mRNA_F-serratus_M_contig121.1659.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig121.1659.1
Unique NamemRNA_F-serratus_M_contig121.1659.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: D8LE47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE47_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 3.490e-61
Identity = 99/139 (71.22%), Postives = 121/139 (87.05%), Query Frame = 3
Query:  102 MNRLVKCGVEALKPQKIRSS-KWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKPEEGFLALLNWVKTGGRPK 515
            MNRLV+ G EALKPQ++  + KW +P VSRRKA VLRKKA+RDGS+G++V++ + GK +GGWDPAWD+F+APAPRPLRPP LHKNQ++RA+RAEKITAKLGEQE RLKDLNRV+A+PKPKPE+G LALL W+KT G  K
Sbjct:    1 MNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSVVMDADTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRAEKITAKLGEQEARLKDLNRVKAVPKPKPEDGTLALLRWLKTSGAAK 139          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A6H5JCG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG4_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 1.560e-60
Identity = 102/162 (62.96%), Postives = 129/162 (79.63%), Query Frame = 3
Query:   33 YSLPSLTANKYAGLILRQWYTGEMNRLVKCGVEALKPQKIRSS-KWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKPEEGFLALLNWVKTGGRPK 515
            +SLP L+  +       +     MNRLV+ G EALKPQ++  + KW +P VSRRKA VLRKKA+RDGS+G++VI+++ GK +GGWDPAWD+F+APAPRPLRPP LHKNQ++RA+RA+KITAKLGEQE RLKDLNRV+A+PKPKPE+G LALL W+K  G  K
Sbjct:   45 HSLPLLSGLREEASRQEEGLRFAMNRLVRFGAEALKPQRVAGAHKWQTPRVSRRKANVLRKKAIRDGSFGSIVIDEDTGKAIGGWDPAWDIFEAPAPRPLRPPKLHKNQRDRAQRADKITAKLGEQEARLKDLNRVKAVPKPKPEDGALALLRWLKNSGAAK 206          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A7S4KCW7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCW7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.770e-12
Identity = 51/135 (37.78%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  111 LVKCGVEALKPQKIRSSKWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKPEEGFLALLNWVKTGGRPK 515
            L++ G +AL+PQ + + KW  PL+S RKA V+RK A++DG+YG+   + ENGK   GW+P WD  +      LR P   K ++ R  RA KI + L + + R++     +   KP+P  G L L+  +  G R K
Sbjct:   19 LIRHGEQALRPQFV-NEKWRRPLISMRKAAVIRKGAIKDGTYGSF--DPENGK---GWNPMWDTPRKITS--LRLPKETKRERTREARASKIESLLEQADDRIETYRLEKEALKPEP--GVLNLIKKMNKGTRRK 143          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A7S0AE13_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AE13_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.430e-10
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 3
Query:   96 GEMNRLVKC-GVEALKPQKIRSSKWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKP 461
            G   RL+K  G EA KPQ ++ S W  P VS R+A VLRK A+RDG+YG       + +T  GWDP WD  K      +RPP   K ++ R  RA++I   L + +++++   + +   KP+P
Sbjct:   30 GRAVRLLKRHGEEAFKPQFVKES-WRKPAVSGREAAVLRKAAVRDGTYGAF-----DPQTGRGWDPLWD--KPGKVSSIRPPKETKRERTRESRAQRIEQLLEQADEKIESYRKAQLEKKPEP 144          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A7R9ZNN0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZNN0_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.940e-9
Identity = 44/117 (37.61%), Postives = 58/117 (49.57%), Query Frame = 3
Query:  102 MNRLVKCGVEALKPQKIRSSK------------WHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDV------FKAPAPRPLRPPLLHKNQQNRAKRAEKITAKL 398
            +  L + G EALKPQK+ S              W  P+VS+R  KVLRK+ALRDG+YGT  +      T  GWDP WD       FK      ++P      ++ R +RA+KI   L
Sbjct:    5 LRHLCQKGAEALKPQKVLSKAAENGFTYKETHVWRRPVVSKRVGKVLRKQALRDGTYGTFDVT-----TGVGWDPLWDPVLMPNQFKVSRYGRMQPKKKTSRERTREERAQKIEKNL 116          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A7S3H3W9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3W9_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.820e-7
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  123 GVEALKPQKIRSSKWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKPEEGFL 476
            G +AL P  ++  ++ +PLVS+R A  +RK+AL +G++G  V N+      GGWDP WD+ K      LRP   H  ++ R KRA KIT  +    +R+    +  A  +PK +  ++
Sbjct:   27 GGDALLPAMVKG-RYIAPLVSKRVAADIRKRALIEGTFGEFVPNE------GGWDPKWDIPKTM--HILRPHKGHLRERTREKRANKITTAMAGMPERIAKYEQEVADRRPKKDIHYM 135          
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Match: A0A024GL61_9STRA (Mitoc_mL59 domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GL61_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 3.600e-6
Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 3
Query:  102 MNRLVKCGVE----ALKPQKIRSSKWHSPLVSRRKAKVLRKKALRDGSYGTLVINQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLGEQEQRLKDLNRVRALPKPKPEEGF 473
            + R+++   E    AL+P  +   KW  PL+S R+A +L+K+A  +   G  ++        GGW P WD  K      +RPP  HKNQ+N  +R  KI A L +  Q+L++  +  A+   KP +G 
Sbjct:    3 LRRMLRLSAEEAGAALRPTFV-DGKWRQPLLSSRRAVMLKKRAQAENLVGKWIVGH------GGWLPEWD--KPNKHHVMRPPKGHKNQRNVHERVAKIQAALDKMPQKLEEHRK--AIKSAKPLQGL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LE47_ECTSI3.490e-6171.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCG4_9PHAE1.560e-6062.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4KCW7_9STRA5.770e-1237.78Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0AE13_9STRA3.430e-1038.21Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7R9ZNN0_9STRA9.940e-937.61Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3H3W9_9STRA7.820e-734.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A024GL61_9STRA3.600e-632.81Mitoc_mL59 domain-containing protein n=3 Tax=Albug... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:774385..780477 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue1.1e-50
Seed eggNOG ortholog2880.D8LE47
Hectar predicted targeting categoryother localisation
EggNOG OGs2EAW9@1,2SH2Q@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_004100.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1435
Cds size420
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1659.1prot_F-serratus_M_contig121.1659.1Fucus serratus malepolypeptideF-serratus_M_contig121 775299..780376 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929128.9182355-UTR-F-serratus_M_contig121:774384..7752981622929128.9182355-UTR-F-serratus_M_contig121:774384..775298Fucus serratus maleUTRF-serratus_M_contig121 774385..775298 -
1690962717.4074695-UTR-F-serratus_M_contig121:774384..7752981690962717.4074695-UTR-F-serratus_M_contig121:774384..775298Fucus serratus maleUTRF-serratus_M_contig121 774385..775298 -
1622929128.9830225-UTR-F-serratus_M_contig121:780376..7804771622929128.9830225-UTR-F-serratus_M_contig121:780376..780477Fucus serratus maleUTRF-serratus_M_contig121 780377..780477 -
1690962717.463353-UTR-F-serratus_M_contig121:780376..7804771690962717.463353-UTR-F-serratus_M_contig121:780376..780477Fucus serratus maleUTRF-serratus_M_contig121 780377..780477 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929128.9369442-CDS-F-serratus_M_contig121:775298..7754361622929128.9369442-CDS-F-serratus_M_contig121:775298..775436Fucus serratus maleCDSF-serratus_M_contig121 775299..775436 -
1690962717.419808-CDS-F-serratus_M_contig121:775298..7754361690962717.419808-CDS-F-serratus_M_contig121:775298..775436Fucus serratus maleCDSF-serratus_M_contig121 775299..775436 -
1622929128.9528737-CDS-F-serratus_M_contig121:776110..7762351622929128.9528737-CDS-F-serratus_M_contig121:776110..776235Fucus serratus maleCDSF-serratus_M_contig121 776111..776235 -
1690962717.4298558-CDS-F-serratus_M_contig121:776110..7762351690962717.4298558-CDS-F-serratus_M_contig121:776110..776235Fucus serratus maleCDSF-serratus_M_contig121 776111..776235 -
1622929128.9688401-CDS-F-serratus_M_contig121:780219..7803761622929128.9688401-CDS-F-serratus_M_contig121:780219..780376Fucus serratus maleCDSF-serratus_M_contig121 780220..780376 -
1690962717.448828-CDS-F-serratus_M_contig121:780219..7803761690962717.448828-CDS-F-serratus_M_contig121:780219..780376Fucus serratus maleCDSF-serratus_M_contig121 780220..780376 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig121.1659.1

>prot_F-serratus_M_contig121.1659.1 ID=prot_F-serratus_M_contig121.1659.1|Name=mRNA_F-serratus_M_contig121.1659.1|organism=Fucus serratus male|type=polypeptide|length=140bp
MNRLVKCGVEALKPQKIRSSKWHSPLVSRRKAKVLRKKALRDGSYGTLVI
NQENGKTVGGWDPAWDVFKAPAPRPLRPPLLHKNQQNRAKRAEKITAKLG
EQEQRLKDLNRVRALPKPKPEEGFLALLNWVKTGGRPKD*
back to top

mRNA from alignment at F-serratus_M_contig121:774385..780477-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig121.1659.1 ID=mRNA_F-serratus_M_contig121.1659.1|Name=mRNA_F-serratus_M_contig121.1659.1|organism=Fucus serratus male|type=mRNA|length=6093bp|location=Sequence derived from alignment at F-serratus_M_contig121:774385..780477- (Fucus serratus male)
CGGCAGAAAACATTTGCGTTCGTCCATACGAGTACAGCTTACCCAGTTTA ACTGCCAATAAATACGCAGGACTGATCTTGAGGCAGTGGTATACGGGGGA GATGAACCGCCTTGTAAAATGTGGAGTAGAAGCATTGAAGCCGCAGAAAA TCAGGTCCTCTAAATGGCACTCGCCTCTGGTCTCTAGACGGAAAGCCAAG GTCTTACGGAAGAAGGCGCTCAGGGACGGCTCGTACGGCACGCTTGTCAT TAACCAAGGTTTGTCTGGTAATATCCTGTTTTATTGCTGCTGGAGACTCC AATACTGCAGCTCGTGGTCCAAGCATTGGGTATTTTTCTCGAATGATAAC GATCTGCTGTCTTTTTTCCCCTGTGGTTTGGTCGTTTCTGTACTACAAAT CCCTCTCTTTTTTCTTTTTGATTAGATTATAAACTACAAATTACTTCAGA AAACGTGGATCACCATCTGGTATTTTTTCCGTGTTGTCGATGGCGGCACA AGTACGCGTTACATATACAGCAATGTGGTCGAGGCATGGGGTTTGTGTTG AGAAAAGCAAGACGAGTACAACGGCTGACCGCATAACAGAAACAGTAGTA GTATATACGAAGTAGTAGTTTACCAGTATGTGCAGACAGCGATTCATTGC ATCAAAGTACTTGGTAGTAGCTGAAGTTAAAGTCGCACTCCATGCAGTAT AATTGGTCTGTGAAAATTTGGTCTCGCGAGACATGTTCGGCCCCCCGCTA CAGCCTGCTCATTTTCCACACTCATTACTGCGCTGTATTATACGGTACTG TATCGGCGCAACGATGCGAACGGATCCCCTTTATTTTGTCTTCAACTGAT TTCCAGCTCTAGTCTATAAGTACAATACTTCCTTCAACGGGAGAGCTACC CACGTGACTCGCAAAGAACACAAAAATAACTGTACTAGCGCCAGCAGCCA GCAGCCCGAGTGATTCTGAGTCAAACTCAAGCTTTCAGGGATGGGGATTG TTGATGGAAACTCTGGCGCACTGGTAGCAGGTATCGCTGTCGCTGCCACG ATGCGGTTATTTGTTTATTCTCCAGAGACCTCGCACGTCGTACAAACAGG GCCCACATCTATTTCTGAACAGTTCTCCTCAAGAAAATGCACACCTAACG ATATACTAAGACGCGTCCGGCCACAAGAAGAGATCCAATGAGTAGGCTTC ACGTAGGTCTTGGTCCAACTAAACTGCTGCTGCGACTCACAGAGCAGCTA CTCGCACAATAGATTTTCCCCTTCGAGACCACGTTTCCCAGTACCAGAGT CATAGATACACAAATTGTACTGTAGTATATCTACGTAGTACTATACTTCA ATTGTGTTAATGCGCTGAAGAGAGCAGAACGAGAGAAGCAGCAACCAGCC GTTACACGCCGACGCGTTGCACAGTGATTAGAGCCATAGCAGCCCAAGCG GTTATGAGCCAAGCTCAAGCCTTTGGTGATGAAGGTTACCGAGGGAAACG ATGGGACGGTGGCAGCAGGAATCGCTCTCGCTGCCACGATGCAGTCATTT GTCTGTACTCTTGCGACCTCGCACGTTGGTACAAACATGACCGACATAAT TCTAAATAGCTCTACTCAAGAGAATGCACACCTTACCAAACAAAGCGCGC CGGGCCGCGGTGTGAGATTGATTAGTAGGCTTGACGTGGCTCCTCCACCA ACTAAACTGTTGCTGCAACTCACACAGCAGCTACTCATACCGTTTCCGTC GAGGCCACGTTTCCCGGTAAAGCACTCGGTGCTGTGCAAGTATAACACAT ACCGGCATTACGTAACAAACTGTAGTACTGAAATTAAATTGGAGAGCAAC CTATACTTTTTTTCTGGGCTTTGTCGAAGAGAGCATGAAGAGAGAAGCAC AAACTATCGTTTTGTCTCTGCGGAAGGCATGATGGAGGTGAACACAAACA TTTGTCTTACGCATGCCCCTCAGTGGGTAGCCCGAGTCGTCTCGTCTACC TGGTATCTATTTCTTCAACCTATCATTTTGTATCGAGTACGCCTCCATGA CTTTGTTTAATTTTCAGTTTCCAGAGTCCCATAAGAAAAATTTATTCTGG GATGCAGGCGTTCGCCCGAAATCCGAAATCCACTCGATTTCAGATTTCAA GAATTTTGAATTTCCAGGCCCATAAAAGATGGTCTAAGCTGGAAAATATG CCAACTCTAGAGACTTCAAAGAACTGAAGGAGGTGGAGGTATGTGGACCG CACTTTCTATCTACCGTAATATCCTCTGAGTTCCCCCCCCCCCGCCAAAT TTGGCAGAAATGGGCACAAAAAAATTGAGTTATCCCGGGGGGTTTTTTGG GGGGGGGGTTCATCGATCCCCCCCTACCTTGAGTTCACCCCGAGGGGAAC ACAGAAAAATTGGCAGTACCTTCCGGCAATTGTCAACTGTTTGCTGTTGT TGTGTTGGTTGTTTGAAGAAAAATCTGAAAGCACGTAGACCTTCTGATCC GCCCTCGGTAGGGGGGGAAATATCAAAACGTTAGGTGGTATCAAAGGCTG CGAATACAAAACCTCTTCATGGCATTTAAACGGGTTCCCTAATGCAGATA ACATTGGGTCAACAGTATAAAGTTGGGGAGAAACCCACCGTTATACTGTA CACTTACATCAATCGCCATGCAGGGACACCACAAAAACAGCAAAGACAAA ACAGTACATCATCAAACAATAAAGACGAATCCAAAACAACATTTGAAACG ACGACAACAGAGGACAACGGTGATGTGGACATAATCCAAGTACCCGAACC CGTATTCGCCTGGAAGTAGACGCAGAGCAGTAGGCGGTCACACAAGGAGG TAAGAGGCAAGCGGAAAGAACTGGGTTCCACGCTCCATACTTGTCAGGGC TACGGCACACAGATGCTCCTTATGCATGGACTCAGCTATGGTTCCGCGTT AACCAGAAACACAGAAGAAGCATCTGCCTGTCAAAGTGACAAAGTAGGCT CAACACCTCCTCGTATAACCCCCCATATGTTTGCTCTTGGTGTTTATAGT TTATAAAAAACTAGAACGCGCTGGACAGAAATTGAATAAATATCGGAAAA AGTCCGAGCGTTTGCAGCTGGAGAAGGGGCTAACCGAGGCGTAAGCTCCC CCAACTGCCGTCCTTCTTGTGCCTCTCAAATTGTTTTTCGTAGGTGCTGT TTAGATCCGACATGGTGAGAGCTGCGGTGTGTGTGAGGTGTATGCGATGT AATTTTCGGGAGATCCCCCCGGGGACTTTTCCCCACAGTTTTTTTTTTTA AGATCCCCCGCCCCCTACCTTTGAGTTACCCCCGGGGTGATCGTTTTCCG CAAAAATATACATCCCCTCGCGGGGGGAACTCAGAGGATATTACGGTATT ACTGCAGGGAGATGTAACCCTCCTAGTCCATTTGCTCTTATTACTAATGT ACTGTTATCAAGCTCCAAATGCATTTTTCTCCAGGATCCTCGTGTGACCC CCCTTCATGACCTACGAACGAACCCTCGAGCGAATATCTCCCCCTCCGGG CGATCTCTCTGAGCAGAAACGAGTAGCCCGGCCAACCGCCCTCCTTCACG ATCTTCCGCGGTATATTGCTTCTCCGTCTTCGAATCCATGCCGTAGGCCA CGTGCTCTTGAAGCCCTGTCATCTTCCAGAAGGCAGCATATTGCCCAAAC CCGCATGACTAAGAAGTGGCGCTATTTCCCAACTCCATACTGTACGCAAA TCTAATCCTTTTTTGGCTCACACATTTTGCCAGATGCTAGGTCAGGTAAC CATTCCCACCCACTGTAACGTTGCCCAGCCCGTCGATGGCCACGAACGAT GGCCACGAAGGGTCAAACTATCTCTCCGCGGGTCACGCTTACGATTTTTT TCACCGTGGTCTAAGTTCAGCTCGCTTGGCTCCACTCTACACCTCGTCAG CCAAAGGTTGAACTCCGCTTACAAATGCTCGTACACCTTCCACGATGAAA ACCTTAACAATAGAAATCACCCTCTAATTGAGACTCGAACTCCCGAATTC CGCACTGACGGACTACTAGTAGGTGGTTATCCGTTACGCCACCCGGGTGA CTCGTTGTCTGCAAGTATGAAATCGTGCAAAAGAGAACACTGTATCACAA ACAGTATCTTATGGAAGTAGAAACATATTTCCACGCACCCCAAGAGTGGA AATAGCTCTGTACCTTTACTTTCCCTTTGCTGCGCGCTGCAGAGAACGGC AAGACTGTTGGCGGTTGGGATCCAGCATGGGACGTTTTCAAAGCGCCTGC TCCGCGACCCTTGAGGCCGCCGTTGCTGCACAAGAATCAACAGAATAGGG CGAAGCGTGCAGAGAAGGTGAGACGTATACACCCACCCGGATGTTTTCTG CCGCGGAAGGTCCGACCCATCGCGTATTAGAGAGCGTCGTCTTAGCCCAC ATACCGCTCTCTTAAGGAGAACGTTTTTATCAGCTGCCTCCAAAAGCCCC AGTGCCACCCCGATTTCTGAGAGGGATCACCCGGCGGTGCTGTTAAGACG TCACTCACTGTCAAAAGCCAACGAGTTGTCAGCCGCATCGTGCCCCATCG AGGCACGTCCCCCTGCTTGTCTCCTGTTCGGTCACAACTTTCGAGCAGCT CCTGTAGAGCCTAACAAGAGGCTGGGCATGTAGAACGTGCGGGTAGCTGC TGTTCATGAAGTATAGAGACTACTTTTATCACGGATATTCTGACGAGGGG GCGTATTTCTCCACATGAGCGGTGAATCGCTCGATGTTCGCCCCGGATCG AGGAGCGGTGAAGCTTTTGTTCAAAACGACGTATTCCCAGCCATTGTAAC ATGCTCACACTTTTTTCAGCGGTCGCGGAGAAAATTCGAGAGGAATTCGC CTTACGTCGAGTCCCAGATTGCACAAAAACTTATCTAGAGGGAATTACTA CATTTCCCCATTTCTCTCTCTCATCATTACGCTTCACCCACTCCCTCCGA TGGCGCCGCACGATCGCGCGCCTGCGATGACGGTGTCACAGATTACTGCT AAGCTGGGAGAGCAGGAGCAACGACTCAAGGATCTGAACCGCGTAAGGGC CCTCCCCAAGCCCAAGCCAGAAGAAGGTTTCTTGGCTTTATTGAATTGGG TCAAGACTGGTGGAAGACCAAAAGATTAAAAGCTAAATTCATAATCGTTA GGTACGATGGAGAAGGGATGCGTGGGGACGCCCATCACGCCTCGTCGTTG CATTGAAAATCTGCTGCGTTGCATGTACCCAAGGACCGCTCAGCCATGTC TTGCGATGAGAGGCGTCAGTAGGGCATGTACTGTAGCCCCCGTGTCCTGA TCCGCGCCCGTTTCCGCACCGGAGAATTGCTGTGCGGCTCGTTGGGCCTT GCTTCCATAGCTCTTCACCGATACCCTTATCACTTGGACCAGTAGGAGCT TTAAATGGAGGCATTTGGTGTAGCTTGATTCGGCGACCAGCGCACTCACT TTGAAGTCGAACCGCAATCTTCACTTTCACTGGCAGGAGTTACAAGTCAA ATATTAATAGCGTTAACAAAAACGGGGGGAGGTGATACGCCACAAATATC CGATACGGATGTCTTCGCAGTCCCAAACGAAGGGAGGAGTAAACGTGGTA TATTAATTGTATCTTTATGTGTTCCTGAAGACACAGGAGTAGCAAGGTTC CTTTTTTGTCCTGATAATAATCAATCAGCGCTCCACCAAATATCAGTAGA CGTCCGGTTCACTTTACGTAGCGCGAATGATAACCCAGTCGCCCTTGCGA CTAAGAGACAGTTAGCACGGCATAGCATAGCATGGGCACGATGAGGAGTA TGAGTAGCTCTATGACTAGAAGGCGCCGAAGATGTTGGCAATCTGAATTA AGACTTTTCCCCAGCTGAATCATAGGTTATTGCTTTTATTAAATCGAGAA GCTAACGATGCAGCAAGTACTCTTGTTATGATTAATAGTTAGAAGGGCTA AAACATTAGACTACTCAGTCACGTGACTTAGGTGGTCTAGAACTCTATAA TGTTTTAGCTCTTCTAACTAACAAAAAGACATGATTTAGGCGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig121:774385..780477-

>mRNA_F-serratus_M_contig121.1659.1 ID=mRNA_F-serratus_M_contig121.1659.1|Name=mRNA_F-serratus_M_contig121.1659.1|organism=Fucus serratus male|type=CDS|length=840bp|location=Sequence derived from alignment at F-serratus_M_contig121:774385..780477- (Fucus serratus male)
ATGAACCGCCTTGTAAAATGTGGAGTAGAAGCATTGAAGCCGCAGAAAAT
CAGGTCCTCTAAATGGCACTCGCCTCTGGTCTCTAGACGGAAAGCCAAGG
TCTTACGGAAGAAGGCGCTCAGGGACGGCTCGTACGGCACGCTTGTCATT
AACCAAGATGAACCGCCTTGTAAAATGTGGAGTAGAAGCATTGAAGCCGC
AGAAAATCAGGTCCTCTAAATGGCACTCGCCTCTGGTCTCTAGACGGAAA
GCCAAGGTCTTACGGAAGAAGGCGCTCAGGGACGGCTCGTACGGCACGCT
TGTCATTAACCAAGAGAACGGCAAGACTGTTGGCGGTTGGGATCCAGCAT
GGGACGTTTTCAAAGCGCCTGCTCCGCGACCCTTGAGGCCGCCGTTGCTG
CACAAGAATCAACAGAATAGGGCGAAGCGTGCAGAGAAGAGAACGGCAAG
ACTGTTGGCGGTTGGGATCCAGCATGGGACGTTTTCAAAGCGCCTGCTCC
GCGACCCTTGAGGCCGCCGTTGCTGCACAAGAATCAACAGAATAGGGCGA
AGCGTGCAGAGAAGATTACTGCTAAGCTGGGAGAGCAGGAGCAACGACTC
AAGGATCTGAACCGCGTAAGGGCCCTCCCCAAGCCCAAGCCAGAAGAAGG
TTTCTTGGCTTTATTGAATTGGGTCAAGACTGGTGGAAGACCAAAAGATT
AAATTACTGCTAAGCTGGGAGAGCAGGAGCAACGACTCAAGGATCTGAAC
CGCGTAAGGGCCCTCCCCAAGCCCAAGCCAGAAGAAGGTTTCTTGGCTTT
ATTGAATTGGGTCAAGACTGGTGGAAGACCAAAAGATTAA
back to top