mRNA_F-serratus_M_contig1219.1703.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1219.1703.1
Unique NamemRNA_F-serratus_M_contig1219.1703.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 1.280e-104
Identity = 215/326 (65.95%), Postives = 245/326 (75.15%), Query Frame = 1 
Query:  160 EITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKED---------------------ESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVEQCNRRKRWRGPAPEKPKG*SGSATRASWTF 1074
            +ITI+LIRRRAEHNEGLIHTLEELSLHQEELESI +TLGCNCRRLKILYLQNNIIG+M+NLHHMKELEYLNLA XXXXXXXXXXXXXXXX      NFVD+DELE+S  AM+GN+HLKDLYMMGNPCQS W GFE Y IARLPQLERLDGKEITRTDRI+A Q+LP+L +E+  LA+EVR+RK  E++AA  ++     G+ +++   E S  G    D    AP K D                     +  E+ELTKHTPE RTAIYREMAEQKREK+ERQ+ENLPKDRNFE+EQ  R  RWRGPA EKP+  S SA  A   F
Sbjct:    4 KITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLALXXXXXXXXXXXXXXXXKLDLTVNFVDMDELENSVSAMEGNRHLKDLYMMGNPCQS-WAGFEAYTIARLPQLERLDGKEITRTDRIKAQQRLPALRKEIPLLAQEVRQRKLAEKEAAKLESQEKHDGNNNSDN--EHSRGGGVDADDHPTAPAKSDGATDQPGHDARPSGTDKSCDGKGEEEELTKHTPEARTAIYREMAEQKREKEERQKENLPKDRNFELEQT-RLPRWRGPASEKPRARSDSAHEAKLEF 325
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.290e-66
Identity = 137/276 (49.64%), Postives = 165/276 (59.78%), Query Frame = 1 
Query:  157 PEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVE 984
            P I++EL+RRRAEHNEGLIHTLEE+SLHQEE+E I++ LG NCR LKILYLQNNII +M NLHH+KELEYLNLA                       NF+DLD+L+ S + +    +LKDLYMMGNP Q++W GF  Y+   L QLERLDG+EITR+ RI A QQLP+L  E    A+++                                                  E   +E T HTPEVRT IYRE+AEQKREKDERQRENLPK+R+FE E
Sbjct:    3 PVISLELVRRRAEHNEGLIHTLEEISLHQEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNITIIEGLGSCEMLNKLDLTVNFIDLDKLQESIEHLASCPNLKDLYMMGNPAQANWEGFAAYVTGILSQLERLDGREITRSMRITAQQQLPALKAEYQ--AQKL--------------------------------------------------EQTAEETTPHTPEVRTQIYRELAEQKREKDERQRENLPKERDFEQE 226
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA)

HSP 1 Score: 224 bits (572), Expect = 2.700e-63
Identity = 143/280 (51.07%), Postives = 183/280 (65.36%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDER--DAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVEQ 987
            MP IT +L+R+RAEHNEG+I TLEE+SLHQEELESI+E LG  CR+LKILYLQNNII +M NL HMK+L YLNLA                       NF+DLDEL+ S D ++   +L DLYMMGNP + +WP F+ Y+IA+LPQL+ LDG EITR+ +I+A Q+LP+L  EL  LA  VR  KR +      AK AP     S++T A    +    E VD EA   G  D+S+E  +T +TPE R  IY+E+A+QK+EK++R   N PK RN+E EQ
Sbjct:   25 MPLITRDLLRKRAEHNEGMISTLEEISLHQEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKIEGLHNCEFLGKLDLTVNFIDLDELKDSIDHLQSRTNLHDLYMMGNPSEHNWPNFKHYVIAKLPQLQNLDGTEITRSMQIQARQKLPALEIELEKLASAVRTEKRAKAIITEQAKPAP-----SVTTYA----NGVTIEDVDEEAE--GSNDQSQE--MTDNTPETRVRIYQELAQQKKEKEDRANVNAPKKRNYEKEQ 291
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: F0YAK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAK5_AURAN)

HSP 1 Score: 201 bits (510), Expect = 3.360e-56
Identity = 152/269 (56.51%), Postives = 175/269 (65.06%), Query Frame = 1 
Query:  163 ITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDR 969
            IT ELIR+RAEHNEG+I TLEEL+LHQEEL +I   LG  CR+LKILYLQNNII +M NLHHMK+LEYLNLAXXXXXXXXXXXXXXXXXXXXX  NFVD+D LE S D +    HL+DLYMMGNP Q  WPGF+ Y++ARLPQL+ +DG+ ITR  RI A QQLP L  EL  LA             AAK A                          +A AP    +   DE   +TPEVRT +Y E+AEQK EKD +Q    PK+R
Sbjct:    1 ITRELIRKRAEHNEGVISTLEELTLHQEELLAIAPCLGTICRKLKILYLQNNIISKMENLHHMKDLEYLNLAXXXXXXXXXXXXXXXXXXXXXTVNFVDVDALEESMDNLASRIHLRDLYMMGNPAQVDWPGFKNYVVARLPQLKFVDGEPITRGVRIVAEQQLPKLSVELRGLA-------------AAKAAEK------------------------KAKAPVDYRDLDVDEAAPYTPEVRTKMYEEVAEQKAEKDHKQNAMKPKER 232
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.330e-56
Identity = 129/281 (45.91%), Postives = 171/281 (60.85%), Query Frame = 1 
Query:  145 RRAMPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVEQ 987
            ++ M  +T++LIR+RAEHNEG+I TLEEL+LHQEEL +I   LG  CR+LKILYLQNNII ++++LHH+K+LEYLN+A                       NFVD+DELESS D +   +HLKDLYMMGNPC+++WPGF+ Y+IARLPQL+ LDG+ ITR+ +I A QQLP L  EL  LA+E R  K  +     +D  T      + E    AS                 D SR   L   T +VR  +Y E+AE+K EK+ R+    P++R+   EQ
Sbjct:   21 KKGMNRMTLKLIRKRAEHNEGIISTLEELTLHQEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKIEGLDKCEFLNKLDLTVNFVDVDELESSMDHLADREHLKDLYMMGNPCEANWPGFKNYVIARLPQLQFLDGEAITRSMQIIAKQQLPKLAVELRSLAQEKRDEKAQKEFVDYRDIDTDEKAPYTPEVRYAASF----------------DASRR-RLAIPT-QVRLKMYEELAEEKAEKENRELRRQPRERDHAGEQ 283
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.090e-53
Identity = 132/280 (47.14%), Postives = 166/280 (59.29%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWP-GFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGS--ISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVE 984
            MP IT+EL+R+RAEHNEG+I TLEE+SLHQEELE I E +G  CR+L+ILYLQNNII +M +L HMKEL YLNLA                       NFVD D LE S D +K  +HL++LYM+GNPCQS W  GF  Y+IA LPQL+ LDGKEI R+DRI+A+Q      Q +   A++V  RK                    +S EA   +S E  E VD +     K+      E   +TP  R  +Y EMAEQK E++ R+REN P++RN E E
Sbjct:    1 MPRITVELLRKRAEHNEGIISTLEEISLHQEELEKI-EVIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGLQCCEFLNKLDLTVNFVDFDTLEDSIDHLKPLQHLRELYMLGNPCQSDWETGFREYVIASLPQLQLLDGKEIQRSDRIKALQVFRVRQQYVRKEAKKVLDRKXXXXXXXXXXXXXEDEAIEIVSGEATDISSVEVVEEVDSQHSKNKKKSVMASKEKVPYTPHTRREMYMEMAEQKEEEEARRRENQPRERNTEAE 279
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BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A3R7GRH2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GRH2_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.600e-53
Identity = 149/289 (51.56%), Postives = 187/289 (64.71%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWP-GFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTK-----------HTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVE 984
            MP IT+EL+R+RAEHNEG+I TLEE+SLHQEELE I E +G  CR+L+ILYLQNNII ++ +L HMKEL YLNLAXXXXXXXXXXXXXXXXXXX    NFVD D LE S D +K  +HL++LYM+GNPCQS+W  GF  Y+IA L QLE LDGKEI R+DRI+A+Q      + +   A+++  +   ER+           G I             E V GEA     +D ++  E TK           +TP  R  +Y EMAEQK E++ R+REN P++RN E E
Sbjct:    1 MPRITVELLRKRAEHNEGIISTLEEISLHQEELERI-EVIGTLCRKLQILYLQNNIIEKIEDLAHMKELRYLNLAXXXXXXXXXXXXXXXXXXXDLTVNFVDFDTLEESIDHLKPLQHLRELYMLGNPCQSNWETGFREYVIASLAQLELLDGKEIQRSDRIKALQVFRERQKYVRREAKKILAKNALEREQEVTKNSADDDGVI-------------EVVGGEATDVSSKDTAKSTEKTKPSVMASTEKVPYTPHTRREMYLEMAEQKEEEEARRRENQPRERNTEAE 275
[Close]
BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A1V9YPX2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPX2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 6.330e-52
Identity = 143/279 (51.25%), Postives = 191/279 (68.46%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDES--REDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVE 984
            MP IT+EL+R+R+EHNEG++ TLEELSLHQEELE I E +G  CR+L+ILYLQNNII  + +L+HMKE       XXXXXXXXXXXXXXXXXXXXXXX F+D+DELE+S + +K  +HL++LYM+GNP QS WPGF  Y++A LP+L+ LDGK+ITR++RI A+Q+LP+L  ELA LA       +  RD A  D                           E VA G  D S  +++E   +TPE R ++Y+E+AEQK E++ R+R N+P++R+ + E
Sbjct:    1 MPRITLELLRKRSEHNEGVVSTLEELSLHQEELEKI-ELVGTLCRKLRILYLQNNIIERIEDLNHMKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFIDVDELEASINHLKPLEHLRELYMLGNPAQSDWPGFASYVVASLPRLQMLDGKDITRSERILALQKLPALRAELAALAGA-----KTTRDLADMDVI-------------------------EVVAGGATDVSSNQDEEKIPYTPETRRSMYKELAEQKEEEETRKRANMPRERDAQAE 248
[Close]
BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A7S2CFI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFI3_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.890e-51
Identity = 108/171 (63.16%), Postives = 126/171 (73.68%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSW-PGFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSL 663
            MP +T  LIR+RAEHNEG+I +LEE+SLHQEELE I E LG  CR+LKI+YLQNNII +M NLHH+KELEYLNLA    XXXXXXXXXXXX       NF+D D LE S D +   +HL++LYMMGNP Q  W PGF+ Y+I RLPQLE LDG  IT++ RI A Q  P L
Sbjct:    1 MPHLTRALIRKRAEHNEGIISSLEEISLHQEELEGIREVLGTTCRKLKIVYLQNNIIPKMENLHHLKELEYLNLALNNIXXXXXXXXXXXXNKLDLTVNFIDFDHLEESIDQLVSRQHLRELYMMGNPSQMDWDPGFKDYVIHRLPQLESLDGTHITKSMRIVAAQAYPRL 171
[Close]
BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Match: A0A2D4CGR1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGR1_PYTIN)

HSP 1 Score: 197 bits (500), Expect = 3.030e-51
Identity = 150/278 (53.96%), Postives = 191/278 (68.71%), Query Frame = 1 
Query:  154 MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKILYLQNNIIGEMRNLHHMKELEYLNLAXXXXXXXXXXXXXXXXXXXXXXXNFVDLDELESSADAMKGNKHLKDLYMMGNPCQSSWP-GFELYMIARLPQLERLDGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGSSGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIYREMAEQKREKDERQRENLPKDRNFEVE 984
            MP IT+EL+R+R+EHNEG+I TLEELSLHQEELE I E +G  CRRL+ILYLQNNII  + +L HMKEL Y    XXXXXXXXXXXXXXXXXXXXX  NFVD DELE S D +K  +HL++LYM+GNPCQSSWP GF  Y++A LPQLE LDGKEI R+DRI+A+Q      + +   A  VR +K++   AAAK+  T  + S   +   +++ +    V  E     K       E   +TPE R  +Y E+AEQK E++ R+REN+P++R+ E E
Sbjct:  329 MPRITVELLRKRSEHNEGVISTLEELSLHQEELERI-EVVGTLCRRLRILYLQNNIIERIEDLVHMKELRYXXXXXXXXXXXXXXXXXXXXXXXXXTVNFVDFDELEDSIDHLKPLQHLRELYMLGNPCQSSWPEGFREYVVASLPQLELLDGKEIHRSDRIKALQVFAERQRYVREQAVRVRLQKKEA--AAAKNEETKENESDVIDVNDDSATDISSPV--ETTKKTKCSALESQEKVPYTPETRREMYMELAEQKEEQEARRRENMPRERDTEAE 601
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1219.1703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT33_ECTSI1.280e-10465.95Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835Z7F5_9STRA1.290e-6649.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3HTQ6_9STRA2.700e-6351.07Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
F0YAK5_AURAN3.360e-5656.51Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4E455_9STRA5.330e-5645.91Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A662WUB0_9STRA2.090e-5347.14Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3R7GRH2_9STRA2.600e-5351.56Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A1V9YPX2_9STRA6.330e-5251.25Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2CFI3_9STRA1.890e-5163.16Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A2D4CGR1_PYTIN3.030e-5153.96Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1219contigF-serratus_M_contig1219:207127..212808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.9
Seed ortholog evalue6e-91
Seed eggNOG ortholog2880.D7FT33
KEGG koko:K19753
Hectar predicted targeting categoryother localisation
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons9
Model size1604
Cds size888
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929137.6429448-UTR-F-serratus_M_contig1219:207126..2072791622929137.6429448-UTR-F-serratus_M_contig1219:207126..207279Fucus serratus maleUTRF-serratus_M_contig1219 207127..207279 +
1690962720.442733-UTR-F-serratus_M_contig1219:207126..2072791690962720.442733-UTR-F-serratus_M_contig1219:207126..207279Fucus serratus maleUTRF-serratus_M_contig1219 207127..207279 +
1622929137.7439008-UTR-F-serratus_M_contig1219:210926..2110781622929137.7439008-UTR-F-serratus_M_contig1219:210926..211078Fucus serratus maleUTRF-serratus_M_contig1219 210927..211078 +
1690962720.5056581-UTR-F-serratus_M_contig1219:210926..2110781690962720.5056581-UTR-F-serratus_M_contig1219:210926..211078Fucus serratus maleUTRF-serratus_M_contig1219 210927..211078 +
1622929137.7600174-UTR-F-serratus_M_contig1219:211409..2115421622929137.7600174-UTR-F-serratus_M_contig1219:211409..211542Fucus serratus maleUTRF-serratus_M_contig1219 211410..211542 +
1690962720.5207784-UTR-F-serratus_M_contig1219:211409..2115421690962720.5207784-UTR-F-serratus_M_contig1219:211409..211542Fucus serratus maleUTRF-serratus_M_contig1219 211410..211542 +
1622929137.7752354-UTR-F-serratus_M_contig1219:212202..2123061622929137.7752354-UTR-F-serratus_M_contig1219:212202..212306Fucus serratus maleUTRF-serratus_M_contig1219 212203..212306 +
1690962720.5351427-UTR-F-serratus_M_contig1219:212202..2123061690962720.5351427-UTR-F-serratus_M_contig1219:212202..212306Fucus serratus maleUTRF-serratus_M_contig1219 212203..212306 +
1622929137.788997-UTR-F-serratus_M_contig1219:212634..2128081622929137.788997-UTR-F-serratus_M_contig1219:212634..212808Fucus serratus maleUTRF-serratus_M_contig1219 212635..212808 +
1690962720.544819-UTR-F-serratus_M_contig1219:212634..2128081690962720.544819-UTR-F-serratus_M_contig1219:212634..212808Fucus serratus maleUTRF-serratus_M_contig1219 212635..212808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929137.6565099-CDS-F-serratus_M_contig1219:207279..2073691622929137.6565099-CDS-F-serratus_M_contig1219:207279..207369Fucus serratus maleCDSF-serratus_M_contig1219 207280..207369 +
1690962720.453968-CDS-F-serratus_M_contig1219:207279..2073691690962720.453968-CDS-F-serratus_M_contig1219:207279..207369Fucus serratus maleCDSF-serratus_M_contig1219 207280..207369 +
1622929137.6760218-CDS-F-serratus_M_contig1219:208262..2084151622929137.6760218-CDS-F-serratus_M_contig1219:208262..208415Fucus serratus maleCDSF-serratus_M_contig1219 208263..208415 +
1690962720.4647593-CDS-F-serratus_M_contig1219:208262..2084151690962720.4647593-CDS-F-serratus_M_contig1219:208262..208415Fucus serratus maleCDSF-serratus_M_contig1219 208263..208415 +
1622929137.6918046-CDS-F-serratus_M_contig1219:208939..2090861622929137.6918046-CDS-F-serratus_M_contig1219:208939..209086Fucus serratus maleCDSF-serratus_M_contig1219 208940..209086 +
1690962720.4727318-CDS-F-serratus_M_contig1219:208939..2090861690962720.4727318-CDS-F-serratus_M_contig1219:208939..209086Fucus serratus maleCDSF-serratus_M_contig1219 208940..209086 +
1622929137.7047162-CDS-F-serratus_M_contig1219:209327..2094771622929137.7047162-CDS-F-serratus_M_contig1219:209327..209477Fucus serratus maleCDSF-serratus_M_contig1219 209328..209477 +
1690962720.4805076-CDS-F-serratus_M_contig1219:209327..2094771690962720.4805076-CDS-F-serratus_M_contig1219:209327..209477Fucus serratus maleCDSF-serratus_M_contig1219 209328..209477 +
1622929137.7174077-CDS-F-serratus_M_contig1219:210017..2103111622929137.7174077-CDS-F-serratus_M_contig1219:210017..210311Fucus serratus maleCDSF-serratus_M_contig1219 210018..210311 +
1690962720.4907036-CDS-F-serratus_M_contig1219:210017..2103111690962720.4907036-CDS-F-serratus_M_contig1219:210017..210311Fucus serratus maleCDSF-serratus_M_contig1219 210018..210311 +
1622929137.7323537-CDS-F-serratus_M_contig1219:210872..2109261622929137.7323537-CDS-F-serratus_M_contig1219:210872..210926Fucus serratus maleCDSF-serratus_M_contig1219 210873..210926 +
1690962720.4982755-CDS-F-serratus_M_contig1219:210872..2109261690962720.4982755-CDS-F-serratus_M_contig1219:210872..210926Fucus serratus maleCDSF-serratus_M_contig1219 210873..210926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1219.1703.1prot_F-serratus_M_contig1219.1703.1Fucus serratus malepolypeptideF-serratus_M_contig1219 207280..210926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1219.1703.1

>prot_F-serratus_M_contig1219.1703.1 ID=prot_F-serratus_M_contig1219.1703.1|Name=mRNA_F-serratus_M_contig1219.1703.1|organism=Fucus serratus male|type=polypeptide|length=296bp
MPEITIELIRRRAEHNEGLIHTLEELSLHQEELESIHETLGCNCRRLKIL
YLQNNIIGEMRNLHHMKELEYLNLAVNNITKVQGLHSCEFLNKLDLTVNF
VDLDELESSADAMKGNKHLKDLYMMGNPCQSSWPGFELYMIARLPQLERL
DGKEITRTDRIRAVQQLPSLCQELAPLAEEVRRRKRDERDAAAKDAPTGS
SGSISTEAAAEASAEGREGVDGEAVAPGKEDESREDELTKHTPEVRTAIY
REMAEQKREKDERQRENLPKDRNFEVEQCNRRKRWRGPAPEKPKG*
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mRNA from alignment at F-serratus_M_contig1219:207127..212808+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1219.1703.1 ID=mRNA_F-serratus_M_contig1219.1703.1|Name=mRNA_F-serratus_M_contig1219.1703.1|organism=Fucus serratus male|type=mRNA|length=5682bp|location=Sequence derived from alignment at F-serratus_M_contig1219:207127..212808+ (Fucus serratus male)
GTTGTACACGAACAAATAATAACATCAGGTGAAGTTAGGCTGTCGGGGTT
CTAGGGCTCAAGACGACATCGAGCATTATCGATCAAAGACAGTCATATAT
AGGAGTGTCTGTTGGTTTCCGTTCTCGAGAGTTGATCGTGAAAGAGGAGA
GCGATGCCGGAGATCACTATTGAGCTCATTCGCCGGAGGGCGGAGCACAA
CGAAGGATTGATCCACACTCTCGAGGAGCTGTCTCTCCACCAGGTTGGTC
GCAAGACTCGACACTCCGACGGGAAACGCCAAGATTTATCTATGTTACTC
CGCTACAAGTGATCAAAGCACTTTACCGTCGAGGTGGAGGTTGGACTTCC
TTGAAATTCACCCATATACCTCAAGGGAAGTCGAGACACAGACAAGACCT
GTCCCGACTGAGGGCATCCAGGGTATCTTTGGCGAAGAGCGGATCGCCCA
CCTTTGTTCATAATTACAGCATCCTTACATTTCGCTTCCCGTACTCGTGC
GTTTTCTTTAAACAGTTTGTACCTAGGATATTTTCATGATTATCAAGGGG
CGGTACTCGTACATACCAGGTACCTGGTACATATTATGTACATATTACTC
TTACGTGATAGAAAAACTAGGTCGATGGACAAATTATACCCGGATGTTTC
TACTGTGGACAAAATCGGGCTGTAAAGGTACGTTGGCGTCGATTTGAAGA
GAAATCTGAACGCATCGAAAACCTTCTGAATATCCACCCGGCCAGGGGAA
AATTTGTCAAAAACGTTTGCCTTGTAATTGAGAGCATTGACTGCAAGCAC
AAAAACTATTTGTCCTCGTGACTGGCGTCTGTACTCGTAGCTCACCTGTA
AGATCTGCTATTATCGATACTACAGTACAGTAGTCTTGTACTGCAAACGT
TTACCCCTTATTATTGTTCAAGTAAAGACAGTCAAGTGTAGACATTTACA
AGGCGATAATGAACCCCTTGGCCACCAAGTCACGCCCAGGGATTATCGTC
TTGTAAGCGGACATATACATCAAGAGGTCAAGAGTAGTCGTCGGCTATTG
GTGTCACTCGAATGCACTCCAACCGGAGGCGTCCACTTTTTCTGGTGCCG
TTTGGGGTACTGGTTTGGACGGTGCAACTTCCGCAGGAAGAGTTGGAATC
CATCCATGAGACGCTCGGCTGCAACTGCCGTCGGCTCAAGATCCTCTACC
TCCAAAACAACATCATCGGCGAGATGAGGAACCTTCACCACATGAAGGAA
CTCGAGTACCTCAACCTAGCCGTCAACAACATCACAAAGGTACGCTTGTT
ATCTTGCTACTTGTTTTGTCCTGCGCGATCCGCGTCCGCGTTCTTGAATA
GTCTCGCCATCTCGCGAAGGCAACGAGCCCATACCTGCCTTCATCGCATG
CCTCCAAGATACCCTTACACATGGAGCCTACATTTCCAGTAGTGTAGTTG
TGGATGCTTTCATACGTGAGCGTCGGATTTCGGTGTGAGGCTCGCTACTT
TTCAGTCCAAACACTACACTAGAGTGCGCCGAGGGAAGTCATGAGTTCCA
AGTTTTCGAAGGAAAACCCAACAAGGAGCGGAAAAAGAGGCGTTCGTGAT
GTTTGAGCATCTACCGTGCGGCTCGGAGCAATAGTCTGCAGTTAGTGCTT
GTTCTCGTATTTACAGGGAAACCCCGCTCCGAATGCCCGTCCGTTGCTTT
CTCAGCTGCTGCTCTTCGGCCTTCTCGAACGCTCAGTTTTATTTTTGTTT
TCGTGATCGGGTTTGCGTTGAGATAAATAAAGTTTTGGCGCTGTGTTCGG
TAACGCCTTCCAGGTGCAGGGCTTACACTCGTGCGAATTCCTCAACAAGC
TGGATCTCACGGTCAACTTCGTGGATCTTGACGAGCTGGAGAGCAGCGCA
GATGCCATGAAGGGCAACAAGCACCTGAAAGATCTCTACATGATGGGAAA
TCCTTGTCAGGTGATCCACAAGTACGCATCAAGAGCCAGACGGAGTTGCG
GGTTATTCACCTGCTCCGTACGCTACCATTTCACCAAATAGAATTTCGTC
AACTGTGCGAAGGCCTGCACTGGTTGGATCACCGCTGGCTAGCCGCGTTA
TCGCGTAGCTTGATGAGCCCCCCCCCACCCATCCACGAGGTCACACTCAT
CTTCTTCGCATAAGAACGCGTGTCCAACTCGCCTACTATATCATCCTGCA
GTCGTCCTGGCCGGGTTTCGAGCTGTACATGATCGCTCGCCTCCCCCAGC
TGGAGCGTCTGGACGGCAAGGAAATCACTCGAACGGATCGGATTCGCGCC
GTGCAGCAGCTTCCCTCGCTGTGCCAAGAGCTCGCCCCCTTGGCAGAGGA
GGTGAGCGGCTCTATTTGTTTCCGCGGTAGTACTACAATCGTATCCAGCG
CAGTGTTATCGCGCGCCATGTTCTTGAACCCAAGAGGCGCGCGGGGCCAC
GAGCCGAATACCGCTGACCGTAATGTTATCAAAGCTAGTTACATCCAAAC
TCGAGCGTTCTGTTTGAGGATGAGCGCGTGCGTCTCCATTCTTCGTGCAG
TCTCTTACTGTTGGTCGGGAGCGGGGATGGCAGGGGGGAGAGGGGGGGGA
GGAATTGCAATTGCAGTTGGTGTTGTGCGTGTCACGGCAGCGGCTTCTTC
GGCGTGTGTGTGTGCGCGATGTGAAGACAGGTGCAGTCGCCCCATAGACG
ACTAAACCCAATAATATTCTTAACTCTGACCCCAAAGCGACTGTTGTGAC
GACTGTTGTATCTATCCTGTAACACGGATCGCGAATCCAACGCGCATCGG
TCGCTGGCCTGATGTCCCTTACCTCATTCCGAGACACGCGCGTACAGGCT
TTTCCACGCCGTATAATTCTTGGTAACGCCGTTGTATGTAGGTCAGGCGA
AGAAAGCGCGACGAGAGAGACGCCGCCGCGAAAGACGCTCCAACAGGATC
ATCGGGATCGATTTCGACGGAGGCGGCGGCCGAGGCTTCGGCGGAAGGCC
GGGAAGGCGTCGACGGAGAAGCCGTCGCCCCGGGCAAGGAGGACGAGAGC
CGGGAGGACGAGCTGACAAAGCACACACCGGAGGTCAGAACAGCGATATA
CCGTGAGATGGCGGAGCAGAAGAGGGAGAAGGACGAAAGGCAGAGAGAGA
ATCTACCCAAGGACAGGAACTTCGAAGTCGAACAGGTCGGAGGATGGGGG
GCGGGGAGGGGCTGGGAGAAGCCGCAAGAGATAACGCCTCGAATTTTCGC
TTAGCGGTATGAACAATAAGGCAGGTGTTACCTCACGACATCTGCTGCTG
CCAGAAACCAGGTTCGGCGAAAAAGTGTTTGCGGCAGATCAAGTGTTCGT
GCTTCGAAAAGAGCTTTGGCGGCACGCCTCCCTGCTTGTTGGGCCGTTGA
TTCAGCCTTTGTTTTCTCTGGACTCGAAAGATTGAACTGCCAGTGGACGG
CACTCTAACTATAGTAAAAAACTACAAGCAGCTTCAGCAGTCTTCGGCAA
GGCGCACCCAGAATAGGAAGTTTTTCCCGCTCCTTTCAGGAAACATACCA
TTGCGCGGCGCAGCACACTCCCATGAGTGGTGGAATCGAGGCACTCAGGG
CCCAGGCTAATCACGGATGACGCGCACCGCCCCCTTTTTTGCGTCCTTCA
AACCGCGCATGGCTTCCCTTCGCACCCATTAGAGCCCTCGGTTTTTCCGC
TCCTCTTTCTGCTGCTGTTGCGGACTACTACAAACGATTGTTCAAGTGTA
ACAGGAGGAAGCGGTGGCGCGGGCCCGCGCCAGAGAAGCCGAAGGGGTAA
TCAGGCAGTGCAACGAGGGCAAGCTGGACTTTCATTTCGAGGAGACCACC
GCCTCGGGTGTGGGGGGCAGGCGCAGCAGCTGCAGGGGCGGGGACATCGT
GCTGTCGGTTTCGGTGCCGAAGTACCTGGACAGCTCGTTGATCGACCTCG
ACGTGCACCCGCACTACGTCAGCGTCGTGATCAAGGGCAAGGTGCTCTCG
TCGAGACCAGAGCGTGCGAGAGCCTCACCCCGCGTTGCAGCGATCACCTA
ATAGCAAGAAACAGGACGAAGGGGCGGGGGAAGGAGTATCATGTCCGCAT
CTCTTGTTGCTTCAAGGCTCCGCTCAAATGCCGGTGACGCGTCACGTCGG
AAGTGTGTTATGTCATACGAAGCGAGGCGACTCGATGCGATGCGATGTCC
TACGTGGTCATCTTGACGCCCGTACCCCCGCTTCCCCAATAATTGCGTAG
CTGTCGCTTGCGTTACCACCATCGCCGCTCCAGGTGCTTCGTCTTAGCCT
GCAAGCGGAGGTGAAGGCGAGTGAGGCGAAAGCGCGGAGGAGTAAAACGA
CGGGTAGCCTCGTGGTGACCATGCCCAAGGTCGACCCCTCGGAGGCAAGA
CACTGTCGCCACCGCCGTCCCTAACGCGGTCGCCGCGGCGTTGACGAGAT
TTTCCATCGGTCGCGCCCTCTCCCCCCCCTGAAACCTCTAAATTTTTCAT
CCGGCTTCTTCGTTTGGCGTGGTTTATTTTCTAGATAAAAAGGTGAGGGT
GGATGGGGTGGGGGTTTTGTTTGTTTTTCGATTAGTATATTTTGGCACCC
TCAAAGGAGAGCCTCTATCAGAAGGCGCGCATCAGCACGGGATTCGTGCG
CCGTGCTCTTCTCCCGCTGATTGAGTCGCAAGCCTTGACGTTCGACCCAA
GGGGAGGCTGTGCAATGCGCAGAGTCCGCTGTGCTGAGCGCGCGCGTCCA
CTTGTACGGCAATACACAAGCAAGTACCCTGCCAATGATACTTCTCCGAG
AAGCTAAGGCGATGGGTTCGCCTGTTTTCCACGTAAAAAATCGAGGGCAA
ACCGGATCGGCACGCCTTTCGTAGCGCAGCGATCGTTACTTATAGTACAT
GTCTTGCCTCCTTTTATTCGCCCGTGCGTTGCGCGCGTTGCGCGACCGTC
GTCGATCTGTTTCGGTGCTTCTCAGCCCCGCCAATCGACGCCTATCTTAC
CGCTGTGTCTTCCTATCAATTCGTTCAACATTCCCGCAGTCGTTGGGTCT
GCTTTCGGCGACCGATCGCGCTGCAGCCCCCCCCCGTAGCACAAGGGCTG
AGGTCGCCAAGCGCACGAAGCGGAGAGGCATGGCAGCGGCGGGGGCAGCG
TCCGCTCCAACGCTCGCGGCGATGATGATGGTGAGGGAGATAACGAAAGA
GTAGGAGAAAGAAAGAGAGTGAGTCGTGTAAAGACGAAGCGGCGCGCGCA
TCTTGCATGACTGTTTCAGAATACTTTTCCTTTCGCGTGGTCGTAGTAGT
CGGTCCTTCGATCGGCCTCGAGCAGTTTCTTTCTTTCTTAGGGAGAGTGT
TTTTCTCTTTCAAGTATTAATAGTTTGTACTTTGATTTGGTAGACATGCT
TCCGCGGCCTTTTCGTTATCTATCTCTCGACCGTACCTGGTAAGTGATTA
GGGCCGCTATACAAAAATGTACGTATCCCTGTTTTTGCGTCCCGATGCCT
CCTGCAAGGACGAGGCAAGGGCCGCTGCGAAGCGCGTAGAGGAGGCACCT
CGCCCTGCCGACCCAGGCGATTCATCCTTGTCGAAGGAAACTCCTCCGCG
AAAAGCGGTCGCGATTCGGGGCATGGTTGGGCCTCGACACGGCGGTATCG
AGATAGAACCGGCGCCGGAACTCTGTGAGGTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1219:207127..212808+

>mRNA_F-serratus_M_contig1219.1703.1 ID=mRNA_F-serratus_M_contig1219.1703.1|Name=mRNA_F-serratus_M_contig1219.1703.1|organism=Fucus serratus male|type=CDS|length=1776bp|location=Sequence derived from alignment at F-serratus_M_contig1219:207127..212808+ (Fucus serratus male)
ATGCCGGAGATCACTATTGAGCTCATTCGCCGGAGGGCGGAGCACAACGA
AGGATTGATCCACACTCTCGAGGAGCTGTCTCTCCACCAGATGCCGGAGA
TCACTATTGAGCTCATTCGCCGGAGGGCGGAGCACAACGAAGGATTGATC
CACACTCTCGAGGAGCTGTCTCTCCACCAGGAAGAGTTGGAATCCATCCA
TGAGACGCTCGGCTGCAACTGCCGTCGGCTCAAGATCCTCTACCTCCAAA
ACAACATCATCGGCGAGATGAGGAACCTTCACCACATGAAGGAACTCGAG
TACCTCAACCTAGCCGTCAACAACATCACAAAGGAAGAGTTGGAATCCAT
CCATGAGACGCTCGGCTGCAACTGCCGTCGGCTCAAGATCCTCTACCTCC
AAAACAACATCATCGGCGAGATGAGGAACCTTCACCACATGAAGGAACTC
GAGTACCTCAACCTAGCCGTCAACAACATCACAAAGGTGCAGGGCTTACA
CTCGTGCGAATTCCTCAACAAGCTGGATCTCACGGTCAACTTCGTGGATC
TTGACGAGCTGGAGAGCAGCGCAGATGCCATGAAGGGCAACAAGCACCTG
AAAGATCTCTACATGATGGGAAATCCTTGTCAGGTGCAGGGCTTACACTC
GTGCGAATTCCTCAACAAGCTGGATCTCACGGTCAACTTCGTGGATCTTG
ACGAGCTGGAGAGCAGCGCAGATGCCATGAAGGGCAACAAGCACCTGAAA
GATCTCTACATGATGGGAAATCCTTGTCAGTCGTCCTGGCCGGGTTTCGA
GCTGTACATGATCGCTCGCCTCCCCCAGCTGGAGCGTCTGGACGGCAAGG
AAATCACTCGAACGGATCGGATTCGCGCCGTGCAGCAGCTTCCCTCGCTG
TGCCAAGAGCTCGCCCCCTTGGCAGAGGAGTCGTCCTGGCCGGGTTTCGA
GCTGTACATGATCGCTCGCCTCCCCCAGCTGGAGCGTCTGGACGGCAAGG
AAATCACTCGAACGGATCGGATTCGCGCCGTGCAGCAGCTTCCCTCGCTG
TGCCAAGAGCTCGCCCCCTTGGCAGAGGAGGTCAGGCGAAGAAAGCGCGA
CGAGAGAGACGCCGCCGCGAAAGACGCTCCAACAGGATCATCGGGATCGA
TTTCGACGGAGGCGGCGGCCGAGGCTTCGGCGGAAGGCCGGGAAGGCGTC
GACGGAGAAGCCGTCGCCCCGGGCAAGGAGGACGAGAGCCGGGAGGACGA
GCTGACAAAGCACACACCGGAGGTCAGAACAGCGATATACCGTGAGATGG
CGGAGCAGAAGAGGGAGAAGGACGAAAGGCAGAGAGAGAATCTACCCAAG
GACAGGAACTTCGAAGTCGAACAGGTCAGGCGAAGAAAGCGCGACGAGAG
AGACGCCGCCGCGAAAGACGCTCCAACAGGATCATCGGGATCGATTTCGA
CGGAGGCGGCGGCCGAGGCTTCGGCGGAAGGCCGGGAAGGCGTCGACGGA
GAAGCCGTCGCCCCGGGCAAGGAGGACGAGAGCCGGGAGGACGAGCTGAC
AAAGCACACACCGGAGGTCAGAACAGCGATATACCGTGAGATGGCGGAGC
AGAAGAGGGAGAAGGACGAAAGGCAGAGAGAGAATCTACCCAAGGACAGG
AACTTCGAAGTCGAACAGTGTAACAGGAGGAAGCGGTGGCGCGGGCCCGC
GCCAGAGAAGCCGAAGGGGTAATGTAACAGGAGGAAGCGGTGGCGCGGGC
CCGCGCCAGAGAAGCCGAAGGGGTAA
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