mRNA_F-serratus_M_contig1220.1715.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE) HSP 1 Score: 171 bits (432), Expect = 3.050e-49 Identity = 84/124 (67.74%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYN 372
+FE ARL NFT+VK H L+ SD+ IL EV PFV VV L E YN+AA+ DAG DLW+FWH NRLKL WYNVAKDVALIQPSSAFMERVFS+LRAC+D+RQE C DRI A+A LKYN
Sbjct: 275 LFEGARLLNFTFVKGHQLEESDVHILPEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYNVAKDVALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKYN 398
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.360e-48 Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
+F+AAR+ NF V H ++ SD+ +L EVFPFV T +VH L +EK Y+ AA+ D+G DLW+FWH NR +LP WYNVAKDVALIQPSSAFMERVFS+LRAC+DERQE C SDRI AS LKYNR
Sbjct: 384 VFKAARILNFRVVTGHGVEESDVHVLAEVFPFVTTAMVHELVVEKDLYSTAAAGTDSGCDLWAFWHDNRPELPAWYNVAKDVALIQPSSAFMERVFSLLRACMDERQEQCLSDRITASTLLKYNRA 509
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.870e-48 Identity = 82/124 (66.13%), Postives = 94/124 (75.81%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYN 372
+FE ARL NFT+VK H L+ SD+ IL EV PFV VV L E YN+AA+ DAG DLW+FWH NRLKL WY VAKD+ALIQPSSAFMERVFS+LRAC+D+RQE C DRI A+A LKYN
Sbjct: 26 LFEGARLLNFTFVKGHQLEESDVHILAEVLPFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKYN 149
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE) HSP 1 Score: 159 bits (403), Expect = 4.780e-43 Identity = 81/128 (63.28%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLK--LPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
+FEAARL +F YVK H L ++DI++L FPFV + V L+ + DYNIAAS D G+DLWSFWH NR K L WY VAKD+ L+QPSSAFMERVFSILRAC+D RQE +SDR+ ASA LKYNRG
Sbjct: 628 IFEAARLLDFRYVKQHQLHVADIDLLCR-FPFVTENDVARLKDQMDDYNIAASGVDTGYDLWSFWHDNRHKSSLCHWYGVAKDIVLLQPSSAFMERVFSILRACMDARQEKSFSDRVAASALLKYNRG 754
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5K4E0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4E0_9PHAE) HSP 1 Score: 132 bits (333), Expect = 9.170e-37 Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 7 EAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
EAARL +FT+++ H +++ L VFPF++ + V L EK DY +AA D +D W FW ++ KLP W+ V D+AL+QPSSAFMERVFS + +CLD Q +C SDRI A+A +KYNRG
Sbjct: 2 EAARLIDFTFMRRHKYSANEVRSLA-VFPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMERVFSTVHSCLDSSQNSCLSDRIMAAALIKYNRG 124
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.750e-35 Identity = 67/126 (53.17%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
+F+AA+L +FTY+K H +I L VFPFV+ D++ L EK D+ +AA++ D +D +FW N+ LP W+ + DV L+QPSSAFMERVFSILR C ERQE+ YSDRI ASA LKY+RG
Sbjct: 266 LFKAAKLTDFTYMKTHKYSNDEIRSLS-VFPFVDDDMMDGLLKEKNDFYVAATDTDTDYDNMTFWSDNKKNLPTWHELVLDVVLLQPSSAFMERVFSILRCCFSERQESVYSDRICASALLKYSRG 390
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE) HSP 1 Score: 125 bits (313), Expect = 1.050e-33 Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
+F+AA+L +FT++K I L+ V PFV +V L EK D+ +AAS+ +A + +FW+ N+ KLP W+ + DVAL+QPSSAFMERVFSILR C +ERQE YSDRI AS LKYNRG
Sbjct: 30 VFKAAKLTDFTFMKGRKYSDDTIRTLK-VLPFVKKKMVRGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRG 154
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.170e-32 Identity = 66/126 (52.38%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
MF+AA+L +F ++K I L+ V PFV + +V L EK DY +AAS+ D + +FW N +LP W+ + DVAL+QPSSAFMERVFSIL C +ERQE YSDRI ASA LKYNRG
Sbjct: 30 MFKAAKLTDFVFMKSKKYSDDTIRSLK-VLPFVKSKMVKGLLKEKEDYYMAASDTDIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFMERVFSILPCCFNERQEHVYSDRICASALLKYNRG 154
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.300e-31 Identity = 62/124 (50.00%), Postives = 83/124 (66.94%), Query Frame = 1
Query: 7 EAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
EAARL +FT+++ H +++ L VFPF++ + V L EK DY +AA D +D W FW ++ KLP W+ V D+AL+QPSSAFMERVFS +R+CLD Q +C SDRI A A +KYN G
Sbjct: 405 EAARLIDFTFMRRHKYSANEVRSLA-VFPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMERVFSTVRSCLDSSQNSCLSDRIMA-ALIKYNGG 526
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 125 bits (313), Expect = 9.470e-31 Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 1 MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIAASNADAGHDLWSFWHVNRLKLPFWYNVAKDVALIQPSSAFMERVFSILRACLDERQETCYSDRIRASAFLKYNRG 378
+F+AA+L +FT++K I L+ V PFV +V L EK D+ +AAS+ +A + +FW+ N+ KLP W+ + DVAL+QPSSAFMERVFSILR C +ERQE YSDRI AS LKYNRG
Sbjct: 558 VFKAAKLTDFTFMKGRKYSDDTIRTLK-VLPFVKKKMVRGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRG 682 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1220.1715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1220.1715.1 >prot_F-serratus_M_contig1220.1715.1 ID=prot_F-serratus_M_contig1220.1715.1|Name=mRNA_F-serratus_M_contig1220.1715.1|organism=Fucus serratus male|type=polypeptide|length=129bp MFEAARLFNFTYVKLHPLDISDIEILEEVFPFVNTDVVHNLELEKPDYNIback to top mRNA from alignment at F-serratus_M_contig1220:164627..165013- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1220.1715.1 ID=mRNA_F-serratus_M_contig1220.1715.1|Name=mRNA_F-serratus_M_contig1220.1715.1|organism=Fucus serratus male|type=mRNA|length=387bp|location=Sequence derived from alignment at F-serratus_M_contig1220:164627..165013- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1220:164627..165013- >mRNA_F-serratus_M_contig1220.1715.1 ID=mRNA_F-serratus_M_contig1220.1715.1|Name=mRNA_F-serratus_M_contig1220.1715.1|organism=Fucus serratus male|type=CDS|length=774bp|location=Sequence derived from alignment at F-serratus_M_contig1220:164627..165013- (Fucus serratus male)back to top |