mRNA_F-serratus_M_contig1239.1809.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: D7FN47_ECTSI (Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN47_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 2.130e-182 Identity = 276/403 (68.49%), Postives = 324/403 (80.40%), Query Frame = 3
Query: 636 HVQVGMSMVDGHNHSEALKHFEITTALDPDLIEAQEALAHTLRDMGSVEEAIRQYKDVMAQGSTDIFTLVQLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPARAPEAYISDLFNLEARKSAFLMS---KKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIFDSVSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRAGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDE-DDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGMNVLGVRTVKGTTRLISPAAGEIVLEAVPQEQKSTIFLCEKSAV 1832
HVQV MS++D HNHSEA+ H E+ TAL PDL +AQE LA+TLRDMGSVEEAIRQYK ++AQ STDI TLVQLG++YHELCDFSQALA YKKARSSP K EMDYLTAALHS S RP+RAP AY++DLF+LE RK+ FL S + +A A D ES G LAEA ++ + GMFYDVHGLIFD V+ N+R+M+EAALGLP D R+G++WLD+LDLGCGRGTMGS+L+ LANF+TGVDLSE AIK A R G YDS++HGD V +MLP+SFDLVVA+D +PYFGDLGD+ + IAAVTR GGLVAFN DALD DD S G N GN RA++LKFTGRWSHRRKYVTQSV AAG++VLGVR VKG TRL+S AAGEIVLEA PQE+++TIFLC K +
Sbjct: 206 HVQVAMSLLDSHNHSEAVGHLELATALVPDLTQAQELLANTLRDMGSVEEAIRQYKSIIAQRSTDIGTLVQLGYAYHELCDFSQALATYKKARSSPTKAAEMDYLTAALHSKSLRPSRAPTAYVADLFDLEVRKNGFLESQAKRTALASAEDSDSSESPGPLAEARRSNGDRGMFYDVHGLIFDRVAPNMRSMIEAALGLPTDGL---GRRGLQWLDILDLGCGRGTMGSELKQLANFITGVDLSERAIKHALREGSYDSIQHGDAIAVVNTMLPNSFDLVVAADMVPYFGDLGDLFRAIAAVTRPGGLVAFNADALDAIDDGSGGANAGGNVRAFDLKFTGRWSHRRKYVTQSVAAAGLSVLGVRVVKGRTRLVSTAAGEIVLEAAPQERRTTIFLCGKGTM 605
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: T0PZH9_SAPDV (Methyltransf_11 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PZH9_SAPDV) HSP 1 Score: 154 bits (390), Expect = 1.460e-36 Identity = 109/404 (26.98%), Postives = 191/404 (47.28%), Query Frame = 3
Query: 636 HVQVGMSMVDGHNHSEALKHFEITTAL---DPDLIEAQEALAHTLRDMGSVEEAIRQYKDVMAQG--STDIFTLVQLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPA-RAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIF-DSVSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRAGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDEDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGMNVLGVRTVKGTTRLISPAAGEIVLEAVPQEQKSTIFLCEKS 1826
H+++ + ++ +AL+ + T+L + + E + H +G ++ A+ K A+ S L +L ++Y E D+ + + + + E Y+ AA H F P RAP Y+S F++ A +S L S D +S F +HGL F D I +++A LG+ D WLD++D G G G + LAN++ G+DLS ++++A R+G+YD L+ GD+ TVT ++ +SFD+V+A ++ PYFGDL V + + R GGL+ N+D LD+++++ Y L+FTGR++H +Y+T+ + V + + AG +V + P+ S ++L K+
Sbjct: 219 HMKLAKAATGLGDYEQALRAYASATSLVSGNALVAEVYYRMGHCASILGRMDVAVSSLKKAAAKAPSSQKSLYLHELAYAYFESGDYEKGNDGLSRLFAMQSMYPEDRYVKAAFHDHGFPPTHRAPTQYVSTTFDMHAHRSVHLAS----------DAFDSFVA-------------FRQLHGLFFVDDAPTRIAEVLQAKLGVTPGD---------HWLDIVDFGTGAGVAVRPFQPLANYILGIDLSAASVELARRSGLYDELQVGDLLTVTATLPTTSFDVVLAMNSAPYFGDLRPVFERAQRLLRVGGLLCINIDQLDDNEAA----------PYTLRFTGRYAHAPEYLTELAAEMHLEVFHHEVLYDVQSVGQSVAGSVVALSHPRTVASDLYLLRKT 580
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A7S4A0L2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0L2_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.010e-33 Identity = 99/284 (34.86%), Postives = 141/284 (49.65%), Query Frame = 3
Query: 891 LAVYKKARSSPAKTVEMDYLTAALHSTSFRPA-----RAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLA------EANKAGSNGGMFYDVHGLIFDS--VSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRAGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDEDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGM 1703
L Y+ A + ++ Y AAL RAP AY+ LF+L AR+ + E+I LA + ++ + +F HGL+FD +++A + +AL + ++ P WLDVL+LGCG G +G LR +AN + VD S +++ A YD L+ GD AT ++ P S DLVVA DA+PY GDLGD+L +A R GGL FN D LD+D S ++ ++LKFTGRW HR KYV G+
Sbjct: 264 LGSYRAAAAMAPAAKDIGYALAALGGAGLAATKEFGYRAPVAYVERLFDLRARRRLLREEDDSWDSTS-----ETIAQLAPNSTDEDDDRPLAKTDLFDHAHGLLFDDRLPKAHVKA-IASALQVNLTESSP-------WLDVLELGCGSGALGPLLRGVANRLHCVDASAVSLEFAASTNTYDDLERGDFATNIRNASPGSVDLVVAVDAVPYVGDLGDLLHAMARALRPGGLAVFNADVLDDDVSMFASDSV--RETFKLKFTGRWQHRVKYVKAQAKGKGL 532
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A7R9YDF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDF8_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.380e-32 Identity = 87/209 (41.63%), Postives = 128/209 (61.24%), Query Frame = 1
Query: 1 MARGALKGLKRTRPSPGEKVVVKGQLAHGSGDRSSQGASLVNAGGADLDSGDLVSWLNCECFFSLVLVGLLAALPFNLHTQELMQSPETYVNRAKEFSGEGSFDKAASLYERAVNTEETAERHSLLAETLVLA--KRKNEALWHFRRAADLYDDHHYKARHGRCVLPIVLQVETLISLGHVQSEEGKPGDAAETFLEILRLQEDEDPDE 621
MARG LK LKRTRPS KG+ + G+ ++ GAS +A A+ + DLVSWLNCEC SL+LVG+LAALPFNL + + + + E +V RA+++ G+ DKAA+LY+RAV+ EETAE H LAETL R ++A+ H+ RAA+LY + + ++ S+G + ++ +P A E++ ++L +D DP E
Sbjct: 5 MARGTLKSLKRTRPSE------KGKASSGTSGVNNSGASANSAANAE-ELDDLVSWLNCECLVSLLLVGVLAALPFNLQSNDFLNTRENFVTRAEDYYKSGALDKAAALYDRAVSVEETAEGHLYLAETLAHPDLNRLHDAIRHYERAAELYHEDEEE------------RIGIWKSVGKLYTDVDRPDLAVESYQKVLDAYDDADPAE 194
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: W4FLV8_9STRA (Methyltransf_11 domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLV8_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.760e-32 Identity = 110/345 (31.88%), Postives = 165/345 (47.83%), Query Frame = 3
Query: 801 KDVMAQGSTDIFTLVQLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPARAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIFDSVSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRAGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALD--EDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGMNVLGVRTVKGTTRLISPAAGEIVLEAVPQEQKSTIFLCEKSA 1829
K AQ S +L + L + + ALA +SP+ E Y+ A+ + R P Y+S LF+L A R SI A ++ + S F +HGL+F+S ++ A++ AAL L G WLDV+D GCG G + RSL++F+ G+D+S +I+ A + +YD L+ GDI V + +S+DLV+A +ALPYFGDL V + + R + AFNVD L +DD V++ A+ L+F+GRW+H Y+ Q V G +L V PA G I +E +S ++L +K A
Sbjct: 273 KGTPAQRSLFTHSLAYAYLEHGMLVEGNHALA---SLFASPSMYTEERYIRASFQDHHYPSGRTPSQYLSQLFDLYAY-------------------RHSI--AAASSSSSSTVDTFRHLHGLLFES---SVPAVMSAALRLRI-----GISDGDHWLDVVDFGCGSGHAMAWFRSLSSFVLGIDVSPMSIENARQLSLYDDLQIGDILDVGGHLPDASYDLVLAINALPYFGDLRQVFELAHRILRPEAIFAFNVDLLPRPDDDEQEHVDD-----AFSLRFSGRWTHNDAYIKQIVQQHGFVLLHEEQVDDDQPFFQPAPGVIQRRPYGKE-RSNVYLVQKLA 579
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A1V9YQC0_9STRA (Methyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQC0_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.990e-31 Identity = 105/392 (26.79%), Postives = 176/392 (44.90%), Query Frame = 3
Query: 672 NHSEALKHFEITTAL---DPDLIEAQEALAHTLRDMGSVEEAIRQYKD--VMAQGSTDIFTLVQLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPA-RAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIF-DSVSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRAGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDEDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGMNVLGVRTVKGTTRLISPAAGEIVLEAVPQEQKSTIFLCEKS 1826
++ +AL+ + + L D + E + H +G ++ A+ K V A S L +L ++Y + D+ + + + + E Y+ AA + +F P RAP YIS +F+L A++S L A + +HGL F ++ I A+++ LG+ D WLDV+D G G G + R+L+N++ G+DLS ++ +A R+ +YD LK GD+ V ++ +FD+V+A + PYFGDL V + + R GGL N D +E S ++ L FTGRW+H+ KY+TQ M V ++ + G++V P +S + L K+
Sbjct: 229 DYEQALRAYTSASTLVSGDAIVAEVHYRMGHCAAILGRMDVAVAALKKAAVKAPPSQKSLYLYELAYAYFQSGDYDRGNDGLDRLFAMQSMYPEDRYMKAAFYDRAFPPLHRAPSQYISTVFDLLAQRSLHL-----------------------APDTADLSAVLRQLHGLFFVEAAPARISALLQDKLGVAPGD---------HWLDVVDFGAGTGAAMTPFRALSNYVLGIDLSAASVDIARRSQLYDELKVGDLIQVAAALTGGTFDVVLAMNTAPYFGDLRQVFEQGHRLLRVGGLFCLNTDQHNEMAES----------SFALGFTGRWAHKTKYITQLAAEYQMEVFHHEVLEDARHVGQSPTGQLVPLVRPTTVRSDVLLLRKT 578
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A024U3B7_9STRA (Methyltransf_25 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3B7_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.670e-30 Identity = 106/358 (29.61%), Postives = 166/358 (46.37%), Query Frame = 3
Query: 768 MGSVEEAIRQYKDVMAQGSTDIFTLV--QLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPARAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIFDSVSLN-IRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATR-AGMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDEDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQSVTAAGMNVLGVRTVKGTTRLISPAAGEIVLEAVPQEQKSTIFLCEKSA 1829
MG + AI +K A+G+T +L L ++Y E +Q +SP+ E Y+ A+ + R+P YI+ LF++ A++ I AN + F +HGL+F+S N I + + +G+ D WLDV+DLGCG G S LRSL+NF+ G+DLS +I+ A MYD L GD V + +S+D+VVA ++LPYFGDL V + + R VAFNVD DD + + + + L+F+GRW H +YV + + G +L V+ ++ A G + + S +++ +K A
Sbjct: 258 MGKLPLAIENFKVAAAKGTTSQKSLFTHSLAYAYLEHGMLAQGNDELAALFASPSMYTEERYIRASFQDHQYPSGRSPTQYIAQLFDIHAQR---------------------ITQPPPANHVDT----FRQLHGLLFESGVPNAIAKALMSKIGISDGD---------HWLDVVDLGCGSGHAMSFLRSLSNFVLGIDLSPLSIENARNLTNMYDDLHVGDFLDVGGGLPDASYDVVVAMNSLPYFGDLRQVFELAHRILRPKAFVAFNVDVRQNDDDN-------DQQDFSLRFSGRWQHSDEYVKRVLERHGFELLHQEQVED-DQVFYQAHGAQIQHRATGKAYSNVYVAQKVA 573
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A485K3E8_9STRA (Aste57867_298 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K3E8_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.210e-29 Identity = 104/364 (28.57%), Postives = 166/364 (45.60%), Query Frame = 3
Query: 621 TRSVPHVQVGMSMVDGHNHSEALKHFEITTALDPDLIEAQEA-----LAHTLRDMGSVEEAIRQYKDVMAQGST---DIFTLVQLGFSYHELCDFSQALAVYKKARSSPAKTVEMDYLTAALHSTSFRPARAPEAYISDLFNLEARKSAFLMSKKGMAQAAKVDGRESIGTLAEANKAGSNGGMFYDVHGLIFDSVSLNIRAMVEAALGLPADDAIPSTRKGMRWLDVLDLGCGRGTMGSQLRSLANFMTGVDLSEEAIKMATRA-GMYDSLKHGDIATVTKSMLPSSFDLVVASDALPYFGDLGDVLQTIAAVTRTGGLVAFNVDALDEDDSSRGVNNSGNARAYELKFTGRWSHRRKYVTQS 1685
T+ + + ++ VD S + + T A D + ++ +A + H MG + AI ++ + + +FT L ++Y E + + +S + E Y+ A+ + RAP YI+ LF+L A + +D I F +HG++F+ + A AAL I G RWLDV+DLGCG G + R L+N++ G+DLS +I+ A R MYD LK GD V+ S+ +FDLV+A + LPYFGDL + + + + R G+ AFNVD L +D GN + + L+F+GRW+H Y+ Q+
Sbjct: 96 TKDLVEAYMKLAKVDTGLRSFSTAYSHYTAASDLIIGDSMQAEVHYRMGHCALVMGKLHLAIDNFRVAKVKATPAQKSLFTH-SLAYAYLEHGMIDRGNGELDQLFASNSMYTEERYIRASFQDHHYSSGRAPSQYIAQLFDLHAHR---------------IDTHTDIDA-------------FRQLHGILFELTAPQATA---AALR-----DIVGISDGDRWLDVVDLGCGSGRAMNYFRPLSNYIIGIDLSPASIENARRLQDMYDDLKVGDFLDVSTSISNLAFDLVLAMNTLPYFGDLRQIFEQVLRLLRPSGVFAFNVDTLQAEDD-------GNDQNFSLRFSGRWNHEVAYIKQA 415
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: A0A7S1UDM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDM5_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.070e-24 Identity = 67/145 (46.21%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 1 MARGALKGLKRTRPSPGEKVVVKGQLAHGSGDRSSQGASLVNAGGADLDSGDLVSWLNCECFFSLVLVGLLAALPFNLHTQELMQSPETYVNRAKEFSGEGSFDKAASLYERAVNTEETAERHSLLAETLVLA--KRKNEALWHF 429
MARG LK LKRTRP G K D D D+VSWLNCEC SL+LVG+LAALPFNL + + + + E +V RA+++ G+FDKAA LY+RAV EET E H LAETL R +EA+ H+
Sbjct: 1 MARGTLKSLKRTRPDKGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DLDDIVSWLNCECLVSLLLVGVLAALPFNLQSNDFLHAREGFVTRAEDYYNSGAFDKAAVLYDRAVALEETPEGHLYLAETLAHPDLNRVHEAIRHY 144
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Match: F0XXG5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG5_AURAN) HSP 1 Score: 106 bits (265), Expect = 3.940e-20 Identity = 63/144 (43.75%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 166 WLNCECFFSLVLVGLLAALPFNLHTQELMQSPETYVNRAKEFSGEGSFDKAASLYERAVNTEETAERHSLLAETLVLAKRKNEALWHFRRAADLYDDHHYKARHGRCVLPIVLQVETLISLGHVQSEEGKPGDAAETFLEILRL 597
+ NCEC FSL LV LLAALPFN++ QS E++V RA+E +G+F AA+LY+RAV+ EET + H LAETLV R +A+ H+ RAA LYDD AR +V L S + E G +A ++ +L L
Sbjct: 33 FFNCECVFSLFLVALLAALPFNINAGYFRQSRESFVMRAEELFSDGAFGTAAALYQRAVDAEETPDGHVFLAETLVRVARVPDAIAHYERAAALYDD----ARE---------RVAALASAARLHVERGSAAEAVAAYVRVLEL 163 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1809.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1239.1809.1 >prot_F-serratus_M_contig1239.1809.1 ID=prot_F-serratus_M_contig1239.1809.1|Name=mRNA_F-serratus_M_contig1239.1809.1|organism=Fucus serratus male|type=polypeptide|length=398bp MSMVDGHNHSEALKHFEITTALDPDLIEAQEALAHTLRDMGSVEEAIRQYback to top mRNA from alignment at F-serratus_M_contig1239:102603..110726+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1239.1809.1 ID=mRNA_F-serratus_M_contig1239.1809.1|Name=mRNA_F-serratus_M_contig1239.1809.1|organism=Fucus serratus male|type=mRNA|length=8124bp|location=Sequence derived from alignment at F-serratus_M_contig1239:102603..110726+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1239:102603..110726+ >mRNA_F-serratus_M_contig1239.1809.1 ID=mRNA_F-serratus_M_contig1239.1809.1|Name=mRNA_F-serratus_M_contig1239.1809.1|organism=Fucus serratus male|type=CDS|length=2388bp|location=Sequence derived from alignment at F-serratus_M_contig1239:102603..110726+ (Fucus serratus male)back to top |