDEPTAAAVAYGLDKKSDVQWIIVYDFGGGTLDVSLLMVNEESIQMIATHGDDQLGGADFDQCLMEHLRSTSWLPHDA--------DPCSPRDDVPACGDTELRPMAESIKCQLSDAQVATASC---------------------------------------------GYRNRSDEDCRELSIEVTRSAFEEACDPLFQRVLRPVDLLLGESGMPAEEIDEVVLVGGTSRIPRIRELLKEKIGVDHLNMEIDPDITVAVGAASI 439
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A7S2H244_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H244_9STRA) HSP 1 Score: 322 bits (825), Expect = 2.800e-101 Identity = 195/459 (42.48%), Postives = 254/459 (55.34%), Query Frame = 3
Query: 102 CAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTGN-DLSEAWFELKCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKVVALEAAEQAV----------SCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
CA LA G+KGR VVGIDLGTTYSVI + V ++ L+PS+V F G I VG A LE+ P IY AKR+IGR +D AV E +H F +V + S WF L GH AVSP+ VGS+V+R LLD A LGH Q++KAVVAVPAKFD +QR AT+ A+ A L+V+R +EEPTAAA+A+GL +KP+VN+ILVYD GGGTLDVS+LFVN SV+VL + GDD LGGSDFD C+T L+ ++ + E +A S P CA + QL+ES++ L+ C A PG C P+ L + R + + C LF+R + PV LL +++ ++DEVV+VGG +R P +R LL G+D LN EIDPD+ VA GAA+I
Sbjct: 15 CAILAVNGYKGRPDVVGIDLGTTYSVIALKTEYGVKVLRDEANRSLVPSMVHFGSGGAIHVGYAAESFLETEPNHVIYNAKRYIGRTYDAPAVQELEGKHGFAVVANKSVSPSGNWFSLDVPGHQSAVSPETVGSYVLRHLLDIAYFNLGHRQITKAVVAVPAKFDTQQRRATIAAYTQANLKVVRIIEEPTAAAVAYGLDKKPDVNYILVYDFGGGTLDVSLLFVNKESVQVLHTHGDDELGGSDFDYCLTSWLDEQVSTAAGSQEKLHEACGEEGYIQTVDSTSDAPPLCAPSYIRQLAESMKCSLSVNATVHESCTA------------------------------------YFPGKGGPQDSPRCA---PLQLTVERDSFHQRCSDLFDRVLSPVEALLKEINMDAAEVDEVVLVGGTSRIPRIRSLLSEYFGIDHLNTEIDPDLTVAIGAASI 434
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: F0YCK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCK5_AURAN) HSP 1 Score: 316 bits (810), Expect = 1.020e-99 Identity = 183/432 (42.36%), Postives = 243/432 (56.25%), Query Frame = 3
Query: 147 VGIDLGTTYSVIGINEGSK-VAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTGNDLSEAWFELKCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAA 1439
VGIDLGTTYSV+ ++EG K V + D L S V+FL+ G + VG A P ++ AKRFIGR FDD +V+ +A ++ F++V+ N A F L GHP A +P VG+ V++ L+ + LGH V +AV+AVPA F Q AAT +AF+ AGL+V R + EP AAA+A+GLH+K +VNH+LVYD GGGTLDVS+L+V DGS+EV+ + GD++LGG+DFDQCV L + + A ++ +A C P CARH L + E ++ ++D A C+A P E SC + TR +E+ C LF R +D V R LD LT DIDEVVMVGG +R P VR+ LR L VD+LN EIDPDV VA GAA
Sbjct: 1 VGIDLGTTYSVVAVSEGRKGVRVFDDPDRGKLTASTVAFLKGGAVAVGAAAKAHAAKDPRHVLFDAKRFIGRDFDDESVALQAKKYTFEVVKDANSTGCA-FALDVPGHPAAATPVDVGAEVVKALMRTVHDDLGHENVKRAVIAVPASFGPAQIAATGDAFKAAGLKVARVMPEPVAAAVAYGLHKKKDVNHVLVYDFGGGTLDVSILYVQDGSIEVVANGGDNDLGGTDFDQCVAEDLAADVAARTGAGDSVARAAGCEAREPLCARHVLASMGERLKIAVSDAASADAACLA----------------------------------------PRE-----SCDDLVRVEFAYTRKRFEKACDHLFVRAIDTVARTLDEGMLTHRDIDEVVMVGGTSRVPRVRDTLRDHLRVDKLNTEIDPDVTVAVGAA 386
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A7S0SSX6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSX6_9STRA) HSP 1 Score: 313 bits (803), Expect = 1.470e-98 Identity = 191/437 (43.71%), Postives = 264/437 (60.41%), Query Frame = 3
Query: 78 LAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEF---QLVQTGNDLSEAWFELKCSGHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKV--VALEAAEQAVSCGFP-SPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLR 1370
LAA V CA LAA GF+GR T +G+DLGTT+SV+G+N KV II G + PSVV + +G+I+ G DA+ L S P +TIY AKRFIG+ ++D++V E ++H + +L ++ SE F L SG VSP++VGS V++ LL A++LGH+QV+KAV+AVPAKFD+ QR AT +A++ AGL+V+R +EEPTAAA+A+ LH+K N+NHILVYD GGGTLDVS+LFV+ GSV+V +DGDD+LGGSDFD C+ +L K+ + A A E + G S C R ++ +E I++ LT EA C L ++ TS IS+D ++ C LF+RG+ PVTRLL L +T +DIDEVV+VGG TR P ++++LR
Sbjct: 10 LAAAFVVGCAVLAALGFRGRVTTIGVDLGTTFSVVGVNINGKVHIINDSKGHLIFPSVVHYQSNGEILAGYDALPFLTSDPLNTIYNAKRFIGKNWNDSSVIEYGSKHAYTVDKLSHGQSNFSEVGFALS-SGL--IVSPEQVGSQVLKYLLKLTADFLGHNQVNKAVIAVPAKFDSIQRQATGDAYKRAGLKVVRVIEEPTAAAVAYKLHKKSNINHILVYDFGGGTLDVSLLFVSKGSVQVYATDGDDSLGGSDFDMCLYDLLVNKVYSETGQQAHSADEITLPDGIQMSDVCVRSSIRHKAEEIKKKLTYANEAVFTCQLLDTQKTVTST---------------------------------------------ISVD----DFTSTCDHLFQRGLLPVTRLLTELGMTKNDIDEVVLVGGTTRIPKIKQMLR 394
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A7S2PEL7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEL7_9STRA) HSP 1 Score: 311 bits (797), Expect = 7.060e-96 Identity = 203/543 (37.38%), Postives = 283/543 (52.12%), Query Frame = 3
Query: 9 DRGACTPTVRKLQHNL-----IMSKIAVLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINE-----GSKVAIIPGGDGSPLLPSVVSFLEDGK-----------------IVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQT------------GNDLSEAWFELKCSG-----HPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWK--------------------LGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
DR A P + + H L I S ++ + VG A +A GF+GR +V GIDLGTT SV+ + G I G GSPL+PSVVSFL D ++VG DA + ++S STI+ +KRF+GR F D AV+E+ AE EF + G+D F + G P VSP+ +GS+++ L+ ++LG+ V AV+AVPAKFD QR AT +AF+LAG++V R LEEP AAALA+GLHRKPNV+HILVYD GGGTLDVS+L V+DG V+V+ S+GDD LGG+DFD H L +GD+ V AE+ P C + + + E ++ L+ A +C+ L L S +KY L E C P+ L++T+ ++++ +L+ R P+ R+LD L+L D+IDEVVMVGG +R P +RE+++ L V LN IDPD+ VAYG A++
Sbjct: 22 DRHALKPEPKVILHALDTEFKIESLFPIMGVIFVGVLAVMARAGFRGRLSVAGIDLGTTNSVVCVQALSSSVGEIECINDPGTGSPLIPSVVSFLLDKDHKKQFSMLNIDKEKEIDVLVGYDAKQRIDSHAHSTIFHSKRFLGRDFTDEAVTEQQAEVEFDVALDIHNTVMSPSSLDGDDGGGVVFRIPHVGGDSKSDPLLVSPESIGSYIVSYLMKLTQHHLGYDNVKSAVIAVPAKFDMVQRQATAQAFKLAGIKVARVLEEPVAAALAYGLHRKPNVDHILVYDFGGGTLDVSILHVSDGFVDVMASEGDDRLGGADFDAAAAHYLTTADNTNDQHVERLSNALKNVLGVGDEDVEELMAEKCTKT-VEIPLCHNTSFHTIGEKMKIKLSSSNTATEQCLGLGNAFL--SDRKYT-LDEI------------------------------CDALIPVKLEMTKEQFDQSAESLYMRSRLPIRRVLDALELQPDEIDEVVMVGGSSRMPTIREVVKEELRVSSLNTHIDPDITVAYGCASV 530
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A7S3NKF0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKF0_9STRA) HSP 1 Score: 301 bits (772), Expect = 1.950e-93 Identity = 188/487 (38.60%), Postives = 265/487 (54.41%), Query Frame = 3
Query: 54 LIMSKIAVL-AAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGS----------------KVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIY---GAKRFIGRGFDDTAVSEEAAEHEFQLVQTGNDLSEAWFELKCS-GHPPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVNDGSVEVLGSDGDDNLGGSDFDQCVTHVLEWKLGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATE-CMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERE-CMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
++ S I +L + +V CA L+A GF+GR VGIDLGTTYSVI +++ +I +G L PS+V+FLE+GK VG A+ LL+S+ Y AKRFIGR FDD +V+ +A E+ +Q++ G + F++ + GH +V+P+RVG V+R LL A LGH+ ++ AV+AVPA F Q AT +AF+ AGL++ R L EP AAA+A+GL R+P+V H+LVYD GGGTLDVSVL+V DGSVEV+ + GD++LGGSDFD C+ H L L A++ + P CA H L + +E + LTD T C L+ ++ P+S + RS +E + C LF+R + V L + +DDIDEVV+VGG +R P VR ++ L + RLN +IDPDV VA GAA++
Sbjct: 1 MVNSSILILFGSALVAICAVLSALGFRGRVNTVGIDLGTTYSVIAVSDTGFMKRKKKKNAAERYMPSARVIYDENGEALTPSMVAFLENGKTEVGWSALNLLDSQATDARYVIRDAKRFIGRAFDDASVAPQAEEYSYQVIPNGTCAA---FQIDPTRGHGASVTPERVGELVVRRLLQSAQRDLGHTGITTAVIAVPAGFGPNQTRATADAFKAAGLKIARILPEPVAAAVAYGLQRRPDVKHVLVYDFGGGTLDVSVLYVRDGSVEVVANHGDNDLGGSDFDHCIAHALATDLNKTEPITTDAQKQI------PPCAPHVLLRYAEDAKIALTDTERVVTPPCRRLTDDK-------------------------------------------------PVSTTILRSYFESQLCGHLFQRAISVVHSTLKESMIRLDDIDEVVLVGGTSRIPKVRSDIKAALNIKRLNTDIDPDVTVAVGAASV 429
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Match: A0A1Z5JD96_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JD96_FISSO) HSP 1 Score: 299 bits (765), Expect = 8.880e-92 Identity = 193/462 (41.77%), Postives = 260/462 (56.28%), Query Frame = 3
Query: 102 CAALAATGFKGRKTVVGIDLGTTYSVIGINE----GSKVAIIPGGDGSPLLPSVVSFLEDGKIVVGRDAVELLESRPASTIYGAKRFIGRGFDDTAVSEEAAEHEFQLVQTGNDLSEAWFELKCSGH-PPAVSPQRVGSHVIRGLLDRAANYLGHSQVSKAVVAVPAKFDARQRAATVEAFRLAGLQVIRTLEEPTAAALAFGLHRKPNVNHILVYDMGGGTLDVSVLFVN-DGSVEVLGSDGDDNLGGSDFDQCVTH--------VLEWKLGDKVVALEAAEQAVSCGFPSPTCARHNLYQLSESIRRVLTDGREAATECMALSGEELGTSQQKYLRLQEATKISSGAGDRGGLNQESIVPGPSEGAAGHSCGGWEPISLDLTRSEYERECMALFERGVDPVTRLLDRLDLTVDDIDEVVMVGGMTRTPLVRELLRTRLGVDRLNVEIDPDVVVAYGAATI 1445
CA +A GF+GR +V GIDLGTT SVI + + K+ IP G+ ++PSVVSF+ + +VGR A EL+ES P STIY AKR +GR F D +V E EF L + +D S + H ++P +VGS V++ LL YL H V AV+ VPAKFDARQR ATV+AFR AG+ V R LEEP AAALA+GLH K V+ ILVYD GGGTLDVS+L V+ DG V+V+GSDGDD LGG+DFD + H V+E ++ + +E A+ + C P C + + L E ++ L+ AT + Q + L L+ + ++I C PI+L+LT + Y + L +R V P+ RLL L DIDEVVMVGG TR P +R+L++ L ++N IDPD+ VAYGAA++
Sbjct: 54 CAIMAKMGFRGRASVAGIDLGTTNSVICVQQLEKGVGKIECIPDEFGNVIVPSVVSFVSSKETIVGRAAKELIESHPLSTIYQAKRVLGRTFTDPSVQHFQNEVEFVLRENDDDGSVVFHVANHHHHIHQTITPIQVGSKVVKHLLQMTNRYLQHENVKSAVICVPAKFDARQRQATVQAFREAGVSVQRILEEPAAAALAYGLHHKDGVDFILVYDFGGGTLDVSLLQVSGDGFVDVMGSDGDDQLGGADFDSAIAHYWLQQHPSVVE-RVHRHLPHMEYAD--LPCLQEYPLCTASSFHTLGEQLKIQLSSSSINATTSV----------QAQCLGLEH--------------DVDNIA-----------CSSLRPITLELTPAVYAQIVQPLLDRSVAPIHRLLHDFQLQSQDIDEVVMVGGTTRMPQIRQLVQEALLQSKVNTHIDPDITVAYGAASV 477 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1239.1811.1 >prot_F-serratus_M_contig1239.1811.1 ID=prot_F-serratus_M_contig1239.1811.1|Name=mRNA_F-serratus_M_contig1239.1811.1|organism=Fucus serratus male|type=polypeptide|length=465bp MSKIAVLAAVVVGACAALAATGFKGRKTVVGIDLGTTYSVIGINEGSKVAback to top mRNA from alignment at F-serratus_M_contig1239:114241..117927+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1239.1811.1 ID=mRNA_F-serratus_M_contig1239.1811.1|Name=mRNA_F-serratus_M_contig1239.1811.1|organism=Fucus serratus male|type=mRNA|length=3687bp|location=Sequence derived from alignment at F-serratus_M_contig1239:114241..117927+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1239:114241..117927+ >mRNA_F-serratus_M_contig1239.1811.1 ID=mRNA_F-serratus_M_contig1239.1811.1|Name=mRNA_F-serratus_M_contig1239.1811.1|organism=Fucus serratus male|type=CDS|length=2790bp|location=Sequence derived from alignment at F-serratus_M_contig1239:114241..117927+ (Fucus serratus male)back to top |