mRNA_F-serratus_M_contig1239.1806.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1239.1806.1
Unique NamemRNA_F-serratus_M_contig1239.1806.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A6H5JBC4_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC4_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 3.780e-119
Identity = 166/218 (76.15%), Postives = 190/218 (87.16%), Query Frame = 2 
Query:  179 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNELMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGSMIPDPPEQKFVPRVFGFRVHPSAANGAYGRGLGRGQGQQHERNLEERR 832
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+ AS+ELMEATCALYGLIHARYVLT +GLEAM+ KY+LQEFGNCPHF+C+ Q VVPLGVRDEPH+ETVKL+CPKCQ+VYVHPSHAAQRVDGAYFGTTFPHLFFMTYG+++PDP ++ FVPRVFGFRVH +A NGA         G  H++ L+ER+
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKRQSVVPLGVRDEPHIETVKLYCPKCQNVYVHPSHAAQRVDGAYFGTTFPHLFFMTYGTLVPDPLDKTFVPRVFGFRVHSTAPNGASA------SGDHHDQRLQERK 213
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: D8LK36_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK36_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 7.970e-93
Identity = 128/165 (77.58%), Postives = 146/165 (88.48%), Query Frame = 2 
Query:  179 SSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNELMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQRVDGAYFGTTFPHLFF 673
            S SSS DGEDTWIQWFC LEGHEMFCE+DR YIED FNLYGLRH+VP INDSLD+ILDR +Q+ AS+ELMEATCALYGLIHARYVLT +GLEAM+ KY+LQEFGNCPHF+C+GQ VVPLGVRDEPH+ETVKL+CPKCQDVYVHPSHAAQ    + FG+++ H  +
Sbjct:    2 SDSSSSDGEDTWIQWFCGLEGHEMFCEIDRGYIEDAFNLYGLRHFVPRINDSLDLILDRTAQNEASHELMEATCALYGLIHARYVLTAAGLEAMYAKYTLQEFGNCPHFLCKGQSVVPLGVRDEPHIETVKLYCPKCQDVYVHPSHAAQ----SEFGSSWHHQLY 162
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A835ZJS8_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS8_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.940e-84
Identity = 118/196 (60.20%), Postives = 152/196 (77.55%), Query Frame = 2 
Query:  182 SSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNELMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVH--PSHAAQRVDGAYFGTTFPHLFFMTYGSMIPDPPEQKFVPRVFGFRVHPSAAN 763
            +SS+ DGED+W+QWFC+L+GHEMFCEVDRSYIEDGFNLYGLR +VP+I + LD+ILDRV    +  +L++++  LYGLIHARY++TT+GLEAM  K+++Q+FG CP  +CR   VVP+G+RDEP +E VKLFCP CQDVY    PS    ++DGAYFGTTF HLF MTY    P   E  +VPR+FGFR+H  A++
Sbjct:    4 TSSTGDGEDSWVQWFCSLQGHEMFCEVDRSYIEDGFNLYGLRQYVPNITECLDIILDRVGPEDSDEDLLQSSYMLYGLIHARYIITTNGLEAMRKKHAMQDFGCCPRMLCRASAVVPIGMRDEPKLEGVKLFCPSCQDVYAPWAPSSPQAQLDGAYFGTTFAHLFCMTYEITAPTAKEL-YVPRIFGFRIHREASS 198
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A448YXJ5_9STRA (Casein kinase II subunit beta n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXJ5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.660e-75
Identity = 119/210 (56.67%), Postives = 149/210 (70.95%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGSMIPDP--PEQKFVPRVFGFRVHPSA 757
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T  GL+AM+ KY+ +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+ +++PDP   +  +VPRVFGFRVH SA
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGPAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPADSAYVPRVFGFRVHMSA 210
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A7R9W3V5_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W3V5_9STRA)

HSP 1 Score: 243 bits (621), Expect = 6.500e-75
Identity = 119/215 (55.35%), Postives = 151/215 (70.23%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGSMIPDPPEQK--FVPRVFGFRVHPSA 757
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T  GL+AM+ KY+ +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+ +++PDP +Q+  +VPRVFGFRVH SA
Sbjct:   73 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAGGSGSVDGAAFGTTFPHLFLMTFNNLVPDPLDQQSAYVPRVFGFRVHQSA 286
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A7S1ZP41_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP41_TRICV)

HSP 1 Score: 243 bits (621), Expect = 6.690e-75
Identity = 119/215 (55.35%), Postives = 149/215 (69.30%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------------VDGAYFGTTFPHLFFMTYGSMIPDP--PEQKFVPRVFGFRVHPSA 757
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T  GL+AM+ KY+ +EFG CP   C GQPV+P+G++DE  ++TVK+FCPKCQ VY HP     R               VDGA FGTTFPHLF MT+ +++PDP  P   +VPRVFGFRVH SA
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLIQCNGQPVLPVGLKDEMGVDTVKIFCPKCQCVY-HPPPIRSRSSHHGPGGSAAGSGAVDGAAFGTTFPHLFLMTFNNLVPDPLDPASAYVPRVFGFRVHQSA 214
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A7S0Y7J2_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y7J2_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.840e-74
Identity = 118/215 (54.88%), Postives = 150/215 (69.77%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR---------VDGAYFGTTFPHLFFMTYGSMIPDP--PEQKFVPRVFGFRVHPSAANGAYG 775
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T+ GL+AM+ KY+ +EFG CP   C GQPV+P G++DE   +TVK+FCPKCQ V+ HP     R         VDGA FGTTFPHLF MT+ +++PDP   +  ++PRVFGFRVH SA   A G
Sbjct:   17 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITSHGLDAMYNKYASKEFGTCPLVQCAGQPVLPCGLKDEMGADTVKIFCPKCQCVF-HPPPVRSRHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPKDSAYIPRVFGFRVHMSARQRASG 230
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A7S0GAP8_9STRA (Casein kinase II subunit beta n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAP8_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.250e-74
Identity = 117/205 (57.07%), Postives = 150/205 (73.17%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGAS-NELMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHAAQR-----VDGAYFGTTFPHLFFMTYGSMIPD--PPEQKFVPRVFGFRVHPSA 757
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    +  ++L ++ C LYGLIHARY++T  GL+AM+ KY+ +EFG CP   C GQPV+P+G+RDE   ++VK+FCPKCQ VY HP +  +R     VDGA FGTTFPHLF MT+ +++PD    +  +VPRVFGFRVH SA
Sbjct:    1 MAYNEESSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRASVSNFSDCLDLILDRIGPDDSDESKLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKEFGTCPLTQCTGQPVLPVGLRDEIGQDSVKIFCPKCQCVY-HPPYGGRRGGSGTVDGASFGTTFPHLFLMTFSNLVPDGLAADATYVPRVFGFRVHHSA 204
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A1E7FEH7_9STRA (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEH7_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.260e-73
Identity = 117/207 (56.52%), Postives = 147/207 (71.01%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP------SH----AAQRVDGAYFGTTFPHLFFMTYGSMIPDPPEQK--FVPRVFGFRVH 748
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T  GL+AM+ KY+ +EFG CP   C GQPV+P+G++DE   +TVK+FCPKCQ VY  P      SH     A  VDGA FGTTFPHLF MT+ +++PDP  Q   ++PRVFGFRVH
Sbjct:    1 MAYNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRTCVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYASKEFGTCPLVQCAGQPVLPVGLKDEMGADTVKIFCPKCQCVYHPPPVRSRSSHHGGAGAAGVDGAAFGTTFPHLFLMTFSNLVPDPLPQDSAYIPRVFGFRVH 207
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BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Match: A0A7S3PD94_9STRA (Casein kinase II subunit beta n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD94_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.640e-73
Identity = 113/202 (55.94%), Postives = 147/202 (72.77%), Query Frame = 2 
Query:  170 MSGSSSSSDDGEDT-WIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVPSINDSLDVILDRVSQHGASNE-LMEATCALYGLIHARYVLTTSGLEAMHTKYSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHP-----SHAAQRVDGAYFGTTFPHLFFMTYGSMIPDP--PEQKFVPRVFGFRVH 748
            M+ +  SS  G D  WIQWFC L+GHEMFCEV+RSYIEDGFNLYGLR  V + +D LD+ILDR+    + +  L ++ C LYGLIHARY++T  GL+AM+ KY+ ++FG CP   C GQPV+P+G++DE  ++TVK+FCPKC  VY  P     ++ +  VDGA FGTTFPHLF MT+ +++PDP   E  +VPRVFGFRVH
Sbjct:   59 MAFNEDSSASGHDEPWIQWFCGLKGHEMFCEVERSYIEDGFNLYGLRACVSNFSDCLDLILDRIGPDDSDDSHLTQSACTLYGLIHARYIITAHGLDAMYNKYAAKDFGTCPLVQCSGQPVLPVGLKDEMGVDTVKIFCPKCTQVYHTPPLRSRANVSTGVDGAAFGTTFPHLFLMTFSNLVPDPLPVESSYVPRVFGFRVH 260
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBC4_9PHAE3.780e-11976.15Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
D8LK36_ECTSI7.970e-9377.58Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A835ZJS8_9STRA2.940e-8460.20Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A448YXJ5_9STRA5.660e-7556.67Casein kinase II subunit beta n=1 Tax=Pseudo-nitzs... [more]
A0A7R9W3V5_9STRA6.500e-7555.35Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A7S1ZP41_TRICV6.690e-7555.35Casein kinase II subunit beta n=1 Tax=Trieres chin... [more]
A0A7S0Y7J2_9STRA1.840e-7454.88Casein kinase II subunit beta (Fragment) n=1 Tax=P... [more]
A0A7S0GAP8_9STRA3.250e-7457.07Casein kinase II subunit beta n=1 Tax=Proboscia in... [more]
A0A1E7FEH7_9STRA1.260e-7356.52Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]
A0A7S3PD94_9STRA2.640e-7355.94Casein kinase II subunit beta n=1 Tax=Amphora coff... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:49395..55933 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.7
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D8LK36
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein kinase regulator activity
EggNOG OGsCOG5041@1,KOG3092@2759
Ec32 ortholog descriptionCasein kinase II, regulatory subunit, beta-sheet
Ec32 orthologEc-06_008020.1
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Exons4
Model size927
Cds size756
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1806.1prot_F-serratus_M_contig1239.1806.1Fucus serratus malepolypeptideF-serratus_M_contig1239 49395..55764 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.643352-CDS-F-serratus_M_contig1239:49394..496931622929160.643352-CDS-F-serratus_M_contig1239:49394..49693Fucus serratus maleCDSF-serratus_M_contig1239 49395..49693 -
1690962729.1468518-CDS-F-serratus_M_contig1239:49394..496931690962729.1468518-CDS-F-serratus_M_contig1239:49394..49693Fucus serratus maleCDSF-serratus_M_contig1239 49395..49693 -
1622929160.6610804-CDS-F-serratus_M_contig1239:50428..505731622929160.6610804-CDS-F-serratus_M_contig1239:50428..50573Fucus serratus maleCDSF-serratus_M_contig1239 50429..50573 -
1690962729.1570096-CDS-F-serratus_M_contig1239:50428..505731690962729.1570096-CDS-F-serratus_M_contig1239:50428..50573Fucus serratus maleCDSF-serratus_M_contig1239 50429..50573 -
1622929160.6766324-CDS-F-serratus_M_contig1239:52088..522101622929160.6766324-CDS-F-serratus_M_contig1239:52088..52210Fucus serratus maleCDSF-serratus_M_contig1239 52089..52210 -
1690962729.1679711-CDS-F-serratus_M_contig1239:52088..522101690962729.1679711-CDS-F-serratus_M_contig1239:52088..52210Fucus serratus maleCDSF-serratus_M_contig1239 52089..52210 -
1622929160.6876032-CDS-F-serratus_M_contig1239:55574..557641622929160.6876032-CDS-F-serratus_M_contig1239:55574..55764Fucus serratus maleCDSF-serratus_M_contig1239 55575..55764 -
1690962729.1758094-CDS-F-serratus_M_contig1239:55574..557641690962729.1758094-CDS-F-serratus_M_contig1239:55574..55764Fucus serratus maleCDSF-serratus_M_contig1239 55575..55764 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.6996486-UTR-F-serratus_M_contig1239:55764..559331622929160.6996486-UTR-F-serratus_M_contig1239:55764..55933Fucus serratus maleUTRF-serratus_M_contig1239 55765..55933 -
1690962729.1835642-UTR-F-serratus_M_contig1239:55764..559331690962729.1835642-UTR-F-serratus_M_contig1239:55764..55933Fucus serratus maleUTRF-serratus_M_contig1239 55765..55933 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1239.1806.1

>prot_F-serratus_M_contig1239.1806.1 ID=prot_F-serratus_M_contig1239.1806.1|Name=mRNA_F-serratus_M_contig1239.1806.1|organism=Fucus serratus male|type=polypeptide|length=252bp
MSGSSSSSDDGEDTWIQWFCALEGHEMFCEVDRSYIEDGFNLYGLRHWVP
SINDSLDVILDRVSQHGASNELMEATCALYGLIHARYVLTTSGLEAMHTK
YSLQEFGNCPHFMCRGQPVVPLGVRDEPHMETVKLFCPKCQDVYVHPSHA
AQRVDGAYFGTTFPHLFFMTYGSMIPDPPEQKFVPRVFGFRVHPSAANGA
YGRGLGRGQGQQHERNLEERRRLRRPPPGASGTPDMTAVASSTAAASAAG
AV
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mRNA from alignment at F-serratus_M_contig1239:49395..55933-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1239.1806.1 ID=mRNA_F-serratus_M_contig1239.1806.1|Name=mRNA_F-serratus_M_contig1239.1806.1|organism=Fucus serratus male|type=mRNA|length=6539bp|location=Sequence derived from alignment at F-serratus_M_contig1239:49395..55933- (Fucus serratus male)
GCCGGGATTACTTGACCAATCAATCGTGGATTATCCGCTTGCAGAAAGAA
TGCAGCTTTTGGCAGTTTTCAGTTTTCTCCCTTGGGAATTAGACAGAAGC
TCGTCGAGGGTCGACGGGGCTGGACGCTAAATTCAGGTGTATAGCGATTA
CCAGAAAGGACGAGGGAGAATGTCGGGGTCTTCTTCAAGCTCGGACGATG
GGGAGGATACTTGGATCCAGTGGTTTTGCGCGCTGGAGGGGCACGAAATG
TTCTGCGAGGTGGATCGCAGCTATATAGAGGATGGTTTTAACCTCTACGG
CCTTAGGCACTGGGTTCCAAGCATCAACGACAGCTTGGATGTTATCCTAG
ATCGAGTATGTGAGTGTGTCGCACCCAGCCTGAGGCATTTGTCTATCTTC
GGAGAGGGGGGAATGGCTTCAGCTAGATTAAGTCAGTAGGGTTTTTCTCC
AGCCTTTCCCTGAAAAGGCCAACCAAGATGATAATTATATGTCCCAATCC
AACCTACACCGTGACATCAAGCCACACAAAGGACAGGACCCCGAGCACTG
TTGGGGCCTACGTCTCATATGCCGCAGGGACGGGAAGGGAGATGTCACCT
TACCAGACGAAATTGCCCGCCACGTTCTGCATATATCTGTGGGTACTTCG
CTTCCCGAAGTCCACGCATTTAAATATGGTAACAAGGGCTTGACTTGACT
TGAAAGGCCCTTGGGCAATTGGCCCATTTTTTATTTTCCCTTCCTCTGGC
TCTCGAGGACTACAGACAAGACAGTGGTGCTGTGGTGCCATGTGACAAAT
TGGCAGGATTGTTTTTCGCCAAGCCATCGCGGCAACGTTTCCTCTATGCA
TCTACATAGAGATATATATAGACTATGTCTACCCTGTTTTGGTCATTCCA
TTCTGCATTTATACGGTTTTCTGATCGATCGTGCCTGAGACTTACTACTG
TTTACGACGGCCCGGGCTGCTGTACTCCCTCTTTCTACACCACTTATAGT
ATATTATAGAAGCAGTAGAGTACAACTACTACTATTCTGTAGAGCTACAG
TAGTAGTACTGATTGTAGTATTGTAGTTATGTATCTCATCACCCTATCCT
GTAGGTGGTACAGACAGCACCTGTACCAGGTATCTATCTGTTAGTTTTAA
TACAAGTACAGTGCGAATCTCTTTCGAAGGACGTTCAAAAGAAGCACATA
CTACCGCTACACAGTGCAAGTTCCACTCGTACGTACGTTTGTGTAATGTT
TCGATTTGAACGCGGCTTAGCAGTTGCCGCGTGTACTCGTACAAATATTT
ACCCGGCGGCGATGTGGCGTTGGACCGTTTCACTTTCGTGGATGGTTTTA
GGATCAAGATGTTTACCTGCCATCCGTCAGTCTTGTACAGTCCAAGCAAT
AGGACACACACATGCGCACAAACAAGTGGTGTGAGCAGTCGTACTCTACA
CGAGCAGCGTGGAGGGGGGGGTGGTGGGGGGGGGGGGGTGCGCTGCCAGA
CTTTTTTTTTTTTTTTGCTGTTCAGCAGACCGCGAGCGGGACTGGCCACC
GTGTAAAGTAGTTTTTTCGGGCTGGCAACCAATACGCTGAATGTGAGAAA
CAACAATGCTGTATGTTCTTGGTGCGTTGTACTCCCGTGCTTTACTCTGC
TTTAGTGTACATTTCCTACGCAAGTGATGAAGCGTGTAATCGCACCGTAA
CTTGACGTGCATTTGGTGATGGGCTTCCATACTGTCTCCAAGCCTGAGAC
GAGAGACGAGGTCTGCCTCTAGGCACCATTATGATCCTTGCGTATGATGG
AGCGTTGCAGCTGTCAGCCGCAGCAGCAGCCCAATCTGACGTGATGACAC
GGCCAGCCAGTCCATTGCACGAGTAGTCTAACAATAGTGGTTCTGAATTG
ATGTCGATAGCCTCCGATACTTTCTGCATCACACATGTCCACTACAACCA
ATAGTCGGCGTGGGAAAAGAGAGGCGCACATTGATTGGCCCATGGTGAGA
CCTGAAAAGGCGGCACCCGTTACCGGAACTTTCTTGAGGACGTCTGGCCT
TGTGCCGGCGGACTCTCGGCAATGAACGTCATCGGTACGCAATTGCGTGA
CCTGATAGACTAAGGATTAACACCCGATGACGGTTGGCGATGTATATAAA
TGGACGCCGCCGCAGATCCCGTGAGTAAGCACCAGATTCAGCCTGAGTAT
GGAGATGAGCGGGCTGACGCGGGAAGGGACGGCTGAACCCGTTTCGCGAG
GCCAAATCTTCAGGCACGCACGGAAACAGAGGGATATTCATTTTCCCTGT
CCAGCTGATCCCGAGCAGGATTGGCAACCTCACCAGGTTGACCCATACTC
TACTTTAAGTCATAACCGTGCGTATGTAGCGGACACCCCAAACCCCACCC
AGACAGCTAGATACAGTAGGTGTATGTATAAATTGATGTATGGTCATCAC
ATATAGCAAGAGTATGGATCAACCAGGCAAGGTTGCCAGTCCTGCTCGTG
GTCAGCTGAACAGAGAAAATTAATATTCCTTTGCTCCCGTTCGTCTCTGA
GAATTTGGTCTCGCGAGACGGGTTCAGCCGTCCCTTCCCGCGTCAGCCTA
GTCATCTCATACTCAGGCTGAATCTGGTGCTTACTCACGAGATTCCTCCC
GATTTCCGCGGCAGCGTCCATATTTTTATTTAAACCGCCAAACGCCATCG
GATCAATCCCGAGTTCATCGGGTCACGCAATTGCGTACCTATAGCGTTCA
CTGCCGAGAGTCCGCCGGCACAGGACCAGTAGTCCTCAAGTTAGTTCCAG
TAACGGGTGCTGCCATTTTGCAGGTCACCATGGACTATGACCAATTAATG
TGCGCCTCTCTTTTCCCACACCCGCTATTGGTATGAAGTGGGCATGTTGA
TAGAAGGCTAGGCTGTAATCACGAGCATGAAATTATGATCACCACCCTTT
TGTTTTGTACAGTATTGACATGCACTATTAATAAGATAGACTATTAACAC
ATCCACGGTTCCGAGGCCTCGCCGTACATGGCCTTGTTGTTCTACCCAAG
GCAACACGAGCATTCACTACCAGTGAAGACTACTGCTGGAGTTTGCGTTG
AAAAGCTACAACAGTAGAGTATCCTGGTTGTTTCCTCCCCGTGTTCGACT
ATTATAGACTACAAATAAAGCTACAGTTACAGGATACTGGTACACAGTCT
TTTGGAAATACTCTTGAAATTTCTTTCAATGCCATTACTTAATGTTTTGT
ACGATAATAACATTACGCACTATTTTAGTAATGTACCAGCCGAGGTCACA
CAGGAGGAAGGTCACACAGGATTTCTCCACCTTTCTTCTGCGGTGCTTGC
CTTAATTTTTCTCGCAAGAAGGATTCAGCCGCTCCTTTCCCTCGTCGACC
GTGAAGTCGAATATTGTGTACTCACGATTTCATCGCTCTACATTCGTTGG
GATCATTTTTCCTTTTTCTTTATTGAAGGAAAAATCCCAGTTCGTGTAAC
GACATCAAGATTCGAACTCACGTCCCAACGTCAGAAGGTTTCGAGGTTAC
GAACTGAACCACCGCAGCAACCAACACCCTTGATCCACGGTGCTCTTTCT
CCACCGAATGTCCCATGTCTCGATTCATTCCCCTTTCGATTCATTTCCAT
TTGTCCCAGAACCTCGGCCTCGTCCGAAAACTGACCCTTGATCCTACTAT
AATATTAATAACCTCAACTGCAGCTCAACACGGAGCGAGCAACGAGCTGA
TGGAGGCGACATGCGCGCTGTACGGTCTAATCCATGCGCGTTACGTGCTG
ACGACCAGTGGACTGGAGGCCATGCACACCAAGTACAGTCTTCAGGTGAG
ACAACTTGGTCACTTTGACAAACATATGCTTCTTCCTCCTGTGTCCTGGT
CACCGCGGGGCCATGGCTAAGTTCATGTACGAGGAGCATCTGTGTTTCGT
AGCCCTGACAAGTATTGAGCGCAGGAACCCAGTTCTTTCCGCTTACCTCT
TACTTCCTTGTGTGATCTCCCACAGCTCTTCGGCTATTTCCAGGTGTCCT
GTACTTTCTGGATTATGAAGATAATCTACATCATCACGGTCCTCTGTTCG
CGTTTCAATGTTGTACCGGATTCGTCTTTGTTTGATGATGCACTGTTTTG
TCTTGGCTGTTTTTCTGGTGTCCCTGCATGGCGATTAATGTAAGTGTAGA
GTATAACGGTGGGTTTCTCCGCGATATTATACTGTTGACCCAACGTTACC
ACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATTTGCAGC
CTTTGATCCGACCTATTAATAAACGTTTAACGTTTTGATATTTTTTCCCC
CGGACTGGGGTATACAGTATACAGTATACAGTATACAGTATGCTCAGAAG
GAGAAGGTCTAGTTTCTTCAAAAATTGACCGCGGTCTGACAGATCGACCG
AACGCAGTCTCGATCCACACTAACTATTAATACACTATCCACGCTCAATT
AGAGCTCGAAGGACGAGATGATGTTGTATTTTGTACCAACGACGGTGCTT
CTAGAGCTAATATAATTTATGATATTAGACTAGTCGCAGGATAGCTTATT
ATTATAATAGATAGCTTCAGCATTTTTGTTACTGTCCGCTCGCAGCGGTA
AGTTCTCAGGCTGCTCCCAGCGGTAAATCTCGGGCTGCCTAAAAGCCTAT
GGAATAGCACAACCTCTGAAGCCATCCTTTGATGCAAGCACCCGCGTCTT
CCTCTGTGAAGGCCCTCACGCATCACACATCAAGGACCACCGAACCCGGA
TTTCTATCCGTGGCACTTTTGTCTGCCGTCTTAAAGCCAGAATTCGCCAA
GATCGCCACTTTATAGTGGAATAAAGATCGCTGCCTTCTCAGAAGAGTTA
CATACGTCAATGGCGTGTTTTCGAGAGCGCGTCTGTCTCGCGTCGTGTGC
CGTGTCGATAATGGTACTTTTTATACCGCTATTTTATACCATACCATACC
ATACCGTACGAATACGACTATATTAGTATTAATAGGTCATCGCGGTTGTC
AAGTTTCATGTTCACTGTACCATTCTGGTCTACTACAGTAAAACCACTGT
ACTAATCGACGAGCAGTTGTCACGCATCCGTTAGGCCGTGAATGTACTGT
ACTGTTACACTATTAATACTTTATACTGGTACGAAGTACTGTTCCTATCA
TAGTGTATTGTATTGCTTTTACTGTAAATACTTTTATTTGTGTGTGTGAT
GTTCTATTAATATATTAATATAATAATAAGCTATTAATATTATTAGAGCT
ATCGATACTATACTATACTTACAGCCTTATCGCATACCGATCGCTGCTGC
ATCAACTCAGGAGTTTGGCAACTGTCCGCACTTCATGTGCCGGGGACAGC
CTGTGGTTCCTCTGGGCGTGCGAGACGAGCCGCACATGGAGACCGTCAAG
CTCTTCTGTCCCAAGTGCCAGGACGTGTACGTGCACCCTTCGCACGCGGC
GCAAAGTAAGTTTGGCGTGTCAGACGTGAGACGGCGTGTCTGTCCTATAA
AGGGTTCCAGCTCCAGCAACTGAACTGAATAACAAGTATTATTTTTATTT
TTGGACTGAGGACGAGGCCGAGTTTCCAGCAGCGTGGCTATTGAAGGTGC
TCGTATGGAATGCGTTGTGTATTCGTGATCTACCGGTATCGTTGTGTATT
GTGTAGTGTATAGTATCGTCCTTTGAGGTCGTAGTACAGACAGCCAATGT
TCCCACCTAAACCTTGATTATAAGGTTTAGATGCGTTCAGATTTCTATTT
AAACAGTAGCACGCGCTAAGCCGCCCCCTCTTTAAACAAGAGTTTCGCCA
AAGGTAATGGTAAGCCTTAGAGAGATGGCCGTAGGACAGCGGTAGATGTG
ACTATTAATAACAAGCAACAGGTTCGGAATCGCCCTGTCAGCGGATGCCG
GGAATATAATGTGAAGCTACTTCTTCAATCGGCTACTCTAGAACGCATTC
GTGACTAACGTTTGGCGCGTTTGCAAAGAACAGTACGTTCAGAAGTCGAC
CCCCCCCCCCGTCGAGGTGCTTTCTGTTTCATCTGCCAGGGGAGGGAAAT
AGAGCTTTCCACAATGTATGGTTGTCGAGTGTGTTCCACCCCGCCCTTTT
TTTTTGTTTGTTGTTGTAAAGTAACCACCCTATTCATACACTTGTTACCT
CCTCTTATTTCTTGGCGTACTCTGATATCGTCGTGCCCAGGGGTCGACGG
CGCCTACTTTGGGACAACGTTCCCACACCTCTTCTTCATGACCTACGGAT
CCATGATACCCGACCCGCCAGAGCAGAAGTTCGTGCCGCGCGTGTTCGGC
TTCCGCGTCCACCCTTCCGCCGCGAACGGGGCCTACGGCAGAGGTTTAGG
CAGAGGTCAAGGCCAGCAGCACGAGCGGAACCTCGAAGAGCGGAGACGAC
TCAGGCGGCCGCCACCGGGAGCGTCGGGTACACCGGATATGACAGCAGTT
GCATCATCAACAGCAGCGGCTTCAGCAGCAGGGGCGGTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1239:49395..55933-

>mRNA_F-serratus_M_contig1239.1806.1 ID=mRNA_F-serratus_M_contig1239.1806.1|Name=mRNA_F-serratus_M_contig1239.1806.1|organism=Fucus serratus male|type=CDS|length=1512bp|location=Sequence derived from alignment at F-serratus_M_contig1239:49395..55933- (Fucus serratus male)
ATGTCGGGGTCTTCTTCAAGCTCGGACGATGGGGAGGATACTTGGATCCA
GTGGTTTTGCGCGCTGGAGGGGCACGAAATGTTCTGCGAGGTGGATCGCA
GCTATATAGAGGATGGTTTTAACCTCTACGGCCTTAGGCACTGGGTTCCA
AGCATCAACGACAGCTTGGATGTTATCCTAGATCGAGTATATGTCGGGGT
CTTCTTCAAGCTCGGACGATGGGGAGGATACTTGGATCCAGTGGTTTTGC
GCGCTGGAGGGGCACGAAATGTTCTGCGAGGTGGATCGCAGCTATATAGA
GGATGGTTTTAACCTCTACGGCCTTAGGCACTGGGTTCCAAGCATCAACG
ACAGCTTGGATGTTATCCTAGATCGAGTATCTCAACACGGAGCGAGCAAC
GAGCTGATGGAGGCGACATGCGCGCTGTACGGTCTAATCCATGCGCGTTA
CGTGCTGACGACCAGTGGACTGGAGGCCATGCACACCAAGTACAGTCTTC
AGCTCAACACGGAGCGAGCAACGAGCTGATGGAGGCGACATGCGCGCTGT
ACGGTCTAATCCATGCGCGTTACGTGCTGACGACCAGTGGACTGGAGGCC
ATGCACACCAAGTACAGTCTTCAGGAGTTTGGCAACTGTCCGCACTTCAT
GTGCCGGGGACAGCCTGTGGTTCCTCTGGGCGTGCGAGACGAGCCGCACA
TGGAGACCGTCAAGCTCTTCTGTCCCAAGTGCCAGGACGTGTACGTGCAC
CCTTCGCACGCGGCGCAAAGAGTTTGGCAACTGTCCGCACTTCATGTGCC
GGGGACAGCCTGTGGTTCCTCTGGGCGTGCGAGACGAGCCGCACATGGAG
ACCGTCAAGCTCTTCTGTCCCAAGTGCCAGGACGTGTACGTGCACCCTTC
GCACGCGGCGCAAAGGGTCGACGGCGCCTACTTTGGGACAACGTTCCCAC
ACCTCTTCTTCATGACCTACGGATCCATGATACCCGACCCGCCAGAGCAG
AAGTTCGTGCCGCGCGTGTTCGGCTTCCGCGTCCACCCTTCCGCCGCGAA
CGGGGCCTACGGCAGAGGTTTAGGCAGAGGTCAAGGCCAGCAGCACGAGC
GGAACCTCGAAGAGCGGAGACGACTCAGGCGGCCGCCACCGGGAGCGTCG
GGTACACCGGATATGACAGCAGTTGCATCATCAACAGCAGCGGCTTCAGC
AGCAGGGGCGGTGGGGTCGACGGCGCCTACTTTGGGACAACGTTCCCACA
CCTCTTCTTCATGACCTACGGATCCATGATACCCGACCCGCCAGAGCAGA
AGTTCGTGCCGCGCGTGTTCGGCTTCCGCGTCCACCCTTCCGCCGCGAAC
GGGGCCTACGGCAGAGGTTTAGGCAGAGGTCAAGGCCAGCAGCACGAGCG
GAACCTCGAAGAGCGGAGACGACTCAGGCGGCCGCCACCGGGAGCGTCGG
GTACACCGGATATGACAGCAGTTGCATCATCAACAGCAGCGGCTTCAGCA
GCAGGGGCGGTG
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