mRNA_F-serratus_M_contig121.1655.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig121.1655.1
Unique NamemRNA_F-serratus_M_contig121.1655.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: D8LE03_ECTSI (PUA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE03_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 1.600e-102
Identity = 152/178 (85.39%), Postives = 163/178 (91.57%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            RFS+DDVSSSSQVKSSVQRG RAKL+EQFPN E YLEDILPKK N+T+AKCKDRVSLICCDGVPLFFQQRDG + PTLR LHKYPNMMPTM VDKGAISFVMNGANIMCQGFTSKGGRID  LEAG+ VCI+AEGKKVALAVG TTMST +I+ VNKG GV+NLH+LGDGLFGTKELD
Sbjct:    4 RFSKDDVSSSSQVKSSVQRGFRAKLLEQFPNSEPYLEDILPKKGNVTIAKCKDRVSLICCDGVPLFFQQRDGHIFPTLRILHKYPNMMPTMRVDKGAISFVMNGANIMCQGFTSKGGRIDTPLEAGAAVCILAEGKKVALAVGQTTMSTADIQSVNKGIGVDNLHYLGDGLFGTKELD 181
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A835Z9W5_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W5_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.830e-77
Identity = 120/179 (67.04%), Postives = 148/179 (82.68%), Query Frame = 1 
Query:    1 RFSQDD-VSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            RF+QD+ VSS+SQ+KSSVQR +RAKLIEQFP  E  L+DILPKK NIT+AKC ++VSLIC D   +FFQ+RDG + PTLR +H+YPN MP M VDKGAI F++NG+NIMC GFTS GGR++ S+EAG  VCIMAEGK+ ALA+G+T MSTDEIR  NKG GV+N+H+LGDGL+G  +LD
Sbjct:    4 RFTQDENVSSNSQIKSSVQRSMRAKLIEQFPLIEEVLDDILPKKGNITIAKCSNKVSLICRDNKIMFFQERDGPIFPTLRLVHQYPNFMPKMQVDKGAIKFILNGSNIMCPGFTSAGGRMEESIEAGQAVCIMAEGKQHALAIGLTVMSTDEIREQNKGIGVDNMHYLGDGLWGVPDLD 182
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A7S2Y120_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y120_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.820e-64
Identity = 107/178 (60.11%), Postives = 133/178 (74.72%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            RF+  ++SS+SQVKSSVQRGIRAK++EQ+P  E  +++ILPKK++  VA+C + V LIC  G PLFFQ RDG   P LR +H+YP   PTM VD GAI FVM GANIMC GFTSKGG I    EAG+ V IMAE KK ALAVGIT +ST+EIR   +G GV+N+H+L DGL+ T+ +D
Sbjct:    4 RFTNSEISSASQVKSSVQRGIRAKIVEQYPALEEEIDEILPKKSDFVVARCPNHVQLICHGGKPLFFQCRDGPFFPCLRLVHQYPGCWPTMQVDLGAIPFVMGGANIMCPGFTSKGGNIPQDYEAGTAVIIMAENKKQALAVGITKLSTEEIRKQKRGIGVDNVHYLNDGLWLTQTID 181
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: K3WJI9_GLOUD (PUA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJI9_GLOUD)

HSP 1 Score: 203 bits (516), Expect = 6.960e-62
Identity = 100/175 (57.14%), Postives = 134/175 (76.57%), Query Frame = 1 
Query:   10 QDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            +++VS+SS+VKSS QR IRAK++EQ+P  E YLEDI+PKKA + VAKC++ V ++  +G PLF+ QRDG   PTL+ LHK P++M  +  DKGAI FV++GAN+MC G TS GG +   LEAG+PV IMAEGK+ A+A+GI T+ST+EIR  NKG G+E +HFLGD L+G   +D
Sbjct:    8 EENVSTSSKVKSSQQRTIRAKILEQYPLVEPYLEDIMPKKAPMVVAKCQNHVQIVLHEGEPLFYNQRDGPFMPTLKLLHKIPHIMKQVRADKGAIPFVLSGANVMCPGLTSAGGELPEELEAGTPVAIMAEGKEHAMAIGILTLSTEEIRKQNKGIGIEMVHFLGDDLWGLAHID 182
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A9NLI5_PICSI (PUA domain-containing protein n=4 Tax=Pinidae TaxID=3313 RepID=A9NLI5_PICSI)

HSP 1 Score: 201 bits (510), Expect = 5.420e-61
Identity = 97/178 (54.49%), Postives = 133/178 (74.72%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            +FS +++SS +QVK+SVQR IR  + E++P+ E  LED+LPKK+ + VAKC++ ++LI  + VPLFF  RDG   PTLR LH+YPN+M  M VD+GAI FV+ GANIMC G TS GG +D  + A SPV +MAEGK+ ALA+G T MS  +I+ +NKG GV+N+H+L DGL+ T +L+
Sbjct:    4 KFSSEEISSQNQVKASVQRKIRQSIAEEYPDLEPVLEDLLPKKSPLIVAKCQNHINLILVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKMQVDRGAIKFVLAGANIMCPGLTSPGGALDDDIPAESPVAVMAEGKENALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKTVQLN 181
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BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A0A0LYF6_CUCSA (PUA domain-containing protein n=23 Tax=Pentapetalae TaxID=1437201 RepID=A0A0A0LYF6_CUCSA)

HSP 1 Score: 198 bits (503), Expect = 6.170e-60
Identity = 98/178 (55.06%), Postives = 130/178 (73.03%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            +FS +DVS+ +QVK+SVQR IR  + E++P  E  L+D+LPKKA + V KC++ ++L+  + VPLFF  RDG   PTLR LH+YPN+M  + VD+GAI FV+ GANIMC G TS GG +D  +EA +PV IMAEGK+ ALA+G T MS  EIR  NKG GV+N+H+L DGL+  + LD
Sbjct:    4 KFSTEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKAPLIVTKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGVLDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD 181
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A251KDD0_MANES (PUA domain-containing protein n=8 Tax=rosids TaxID=71275 RepID=A0A251KDD0_MANES)

HSP 1 Score: 197 bits (502), Expect = 8.740e-60
Identity = 96/178 (53.93%), Postives = 132/178 (74.16%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            +FS +DVSS +QVK+SVQR IR  + +++P  E  L+D+LPKK+ + VAKC++ ++L+  + VPLFF  RDG   PTLR LH+YPN+M  + VD+GAI FV+ GANIMC G TS GG +D  +EA +PV IMAEGK+ ALA+G T MS  +I+ +NKG GV+N+H+L DGL+  + LD
Sbjct:    4 KFSYEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVMVNSVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIRFVLAGANIMCPGLTSPGGALDEEVEAETPVAIMAEGKEHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLD 181
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A2I0J182_PUNGR (malignant T-cell-amplified sequence 1 homolog n=6 Tax=cellular organisms TaxID=131567 RepID=A0A2I0J182_PUNGR)

HSP 1 Score: 197 bits (501), Expect = 1.240e-59
Identity = 97/177 (54.80%), Postives = 131/177 (74.01%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKEL 531
            +FS +DVS+ +QVK+SVQR IR  + E++P  E  LED+LPKK+ + VAKC++ ++L+  + VPLFF  RDG   PTLR LH+YPN+M  + VD+GAI FV+ GANIMC G TS GG +D  +E+ +PV IMAEGK+ ALA+G T MS  +IR VNKG GV+N+H+L DGL+  + L
Sbjct:    4 KFSYEDVSAQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHLNLVLVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDKVESETPVAIMAEGKQHALAIGFTKMSAKDIRAVNKGIGVDNMHYLNDGLWKMERL 180
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A3N7FV13_POPTR (PUA domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A3N7FV13_POPTR)

HSP 1 Score: 197 bits (501), Expect = 1.940e-59
Identity = 95/178 (53.37%), Postives = 132/178 (74.16%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            RFS D+VSS +QVK+SVQR IR  + +++P  E  L+D+LPKK+ + V KC++ ++L+  + VPLFF  RDG   PTLR LH+YPN+M  + VD+GAI FV++GANIMC G TS GG +D  ++A +PV IMAEGK+ ALA+G T MS  +I+ +NKG GV+N+H+L DGL+  + LD
Sbjct:   18 RFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNLVVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGGALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERLD 195
[Close]
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Match: A0A2I4E969_JUGRE (malignant T-cell-amplified sequence 1 homolog n=2 Tax=fabids TaxID=91835 RepID=A0A2I4E969_JUGRE)

HSP 1 Score: 196 bits (499), Expect = 2.480e-59
Identity = 94/178 (52.81%), Postives = 132/178 (74.16%), Query Frame = 1 
Query:    1 RFSQDDVSSSSQVKSSVQRGIRAKLIEQFPNCEAYLEDILPKKANITVAKCKDRVSLICCDGVPLFFQQRDGLVCPTLRTLHKYPNMMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGKKVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD 534
            +FS ++VS+ +QVK+SVQR IR  + E++P  E  L+D+LPKK+ + VAKC++ ++L+  + VPLFF  RDG   PTLR LH+YPN+M  + VD+GAI FV+ GANIMC G TS GG +D  +E+ +PV IMAEGK+ ALA+G T MS  +I+ +NKG GV+N+H+L DGL+  + LD
Sbjct:    4 KFSSEEVSAQNQVKASVQRKIRQSIAEEYPGLEPVLDDLLPKKSPLIVAKCQNHLNLVLVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDIDVESETPVAIMAEGKEHALAIGFTKMSAKDIKAINKGIGVDNMHYLNDGLWKMERLD 181
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE03_ECTSI1.600e-10285.39PUA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9W5_9STRA1.830e-7767.04PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2Y120_9STRA1.820e-6460.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3WJI9_GLOUD6.960e-6257.14PUA domain-containing protein n=1 Tax=Globisporang... [more]
A9NLI5_PICSI5.420e-6154.49PUA domain-containing protein n=4 Tax=Pinidae TaxI... [more]
A0A0A0LYF6_CUCSA6.170e-6055.06PUA domain-containing protein n=23 Tax=Pentapetala... [more]
A0A251KDD0_MANES8.740e-6053.93PUA domain-containing protein n=8 Tax=rosids TaxID... [more]
A0A2I0J182_PUNGR1.240e-5954.80malignant T-cell-amplified sequence 1 homolog n=6 ... [more]
A0A3N7FV13_POPTR1.940e-5953.37PUA domain-containing protein n=7 Tax=Pentapetalae... [more]
A0A2I4E969_JUGRE2.480e-5952.81malignant T-cell-amplified sequence 1 homolog n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:671998..675493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score157.9
Seed ortholog evalue2.3e-36
Seed eggNOG ortholog2880.D8LE03
Preferred nameMCTS1
KEGG koko:K02883,ko:K07575
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0016020,GO:0016032,GO:0016043,GO:0019080,GO:0019081,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042127,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0075522,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1990904,GO:2000112
EggNOG free text desc.formation of translation preinitiation complex
EggNOG OGsCOG2016@1,KOG2523@2759
Ec32 ortholog descriptionPUA domain
Ec32 orthologEc-05_004570.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons5
Model size904
Cds size279
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929127.9488513-UTR-F-serratus_M_contig121:671997..6723641622929127.9488513-UTR-F-serratus_M_contig121:671997..672364Fucus serratus maleUTRF-serratus_M_contig121 671998..672364 -
1690962716.8292737-UTR-F-serratus_M_contig121:671997..6723641690962716.8292737-UTR-F-serratus_M_contig121:671997..672364Fucus serratus maleUTRF-serratus_M_contig121 671998..672364 -
1622929128.0133612-UTR-F-serratus_M_contig121:673492..6735001622929128.0133612-UTR-F-serratus_M_contig121:673492..673500Fucus serratus maleUTRF-serratus_M_contig121 673493..673500 -
1690962716.8748283-UTR-F-serratus_M_contig121:673492..6735001690962716.8748283-UTR-F-serratus_M_contig121:673492..673500Fucus serratus maleUTRF-serratus_M_contig121 673493..673500 -
1622929128.033256-UTR-F-serratus_M_contig121:674717..6748681622929128.033256-UTR-F-serratus_M_contig121:674717..674868Fucus serratus maleUTRF-serratus_M_contig121 674718..674868 -
1690962716.8840156-UTR-F-serratus_M_contig121:674717..6748681690962716.8840156-UTR-F-serratus_M_contig121:674717..674868Fucus serratus maleUTRF-serratus_M_contig121 674718..674868 -
1622929128.0510879-UTR-F-serratus_M_contig121:675394..6754931622929128.0510879-UTR-F-serratus_M_contig121:675394..675493Fucus serratus maleUTRF-serratus_M_contig121 675395..675493 -
1690962716.8996603-UTR-F-serratus_M_contig121:675394..6754931690962716.8996603-UTR-F-serratus_M_contig121:675394..675493Fucus serratus maleUTRF-serratus_M_contig121 675395..675493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929127.9653366-CDS-F-serratus_M_contig121:672364..6724461622929127.9653366-CDS-F-serratus_M_contig121:672364..672446Fucus serratus maleCDSF-serratus_M_contig121 672365..672446 -
1690962716.8465874-CDS-F-serratus_M_contig121:672364..6724461690962716.8465874-CDS-F-serratus_M_contig121:672364..672446Fucus serratus maleCDSF-serratus_M_contig121 672365..672446 -
1622929127.9793193-CDS-F-serratus_M_contig121:672658..6727261622929127.9793193-CDS-F-serratus_M_contig121:672658..672726Fucus serratus maleCDSF-serratus_M_contig121 672659..672726 -
1690962716.8580048-CDS-F-serratus_M_contig121:672658..6727261690962716.8580048-CDS-F-serratus_M_contig121:672658..672726Fucus serratus maleCDSF-serratus_M_contig121 672659..672726 -
1622929127.9968693-CDS-F-serratus_M_contig121:673363..6734921622929127.9968693-CDS-F-serratus_M_contig121:673363..673492Fucus serratus maleCDSF-serratus_M_contig121 673364..673492 -
1690962716.8665183-CDS-F-serratus_M_contig121:673363..6734921690962716.8665183-CDS-F-serratus_M_contig121:673363..673492Fucus serratus maleCDSF-serratus_M_contig121 673364..673492 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1655.1prot_F-serratus_M_contig121.1655.1Fucus serratus malepolypeptideF-serratus_M_contig121 672365..673492 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig121.1655.1

>prot_F-serratus_M_contig121.1655.1 ID=prot_F-serratus_M_contig121.1655.1|Name=mRNA_F-serratus_M_contig121.1655.1|organism=Fucus serratus male|type=polypeptide|length=93bp
MMPTMTVDKGAISFVMNGANIMCQGFTSKGGRIDCSLEAGSPVCIMAEGK
KVALAVGITTMSTDEIRGVNKGSGVENLHFLGDGLFGTKELD*
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mRNA from alignment at F-serratus_M_contig121:671998..675493-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig121.1655.1 ID=mRNA_F-serratus_M_contig121.1655.1|Name=mRNA_F-serratus_M_contig121.1655.1|organism=Fucus serratus male|type=mRNA|length=3496bp|location=Sequence derived from alignment at F-serratus_M_contig121:671998..675493- (Fucus serratus male)
AGATTCTCGCAGGATGACGTGTCCTCCTCCAGCCAGGTGAAATCCTCGGT
GCAGCGGGGCATTCGTGCGAAGCTTATCGAGCAGTTTCCCAACTGTGAGG
TGAGCGTTTTTGACCATCCCTCTCATGAACGAACCACCTCACAACCACCG
AACAGATCGAGCAACACCTACAGTTTTTTGTTTTGTTTATTGACAACGCA
GTGGCCAATATAGTTCTGGAATAACGCAGAACCGCATGCGCTCCCAGATG
GTGGCGTTTTACTTTGGTGGTGTCTATCTTGGACGTTACTCAGCTCCTCG
CTCTACACTCCTCCGTCATATCCTTCGTTATATTAGCAGTATGAAACCGT
GAAAATCGGTCGGAACGCATCGAGCGTTGGCTGAACGTCAATGACCGACT
TCTAGGCGGGGGTGCTAGCCCTGAACTCCCATGTGCTTTTTTCCTTCTCT
CTCTCTTTTTAAAACCCCACATATTTCCAGCGGAAACCCCCAGCCGGCAT
TATCTATAAAATCTGTCTCTTTTTTGTAGTGTCCAGAAGAAACCCGATAT
ATATACAAAAACGTTCATGCTAAAATAATACAGTATACCACAACAAGCCG
ACGCGCCTCCTGCCAACTGGCGCAGGCTTACCTGGAGGACATCCTACCCA
AGAAAGCCAACATCACCGTAGCAAAGTGCAAGGATCGCGTGTCGCTCATC
TGCTGCGACGGAGTGCCGCTGTTCTTTCAGCAGCGGGACGGTCTCGTCTG
TCCCACGTTGCGGACTCTTCACAAGTGTGAGTAGGCGTCCGTGCCTTCAC
TTTTCACCAAGCAGGCTTTTACGGAGGCGTTACGGTCGTGCGGGGGTTTC
GTGGCGCGAGCGGAGGACGTCTGGCCGGAAGCGAAAGCTTGGCTACCGCC
GAATGAATCTGGAGGTAGCACGGTCTTTACACAATGTAACGCTAAAACTC
TCTAGCAAAACCCTTAAATTGACTATTGATATACCAGGTACCTGGTAAGT
TGTAGCAAGAGCTATTGCGAGGTGGTGTTGAGGTGAACGATACGCGTAGA
TTTCGCACACACTCAGGTTGGATGTGAAAGAGAAGCGTAGCTCTGTGGAC
GTATGCTGCGGTGGCTCCGTTTCTCGCTTCCCAAGGTCTCCTCTGCTGTT
CTGTCTTGTCTTGATATGGGCTGTTCACACAAAAAAAACGTGTATCATCG
TGTGAGCCTCGGTGAACAACTTGAGTGATGTCGTCAAAGAGTCTTTAGTT
CTATGTGGAAAGTCAAGTACTTTTGGCGTGAAGCTATATCCGTCTGCCGT
CGTCGTCATGCGAAAATGCTGCGGTTGAGCTCTCGTGCGGCGGCATCGCG
CTGCTTTGCTTCTCGGCCATCGATCCTATTAATAGTCTCCGAGGGGTGGT
CAAGCCCCGCAAGCTTTCACAGCGTGGGTTTGAACCTACGAGGGCAAAAT
AAGAGGGGCGGAAAGCGTCGAGTACAATCACGAATCGGTCTTTTATCTCT
ACAAGTACGCTTTTTGAGAAACGACTTGCAGAGGGGCTCGAGACGTCGAG
AGAGATGATTTTTCAACTCCATATGCAAAGGAAGAAAAAAAAAGAGAGTT
CTCGAGACAGCGAGAATTCGAGTTCAGAAAGGGATCCGCGGGGGGGGGGG
GGGGGATCTTTCGATCGTCAACCGGAGAGGCCATCGCTTCTTCCTCCGAG
CGGCAACGCGGGAACTCTCCGCCGTTACGATATTTTTGGGGGAGGAACAA
AAAGGGAAACGAAACGAACGAAATTCATGCGTGTAGTTCCTACCAGGTAG
TATTTATATAGCGTCTAATATTCCACGAGCGGGATTGGCCACCGTGTAAA
GTAGTTTTTTCTTTTTTTCCGGTTGGCAACCATTCCATTACGGCTGAATG
TGAAAAACAAGAACAACAACAACGACATCAATAATGTGTCTCGTGCTTGT
TTCTGCTATCCTCTTGTTCTCCTTTGGTGATGGTTCGTTTCAGATCCCAA
CATGATGCCAACGATGACTGTCGACAAGGGAGCGATCAGCTTCGTCATGA
ACGGGGCCAATATCATGTGCCAGGGTTTCACTTCCAAGGGAGGCAGAATA
GACTGCTCTCTGGAAGCGGGCAGCCCTGTAGTGAGTGGGGTCGGTCCAAA
ACCTCTGTAAAGTCTAGAGCTGTACCCCTTCGAGAAGGAAGTTAACACCA
ATGATTTTGAACTCGTGTCGGAGTTTTTTTAAGCGCGGAATGGTTGTGCG
GTATGTGGGGGGTCGGTAACCTAGCGTGTTGATTGGTTCCCCCCGGCAGG
GCACAACTGCTAACAGTAAAAAAAAAACGTGTAACACGTTACGAGCCCCG
CATCATCACAAGCGTCGAGCGAATTCCGCTCTATTTAGAGGAGATTTTGT
CCTCCTGAAGCGTGATAACGTGGCCATTTGGTTAAAAATAGTTTCAGCAT
CTTCTCGTAAAGTTTTCATTTTGGAGTCCATGTTCGGTGGGCGCGAGGTT
GCACCGCTCTCTCTCCCCCCTTGAATATTTCATGTTATATCCAATACATT
AGTAGAGTGCGGCCATTGCACAAGCAAGACAAGATTCGTGTTGATCGTCT
GGGCCAGCCAACACGCGCGCTCAAATCATTTTTTTCGCGTCTCGTTTCGT
ATCATGTGGCTCTATAATAGCGCTCTATATAACCCTACACTCCGATGACC
ACGAGGATTCCAAATTTTCCAATCTCCCCACGAACGACACTTTCCTTCGT
GTTCTGCCACAACACAGTGCATCATGGCCGAGGGAAAGAAGGTTGCTCTG
GCGGTAGGAATCACCACCATGTCGACCGACGAGATGTGAGTCAGGCCTGT
TGCGGGGCGGGGCGTCCGTTTGTGTTGAAGAGCGAGTACGTTGCCGTGCA
GCAGCTATCATAGCAGTGGTGGCAACGAGCAGCCCGCGGGCCTCGATTCA
TCTCCGCACGAACAAACAAACCCGCCGGACCTCGCGACAGAACCAACCTT
TAATCACGCCTCTTTCTGCTCGAAACCCTCGCTATGTGCTGCGGCAGCCG
AGGAGTTAACAAAGGTAGCGGAGTGGAGAATCTGCACTTCCTGGGGGATG
GGCTGTTCGGCACGAAGGAACTAGACTGAAGAAAATTTGCGGGCCATTCA
TTCGTGTAACGAGTACGAGGCGACGCCCCGTCGGGATGTCTAGTGTCGGA
CTTTTTCGCCTCTTTCAGATAAAAAAGTGGCTTTTGACCAATAGAAGTCT
GCAAAACGCTCGACTAGCTATTATAAGGTACAGTGCCAAATAAGGTACAG
TACCTAGTAAATCGTATGGTTGTTGTATTATAGGAGGTTTAGCGTTTGGT
CGGGTCTACGAAGGCCTGTATACAGTACTATTTAGCACGAATCAGTGTCA
CTCGCTAGCTGCTCACGAGTTAAAAGAAAAAAACATGAACGCATCCAAAC
CTTCTAAGCACCCCCCAGACAGAGAGAAAAAACGTCAAGACGTTTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig121:671998..675493-

>mRNA_F-serratus_M_contig121.1655.1 ID=mRNA_F-serratus_M_contig121.1655.1|Name=mRNA_F-serratus_M_contig121.1655.1|organism=Fucus serratus male|type=CDS|length=558bp|location=Sequence derived from alignment at F-serratus_M_contig121:671998..675493- (Fucus serratus male)
ATGATGCCAACGATGACTGTCGACAAGGGAGCGATCAGCTTCGTCATGAA
CGGGGCCAATATCATGTGCCAGGGTTTCACTTCCAAGGGAGGCAGAATAG
ACTGCTCTCTGGAAGCGGGCAGCCCTGTAATGATGCCAACGATGACTGTC
GACAAGGGAGCGATCAGCTTCGTCATGAACGGGGCCAATATCATGTGCCA
GGGTTTCACTTCCAAGGGAGGCAGAATAGACTGCTCTCTGGAAGCGGGCA
GCCCTGTATGCATCATGGCCGAGGGAAAGAAGGTTGCTCTGGCGGTAGGA
ATCACCACCATGTCGACCGACGAGATTGCATCATGGCCGAGGGAAAGAAG
GTTGCTCTGGCGGTAGGAATCACCACCATGTCGACCGACGAGATCCGAGG
AGTTAACAAAGGTAGCGGAGTGGAGAATCTGCACTTCCTGGGGGATGGGC
TGTTCGGCACGAAGGAACTAGACTGACCGAGGAGTTAACAAAGGTAGCGG
AGTGGAGAATCTGCACTTCCTGGGGGATGGGCTGTTCGGCACGAAGGAAC
TAGACTGA
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