mRNA_F-serratus_M_contig1235.1770.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A6H5KWP2_9PHAE (DUF2407_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP2_9PHAE) HSP 1 Score: 228 bits (580), Expect = 2.860e-65 Identity = 144/320 (45.00%), Postives = 161/320 (50.31%), Query Frame = 1
Query: 463 MLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXX----------------------------------------------------------------------------------------------------------------PSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGLDG--TGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSEADKE 1080
MLNPDE+L+KDFGLTENCYVHCV+TAAPPRL+LPSLTPEQA E P+TRRGFD LRNNGMTRGEVTAIRGYFSA+VR+ VE+EE WMRAQPATSEFALNVSMARR G G TL GLDG SGG RDF+FGFAMG+FLG IMLLW+WE+AVPRRQKLGILAGVTF+Q++ M+QAA N + E
Sbjct: 1 MLNPDEALIKDFGLTENCYVHCVITAAPPRLRLPSLTPEQAAEEASGNPGETSEVLLLTGGKERHLLLCTSCCIHLRGVSFWRSDTGRDGGPSSLSLVRRRGRFDASILSACLRIHQTRFDNRTGRFYGSLDKCRGGRYRRDLRGQAERRLESETEEVEDDDPATRRGFDALRNNGMTRGEVTAIRGYFSAQVRE-------------------VESEELWMRAQPATSEFALNVSMARRTTGPGGTLTGLDGFDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRRDEDE 301
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A835Z7C3_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C3_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.100e-46 Identity = 126/328 (38.41%), Postives = 168/328 (51.22%), Query Frame = 1
Query: 283 ESGDSGAPGNSINVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASP-APDREG----------------QTDWDRQVEAEE-----------------------------------------RWMRAQPATSEFALNVS-----MARRGMGRGDTLAGLDGTGPS---GGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
E GD A ++ +++KT DG+EY+V ++ +VAQ K+ V IGAEGKYLR+IA+GKML PD + + F + + +VHCVV+++ P+ XXXXXXXP+ RRGFD LR+ GMTR EV A+R YFS +V F A+P AP ++ WDRQ+ AEE WM AQ A+SEFALN + M G+ A D + G RDF+FGF MG FLGFIML W+WE VP RQK GI+AGV F +N+ Q + ++
Sbjct: 32 EGGD--ATAHTFTLKIKTTTDGKEYKVDASNVVSVAQLKDRVRAAIGAEGKYLRLIASGKMLAPDTAALAAFKVPDQSFVHCVVSSSAPQASAXXXX-XXXXXXXXXXXXPAARRGFDRLRSEGMTRAEVIAMRSYFSEQVNTFLEATPPAPQAAAGXXXXXXXQLSAAAAAESQWDRQLRAEEVGLGDVMMLIKLIMXXXXXXXXXXXESECNGQLHEEEAGSVAWMAAQSASSEFALNTARRTAAMREGGLPMAQVWASSDDEMENPEIGTSRDFVFGFIMGGFLGFIMLFWLWEPNVPHRQKGGIVAGVMFNLLINLWQHRVRTD 356
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A7S2SSC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSC9_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.210e-37 Identity = 101/284 (35.56%), Postives = 148/284 (52.11%), Query Frame = 1
Query: 232 ENVGDIEQGSVCPKSSVESGDSGAPGNSINVRVKTAGDG---REYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAR----EXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPD---REGQTDWDRQVEAEERWMRAQPATSEFALNVSM----------ARRGMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVT 1023
+ VG E G C G+ GA N++ +RVKTA G E+ V++ L V + K V V+GA+GKYLR+I +G+ML P + + F L +H VV+ APPR PS +AR + R GFD LRN G+TR V ++R YF+++V ++A + +P ++G+T+ R++ E+ W+ AQ EFA N A G G G + G RDF++GF +G F G IML W+WE RQK+GI+AG++
Sbjct: 2 DTVGTGEAGGACTPEQHGRGEGGA--NAVRLRVKTANHGDVNAEHWVTARLGDPVDRLKRRVEEVVGAQGKYLRLICSGRMLAPPTAPLSSFKLKNEDVIHAVVSDAPPRNSYPSGPTSEARVADSDSDEEEGGAGRRLGFDALRNRGLTRSGVESLRAYFASQVDEYARSQGSPLFDLQDGETEQHRRLRWEDAWIHAQSEHGEFAANFMPDPFAAPENMDATSGEGWGQVNDEVGSPLEEGSYRDFVWGFFLGFFFGVIMLFWLWEHG-SYRQKMGIMAGIS 282
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: W4HE28_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE28_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.920e-34 Identity = 96/257 (37.35%), Postives = 140/257 (54.47%), Query Frame = 1
Query: 301 APGNSI-NVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDT------LAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
AP SI N+RVKT + + + + TA+V + K+ + AEGK+LR+I GKMLN D++ + + +N ++HC ++ APP+ + +T +Q P+ RRGFD LR+ ++R +V A+R +F +V + S A REG++ DR EE WM AQ SEFALNV M D+ + + G D ++G AMG LGF ML +WE +PRRQKLGI+ GV LN +Q
Sbjct: 25 APAVSILNLRVKTLSE-KPLNIDISATASVGELKDMIKAKGEAEGKFLRLIHQGKMLNDDKAALLSCNIKQNDFIHCAMSNAPPKSLVQQMTHQQEEAALDE---PTHRRGFDCLRDT-LSREDVQALRLHFYPQVSTMISQSVA--REGESVEDRIYRIEEEWMAAQGPQSEFALNVRPRGGPMTIHDSAHHRIDMPDMSSVDNEGTTVDMVWGVAMGFVLGFFMLFLLWERTIPRRQKLGIVIGVAINLLLNFMQ 274
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A024USD5_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USD5_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.360e-32 Identity = 95/259 (36.68%), Postives = 138/259 (53.28%), Query Frame = 1
Query: 316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNV--------------SMARRGMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
+ +RVKT + + + TATV K+ + AEGK+LR+I GK+LN D++++ + N ++HC +++ PP+ + +T +Q P+ RRGFD LR+ +TR EV A+R +F +V + S A REG++ DR EE WM AQ SEFALNV S+ R M + +D G + D I+G AMG LGF ML +WE ++PRRQKLGI+ GV LN +Q
Sbjct: 31 LTLRVKTLSE-KPLNIDINATATVGDLKDMIKTKGHAEGKFLRLIHQGKLLNDDKAVLLSSNVKNNDFIHCAMSSVPPKSLVQQMTHQQ---DDVASDEPNHRRGFDCLRDT-LTREEVQALRLHFYPQVSAMISQSVA--REGESVEDRIYRVEEEWMAAQGPQSEFALNVRPRGGHITMESFHDSIHRIDM---PDMPLIDNEGTT---VDMIWGVAMGLILGFFMLFLLWERSIPRRQKLGIVVGVAINLLLNFMQ 276
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A485KRF4_9STRA (Aste57867_10619 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRF4_9STRA) HSP 1 Score: 137 bits (344), Expect = 3.160e-32 Identity = 94/262 (35.88%), Postives = 136/262 (51.91%), Query Frame = 1
Query: 316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPE----------QAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGLDGTGPS-------GGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
+++RVKT + + + TA+V + KE + AEGK+LR+I GKMLN D+ + + +N ++HC ++ APP+ + + Q + P RRGFD LR++ ++R EV A+R +F +V + S A REG++ DR EE WM AQ SEFALNV M D++ +D + G D ++G AMG LGF ML +WE +PRRQKLGI+ GV LN LQ
Sbjct: 31 LHLRVKTLSE-KPLNIEINATASVGELKEIIKTKSNAEGKFLRLIHQGKMLNDDKVCLLTCNIKQNDFIHCAMSNAPPKSIVQQVWSSCAMFFPHKALQLNQQEEIIEEPQHRRGFDCLRDS-LSREEVQALRLHFYPQVSAMISQSTA--REGESVEDRIYRVEEEWMAAQGPQSEFALNVRPRAGMMEMHDSMHRIDMPDLALMVAENEGTTVDMVWGVAMGLLLGFFMLFLLWERTIPRRQKLGIVVGVAINLLLNFLQ 288
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A7S2BQF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQF9_9STRA) HSP 1 Score: 136 bits (342), Expect = 8.720e-32 Identity = 98/294 (33.33%), Postives = 150/294 (51.02%), Query Frame = 1
Query: 310 NSINVRVK-TAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRL----QLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQ-----VEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGL-----------DGTGPSGGR----RDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAAL---NSEADKED*FASQVFP 1107
+SI +R+ ++GD RE V+ + TV K+ VS + GK+LR+IAAG+M+ P+++ + F L +H V++ PR+ Q+P + PE + RRGFD R++G+TR V ++R +FS +V QFA S +RE TD + + E+ W+ A EF +N+ G +T L D + GG RD I+GF MG FLG IML W+WE +V R K+GIL+GV+ + ++ L+ +S D D A+ V P
Sbjct: 25 SSITLRIMVSSGDVREKEVTVNINDTVESLKKAVSEALCLHGKFLRLIAAGRMITPNDARLNAFPLKSGSVIHAVISTVAPRMEQEVQIP-VAPEPESDSE------EERRGFDRFRDHGVTREGVESLRTFFSDQVTQFAVDSLGVERESLTDMNNRDNPDRARLEDAWIAAH-GQGEFGMNLDSIPNENGVSETAPALTPSLLFSHHTFDNSQEDGGNLGLPRDLIWGFLMGLFLGIIMLFWIWERSVSHRHKMGILSGVSCQLAIRYLKKFFMGHSSFGDWPDQAAADVEP 310
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A5D6XWF0_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWF0_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.920e-32 Identity = 93/259 (35.91%), Postives = 141/259 (54.44%), Query Frame = 1
Query: 316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALN 1062
I V+VKT + + RV +ATV + KE V + GAEGK+LR+I GKML+ D + ++ + ++HC ++AAPP+ + + A E + RRGFD LR+ ++R EV A+R YF ++ + S A G++ DR EE WM AQ SEF+LNV + R GM A +GTG +F++GF MG LG MLL + + +VPR+QK+G+L GV+ L+++ A++
Sbjct: 42 IVVKVKTLSE-KPIRVEILPSATVGELKELVKKQAGAEGKFLRLIHQGKMLSDDRATLESCRVKSEDFIHCAISAAPPKAVVSQMA-AAAAESQDSDREDTNRRGFDRLRDR-LSREEVQALRLYFYPQLSLYI--SQAERVPGESSEDRIYRLEEEWMDAQGPQSEFSLNVVPSARIAIDHQIDMTGMNNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPKAVS 290
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A0P1ADY7_PLAHL (Ubiquitin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADY7_PLAHL) HSP 1 Score: 135 bits (339), Expect = 1.090e-31 Identity = 94/264 (35.61%), Postives = 147/264 (55.68%), Query Frame = 1
Query: 316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRL---QLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
I ++VKT + + RV +A+VA+ KE V + + AEGK+LR+I GKML+ D++ ++ + ++ +VHC ++AAPP+ Q+ S E + +TRRGFD LR+ ++R E+ A+R YF ++ F S A G++ DR EE WM +Q SEFALNV R GM A +GTG +F++GF MG LG MLL + + +VPR+QK+G+L GV+ L+++ A++ +
Sbjct: 33 IVLKVKTLSE-KPLRVEIVHSASVAELKELVKKKVNAEGKFLRLIHQGKMLSDDKATLESCKVKDDDFVHCAISAAPPKAIINQVASTAIELEEQDDE-----TTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFI--SRAERIHGESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIATDTQIDINGMSNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRAVSDQ 282
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: G4YL67_PHYSP (Ubiquitin-like domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4YL67_PHYSP) HSP 1 Score: 135 bits (339), Expect = 1.260e-31 Identity = 88/270 (32.59%), Postives = 147/270 (54.44%), Query Frame = 1
Query: 292 DSGAPGNSINVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAA-ASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
D+ + I +++KT + + RV A +++V + KE V + AEGK+LR+I GKML+ D++ ++ + ++HC +++APP+ + + P+TRRGFD LR+ ++R E+ A+R YF ++ + + A+ P G++ DR EE WM +Q SEFALNV R GM A +GTG +F++GF MG LG MLL + + +VPR+QK+G+L GV+ L+++ A++ +
Sbjct: 29 DNNSSSGRIVLKIKTLSE-KPLRVEVAPSSSVGELKELVKKKANAEGKFLRLIHQGKMLSDDKATLESCKVKNEDFIHCAISSAPPKAVVNQMAAAGTDSDPEERDDPATRRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAARVP---GESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIAMDTQIDMNGMNNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRAVSDQ 288 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1235.1770.1 >prot_F-serratus_M_contig1235.1770.1 ID=prot_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=polypeptide|length=315bp MMALEEDDPNSSQSSVPLMSRRRVSFSSSSENVGDIEQGSVCPKSSVESGback to top mRNA from alignment at F-serratus_M_contig1235:29029..34245+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1235.1770.1 ID=mRNA_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=mRNA|length=5217bp|location=Sequence derived from alignment at F-serratus_M_contig1235:29029..34245+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1235:29029..34245+ >mRNA_F-serratus_M_contig1235.1770.1 ID=mRNA_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=CDS|length=1890bp|location=Sequence derived from alignment at F-serratus_M_contig1235:29029..34245+ (Fucus serratus male)back to top |