mRNA_F-serratus_M_contig1217.1691.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: D7G091_ECTSI (Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G091_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 5.700e-141 Identity = 202/257 (78.60%), Postives = 232/257 (90.27%), Query Frame = 3
Query: 93 MARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAVGDK 863
MARK++IGGNWKCNGT E+VAALV+ LNEGG+ P NAEVVVAPPS+ +QTVKDTIRPDIKVS QNV K +PGA+TGELCA M+KDFG+EWVITGHSERRVGFG GESS+L+AEK+KVALDCGLNVI CIGE+L +REAN+TLE+VLE+HMAA K LEE+DWS+VV+AYEPVWAIGTGVTASP QAQEVH AIR WV EK+SP VAE LRIIYGGSVK++NA+ELA+CPDIDGFLVGGASLKP+F+D+IKAV K
Sbjct: 1 MARKFLIGGNWKCNGTRENVAALVEVLNEGGEFPDNAEVVVAPPSIFLQTVKDTIRPDIKVSTQNVGKNVRPGAYTGELCASMIKDFGVEWVITGHSERRVGFGCAGESSDLIAEKSKVALDCGLNVIMCIGESLAVREANQTLELVLEDHMAAFLKTLEEADWSRVVVAYEPVWAIGTGVTASPAQAQEVHSAIRAWVGEKVSPAVAESLRIIYGGSVKSSNAAELATCPDIDGFLVGGASLKPDFVDIIKAVEGK 257
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A835YH06_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH06_9STRA) HSP 1 Score: 344 bits (883), Expect = 1.300e-111 Identity = 169/258 (65.50%), Postives = 204/258 (79.07%), Query Frame = 3
Query: 93 MARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFG-EGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAVGDK 863
M RKY+IGGNWKCNGTV V+ LV LN+ GD PSNAEVV+AP LHV VKD +R D+ VSLQN + GA+TGE+ M+ DFG++WVITGHSERR GFG + GE+SE+VA+KTK A++ GL VIAC+GE+L+ REA TL+VVLE H+AA+ AL + W+KVV+AYEPVWAIGTG TASPEQAQ+VH +IR W+ +K+SP+VAE RIIYGGSVK +NA LA C DIDGFLVGGASLKPEFID+I AV K
Sbjct: 1 MPRKYVIGGNWKCNGTVAQVSDLVSTLNKAGDFPSNAEVVIAPTFLHVPMVKDAVRSDVNVSLQNCS-VDSFGAYTGEIAPEMIADFGLKWVITGHSERRTGFGGQAGETSEIVAKKTKKAIEAGLTVIACVGESLDEREAGNTLKVVLEEHLAAIADALSQEQWAKVVVAYEPVWAIGTGKTASPEQAQDVHASIRSWLSDKVSPEVAEATRIIYGGSVKGSNAGTLADCADIDGFLVGGASLKPEFIDIINAVEGK 257
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A6S9HJE1_HETAK (Triosephosphate isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HJE1_HETAK) HSP 1 Score: 337 bits (865), Expect = 1.210e-108 Identity = 171/261 (65.52%), Postives = 203/261 (77.78%), Query Frame = 3
Query: 72 RNPSCETMARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAV 854
R+ + TM+RKY+IGGNWKCNGT ESV ALVK LNEGGD P+NAEVV APP L + VK IRPDI VS QNVAK+ PGAFTGE+ APM+KDFG++W ITGHSERR GE+SE+VAEKTKVA+D GL V+ C GETLE REA +T+EVV +H+AAL L +DW+ VVIAYEPVWAIGTG ASPEQAQEVH IR ++ ++S +VA+ RIIYGGSVK ANA+E+ S DIDGFLVGGASL +F+ +I AV
Sbjct: 15 RSDASSTMSRKYLIGGNWKCNGTKESVEALVKTLNEGGDFPANAEVVCAPPMLFIDYVKTNIRPDIAVSTQNVAKSASPGAFTGEIVAPMIKDFGLDWCITGHSERR---SMEGETSEIVAEKTKVAIDAGLKVMFCCGETLEEREAERTMEVVNNDHIAALIAKLAPADWANVVIAYEPVWAIGTGKVASPEQAQEVHAQIRAFLASQVSQEVADTTRIIYGGSVKGANAAEIGSGADIDGFLVGGASLTADFLTIINAV 272
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A0G4FLS5_VITBC (Triosephosphate isomerase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLS5_VITBC) HSP 1 Score: 311 bits (797), Expect = 7.180e-98 Identity = 161/251 (64.14%), Postives = 188/251 (74.90%), Query Frame = 3
Query: 99 RKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKA 851
R IGGNWKCNGT +SVA LVK LNEGG+ P EVVVAPP+LHV V+D+IR DI VS QNV GA+TGEL M+KDFG+ W ITGHSERR GFG GESSELVA+KTK AL+ GL VI C+GE E REA KT++V+ E M AL L SDWS VV+AYEPVWAIGTG+TA+P+QAQ+ IR+W+ + ISP+VA RIIYGGSVKA NA+EL + PDIDGFLVGGASL +FI +I A
Sbjct: 60 RVPFIGGNWKCNGTKKSVADLVKLLNEGGNFPDKVEVVVAPPALHVGYVQDSIRKDISVSTQNVGLPKAYGAYTGELSGNMIKDFGVNWCITGHSERREGFGMAGESSELVAKKTKAALEQGLKVIPCVGEKKEEREAGKTMDVISEQ-MKALVAELSPSDWSNVVVAYEPVWAIGTGLTATPQQAQDTQADIRKWMADNISPEVAASTRIIYGGSVKAGNAAELFAEPDIDGFLVGGASLTSDFIAIINA 309
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: W7TSZ2_9STRA (Triosephosphate isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSZ2_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.820e-97 Identity = 157/252 (62.30%), Postives = 191/252 (75.79%), Query Frame = 3
Query: 99 RKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAV 854
++Y+IGGNWK NGT+ A +VK LN+GG +P AEVV+APP+ + VKD +RPD+ VS QN A T KPGAFTGEL A ++KDFG+ WVI GHSERR GFG GES E+VA KTKVA+D GL+V+AC+GE LE REA KT EVVL + + A+ L DWSKVVIAYEPVWAIGTG A+PEQAQEVH +IR +V+EK+ A LRIIYGGSVK ++A L PDIDGFLVGGASL +F+ +I+AV
Sbjct: 19 KRYLIGGNWKANGTLAQTAGIVKILNQGGAIPLEAEVVIAPPAHLLGYVKDNLRPDVAVSAQNSALTTKPGAFTGELPAVLLKDFGLNWVIIGHSERREGFGGPGESDEVVATKTKVAVDAGLHVMACVGEKLEQREAGKTTEVVL-SQLNAIASKLAREDWSKVVIAYEPVWAIGTGKVATPEQAQEVHESIRAFVKEKVGAQQAALLRIIYGGSVKGSSAPGLILKPDIDGFLVGGASLTSDFVTIIRAV 269
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A0G4I5M8_9ALVE (Triosephosphate isomerase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I5M8_9ALVE) HSP 1 Score: 303 bits (775), Expect = 8.630e-95 Identity = 152/262 (58.02%), Postives = 197/262 (75.19%), Query Frame = 3
Query: 69 DRNPSCETMARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFG-EGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKA 851
+R+ ARK +IGGNWKCNGT +SVA LVK LN+GG P + EV+V+PP LH+ VKD +R DI+V+ Q++ GA+TGE+ M+KDFG+ WVITGHSERR GFG + GES ++VA KT++ALD GL V+ CIGE E REA T++V+ + M AL K L+ DW+ +V+AYEPVWAIGTG+TA+P+QAQ+ H IR+W+ +K+SP +AE +RI+YGGSVKAANA EL + PDIDGFLVGGASL EFI +I A
Sbjct: 36 ERDSLTSLFARKPVIGGNWKCNGTKQSVADLVKLLNDGGSFP-DCEVIVSPPYLHIGYVKDNLRNDIEVATQDLLAKEGFGAYTGEISGAMIKDFGLNWVITGHSERRDGFGGQPGESDDVVALKTRIALDQGLKVMPCIGEKKEQREAGTTMDVI-DAQMTALVKVLKPEDWANLVLAYEPVWAIGTGLTATPQQAQDTHKGIRDWIAQKVSPSIAENVRILYGGSVKAANAEELFAEPDIDGFLVGGASLNKEFIAIINA 295
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A7S3XW33_HETAK (Triosephosphate isomerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW33_HETAK) HSP 1 Score: 300 bits (767), Expect = 2.350e-93 Identity = 150/253 (59.29%), Postives = 186/253 (73.52%), Query Frame = 3
Query: 99 RKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAVG 857
+KY++GGNWK NGT E VA+ + LNE D+P+NAEVVVAP LH+ ++ + +++S QN+AK GA+TGE A M+K+FGI W ITGHSERR GE+SE+VA KTK+A+D GL V+ C GETLE REA K +VVL + AL AL+ DW+ VVIAYEPVWAIGTGVTA+PEQAQEVH AIR W+ + D+A RI+YGGSVK +NA+EL CPDIDGFLVGGASLKPEF D++ A G
Sbjct: 60 KKYLVGGNWKANGTKEQVASWIAMLNEITDIPANAEVVVAPTWLHLPAAQNGVTSGVQISSQNIAKHSGYGAYTGETTAQMLKEFGINWCITGHSERRA---MEGETSEIVAAKTKLAIDNGLKVMFCCGETLEEREAGKLNDVVLADQCTALKAALQPEDWASVVIAYEPVWAIGTGVTATPEQAQEVHAAIRAWLSSDVHSDIAAATRILYGGSVKGSNAAELIQCPDIDGFLVGGASLKPEFKDIVAAAG 309
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A7S2W460_9STRA (Triosephosphate isomerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W460_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.080e-92 Identity = 149/253 (58.89%), Postives = 185/253 (73.12%), Query Frame = 3
Query: 93 MARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKA 851
+ +K ++GGNWKCNGT V LV+ LN +P N EVVV P +LH+ ++P+I+V QN T GAFTGE+ A +KDFG++W +TGHSERR E GE++E VA KTK+A+D G+ VIAC+GE LE R+A KTL+VVL MA+ L +DW+ V IAYEPVWAIGTG TA+P QAQEVH AIR+W+ E++SP VA +RI+YGGSVKAANA ELA CPDIDGFLVGGASLKPEF D+I A
Sbjct: 25 VGKKMLVGGNWKCNGTAAKVGQLVEMLN-AAPVPPNVEVVVCPVALHIPAAVAGLKPEIQVGAQNCCLT-GTGAFTGEIAASQLKDFGLKWTLTGHSERR----EMGETNEQVATKTKLAVDAGIQVIACVGEKLETRKAGKTLDVVLNEQMASFLATLAPADWANVAIAYEPVWAIGTGETATPAQAQEVHAAIRQWIAEQVSPAVAAAVRIMYGGSVKAANAPELAQCPDIDGFLVGGASLKPEFADIIGA 271
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A7S2AVW6_9STRA (Triosephosphate isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVW6_9STRA) HSP 1 Score: 296 bits (758), Expect = 2.750e-92 Identity = 156/256 (60.94%), Postives = 183/256 (71.48%), Query Frame = 3
Query: 96 ARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDWSKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAVGDK 863
+RKY+ GGNWKCNG V SV LV L + G +P++ EV+VAPP LHV V TIR D+ V QNV+ P GA TGE A M+KD G WVI GHSERR GFG GESSELVA KTKVA+ GL+V+AC+GE LE R+A KTLEV E +A L L E DW+KVVIAYEPVWAIGTG TA+PEQAQEVH A+REW+ +S VA RI+YGGS+K +NA +L PDIDG L+GGASLK EF D+I A K
Sbjct: 47 SRKYIFGGNWKCNGDVASVDKLVGTLGKCGPIPAHVEVMVAPPFLHVPIVSGTIRKDVAVGGQNVSLFPN-GARTGETSAAMLKDIGASWVIVGHSERREGFGMAGESSELVALKTKVAVSGGLSVMACVGEKLEERDAGKTLEVCYEQ-LAPLANKLSEDDWAKVVIAYEPVWAIGTGRTATPEQAQEVHKALREWLASNVSAKVAAETRIVYGGSMKGSNAPDLLKQPDIDGGLIGGASLKAEFFDIINAAPAK 300
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Match: A0A7S2UWV1_9STRA (Phosphoglycerate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV1_9STRA) HSP 1 Score: 301 bits (772), Expect = 7.100e-91 Identity = 148/267 (55.43%), Postives = 192/267 (71.91%), Query Frame = 3
Query: 93 MARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTVKDTIRPDIKVSLQNVAKTPKPGAFTGELCAPMVKDFGIEWVITGHSERRVGFGEGGESSELVAEKTKVALDCGLNVIACIGETLEIREANKTLEVVLENHMAALHKALEESDW--SKVVIAYEPVWAIGTGVTASPEQAQEVHHAIREWVREKISPDVAERLRIIYGGSVKAANASELASCPDIDGFLVGGASLKPEFIDVIKAVGDK*VILGYTV 887
M +K+ +GGNWKCNG + LVK LN G++P EVV+APP L++ V + +RPDIK++ QNVAK PKPGA+TGE+ +KDFG++WVITGHSERR GE +S +VA+K++VAL GL VI C GETL+ R+ N TL VVL H+ L A+ SDW + +VIAYEPVWAIGTG++A+P+QAQ+VH AIR+W+ +K+SP +A + RIIYGGSV N L CPDIDGFLVGGA+LKPEF D+I+ GYT+
Sbjct: 48 MGKKFFVGGNWKCNGNNLMGSVLVKMLNNCGEIPECTEVVIAPPMLYMGPVMENLRPDIKMAAQNVAKHPKPGAYTGEVVGETLKDFGVDWVITGHSERRANQGE---TSAIVAKKSQVALAAGLKVIFCCGETLQDRQRNNTLNVVLNQHLLGLKAAVRRSDWEANNIVIAYEPVWAIGTGLSATPQQAQDVHLAIRQWLSDKLSPKIAAQTRIIYGGSVNGKNCGTLIQCPDIDGFLVGGAALKPEFADIIRCAQPP----GYTL 307 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1217.1691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1217.1691.1 >prot_F-serratus_M_contig1217.1691.1 ID=prot_F-serratus_M_contig1217.1691.1|Name=mRNA_F-serratus_M_contig1217.1691.1|organism=Fucus serratus male|type=polypeptide|length=258bp MARKYMIGGNWKCNGTVESVAALVKALNEGGDLPSNAEVVVAPPSLHVQTback to top mRNA from alignment at F-serratus_M_contig1217:5194..17012- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1217.1691.1 ID=mRNA_F-serratus_M_contig1217.1691.1|Name=mRNA_F-serratus_M_contig1217.1691.1|organism=Fucus serratus male|type=mRNA|length=11819bp|location=Sequence derived from alignment at F-serratus_M_contig1217:5194..17012- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1217:5194..17012- >mRNA_F-serratus_M_contig1217.1691.1 ID=mRNA_F-serratus_M_contig1217.1691.1|Name=mRNA_F-serratus_M_contig1217.1691.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig1217:5194..17012- (Fucus serratus male)back to top |