mRNA_F-serratus_M_contig1239.1804.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1239.1804.1
Unique NamemRNA_F-serratus_M_contig1239.1804.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A6H5JCU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 4.340e-112
Identity = 184/304 (60.53%), Postives = 222/304 (73.03%), Query Frame = 3 
Query:   72 LHSKINSVFSSLCRVGVLLAV-GLVLLSDGAYAFIGSTSFSRFTPL--------GRNHALPAEQDAVAQHLPMPSTVKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGVGEGAREKLGGV-GVEMSVANFLDNRLSSTLGL 953
            +HS     + + CR  + ++V  L  L D A AF         T          G + A+ AE  A  Q   +P+TVKGILFDMDGTLTDSD+LHFEAYR+TFLKVTP FNGG  I+R+YYD+WMSGNSN AIVE LFP+ L E+QTALWK+KEE+YRKIST MTPLPGLL FLD C+  GLAMI+VTNAPRLDA HTL +L L DR       F +TMVIG ECARAKPHPDPY+EGLSRLGL A+ C+AFEDSVNG +SAVSAGL+T GVGEG++E+L GV G  + V+++LD+RL + LG+
Sbjct:   23 MHSAAGRAWLNPCRTALFVSVFALAALCDIASAFFSPPVRLLTTXXXXXXXXXXGNSGAVSAESGATNQFPSLPATVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDR-------FEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGV 319
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: D8LK30_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 1.500e-99
Identity = 153/221 (69.23%), Postives = 182/221 (82.35%), Query Frame = 3 
Query:  294 MDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGVGEGAREKLGGV-GVEMSVANFLDNRLSSTLGL 953
            MDGTLTDSD+LHFEAYR+TFLK+TP FNGG  I+R+YYD+WMSGNSN AIVE LFP+ L E+QTALWK+KEE+YRKIST MT LPGLL FLD C+  GLAMI+VTNAPRLDA HTL +L L DR       F +TMVIG EC RAKPHPDPY+EGLSRL L A+ C+AFEDSVNG +SAVSAGL+T GVGEG++E+L GV G  + V+++LD+RL + LG+
Sbjct:    1 MDGTLTDSDTLHFEAYRETFLKLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDR-------FEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGV 214
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A835ZE39_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.180e-84
Identity = 144/254 (56.69%), Postives = 171/254 (67.32%), Query Frame = 3 
Query:  210 RNHALPAEQDAV-AQHLPMPSTVKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTKMTPLPGLLAFLDRCR-----RAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGVGEGAREK-LGGVGVEMSVANFLDNRLSSTLG 950
            R HA  A   A  A   P P+ +KG LFDMDGTL DSD LHFEAYRD  L++ PD NGG PI + +Y EWMSGNSNA I   LFPD    +Q  +W  KE LYR+IST M PLPGL   L+ C      +A +A IIVTNAPRLDA HT++VL +++R       FG T+VIG ECARAKPHP+PY+EGL RLGL A DCIAFEDS+NG  SA +AGLFT+GV  G  E  L G G  + +A+F D RL + LG
Sbjct:   43 RLHATDAAATATEAPAQPSPAHIKGCLFDMDGTLVDSDELHFEAYRDIILEMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRRISTAMAPLPGLARLLEWCDLEDDDKARIATIIVTNAPRLDARHTMEVLGIHER-------FGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALLG 289
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: W7TRE2_9STRA (Had family hydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRE2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.810e-56
Identity = 100/196 (51.02%), Postives = 131/196 (66.84%), Query Frame = 3 
Query:  273 VKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGV 860
            +KGI FDMDGTLT+SD LHFE YRDT LK  P++N G P+ R +YD+ +SG++N  IV  L P   ++    LW +KE LYR+ S  ++PLPG++  LD C    +  ++VTNAPR++  HTL  L L DR   S+I      +IG E AR KP PD Y EGL RLGL A++CIAFEDS +G  SAV+AG+ T+ V
Sbjct:   72 IKGICFDMDGTLTNSDDLHFETYRDTLLKFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRERSANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKI------IIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAV 261
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A6U0VYW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.450e-54
Identity = 116/240 (48.33%), Postives = 145/240 (60.42%), Query Frame = 3 
Query:  246 AQHLPMPST---VKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKI-STKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGV--GEGAREKLGGVGVEMSVANFLDNRLSSTL 947
            A  L +P T   ++GILFDMDGTLTDSDS+HFEAY+ T  ++ P+      ITR++YD+ MSG SN  IV  + PD   E+Q  +W  KEE YR++ S  M    GL AFL  C    L  I+VTNAPR DA HTL +L L+ R       F K +VIG EC  AKP P+PY+EGL +LGL A  CIAFEDS +GA SA++A L T+ V       E +   G  M V  F D RL  +L
Sbjct:  148 AAELRVPRTDVPLRGILFDMDGTLTDSDSVHFEAYKATLARLAPEL---PEITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGR-------FAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A2V3J516_9FLOR (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J516_9FLOR)

HSP 1 Score: 178 bits (451), Expect = 1.440e-50
Identity = 97/246 (39.43%), Postives = 141/246 (57.32%), Query Frame = 3 
Query:  216 HALPAEQDAVAQHLPMPSTVKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTK-MTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGV-GEGAREKLGGVGVEMSVANFLDNRLSSTL 947
            H +P E         +  T+K ILFD+DGT  +SD +H+E YRDT L++ P FNGG PITR++YD  MSG  N  +V  + P     EQT LW++KE  Y  + +K ++P+ GL+  + RC++ G+   IVTNAP+     T+  + + +        FG  +V+  EC   KPHP PY+  L   G+ A++ IAFEDS +G  SA+ AGL TIG+    + E L   G   +V ++ D +L S L
Sbjct:    7 HTMPPES--------IEGTLKAILFDLDGTCLNSDHIHYECYRDTLLELIPSFNGGKPITREFYDSEMSGRQNPELVSKILPQLPLHEQTRLWQTKESRYEDVISKGVSPIAGLIELIKRCKQDGIITYIVTNAPKGTCVKTVSSIGITEY-------FGSHVVVAEECEYPKPHPAPYLRALELAGVSAKEAIAFEDSPSGTRSAIGAGLLTIGMRSTQSDETLRSFGAAFTVRDYNDPKLLSAL 237
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A1X6NWD3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM)

HSP 1 Score: 176 bits (447), Expect = 1.850e-49
Identity = 105/245 (42.86%), Postives = 143/245 (58.37%), Query Frame = 3 
Query:  234 QDAVAQHLPMPS---TVKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELY-RKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGVGEG-AREKLGGVGVEMSVANFLDNRLSSTLGL 953
            +DA+A   P+ +   T+  +LFDMDGTL   D  HFEAY DT L++ P FNGG  ITR++Y+  MSG  N  +++ + PD   E    +  +KE  Y R+ +  +  L G  A LD    AG+ + +VTNAPR   EHTL    L DR  V        +++G ECARAKP PDPY++G   L ++  + IAFEDS +G TSAV+AGL TIGVG G     L   G    + ++ D RL++ LGL
Sbjct:   32 RDAMAGSPPISTQGGTLSAVLFDMDGTLVAGDDHHFEAYADTLLEMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRFPV--------VIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGL 268
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: K8EPS2_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPS2_9CHLO)

HSP 1 Score: 158 bits (400), Expect = 1.310e-42
Identity = 94/227 (41.41%), Postives = 136/227 (59.91%), Query Frame = 3 
Query:  261 MPSTVKGILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGT-PITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKIS-TKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLE----AEDCIAFEDSVNGATSAVSAGLFTIGVGEGAR-EKLGGVGVEMSVANF 920
            +PS  K  LFD+DGTL DSD +HFE +++  +KV    N    PI  D++ + ++G SN  I   L+PD  +EE+  +W  KE+ YR+ + T +  L GL   + +     +  I VTNAPR +A+  L+ L L       ++ F + +V+G EC  AKPHP PY++GL  LGL+    A+DCI FEDS +GAT+AV+AG F +GV    + E L  VGV M+V +F
Sbjct:   43 LPSNPKAFLFDIDGTLCDSDPVHFECFQELIMKVPSVKNPSRKPIDHDFFRKHIAGGSNPIIFNNLYPDLSEEERERMWTEKEKEYRRRAITSLRRLNGLSELMSQIDAEKIPKIAVTNAPRENADMMLKALQL-------DVWFKELVVLGGECEHAKPHPQPYIDGLRLLGLDPIEDAKDCIVFEDSPSGATAAVAAGCFVVGVMTSQKAEHLLEVGVHMTVKDF 262
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: C1FHX1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHX1_MICCC)

HSP 1 Score: 156 bits (395), Expect = 4.180e-42
Identity = 98/232 (42.24%), Postives = 135/232 (58.19%), Query Frame = 3 
Query:  285 LFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKIS-TKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLG-LEAEDCIAFEDSVNGATSAVSAGLFTIGVGEGAREK-LGGVGVEMSVANFLDNRLSSTL-GLGDLED 968
            LFDMDGTL D+D LH E + +  L      NGG PI  D++ + ++G +N  I   L+P+    E+ A+W+ KEE +R ++ TK+  LPGL   L      G+  + VTNAPR +AE  L  L L         G+ + +VIG EC +AKPHPDPY+EG+  +G ++A  C+AFEDS  GA +AV+AG+ T+GV        L GVGV + V NF + RL   L   G  ED
Sbjct:   30 LFDMDGTLCDTDPLHHEVFSNLLLAHGK--NGGVPIDDDFFHKHIAGRTNEDIFADLWPELSVPEREAMWEKKEEDFRALAATKLRRLPGLTELLAWIDARGIRKVAVTNAPRPNAELMLTSLGLD--------GYFEHVVIGTECTKAKPHPDPYLEGMRLVGAVDASRCVAFEDSPAGAAAAVAAGIPTVGVTTSQPSSALEGVGVSLCVKNFAEERLMLALESRGSRED 251
[Close]
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Match: A0A5E6QD40_PSEFL (Phosphorylated carbohydrates phosphatase n=5 Tax=Pseudomonas TaxID=286 RepID=A0A5E6QD40_PSEFL)

HSP 1 Score: 155 bits (392), Expect = 4.200e-42
Identity = 89/219 (40.64%), Postives = 132/219 (60.27%), Query Frame = 3 
Query:  282 ILFDMDGTLTDSDSLHFEAYRDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTALWKSKEELYRKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTLQVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDCIAFEDSVNGATSAVSAGLFTIGVGEG-AREKLGGVGVEMSVANFLDNRL 935
            +LFD+DGTLTD+D+LH +A+R    +       G  +T+  +DE +SG +N  +   LFPD+   ++ AL + KE L+R+++ ++ PLPGLL  LD  +   + M +VTNAPRL+AEH L  + L  R       F + +V   E ARAKP P PY+ GL RL   AE  +AFEDS+ G T+A +AG+FT+ +      E+L   G ++ + +F D RL
Sbjct:    5 LLFDLDGTLTDTDTLHLQAFRQLLHE-----QDGRELTQAQFDEQISGQANGELFARLFPDQSPAQRQALAERKEALFRELAPELQPLPGLLRLLDYAQAEAIGMCVVTNAPRLNAEHMLGAMGLTQR-------FTQVLVAD-ELARAKPDPLPYLTGLERLQANAEHALAFEDSLPGVTAASAAGIFTVAIATTQTAERLQQAGAQLVIDDFNDPRL 210
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1239.1804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCU9_9PHAE4.340e-11260.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK30_ECTSI1.500e-9969.23Haloacid dehalogenase-like hydrolase family protei... [more]
A0A835ZE39_9STRA1.180e-8456.69HAD-like domain-containing protein n=1 Tax=Tribone... [more]
W7TRE2_9STRA1.810e-5651.02Had family hydrolase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6U0VYW9_9STRA1.450e-5448.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2V3J516_9FLOR1.440e-5039.43Haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A1X6NWD3_PORUM1.850e-4942.86Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
K8EPS2_9CHLO1.310e-4241.41Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
C1FHX1_MICCC4.180e-4242.24Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A5E6QD40_PSEFL4.200e-4240.64Phosphorylated carbohydrates phosphatase n=5 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1239contigF-serratus_M_contig1239:19767..30554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.4
Seed ortholog evalue2.9e-80
Seed eggNOG ortholog2880.D8LK30
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050308,GO:0050309,GO:0071944
EggNOG free text desc.pseudouridine 5'-phosphatase activity
EggNOG OGsCOG0637@1,KOG2914@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1074
Cds size930
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1239.1804.1prot_F-serratus_M_contig1239.1804.1Fucus serratus malepolypeptideF-serratus_M_contig1239 19870..30513 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.1109304-UTR-F-serratus_M_contig1239:19766..198691622929160.1109304-UTR-F-serratus_M_contig1239:19766..19869Fucus serratus maleUTRF-serratus_M_contig1239 19767..19869 -
1690962728.9201658-UTR-F-serratus_M_contig1239:19766..198691690962728.9201658-UTR-F-serratus_M_contig1239:19766..19869Fucus serratus maleUTRF-serratus_M_contig1239 19767..19869 -
1622929160.1987407-UTR-F-serratus_M_contig1239:30513..305541622929160.1987407-UTR-F-serratus_M_contig1239:30513..30554Fucus serratus maleUTRF-serratus_M_contig1239 30514..30554 -
1690962728.963771-UTR-F-serratus_M_contig1239:30513..305541690962728.963771-UTR-F-serratus_M_contig1239:30513..30554Fucus serratus maleUTRF-serratus_M_contig1239 30514..30554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.1259549-CDS-F-serratus_M_contig1239:19869..201551622929160.1259549-CDS-F-serratus_M_contig1239:19869..20155Fucus serratus maleCDSF-serratus_M_contig1239 19870..20155 -
1690962728.9304664-CDS-F-serratus_M_contig1239:19869..201551690962728.9304664-CDS-F-serratus_M_contig1239:19869..20155Fucus serratus maleCDSF-serratus_M_contig1239 19870..20155 -
1622929160.1425633-CDS-F-serratus_M_contig1239:20720..209611622929160.1425633-CDS-F-serratus_M_contig1239:20720..20961Fucus serratus maleCDSF-serratus_M_contig1239 20721..20961 -
1690962728.9391613-CDS-F-serratus_M_contig1239:20720..209611690962728.9391613-CDS-F-serratus_M_contig1239:20720..20961Fucus serratus maleCDSF-serratus_M_contig1239 20721..20961 -
1622929160.1579518-CDS-F-serratus_M_contig1239:22613..226981622929160.1579518-CDS-F-serratus_M_contig1239:22613..22698Fucus serratus maleCDSF-serratus_M_contig1239 22614..22698 -
1690962728.9475658-CDS-F-serratus_M_contig1239:22613..226981690962728.9475658-CDS-F-serratus_M_contig1239:22613..22698Fucus serratus maleCDSF-serratus_M_contig1239 22614..22698 -
1622929160.177761-CDS-F-serratus_M_contig1239:30195..305131622929160.177761-CDS-F-serratus_M_contig1239:30195..30513Fucus serratus maleCDSF-serratus_M_contig1239 30196..30513 -
1690962728.9556723-CDS-F-serratus_M_contig1239:30195..305131690962728.9556723-CDS-F-serratus_M_contig1239:30195..30513Fucus serratus maleCDSF-serratus_M_contig1239 30196..30513 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1239.1804.1

>prot_F-serratus_M_contig1239.1804.1 ID=prot_F-serratus_M_contig1239.1804.1|Name=mRNA_F-serratus_M_contig1239.1804.1|organism=Fucus serratus male|type=polypeptide|length=310bp
MTHTYNLPVLLHSKINSVFSSLCRVGVLLAVGLVLLSDGAYAFIGSTSFS
RFTPLGRNHALPAEQDAVAQHLPMPSTVKGILFDMDGTLTDSDSLHFEAY
RDTFLKVTPDFNGGTPITRDYYDEWMSGNSNAAIVETLFPDKLKEEQTAL
WKSKEELYRKISTKMTPLPGLLAFLDRCRRAGLAMIIVTNAPRLDAEHTL
QVLDLYDRQDVSEIGFGKTMVIGCECARAKPHPDPYMEGLSRLGLEAEDC
IAFEDSVNGATSAVSAGLFTIGVGEGAREKLGGVGVEMSVANFLDNRLSS
TLGLGDLED*
back to top

mRNA from alignment at F-serratus_M_contig1239:19767..30554-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1239.1804.1 ID=mRNA_F-serratus_M_contig1239.1804.1|Name=mRNA_F-serratus_M_contig1239.1804.1|organism=Fucus serratus male|type=mRNA|length=10788bp|location=Sequence derived from alignment at F-serratus_M_contig1239:19767..30554- (Fucus serratus male)
GGTTTTTTGACATACAGGTAGGGTTGACAGCACAGCAGGGTATGACTCAC
ACCTACAATCTTCCAGTCTTGCTACACTCCAAGATCAACAGTGTCTTCTC
ATCTCTATGCCGCGTTGGCGTCCTCCTCGCCGTCGGGCTTGTACTTCTCA
GTGACGGAGCCTACGCTTTCATTGGAAGCACGAGTTTCTCACGATTCACG
CCGCTTGGAAGAAATCACGCTCTGCCGGCTGAGCAAGACGCGGTTGCGCA
GCACCTGCCCATGCCGTCGACCGTCAAGGGTATACTTTTCGACATGGATG
GAACTCTTACAGACAGTGACAGCTTGCACTTCGAGGCCTATCGTGATACA
TTCCTCAAGGTATGCACAAACAACCCTAAGCAGCCCGAGTTGCACTCATT
TTCCACAGAGACGAAGAGGGAAGAGGGGTGCTATCTTGACATGTTCGATC
GTCGCCCTCAGATATGCCACGAAACGCTGCTGAAAGATTTCAAACAGACA
AGTCAGTAGAGTACCGCCCGCGACAGCAAGCTACAGCTTTTGCAAAGAAC
ACTTGGAATCTGGAACGCGTGTAGTGAAATCCTGGGAGCCTTGCTTGGCT
TTTGGGTACAGGCTCCTTCGTGGGAGTAGCCGCAAGAGGGAACCCACTTG
GTACTACTCGTTAATATTATAGTTGCCTACCGGTAGTAATCACCTGCTGA
CGTACTCGTAGTGCTGTTTTCGTAATTCGTAATTTATTTTCGACTACGAA
GCAAGTCAACGACCACTCTCTGTTTGTATAACATAAAGATACTAACGTTG
TTTTTAAAGAAAAATCCGAACAGCACCTAGACTTTTTGAGCATCCCCCGT
AGGGGGAGGAAATGTCAAAACGTTTAGGCGGGGTCAAAGGCTGCAGTGAC
AAAAACCTCTTCATTGTATTAAACAGGTTCCCCAATGTAGATAACATTGG
GTCAACAATATAATGTCGGGGAGAAACCCACCGTTATACTGTACATTTAC
ATTAATCTCCATGCAGGGACACCATTAAAGCATTAGACAAAAACCAGAGA
CAGAGTAGTACTACCTCCAAATGGTATTATTAATAGTAATATTGTACATT
CGACGTAGGAATATAAGGTTGTTGATGAATATACCATTTCAGTTTGGGGT
AGACAGGGAGCTTAGGTTACACTAAATTATCTAGGCTCGGGTGGGTGTAA
TTAGTGGTCATATCTTATTCACCAATCAATAATCAAGCAATACTAGTAGA
ATGGGAGAGGTTCATTAGTGTACTACGTCCTACCAATAATTGCCATCTAT
GTTAGTATACTTTACCTTTCCATTGTTTATCATGCAGGGTTATCCATGTA
AGAGACGGGGAACTTTAGGTTAAAGAAAAGTCAACTCAGAACAACCACCT
GGGATATTACACCAAGGCCAGCAGTGTCATACAGGAGGATAGAGGTACTG
AGGTATATATTACAAATCAGAGCACCGTTGGGTCTTCTGGGTACATAGAC
ATTTAGGTGAGGTCACCTTCTACATGATTGTCATTGTATATAGTTTATAG
GTACATAGTATGATCAAAGACAAAACAGTTTTAGTAGTAGTCATAGATAC
CTACGAGGTACAGTATAATTGCAGGTGAAGTATGATTTTTGGCTTCAACA
TAAGACGGGGAACTTTAGGTTAAAGAAAAGTCAACTCAGAACAACCACCT
GGGATATTACACCAAGGCCAGCAGTGTCATACAGGAGGATAGAGGTACTG
AGGTATATATTACAAATCAGAGCATCGTTGGGTCTTCTGGGTACATAGAC
ATTTAGGTGAGGTCACCTTCTACATGATTGTCATTGTATATAGTTTATAG
GTACATAGTATGATCAAAGACAATACAGTTTTAGTAGTAGTCGTAGATAC
CTACGAGGTACAGTATAATTGCAGGTGAAGTATGATTTTTGGCTTCAACA
TAATCCAGAGAGTAGAAAGAGCAGTATTCACCTGAAACATTTTTTAGTGG
CCATTTCTACTCAACAGACAGTAATCAAACACCACTAGTAGAATGGGAGA
GGTTTATTAATATACTTCGTCCTACCATTAATTGCCATCTATATTAGTAT
ACTTTAACTTTCCATTATTTATCATGCAGGGTTATCCATATAAGAGACGG
GGAACTTTAGGTTAAAGAAAAGTTAGAAGTCTTTTAAAGAAAAATCAGGA
TAGCCCTTAGGATATTACAACTAGGGCCAGCAGTGTCATACAGGGGGATA
GAGGTACTGAGGTATATATTACAAGTCAGAGCTCCTTTGGGTCTTTAGGT
ACGTCGACATTTAGGTGAGGTCAAATTCTACATGATTGTTTTGTTCGAGG
ATACCGGTAGTTACTATCGTATACTACTATTACTATTGTACTGTACTGTA
TTGTACTGTGTGTGTGATTTTTCTTCCCATCCATTCTGGACATCAATGGA
CGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGATTTCTCATCC
ACCTTCCTTCTGCGGTGCGTGCCTTAATTTTTATCGCGAGAAGGATTCAG
CCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTTGTGTACTAACGA
ATCAATCGTTTTCCACCCGTTGGGTTTATTTTAGTTTTTAGTTTTTAGTG
AGAAAAATCCCGTTTGCCGGGATCGAACTCACGTCCCAACGTGTCAGAGG
GTTACGAGGTACCTCTGAGCTACCGGGGCGACCAGTGTACACTAATATAC
TCAGTATGATGTAACACAAGCGCCAGTGGTACAGTATGTACCGTAAATCA
ATACTTTAGGGAAATTTTCCAGTATCACCTCTAGACTACCAGGTATATCT
ATAACTTCTAGACTCCCCTCATTGACACCCATCCGTACTGCATGTAATTT
AATGTCATGAGGTTTTTTTAGCCTATGAAACAACAATCTTATACCAGTAT
AGTCTAGTATTCTTACTATGGTATTACTATTAGGGTACTGCACTGTATCG
CACTGTACACTATGACGATGATAATAAATTACTTGGCGTTTTCTTTTAAA
AAAAACGCAGGTTTAGGCGTGTTCTGATTGGACAATCTTCTAGTATAACG
TCTACATCATCAATACTTGTATCGTATAGTATGACGACAGACAGATGCTT
CTTCCTCCTGTGTTTCTGGTCAACGCGGGACCATAGCTAAGTCCATGTAT
GAGGAGCATATGATGTGTGTCGTAGACCTGACAAGTATTGAGCGAGGAAC
CCAGTTCTTTCCGCTTGGCTCTTACTTGCTTGTGTGATCTCCCACTGCTC
TTCGTCTACTTCCAGGTGAATGACGGTGTCGTGTGTACTTTCTGGATTAT
GAAGATAATCTACATCATCACGGTCCTCTGTTCTCGTTTCAATGTTGTGC
AGTATTGGATTCGCCTTTATTGTTTGATGATGTACTATCTGTTTTGACTT
CACTGTTTTTCTGGTGTCCCTGCATGGCGATTAATGTAAGTGTACAATCA
GTATAACGGTGGGCTTCTCCCCGATGTTATACTGTTGACCCAATGTTACC
ACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATTTGCAGC
CTTTGATCCGACCTAAACGTTTTGACATTTTCCCCCCCTGACTGGGGGAT
GCTCAGAAGGTCTAGGTACGTTCTGTTCTTTCTTTAAATAACGATAGGTC
TCTCCCCGACATTTTACGGTTGCCCCATGTCTTTAAAGAAAAACCAGAAC
GCGCCTATACTTTCTGAGCATCCTCCAGTCAGAGGAAAAAATGTCAAAAC
GTTTAGGTGGGGTCAAAGGCTGCAAATATAAAAACCTCTTCATGGCATTT
AAACGGGTTCCCCTATGGTTGTAACATTGGGTCAACAGTATAATGTCGGG
GAGAAGCCCACCGTTAAACTGTACACTTACATTAATCGCCATGCAGGGAC
ACCAAAAAAACAGCAACAAACAAAAACATTGTAATAACTCATGAAAACAT
TGTAGTGATAATATACTTGTTACCTAGGCTAGAAGGACGAAGAACACTAC
ATCTAATGTTACCATATTGTCATTGGTAAAGAGAAAATTATTTTGTCCTG
TTGATTTTCCGCCTACATCACAATAACATGCATTGGTGGCAAGTCTATTA
CTTACTATATATTTTTCTAAACAGTGTTTAGGTAGGGTCATAGGCTACAA
CGAAGACCTACTCATGGTATTTAAACGGTTTCACCAGGGGGAGTAACATT
GGGTCAACAGTATAATGTCGTGGGAGGAAAAGCCCACCGTTATACTATAC
ACTTACATTAATCACCATGCCCGGACACCAAAAAGACCTGTGAAAACCAA
TACATTGTAGTACATACCACAACCAAAGTCATCAAAAAACAATGTAGTAG
GTACATAATTAGATAGGACAGTAATAATATATTCGACGATAATTGTTATG
TTTGGACGCTTTGCATGGCGATTAATATAAGTGTACAGTATACCGGTAAA
CTCCTACCCGATAATATACTGTTGACCCATGGTTACTACCATAGGGGAAC
CCGTTTAAATACCATGTAGTGTTTTCGCTTATGTAATACCAGTAGTATAT
TATTACTACCATGTTTGATAATGTACTACCGTGGCAACATTCTTTGGAGG
GCCGAACCCGTGTATGTGGCAAAATACTGGGATGACTTGAGTTTAGGGGT
GAAAGGCCAATCAAAGTCGGTGATAGCTGGATTTCTGCGAAATCTATTTA
AGTAGAGCGTTCTATTAAATAAATTTGGGGTAGAGTAGAGCACTGTGTAA
GCAAGGGGGAGATTTTCTCTTACCAAACTTTGGCAAACTCCGAATACAAA
TTTTATATATAGGGCAGACAGATTTAGGCCAAGTCTTATGGGACCGAAAT
CCAGGATTCTTGAAATCTGAAATCGGTCCATTTTCGGATTTCAAGAGAAA
ATCCCATCTTATGGACTTGAAATCCGCCCATTCTCAAGAATTTGATTTTC
AAGAATCGGGCGAGGTCGACAGATTCTTGAAAATGGGCACCCATTTTCAA
GAGAGATCGGGCTCTCTTGAGAATGGTCTTTGTGTGGTATGGTCAGGCTT
TTGGCTATGCCCAGGGTATTTGTGGCTTTTGATACTTGATGTAGTGGAGC
AAATTTATGACCGGATGACACGCCGACTCGTAGCACGGAGAGTAGCGCCA
GCAGCCCGAGTGATTCTCAAGCTTTCAGGGATGGAGATTGTTGATGGAAA
CGCTGGCGCACTGGCAGCAGGTATCGCTGTCGCTGCCACGATGCGATTAT
TTGTGGATACTCCAGAGACCTCGCACGTTCGTACTTTAAACAGGGCCCAC
ATAGTTCTGAACAGCAACAGTTCTCCTCAAGAAAATGCACACCTAACGAT
ATACCAAGACGCGTCCGGCCGCAAGAAGAGATCTAATGAGTAGGCTTCAC
GTAGGTCTTCCTCCAACCAAACTGCTGCTGCGACTCACAGAGCAGCTACT
CGCACATTTTTTCCCCGTCGAGACCACGTTTCCCAGTACCAGAGTCATAG
ATAAACTAACTGTACTGTACTATATGTACGTAGTACTTACTATACTTCAG
TAGTTTTTAGTCTGTGCTGAAAAGATCAGAAAGAGAGAAGCAACCAGTCG
TTCCACGCCGACGCATAACACAGAGATCAGGGCCATGGCAGCCCGAGCGG
TTATGAGCCAAACTCAAGCCTTTGGCGATGAAGGTTACCGAGGGAAACGA
TGGGGCGGTGGCAGCAGGAATCGCTCTCGCTGCCACGATGCAGTCATTTG
TTTGTACTCTTGCGACCTCGCTGGTACAAACATGACCCACAGAGTTTAAA
ATAGCTCTACTCAAGAGAATGTACACCACCAAACAAAAGCGCCGGGCCGC
GGGGTGAGATTGAATTAGTAGACTTGACGTGGGTCTCCCATCAACTAAAC
TGTTGCTGCAACTCACACAGCAGCTACTCGTTATACAGTAAAGTATTCGG
TGCTGTGCATCTATAACACATACCTGGTACCGGTATTATTACGTACCAGT
AACAAACTGTAGTACTGAAGTTGGAGAGCAACCTATACTTTTTTTTCTGG
GCATTGTCGAAGAGAGCATTAGACTAAGAGAGCAGCACAAACCATCGCTT
GTCCCTGCCGAAAGCATGTTGGAGGTAACACCGCTGTGTTGGGTGTGTGA
ACACAAACATATGTGTTACGCATGCTCCTCTGTAGGTATAGCCCGAAGTC
GTCTCGTCTATCTATTTCTTCAACCAATCATTTTGTATCGAGTACGCCTC
CACATGACTTTGTTTAATTTTCAGTTTCCAGAGTCCCATAAGAAAAAAAA
AATCTGGAATGCAGACGTTCGCCCGAAATCCGAAAATGGTCCATTTTCAG
ATTTCAAGAATTTTGAATTTCCAGGCCCATAAAATATGGTCTTACATATA
TTTTATTTTAGTGTTTTTGAAGCAAAACGTGATATCGGTATTCGTCTTAA
ACCAAAACCAAAAAAACGTCGCAAGATTAATTCTTTTAATACATACATAC
GTGCCTTATACAATATCTTCTATGAAAGGTTTAAATTTAGGAATGCGCGT
TACATAGTTTTTGTTTTTGTTTTTGCTGTTTTTCTGGTGTCCTTGCGTGG
CGATTAATGTAAAGTATGACGGTGGGCTTCTCCCCGACATTATACTGTTG
ACCCAATGTTACTACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTT
TTGTATTTGCAGCCTAGGATCCCACCGAAACGTTTTGACATTTTTTTCCT
CCTGACTGGGGGATGACATCTCAAAAGGTATAGGCGCGTTCTGATTTTTC
TTTAAAATATTAATGGCCACCTGGGTCTAGAAAAAGAGAGGCGCGCAAAA
ATTGGCCCATAGTGATACCTGAAAAAGCAGCACCCGTTACTCGAACTATC
TTGAAGACTACTAGCTCTGGGCCGGTGGACTCTCGGCAGTGAGCGCCATC
GGCACGCAACTGCGTGACCTGACCCGCTGGCGGTTGACGGTATATGGACG
CCGTCGCGGAAATCGGGAGGAATCCCATGAGTAAGCACCAGATTCAGCCG
GATTGAGTGTGTACACTGAGCGGACTGACACGGGACGGGACGGCCGAACC
CGTCTCACGAGACCAAATCCTCAGGGTGCGAACGTGGACAGGGAAAAAAA
ACGCTTTCCGTGTTCAGCTGACAATGAGTAGGATTGACAACCATGCCCGG
TTGATCTGATTCACACTTTGCTGAAAGTGCTGACCTTCCATACATACATA
CCAGTACATAGAGTACTTACACGTTCTTTAAATAATGTTGCACTACCTAT
AGACTTTGTATTTTGTTCGTACTCGAGACAGGTTAAGACAGACGTCATCG
GTACGCATATGCGTGACCTGGTAACGTCGAGACTGACCGGATGGCGGTTG
GCGGTATAAATAAATAAATGTATAAACGCCGCCGCGGGAAGCGGGAGGAC
TCCCTTGAGTAATCACCAGATTCAGCTCGAGAGTGGAGAAGGAGCAGGCC
GAAGCTGGACGGGATGGTTGAACCCGTCTCGCGAGACCAAATTCTCAGGC
GCGAACGGGGACAGGGAAATACTGTATGCATTTTCCCTCTTCAGCTGACC
ACTAGTAGACTAGAGCAGGATTGGCAACCTTTCCTTTCCCGGTTGATCCA
TACTCACTCTTGCTATATACCAGGTATGTGTGATGACAATTTATACAGTA
ACATCCATGCTGATGCTTGGTACAAATCCGTTACTTGACATTTTGAACAT
TTTCAGGAATTTTCGCATCTTGGATTCTCTGGGATGACACCACACCACCT
GTACAGGTGACTCCTGATTTTAATGGAGGGACTCCGATCACAAGGGATTA
CTACGACGAATGGATGTCGGGAAACAGCAATGCCGCCATAGGTCAGTGCA
TCGTTCCTCTAGCTTGATGCATGTAGAACATCAGTACATGAAGCATGGAG
GAACCTCATCTGCTATAATACTACCACTTACCAGTACAATTATAGCTCTA
CCCGTACAGTTCGAGTTATAAAACAAGTGGTATGATGGGCACCCGTAAGC
CAAATCTGGGTTCGATCCCCGTGAGGCCGTTTCTAAAACCTACTTTTTAC
GGGTAAAAACATGAAAATAATTTTTGAGCTGTGTCGGATAAGACTATTTT
GTACCAGGTATGGACTAAAAAATGGAGGTCGCTGAAAAGTGAAATATCAT
TTTTTTCGGCGGCCATGATCAGGAGGTCGTTCGTTTCTATGGGGCTGAAA
TCAGCCATTTTCAATAAGCCCGTTTTTCATCTGCCGTCCGAGTTCGCTCG
CCCGCTGAAAAGTGAGTCCCTATTTTTGAGCGATTTCCCAAGTGGAATTT
GGCGCTGAAAGATGGAATCGGATGACTGGGCAGCACATGAAGCAGACATG
ACTACAGGTTTCAAACTACTCTGGGGCCCAGGTGGCACCCAAAATTGTCG
CTTGTGGGCAAAGCTTGAGCAGAGGTTGCTACAGCGTCATCTTGTCATGG
CTGGCTATAACTACTACAGCATGATGCCCATTACTACTATAGCATGATGA
GCTAGCCGGGGGGGAAAGGAGTAGAGTCATCTACTGAGCAGAAAAGCAAC
ACACCCGAGCGAGGAGCATGAGAGAGCAATGAACCATTCCCGTAGCCCTA
GTTGCTTTTAATCACCACAATCACCACCGTAACGAGGTAGCCACCGGCTC
ACACTCGAGATTTTTTAACGATCGCCCTAACTCTAGACAAAGCGTGTGAT
GTCGAATGTCCCGTGCTGAAGAGCTGCTATGCGGCCACGCATTTCGACAG
TCGAATTTGTTGTTTTTCTTTGACTGTCTGCAGAAACATTTGGGCAATAA
AAGTTGTCTATCAACCCCTCGGCACCCTTAAGCTTGATCTTTTATTACTG
ACAACATTTTGGTTGTCTTCTATCCCGTTTGATGGACGACACCGGAATAG
TTGTGCTACTATTTAGGAAATGGTTACTTGCCCCACCGGTGGACCATTCC
CAAATTTACCCCACCACCTGGATCTCGCGTCACCAGACACGGTTGGTCAC
AGTACATGCATAAGTGCGTTGGCGCGTCGCTGGGCTATCATGGGATCTAT
CGTGCAGCCCAAACGGTCCTGTCTACGTGATGTTACGGCCGGTGGGATGG
TTAGTGTTTTCTGGTATGGAAGGGCAAATAGCCAAACATACCAGAAGACA
CCAACCACCCCACTAGCCGTAACATCACGTAGACAGGACCGTTTGGGCTG
CAAGATAAACCCCATCATAGCTAACCCTAAGCCTAACACACCCATGCACG
TAGTGTGACCAACCAAGTCTTCTGCCGCGAGATCCAGGTGGGGGGGTAAA
TAGCCATACCCTACTATTTATAGTATACAGTAGCAGGCCGAGCGGACCCG
AACATGCCGGGACTAACTGTCGCTGTTTGGCAAAAAACCCCAGTAACTTT
CTCCGAAAGCTCCTTGTCTACCAGACAGTAAAGTCTACCTCCGCCCCAAG
ATTGTTGTTCTCCCTCGTTTTCCCCGATTGCACGTATTAAAAGTGGAAAC
ACTTTTTCCAGACAAGCTAAAGGAGGAGCAGACCGCCTTGTGGAAATCTA
AGGAAGAACTGTACAGAAAGATCTCCACCAAGATGACACCGTTACCAGGT
TTACTCGCCTTCCTCGATCGCTGTAGGAGGGCAGGATTAGCAATGATCAT
CGTCACCAACGCACCGCGGTTGGACGCCGAGCACACCTTGCAAGTGCTGG
ACCTCTACGATAGGCAAGATGTCTCAGAAATTGGGTGAGGAGTCTAGTCT
AACGGCGTTGCTCCACAGACGGATCTGATTCGTGGAAACCTCTGCAGCGG
TTTCCACGAATCGGATCCATTTATGGAGCAACGCCGTTACACGAGACTCA
TCGATACGCATGTAACCGACACGACTCAGCTCAACCCTGTTGGCACGTTG
GCACTTTCGACACGATACTGTAGTCCACGGTACGATACTGTAGCGCCTTT
TCGTAATCTTACTATTAATAAGAAGTCGTTTGCGACAAATTCACGTTTAA
GGGATGACTGTGGGCGATAGAGAAGCAGCTGTGCTATTTTGTTGTGATTG
ATATGTGACCATATAAAAAGGTCTCTTGAGGATAGTACCCGGTATCCATC
TCCGCGTACATTTGTCCGTGAAGCGCTTGATGAGGTAACAATATCGAACT
AGGAGCCCCTACAGTACCCACCAAATCATGAGTGAGGGAGTGAGTGTACT
TTGTTCTCTTATCTGCGAAATGCGTCAGCGAAAATTTGCGGGACGAGTTC
ACTGACACTCAAGCGTTACCGTTTGGTCCTTGTATACATGACGAAACAGC
TTTGGCAAAACAATGGTGATCGGCTGCGAGTGCGCCCGAGCCAAGCCGCA
TCCAGACCCCTACATGGAAGGCTTGTCGAGACTCGGCCTCGAAGCGGAAG
ACTGCATTGCGTTCGAGGACAGTGTAAACGGCGCGACCTCAGCTGTTTCT
GCTGGACTGTTCACGATCGGGGTCGGGGAAGGCGCTAGGGAGAAATTGGG
TGGGGTCGGCGTGGAAATGTCCGTAGCAAACTTTTTGGATAATCGTCTCT
CTAGCACGCTCGGCCTCGGTGATTTAGAGGACTAGTTGTATGTATGTGTG
GTCATCACATATAGCAGAGTGTGGATCAACCGGGCAAGGTTGCCAGTCGT
GCTCGTGGCCGGCTGAACAGGGAAAATGAATATTCCCC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1239:19767..30554-

>mRNA_F-serratus_M_contig1239.1804.1 ID=mRNA_F-serratus_M_contig1239.1804.1|Name=mRNA_F-serratus_M_contig1239.1804.1|organism=Fucus serratus male|type=CDS|length=1860bp|location=Sequence derived from alignment at F-serratus_M_contig1239:19767..30554- (Fucus serratus male)
ATGACTCACACCTACAATCTTCCAGTCTTGCTACACTCCAAGATCAACAG
TGTCTTCTCATCTCTATGCCGCGTTGGCGTCCTCCTCGCCGTCGGGCTTG
TACTTCTCAGTGACGGAGCCTACGCTTTCATTGGAAGCACGAGTTTCTCA
CGATTCACGCCGCTTGGAAGAAATCACGCTCTGCCGGCTGAGCAAGACGC
GGTTGCGCAGCACCTGCCCATGCCGTCGACCGTCAAGGGTATACTTTTCG
ACATGGATGGAACTCTTACAGACAGTGACAGCTTGCACTTCGAGGCCTAT
CGTGATACATTCCTCAAGATGACTCACACCTACAATCTTCCAGTCTTGCT
ACACTCCAAGATCAACAGTGTCTTCTCATCTCTATGCCGCGTTGGCGTCC
TCCTCGCCGTCGGGCTTGTACTTCTCAGTGACGGAGCCTACGCTTTCATT
GGAAGCACGAGTTTCTCACGATTCACGCCGCTTGGAAGAAATCACGCTCT
GCCGGCTGAGCAAGACGCGGTTGCGCAGCACCTGCCCATGCCGTCGACCG
TCAAGGGTATACTTTTCGACATGGATGGAACTCTTACAGACAGTGACAGC
TTGCACTTCGAGGCCTATCGTGATACATTCCTCAAGGTGACTCCTGATTT
TAATGGAGGGACTCCGATCACAAGGGATTACTACGACGAATGGATGTCGG
GAAACAGCAATGCCGCCATAGGTGACTCCTGATTTTAATGGAGGGACTCC
GATCACAAGGGATTACTACGACGAATGGATGTCGGGAAACAGCAATGCCG
CCATAGTGGAAACACTTTTTCCAGACAAGCTAAAGGAGGAGCAGACCGCC
TTGTGGAAATCTAAGGAAGAACTGTACAGAAAGATCTCCACCAAGATGAC
ACCGTTACCAGGTTTACTCGCCTTCCTCGATCGCTGTAGGAGGGCAGGAT
TAGCAATGATCATCGTCACCAACGCACCGCGGTTGGACGCCGAGCACACC
TTGCAAGTGCTGGACCTCTACGATAGGCAAGATGTCTCAGAAATTGGTGG
AAACACTTTTTCCAGACAAGCTAAAGGAGGAGCAGACCGCCTTGTGGAAA
TCTAAGGAAGAACTGTACAGAAAGATCTCCACCAAGATGACACCGTTACC
AGGTTTACTCGCCTTCCTCGATCGCTGTAGGAGGGCAGGATTAGCAATGA
TCATCGTCACCAACGCACCGCGGTTGGACGCCGAGCACACCTTGCAAGTG
CTGGACCTCTACGATAGGCAAGATGTCTCAGAAATTGGCTTTGGCAAAAC
AATGGTGATCGGCTGCGAGTGCGCCCGAGCCAAGCCGCATCCAGACCCCT
ACATGGAAGGCTTGTCGAGACTCGGCCTCGAAGCGGAAGACTGCATTGCG
TTCGAGGACAGTGTAAACGGCGCGACCTCAGCTGTTTCTGCTGGACTGTT
CACGATCGGGGTCGGGGAAGGCGCTAGGGAGAAATTGGGTGGGGTCGGCG
TGGAAATGTCCGTAGCAAACTTTTTGGATAATCGTCTCTCTAGCACGCTC
GGCCTCGGTGATTTAGAGGACTAGCTTTGGCAAAACAATGGTGATCGGCT
GCGAGTGCGCCCGAGCCAAGCCGCATCCAGACCCCTACATGGAAGGCTTG
TCGAGACTCGGCCTCGAAGCGGAAGACTGCATTGCGTTCGAGGACAGTGT
AAACGGCGCGACCTCAGCTGTTTCTGCTGGACTGTTCACGATCGGGGTCG
GGGAAGGCGCTAGGGAGAAATTGGGTGGGGTCGGCGTGGAAATGTCCGTA
GCAAACTTTTTGGATAATCGTCTCTCTAGCACGCTCGGCCTCGGTGATTT
AGAGGACTAG
back to top