mRNA_F-serratus_M_contig1228.1741.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: Q8LNW7_ORYSJ (Putative polyprotein n=5 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q8LNW7_ORYSJ) HSP 1 Score: 265 bits (677), Expect = 9.240e-73 Identity = 202/669 (30.19%), Postives = 325/669 (48.58%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSAS--LEGPTVPALRKLAIDGNVPPILSSRT----RSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK--------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+K +RTDN EF + F+ I H +T P TPQ NGVAE + KA ++ D +P++ WA+ + C + ++S + +T++ K+P E+W G P S LR FG YA V K+ P+ KC+F+G P + + +V SRN+V ++ D+ E AS + P +AI+ + P I S + +S K ++ + P E+ N V L+ + EP +A+ S + W A EM + +N + V PK+K +YK RLVA+G+ Q+ G+ + + +SP +SIR LL A D EL D + AFL +++E+ Y+E PE F V RL +++YGL Q+ R W +F M + +F ++ D CV+ KVVDG A I ++++VDD L AKD++ + + A+L +F +KD+G A+ +G ITR R + +L Q Y++ +++RF++ + G Y DSDF LD R S++G V + +SW + +Q A T+EAEY+A+SE + ++LR + + E N+F D++ AI L + RTKHIDV++H++
Sbjct: 590 VKILRTDNGMEFCSKIFKSYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNAD----LPKQ-FWAEAVSTTCYLINRSPSYATDK-KTPIEVWSGSPANYSDLRVFGCTAYAH--VDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKVVISRNVVFHESVILHDKPSTNVPVESQEKASVQVEHLISSGHAPEKENVAINQDAPVIEDSDSSIVQQSSKRSIAKDKPKRNIKPPRRYIEEANIVAYALS-------VAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSA-IYLLLYVDDMLIAAKDKSEIAKLKAQLSSEFGMKDLGAAKKILGMEITRERHSGKLYLSQKGYIKKVLRRFNMHDVKPFGRSRDG----FVGYVDSDFAGDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGL--YTELCGVTSCINIFCDSQSAICLTKDQMFHERTKHIDVRYHII 1236
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A151QNH6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QNH6_CAJCA) HSP 1 Score: 229 bits (585), Expect = 1.480e-60 Identity = 198/758 (26.12%), Postives = 332/758 (43.80%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRN---FPTGS-VSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAID---------GNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATL----DVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKD-------------------KLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDV-----------------KKE----------AKIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+KCIRTDN GE+ G F+ I HE PP TPQ NGVAE + EK ++ +P+ W + ++ A D+ + S + N G+ P E+W GK HL+ FG + E K+ K ++C+++ P++ F V+ +VRSR+++ F ED+ Q ++ P P +++ G + + ++ +P + +E V + + D EP++ +A+E ++ E+W +A E E+ + EN Y V P+ K +YK R+V +G Q +G+ + E +SP + SIR +L AA D E+ D + AFL D++EE Y+E PE F E PG V RL +++YGL QA R W KF M F++ AD CVF K + I+++++VDD L KD+ + L + F +KD+G + +G I R+R R L Q Y++ +++RF++ KK+ +K+P +S G L + Y+D+D +D+R S SG ++ A GAISW SR+Q+ A T+EAE++A++E + +L++++ + + + ++ D++ AI L+ N+ R+KHIDV++H +
Sbjct: 538 LKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHA----KIPKS-FWGEAVLTAADLINLSPSRPLN-GEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDERTKLDAKVKECIYLRSPKDELGFRLWDPVNKKIVRSRDVI-----FFEDQTIQ--------------DIKKPEKPKQKEVQDSSPIVINNSGGEISQRIDEPNQTEQPESEQXXXXXXXXXXXXXXXQEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEKWLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFAE-PGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIILLLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDYIKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNEEKEEMSKVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAGDVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELGQDQE--SYVLYCDSQSAIHLSKNSTFHSRSKHIDVRYHWI 1267
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A438E432_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E432_VITVI) HSP 1 Score: 228 bits (581), Expect = 3.950e-60 Identity = 204/753 (27.09%), Postives = 331/753 (43.96%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPR-NFPT---GSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKL-------AIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPG--AVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASG------------------------------------------------GCGLC-------MEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+KC+R+DN GE+ G F + I HE T TPQ NGVAE + E+ L+ +PR W + M A D+ + S + N G P ++W GK + HLR FG + E K+ PK ++C+F+G +F V +VRSR++V + ED + + E L P V + + A + +V P + ++P ++K + E V+ D G EP ++ ++ EW KA + EM + EN Y+ V PK K ++K RLV +GF Q +GV + E +SP ++SIR +L AA+ + E+ D + AFL D++EE Y+E PE F + V +L +++YGL QA R W KF MT + + D CVF +K DG I+++++VDD L +D + + + +EL + F +KD+G A+ +G I RNR + Q Y++ +++RF++ K KIP AS LC ++ +TDSD +D+R S SG ++ A GA++W SR+Q+ A T+EAE++A++E + +L+L++ + E ++ + D++ AI L+ N+ R+KHIDV++H +
Sbjct: 411 LKCVRSDNGGEYIGPFDQYCTNHGIRHEKTVKKTPQQNGVAERMNRTILERVRCLLSHS----KLPRS-FWGEAMRTAVDLINLSPSVPLN-GDVPEKVWTGKEVSYDHLRVFGCRAFVHIPKDERSKLDPKAKQCIFIGYGHEDFGYRLYDPVDKKVVRSRDVVFLEDQTIEDIDKLESAESSTNDLVDLDPLNPPVVHDIDEEVQTPHDDAAEDDVEPEIEGEQSPQEPLXXXXXX--RSTREKQPSKKYSSNEYVMISDQG------------EPETYQEVLKHENKTEWLKAMKEEMKSLNENHTYDLVKPPKGKKILKNKWVFRRKNDGNSSQPRFKARLVVKGFDQRKGVDFDEIFSPVVKMSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGNDQLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTLDHCVFVKKYPDGNF-IILLLYVDDMLIMGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWAAVKWILRYLQGTSKMSLCFGKGEPILDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQ--ELGLKQERYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWI 1140
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: G8DCY4_PHAVU (Putative gag/pol polyprotein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=G8DCY4_PHAVU) HSP 1 Score: 227 bits (579), Expect = 1.030e-59 Identity = 198/740 (26.76%), Postives = 318/740 (42.97%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAAS-------------------------------------------------------GGCGLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+KCIRTDN GE+ G F + I HE TPP TPQ NG+AE L E+ ++ + +P+ W + + A V + S + N + P ++WFGK HLR FG Y HK A + FM + + N + DE QH++ + + + PI S A P ++ + + V D+G EP +AMES E ++W A + EM + +N ++ V PKDK +YK RLV +GF Q +G+ + E +SP ++SIR++L+ AA D E+ D + AFL D++EE Y++ P+ F + V RL +++YGL QA R W KF M +++ +D CVF K + I+++++VDD L KD + ++R +L + F +KDMG A+ +G I R+R+ ++L Q Y++ +++RF ++ +IP AS GG + YTDSD G +D+R S SG V+ A GA++W SR+Q+ A T+EAE++A++E + +L+++++ + E S +F D++ AI L N+ R+KHIDV++H +
Sbjct: 537 LKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNRTLIERVRCMLSKA----KLPKH-FWGEALYTAVHVINLSPAIALN-AEVPDKVWFGKNVKYDHLRVFGCKAYV------HKKAVRSRDVKFMEDQTIEDIDKTEKITSETDNRLSNVDPVLSDE---QHDDVDDQQLGDAFDV------------------PIDDSEXXXXXXXXXXXXXAPE--PPQVQIRRYPSDDYVTLTDEG------------EPECYLEAMESEEKKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPDGFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDFIILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQ--ELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHIDVRYHWI 1227
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: UPI001004C95A (uncharacterized protein LOC114075238 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004C95A) HSP 1 Score: 226 bits (577), Expect = 2.280e-59 Identity = 215/753 (28.55%), Postives = 328/753 (43.56%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPA-------IEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGA---VGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVF-RKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEA----------------------------KIPAASGG-------------------------------------------CG-----LCMEA-------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAAN----VFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+KCIR+DN GE+ G F R + I H+ TPP TPQ NG+AE L E+ ++ + + WA+ + A V + S + +G P +W GK + HLR FG + HK LVRSR++V F ED+ + ++ S SL P +A + N+ + H +R H + A I + + + E VL D G EP + +AMES E E W A E E+ + +N ++ V PKD+ +YK RLV +GF Q GV + E +SP ++SIR++L AA+ D E+ D + AFL D+DEE Y+E PE F E G V +L +++YGL QA R W KF M+ F++ +D CVF +K DG+ I+V+++VDD L + + + EL + F +KD+G A +G I R+RKA++L Q Y++ +++RF++ K K+P AS CG LC YTDSD +DTR S SG ++ A GA+SW SR+Q+ A T+EAE +A+ E + +L++++ F+ +G A ++ D++ AI L N+ R+KHIDV++H +
Sbjct: 1862 LKCIRSDNGGEYIGPFDRYCREQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCMLSDAK-----LSDSFWAEALNTAAYVINLSPAVAL-DGDVPDRVWTGKNVSYDHLRVFGCKAFV------HKK------------------------LVRSRDVV-----FFEDQTIEDFDKADKADFQSSESLVD-VDPVPLTIAPEENLHNDENQVDNEDGDHVQNDR---HDVVDAPVQDDVRIPSSRYSPNEYVLLTDGG------------EPESLDEAMESEEKERWFDAMEDEIKSLHDNHTFDLVKLPKDRKALKNRWVFRVKHEDGNPVPRYKARLVVKGFNQKRGVDFDEIFSPVVKMSSIRVVLGLAASLDLEVEQMDVKTAFLHGDLDEEIYMEQPEGF-EVKGKENYVCKLKKSLYGLKQAPRQWYRKFGSFMSQQGFKKTSSDHCVFVQKFSDGDF-IIVLLYVDDMLVVGHNTCRIQKLKQELSKSFAMKDLGPARQILGMQIVRDRKAKKLVLSQEKYIQKVLRRFNMDKAKVVSTPLAMHFKLSTKQCPSSDDEKEDMKKVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGREHWNAVKWVMRYLCGTSSLSLCFGTGRPILCGYTDSDMAGDVDTRKSTSGYLVTFAGGAVSWQSRLQKCVALSTTEAELIAVVEACKELLWMKR---FLG---ELGCAQERYVLYCDSQSAIHLGKNSTFHGRSKHIDVRYHWI 2549
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A2K3MXK1_TRIPR (Putative gag/pol polyprotein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MXK1_TRIPR) HSP 1 Score: 224 bits (572), Expect = 7.510e-59 Identity = 207/765 (27.06%), Postives = 328/765 (42.88%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIP------RNFPTGSVSALLVRSRNIVERQTAFSEDEREQQHEEGGAEAAS----GSASLEGPTV----PALRKLAIDGNVPPILSSR------TRSRKPHTGVEREALHCFLPAIEAEKENGVE----DVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL-------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEF--PGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRF--DVKKEAKIPAAS-------------------------GGCGLCMEA--------------------------------------------------------YTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
+KCIRT+N GE+ G F + + I H+ +PP TPQ NG+AE L E+ L+ + ++ + W + + + + + + P +W GK + HLR FG + Y E K+ K +KCVF+G R F V L+RSR++V + ED + ++++ E GS ++ + + +D NV +L+ + V +E L +K V + + DGG EP N ++ +E +EW A E EM + EN + V PK K +YK RLV +GF Q EG+ + E ++P + SIRM+L AA+ D E+ D + FL D+ EE Y+E P+ F+E V +L +++YGL QA R W KF M ++ KAD CVF + + + I+++++VDD L K+ + + L + F +KD+G A +G I R+R ++L Q Y+E +++RF D K IP AS G M A YTDSD LD R S SG ++ A GA++W S++Q+ A T+EAE++A+ E + +L+LR+ ME ++ +F DN+ I L+ N+ R+KHIDV++H +
Sbjct: 549 LKCIRTNNGGEYVGPFDKYCQDQGIRHQKSPPKTPQLNGLAERMNRTLVERMRCLLSQ-----SMLPKYFWGEALNTVVHLLNLTPCVPL-KFDVPNHVWNGKEVSYDHLRVFGCMAYVHIPKDERSKLDEKSKKCVFVGYGLDEFGYRFFDP--VQRKLIRSRDVVFMEDYTIEDIDKVENKDPTFEDEEIVDIGSTTIAPTPIIFEDAPIENQGMDLNVDNVLNPNDVVDVGATNDVVENEVVQEVASNELRRSTRDKRPSVRYPSNEYVFLTDGG-----------EPENFKEVLEDENKKEWMDAMEDEMQSLRENNTFELVKLPKGKRALKNRWVYRIKQDECTSQRRYKARLVVKGFKQREGIDFGEIFAPVVKMQSIRMVLGLAASLDLEVEKMDVKTTFLHGDLHEEIYMEQPDGFREKGKEDYVCKLVKSLYGLKQAPRQWYQKFNSVMIEHGYKMTKADHCVFFRNLSEDDFIILLLYVDDMLIVGKNISRIRELKNTLSESFSMKDLGAARKILGIEIVRDRNEKKLYLSQEKYVEKVLRRFSMDKAKAVSIPLASHFKLSHKLCPSTDEEKLRMKSIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKVHWEAVKWVMRYLRGSSNLKLTLGCKKPMLVGYTDSDLAGSLDDRKSTSGXMVTFAGGAVAWQSKLQKCVALSTTEAEFIAVVEASKELLWLRKFA--MELGVKQEKYVLFCDNQSVIHLSKNSSFHSRSKHIDVRYHWI 1292
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.200e-55 Identity = 132/381 (34.65%), Postives = 196/381 (51.44%), Query Frame = 1
Query: 841 WRKAEETEMLGMAENCVYNQVARPKDKLKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASGGCGLCMEAY------TDSDF-------------------GACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
W AE E G+ + + ++ K RLVA+GF Q EGV + E +SP PSI SIR+L A A D +L HFDAEQAF+++++DE +I +P G V RL ++YGL QA R W++ M ++ FE AD CV R + G +VVV+HVDD + ++ D+F EL + + ++G +Y GCH R+ + Q E +V +F V + + P GL +E Y D F A D R SVS A++M A + + R Q+ ++EAEYVA+S+ ++ +FLR + +F+ P VG V+EDN GAI LA+N + +KHID++HH +
Sbjct: 337 WTNAERKEFFGLNAVGTFEEGDEFGYAVRAKARLVARGFAQREGVDFFETFSPCPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGL-KSRCDQFGVELNRYMPISNLGELRWYAGCHFPRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMV---VGLKLEQYDADEPDVDEPFRSLVGYLMWLANQIRPDILNAATDRR-SVSWALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFI 712
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6CMG8_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CMG8_9ROSI) HSP 1 Score: 213 bits (542), Expect = 3.480e-55 Identity = 186/669 (27.80%), Postives = 311/669 (46.49%), Query Frame = 1
Query: 112 NGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGSV----SALLVRSRNIVERQTAF-----------SEDEREQQHEEGGAEAASGSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDKL--------------------KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQ--EFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCV-FRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKE----------------------------AKIPAASGGCGLCME----AYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
NGV E + +K ++ +N+P+ WA+ AC + ++S + + E K+ E+WF P S L+ FG YA V K+ P+ KCVF+G + + + +V SR++V +TA E++++ +H+ S +E V + + +I N +R + P E + + L N ED+ D Q EP N +A+ + E+W A + EM + +N ++ V PK K +YK RLV +G+ Q+ GV +T+ +SP +SIR LL A D EL D + FL +++E+ Y++ PE F E L +++YGL Q+ R W +F MT+ +F+++ D CV F+K DG + + ++VDD L AKD+ + + A+L ++F++KD+G A+ +G I R+RKA +L Q Y+E ++ RF+++ + +P +S L Y D+DF LD R S++G V + AISW + +Q A T+EAEY+A++E + V++L+ + F E + + + VF D++ I L + RTKHIDV++H V
Sbjct: 371 NGVIERMNRTIMKKVRCMLSN----VNLPKS-FWAEAASTACFLINRSPSVAI-EKKTTQEVWFDNPANYSDLKIFGCPAYAH--VDNGKLEPRSIKCVFLGYKASVKGYKLWCPENRKVVISRDVVFDETAMLPNLSLKDSSNKENKKQVEHQINTESTHQASTKIEN-RVASSPQYSIAKN-----RTRREIKPPKKYAEADLVAYVL--------NVAEDI----DANQ----------EPSNYSEAISCEDSEKWMFAMQEEMESLYKNKTWDLVKLPKGKKTVHCKWVFKKKEGTPGVEEPRYKARLVTKGYSQIPGVDFTDVFSPVVKHSSIRALLGIVAMHDLELEQLDVKTVFLHGELEEDFYMQQPERFTVLEKEDYACLLKKSLYGLKQSPRQWYKRFDSFMTSHDFKRSSFDSCVYFKKNSDGSF-VYLFLYVDDMLIAAKDKGEIRKVKAQLSKEFEMKDLGPAKKILGIEILRDRKASKLYLSQKGYIEKVLCRFNMQSAKPISTPLATHFRLSSALSLQSNDEIEYMSHVPYSSAVGSLITRDGVIGYVDADFAGDLDRRRSLTGYVFTIGVCAISWKATLQTTVALSTTEAEYMAITEACKEVIWLKGL--FSELNEDLQISTVFCDSQSVIFLTKDQMFHERTKHIDVRYHFV 1000
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE) HSP 1 Score: 211 bits (538), Expect = 2.150e-54 Identity = 125/375 (33.33%), Postives = 196/375 (52.27%), Query Frame = 1
Query: 925 KYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEFQEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKIPAASG---------------------------------------------GC--GLCMEAYTDSDFGACLDTRWSVSGAVLMLAKGAISWHSRMQEETASGTSEAEYVALSEVVRYVLFLRQVQEFMEPSMRVGAANVFEDNEGAIKLATNNHASRRTKHIDVKHHLV 1908
K K RLVA+G Q E + + E Y+PT S++ +RML A+A + +L HFD EQAF++++++E+ + +P+ G + L +++YGL Q+ R W+ + A+ FEQ AD CVFR + G +++VVHVDD A ++ D+F A+L + +K++G +Y GC R+++ L Q + + + + V +P +SG G G ++ Y D+DF + R SVSG ++ G +SW SR Q+ T+EAEYVAL +VV+ +LFLRQV FM P + + VFEDN+GAI+LA N ++ +KHIDV+HH +
Sbjct: 1155 KVKARLVARGDMQREYIDFGELYAPTVSVSCVRMLAASACELNLDLCHFDVEQAFVRSELEEDVNMRLPQGCGALSGMIVILGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFRELVHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFL 1528
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI) HSP 1 Score: 207 bits (527), Expect = 6.440e-53 Identity = 167/570 (29.30%), Postives = 263/570 (46.14%), Query Frame = 1
Query: 1 IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREKAIILMEELDDVINVPREKLWAQTMIFACDVTDKSVTTSTNEGKSPYELWFGKPPTASHLRPFGAVGYARQSVREH-KMAPKGEKCVFMGIPRNFPTG-----SVSALLVRSRNIV--ERQTAFSEDEREQQHEEGGAEAAS------------------GSAS--------LEGPTVPALRKLAIDGNVPPILSSRTRSRKPHTGVEREALHCFLPAIEAEKENGVEDVLACDDGGQMAMQATLDVPEPRNRRQAMESHEWEEWRKAEETEMLGMAENCVYNQVARPKDK-------------------LKYKCRLVAQGFWQVEGVHYTEKYSPTPSIASIRMLLATAAAKDGELRHFDAEQAFLKADIDEETYIEIPEEF--QEFPGAVGRLNEAIYGLVQAGRCWNNKFCDDMTAIEFEQAKADPCVFRKVVDGEAEIVVVVHVDDSLAHAKDQATMDRFAAELGQKFKLKDMGYAEYYMGCHITRNRKARELKSDQHLYLESMVKRFDVKKEAKI 1545
+KCIRTDN GE+ G F R+ I H+ TPP TPQ NG+AE L E+ L+ + +PR WA+ + V + S + +G P +WFGK + HLR FG + E K+ K +C+F+G + G V LVRSR++V E QT D+ E+ + + G S + P A+ + PP + R SR + V + ++ + DGG EP +AM+S ++W +A + E+ + EN + V P+ K L+YK RLV +G+ Q +GV + E +SP ++SIR +L+ AA D E+ D + AFL D++EE Y+E PE F Q V RL +++YGL QA R W KF M +++ +D CVF K G+ I+++++VDD L ++ + +++ EL + F +KD+G A+ +G +TR+RKA++L Q Y+E +++RF + K +
Sbjct: 1293 LKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDA----KLPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSGDLIDVNPAPLDSSPDPIQDDVHGDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSS----------------DEYVLLTDGG-----------EPECYEEAMKSECKDQWVEAMKDELQSLHENHTFELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSDHCVFVKRFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIEKVLQRFSMDKAKAV 1829 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1228.1741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1228.1741.1 >prot_F-serratus_M_contig1228.1741.1 ID=prot_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=polypeptide|length=636bp IKCIRTDNNGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAECALGLLREback to top mRNA from alignment at F-serratus_M_contig1228:186161..188605+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1228.1741.1 ID=mRNA_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=mRNA|length=2445bp|location=Sequence derived from alignment at F-serratus_M_contig1228:186161..188605+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1228:186161..188605+ >mRNA_F-serratus_M_contig1228.1741.1 ID=mRNA_F-serratus_M_contig1228.1741.1|Name=mRNA_F-serratus_M_contig1228.1741.1|organism=Fucus serratus male|type=CDS|length=3816bp|location=Sequence derived from alignment at F-serratus_M_contig1228:186161..188605+ (Fucus serratus male)back to top |