mRNA_F-serratus_M_contig1219.1707.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 291 bits (744), Expect = 2.080e-95 Identity = 149/221 (67.42%), Postives = 176/221 (79.64%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMT-EEENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
GMSVR AA F VGR +I R G+VAM+ KVGP T+++ EEE++LEDIL AAR+FL+V RV LR+AVR+LCNDGR+ W+ KGPGK W+ GFL+RHPRV+ERSTRIYEANRITE++E R+ +FYE W PKA+H+HNTDETGTTPQGTKT KAFAE+GQKVVGSMRSNSREN+TVV TISADG TW PTI FK QR+Q DW + NGP AR
Sbjct: 21 GMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADGHTWAPTITFKRQRLQVDWFVERNGPEGAR 241
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 291 bits (744), Expect = 1.380e-93 Identity = 149/221 (67.42%), Postives = 178/221 (80.54%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMT-EEENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
GMSVR AA F VGR +I R G+VAM+ KVG T+++ EEE++LEDIL FAAR+FL+VGRV LR+AVR+LCNDGR+ W+ KGPGK W+ GF +RHPRV+ERSTRIYEANRITE++E R+ +FYE W + P+A+H+HNTDETGTTPQGTKT KAFAE+GQKVVGSMR+NSREN TVV TISADG TW PTIIFKGQR+QAD + NGP AR
Sbjct: 21 GMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADGHTWAPTIIFKGQRLQADCFVERNGPEGAR 241
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.660e-88 Identity = 142/221 (64.25%), Postives = 173/221 (78.28%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMTEEE-NALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
GMSVR AA + + R ++ RRL GEVAMD KVGPGTVM+EEE N++ED L +A R+ L+V R+ L E VR LC D RKT W+ KGPGK W+ GFL+RHPRV ER+TRIYEANR+T+ E RI FY W ++ P+ADH+HNTDETGTTPQG KT KA+ +AGQKVV S+R+NSREN T+VTTISADG+TW PTIIFKGQR+Q DW +++NGPPDAR
Sbjct: 21 GMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 240
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 282 bits (721), Expect = 3.730e-86 Identity = 142/221 (64.25%), Postives = 173/221 (78.28%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMTEEE-NALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
GMSVR AA + + R ++ RRL GEVAMD KVGPGTVM+EEE N++ED L +A R+ L+V R+ L E VR LC D RKT W+ KGPGK W+ GFL+RHPRV ER+TRIYEANR+T+ E RI FY W ++ P+ADH+HNTDETGTTPQG KT KA+ +AGQKVV S+R+NSREN T+VTTISADG+TW PTIIFKGQR+Q DW +++NGPPDAR
Sbjct: 262 GMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDAR 481
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE) HSP 1 Score: 256 bits (655), Expect = 4.060e-83 Identity = 132/206 (64.08%), Postives = 160/206 (77.67%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMTEEE-NALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRV 615
GMSVR AA + + R ++ RRL GEVAMD KVGPGTVM+EEE N++ED L +A R+ L+V R+ L E VR LC D RKT W+ KGPGK W+ GFL+RHPRV ER+TRIYEANR+T+ E RI FY W ++ P+ADH+HNTDETGTTPQG KT KA+ +AGQKVV S+R+NSREN T+VTTISADG+TW PTIIFKGQR+
Sbjct: 35 GMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRL 239
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.200e-81 Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 1
Query: 4 MSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMT-EEENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
MS+R+AA + V + +++RRLSG+V++D KVGP TV+T EEEN +ED L +AARHF+ + R L+E VRQLCNDGR W+A+ GPG++W+ GF KRHP +SERS RIYEANRI +DE+R++ FY+ + +++ E ADHL NTDETG+T QGTKT KA AE+GQKVVG+MRSNSRE VTVV TISA G T P II+KGQR+QADW+ NGPP+AR
Sbjct: 23 MSLRAAAQAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNAR 242
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.530e-81 Identity = 130/220 (59.09%), Postives = 169/220 (76.82%), Query Frame = 1
Query: 4 MSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMT-EEENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
MS+R+AA + V + +++RRL+G+ +MD KVGP TV+T EEE+ +ED L +AARHF+ + R L+E VRQLCNDGR W+A+ GPG++W+ GF KRHP +SERS RIYEANRI +DE+R++ FY+ + +++ E ADHL NTDETG+T QGTKT K E+GQKV G+MRSNSRENVTVV TISA G T P II+KGQR+QADW+ NGPP+AR
Sbjct: 23 MSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQADWVKGRNGPPNAR 242
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.220e-77 Identity = 135/231 (58.44%), Postives = 155/231 (67.10%), Query Frame = 1
Query: 52 ITRRLSGEVAMDGKVGPGTVMTE-EENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGP---------------------------GKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
I RL G VAM KVGP TV++E EEN+LED+L +A RH L+VGR+ L E VRQLCND R W+ K GK W+ GFLKRHPRVSER+TRIYE+NRITE++E I Y+ + PKADH+HNTDETG TPQGTKT KAFAEAGQKVV SMRSNS EN TVVTTISA+G TW PTIIFKGQR+Q DW ++ NGP DAR
Sbjct: 6 IKSRLDGAVAMKAKVGPATVLSEQEENSLEDVLLYAGRHCLAVGRLHLLETVRQLCNDSRPIPWDPEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKDWLAGFLKRHPRVSERTTRIYESNRITEDNEPCIVELYKKLAAILDEHKPKADHVHNTDETGPTPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAERNGPKDAR 236
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE) HSP 1 Score: 238 bits (608), Expect = 1.310e-73 Identity = 129/220 (58.64%), Postives = 158/220 (71.82%), Query Frame = 1
Query: 4 MSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMTEEENAL-EDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTTPQGTKTEKAFAEAGQKVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENGPPDAR 660
MSVR AA F VGR +I R G+VAM+ KVGP T++++EE++L +DIL FAAR+FL+V R+ L +AVRQLC+DGR+ W+ K PGK W+ GFL+RHPRV+ERSTRIYEANRITE++E + +FYE W L T +T +AFAE+GQKVVGSMRSNSREN TVV TISADG TW PTIIFKGQR+QADW + NGP AR
Sbjct: 1 MSVRKAAEVFGVGRTSIEDRCPGKVAMNAKVGPETILSKEEDSLLKDILLFAARNFLAVDRLHLGDAVRQLCDDGRRIPWDPEKVPGKDWLAGFLRRHPRVAERSTRIYEANRITEDEEPHMVQFYERWAA-----------LSTRSNRRPTTCTIRTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGAR 209
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.620e-73 Identity = 130/230 (56.52%), Postives = 161/230 (70.00%), Query Frame = 1
Query: 1 GMSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMT-EEENALEDILFFAARHFLSVGRVQLREAVRQLCNDGRKTAWEASKGPGKAWVQGFLKRHPRVSERSTRIYEANRITENDESRIRRFYEMWKKYIKTEDPKADHLHNTDETGTT-------PQGTKTEKAFAEAGQ-------KVVGSMRSNSRENVTVVTTISADGTTWKPTIIFKGQRVQADWMSQENG 645
GMSVR AA F VGR +I R G+ AM+ KVGP T+++ EEE++LE IL FAAR+FL+V RV LR+AVR+LCNDGR+ W+ KGPGK W+ GFL+RH RV+ERSTRI+EAN ITE++E R+ +FYE W + P+A+H+HNTDET P+ + +A KVVGSMRSNSREN TVV TISADG TW PTIIFKGQR+QADW + NG
Sbjct: 21 GMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXHRRKGPEAAEGARAHRHGNPSRHGXDCKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNG 250 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1219.1707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1219.1707.1 >prot_F-serratus_M_contig1219.1707.1 ID=prot_F-serratus_M_contig1219.1707.1|Name=mRNA_F-serratus_M_contig1219.1707.1|organism=Fucus serratus male|type=polypeptide|length=219bp MSVRSAAARFQVGRNAITRRLSGEVAMDGKVGPGTVMTEEENALEDILFFback to top mRNA from alignment at F-serratus_M_contig1219:255517..256527- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1219.1707.1 ID=mRNA_F-serratus_M_contig1219.1707.1|Name=mRNA_F-serratus_M_contig1219.1707.1|organism=Fucus serratus male|type=mRNA|length=1011bp|location=Sequence derived from alignment at F-serratus_M_contig1219:255517..256527- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1219:255517..256527- >mRNA_F-serratus_M_contig1219.1707.1 ID=mRNA_F-serratus_M_contig1219.1707.1|Name=mRNA_F-serratus_M_contig1219.1707.1|organism=Fucus serratus male|type=CDS|length=1314bp|location=Sequence derived from alignment at F-serratus_M_contig1219:255517..256527- (Fucus serratus male)back to top |