mRNA_F-serratus_M_contig121.1650.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig121.1650.1
Unique NamemRNA_F-serratus_M_contig121.1650.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: D8LE38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE38_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 1.590e-94
Identity = 142/223 (63.68%), Postives = 169/223 (75.78%), Query Frame = 3
Query:  582 VGARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            +  R EVA  P  FP RYLRGEVPCSK+CSA +AL+WVCPLEQLDY+YYLPMFFDGIRCLEEPC TLARQ                GV DLLSA RG P+RILPSLP +++A+R+AI C NP ++IF C A+++LA GN++VGEALV YYK+FL + N F+N TKSTGD+IDYGQR        N+ D+GEAV+  VETLERNGGK AFA IKHCIPTYQ+C+
Sbjct:    8 LSVRDEVAAVPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQ----------------GVSDLLSAARGYPQRILPSLPNIMRALRVAISCKNPGVIIFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQR--------NSQDVGEAVSCTVETLERNGGKHAFAHIKHCIPTYQTCV 206          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A6S9H4I7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H4I7_HETAK)

HSP 1 Score: 226 bits (576), Expect = 2.180e-66
Identity = 141/383 (36.81%), Postives = 206/383 (53.79%), Query Frame = 3
Query:  108 GAPGLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVRE-GLSGHLPRDKVQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            G  G+ +L++++KLL+QQ++++D +  ++ NV+EKKR    AQ  ++   +               GS N +N  + P       + RA +  +R+ G S  LP   +Q +        FK G   D + K+H L   +  MER    +   R       GA +   +   +FP RY RGE+PCS ++ +A  AL WVCPL+ LDYD+YLP+FFDGIR  E+P K LARQ                GV +LL A RG PER+LP LP VV  +R A+   +P +L+   G ++EL G N  VGEALV YY+  L ++N F+   ++ GD +DYGQR+          D+   V   +E LER GG  AFA IK+ +PTY++C+
Sbjct:    7 GGAGIMELRMKKKLLEQQIAVLDSRAGKITNVLEKKR----AQKMRDQRAL---------------GSDNSSNQSKPPPSQ----LSRAGSSSMRQLGGSSSLPDLGIQART-------FKSGSTADRVRKQHLLNQYKTNMERESRKKEEARRRVPPKAGAFRRKEVPKTLFPVRYNRGELPCSVEHTAAGYALTWVCPLQTLDYDHYLPIFFDGIRATEQPYKFLARQ----------------GVRELLEAARGYPERVLPCLPEVVAGLRRALDTRDPPVLLAALGCVEELVGCNAGVGEALVPYYRQLLSVMNLFLAKRENLGDAMDYGQRRG--------EDLAARVGEVLEALERTGGPDAFANIKYSVPTYETCM 335          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S2Y192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y192_9STRA)

HSP 1 Score: 208 bits (530), Expect = 6.960e-59
Identity = 141/406 (34.73%), Postives = 208/406 (51.23%), Query Frame = 3
Query:  117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQH-----------TKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDK-------------VQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGA---RKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            G+ +L+L++KL++QQL++++    +V+NV+EKKR  KL +              +    Q   S    E   GG S   T  R         G+R  + I  R  + G   RD+              Q     +AP   K G   D + KK  L+   + ++R    E R+R     P  A   R+       +FP RY RGE+PCS ++ S+  AL+W+CPL+ LDY++YLPMFF+GIRC E+P K +A Q                GV +LL A +G PERILP+LP VVK +R+A++   P+++I     IQ L   N  +GEA+V YY+  L + N F    ++ GD +DYGQR+          DI   +   +E LER GG+ +FA IK+ +PTY+SC+
Sbjct:   20 GIMELRLQKKLMEQQLAVLNMNEAKVSNVLEKKRAKKLREKRGVAGGGNSWGNADGLAGQRSVSATQLELGVGGNSFGGTG-RXXXXXGPMGGMRDVSPIDGRHQMGGSQTRDQHNEVHGHHPXXXXXQVDHHRIAPRTIKPGSDADRVRKKFLLRQAGQTLKR----EERERRPGPRPPKAGAYRRANEQGEILFPIRYKRGELPCSIEHKSSGYALLWICPLQTLDYEHYLPMFFEGIRCTEDPYKYMASQ----------------GVMELLDASKGYPERILPTLPEVVKYLRMALMSKLPDIIITALRCIQSLVLCNVGIGEAMVPYYRQLLSVFNLFRGKRRNLGDGMDYGQRKG--------DDINSVIDETLEVLERTGGEDSFANIKYMVPTYESCL 396          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A835YJW5_9STRA (Parkin co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW5_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.180e-53
Identity = 133/386 (34.46%), Postives = 189/386 (48.96%), Query Frame = 3
Query:  117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDKVQRQQDLLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPV-----GARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTT---KSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            G+ +LQLR+KLLQQQL LV  K  R+  V+EKK  A+   H + A  +   ++T                P R+P  +   G+  A+          H    ++   Q       F  G  ID+  K+  ++  + E E  KA  R   +    PV              P  FPGRY  G++PCS + S    L+WVCPL+QLDY YYLP+F DGIRC  +PCK LARQ                G+ DLLSA  G+PER++P L  +  A+R A L ++ EL+ +TC  ++ L G   +VG ALV +YK FL LLN  +N      + G  I + ++           D+   +   ++ LER+GG   FA IKH +PTY +C+
Sbjct:   12 GICELQLRKKLLQQQLELVSNKCNRMTAVLEKKGEAQARGHDRGADPLSHPKNT----------------PARRPR-NTFYGLEHASTHDAH-----HTAAARIGGAQT------FPPGSVIDNSRKRELIRKARHEWEHDKAA-REAAAAAKAPVQXXXXXXXXXXXATPSRFPGRYAMGDIPCSID-SGDGVLVWVCPLQQLDYHYYLPLFLDGIRCTADPCKMLARQ----------------GLLDLLSAATGTPERVVPLLKDIAMALRNACLTDSQELVAYTCKVLETLVGIGPEVGLALVPHYKAFLSLLNKHINDAPLKNAQGKEIGHNRKL----------DLSVLIEETLQMLERSGGSGVFAVIKHAVPTYMTCL 341          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S1TRG1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRG1_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.960e-49
Identity = 123/383 (32.11%), Postives = 197/383 (51.44%), Query Frame = 3
Query:  117 GLYKLQLRRKLLQQQLSLVDGKYKRVANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKPEIDCAVGIRRANAIGVREGLSGHLPRDKVQRQQDL----LAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            GLY L+L+++LL+QQL ++D +  R+ N ++ KR       T++ +  Q G  +    K     ++     +R+ E      +R  N +             K Q    L    +AP P   GG +D I K+  ++  +  ++      RR+R+    P   R ++ +  P+F GRY RGE+P + ++ +    L WVCPL+ LDY+YYLP+FF+GIRC  +P + LARQ                GV +LL A RG PER+LP L ++V  +R A++ ++ ++LI     +Q+L   N  VGEA+V YY+ FL       +  ++ GD +DY QR+ +        DI       ++ L++ GG  A+A IK  IPTY+SC+
Sbjct:    4 GLYDLKLKKRLLKQQLEVLDVREARI-NEIKMKR-------TQQRSSPQGGRGSPARLKPLDLEARRSRLLQRRQEAGQTAALRDFNRM-------------KPQASSSLAVYTMAPAPILPGGNMDRIRKRDAVRRTKLRLQGEAV--RRERANRKPPKPKRVDMKLTEPLFVGRYTRGELPATLEHRTNGYGLSWVCPLQSLDYEYYLPIFFEGIRCQRDPYRFLARQ----------------GVLELLDASRGYPERVLPYLESIVVPLRDAVVTHDEDVLIAVLMILQKLVTCNPGVGEAIVPYYRQFLAAFKRHYSHGENLGDGMDYKQRKGIT-------DICTMTAETLQLLQKTGGPDAYANIKWLIPTYESCL 340          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S2FEA0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEA0_9STRA)

HSP 1 Score: 177 bits (450), Expect = 8.000e-49
Identity = 101/269 (37.55%), Postives = 149/269 (55.39%), Query Frame = 3
Query:  444 LLAPTPFKKGGRIDHINKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSC 1247
            L  P  F +  R+  I K++ L    R+ E   + +R          GA ++  +   +FP RY RGE+PC+ ++ S+ N L WVCPL  LDY++YLP+F DGIRC E P   LARQ                G ++LL   +G P+R++P +P ++K +RLA+  N+P++++     ++EL   N  VGEALV YY+  L +LN F+    + GD IDY Q       F  N D+  A+   +E LE+NGG  AF  IK+ +PTY+SC
Sbjct:   16 LREPELFPESSRVSIIRKRNIL----RQAEMDLSSQREVLPPPKPKAGAYRKKDVPTTLFPIRYKRGELPCAIEHRSSANGLSWVCPLHNLDYEHYLPIFVDGIRCTENPYCFLARQ----------------GCHELLEGAQGYPDRVIPCIPELIKPLRLALTTNHPDIILAALTFLKELVLCNYGVGEALVPYYRQLLSVLNLFLTKRTNIGDAIDYSQ-------FKGN-DMSTAIMETLEVLEKNGGSNAFINIKYMVPTYESC 256          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: F0Y431_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y431_AURAN)

HSP 1 Score: 167 bits (424), Expect = 2.220e-45
Identity = 90/234 (38.46%), Postives = 135/234 (57.69%), Query Frame = 3
Query:  555 RQRSTHLHPV-GARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            R+R     PV G  ++  ++  +FP RY RGE+PCS ++  + N L W+CPL QLDY++YLP+F DGIRC E P + +ARQ                G  +L+   +G P+ +LP LP ++K IRLA+   +P+++     A+Q++   N  VGEALV +Y+  L ++N F    ++ GD I YGQR+          D+G AV   +E LE+ GG  AF  IK+ +P Y+SC+
Sbjct:   19 RERRPFKGPVAGVFRKTKVEATMFPIRYRRGELPCSIEHRGSGNNLSWICPLLQLDYEHYLPIFLDGIRCTESPYQFVARQ----------------GFDELIEEAKGFPDCVLPCLPDLIKPIRLALNTKDPDIVHAALRALQKIVLSNYGVGEALVPFYRQLLSVMNLFFTKRQNLGDAIFYGQRKGT--------DLGTAVLETLELLEKTGGPNAFVNIKYMVPAYESCV 228          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A7S4ED43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED43_9STRA)

HSP 1 Score: 162 bits (410), Expect = 9.350e-42
Identity = 84/223 (37.67%), Postives = 129/223 (57.85%), Query Frame = 3
Query:  585 GARKEVAIDPPVFPGRYLRGEVPCSKNCSAV-NALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            G  ++  ++  VFP RY RGE+PC+    A  N L W CPL QLDY++YLP+F DGIRC +   K +ARQ                G  +++   +G P+ +LP +PA++K IRLA+  ++P++++    A+Q++   N  VGEA+V +Y+  L+ +N F    ++ GD+I YGQR+          D+G AV   +E LE+ GG  AF  IK  +P Y+SC+
Sbjct:  170 GVFRKQKVEETVFPTRYERGELPCAIEHGACHNTLSWACPLLQLDYEHYLPIFLDGIRCTDARYKFVARQ----------------GFDEMIEEAKGFPDCVLPVVPALIKPIRLALATHDPDIVVAGLNALQKVVLSNYGVGEAMVPFYRQLLQPMNLFYTKRQNIGDQIFYGQRKGT--------DLGTAVLETLELLEKTGGPNAFVNIKSYVPVYESCM 368          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A482SS01_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS01_9ARCH)

HSP 1 Score: 154 bits (389), Expect = 3.650e-39
Identity = 93/262 (35.50%), Postives = 144/262 (54.96%), Query Frame = 3
Query:  480 IDHINKKHTLQNKQRE----MERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLRGEVPCS-KNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
            I  I + H ++ K R+    M +HKA E R +     P   R E+ I P + P RY RGE+PC+ ++ ++   L W CPLE LDY+YYLP+FFDG++C +     +ARQ                G+ D+L A RG PERI+P L  + + +R A+   + E+L+    ++++L   N +VG  L++Y + FL  +  F++  K TGD+IDYGQR+        N D+GE +   +E +E +GG  A   IK  +P  +S +
Sbjct:   90 ILRIRQNHGIRTKGRDEIRNMIKHKAEEERIKEEKNKPR-TRPEIKIPPSMLPNRYKRGELPCTIEHGTSGLYLSWACPLENLDYEYYLPLFFDGLQCKDHITSFIARQ----------------GIEDMLYASRGHPERIIPVLHLLARPLRNALAKFDEEILLPVLKSLEQLILSNAEVGAELLKYGRQFLVPIAYFMDKNKHTGDKIDYGQRR--------NDDVGEQIRRVLELMEEHGGPRALQLIKFSVPLCKSSL 326          
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Match: A0A0M9GB55_9TRYP (Putative mitochondrial PACRGB n=2 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9GB55_9TRYP)

HSP 1 Score: 144 bits (364), Expect = 1.060e-35
Identity = 82/223 (36.77%), Postives = 118/223 (52.91%), Query Frame = 3
Query:  582 VGARKEVAIDPPVFPGRYLRGEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCNNPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDRIDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQSCI 1250
             GA  +  I P  F   Y RG++P S   +A   L+W   + +LDY +YLP+FFDG+R LEEP   +A Q                G  DLL        +ILP++P ++  ++ A+   +P++L      IQ+L    + VGEALV YY+  L + N F N TK+ GDR+DYGQR        N+ D+   +   +  LER GG  A+  IK+ IPTY+SC+
Sbjct:  123 AGAYAKQRIPPTEFRHHYERGDLPLSVQHAAKRTLMWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAHQ----------------GSLDLLE---NGGAKILPTVPQIIMPLKTALNTRHPDVLRKVFHVIQKLVVSGDHVGEALVPYYRQLLPVFNLFKNRTKNMGDRMDYGQR--------NSQDLSSLINDTLYLLERYGGPDAYINIKYMIPTYESCV 318          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE38_ECTSI1.590e-9463.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S9H4I7_HETAK2.180e-6636.81Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y192_9STRA6.960e-5934.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YJW5_9STRA1.180e-5334.46Parkin co-regulated protein-domain-containing prot... [more]
A0A7S1TRG1_9STRA1.960e-4932.11Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2FEA0_9STRA8.000e-4937.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0Y431_AURAN2.220e-4538.46Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4ED43_9STRA9.350e-4237.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482SS01_9ARCH3.650e-3935.50Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A0M9GB55_9TRYP1.060e-3536.77Putative mitochondrial PACRGB n=2 Tax=Leptomonas p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:590581..593737 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.0
Seed ortholog evalue1.4e-77
Seed eggNOG ortholog2880.D8LE38
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of cell death
EggNOG OGsKOG3961@1,KOG3961@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-05_004190.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1476
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1650.1prot_F-serratus_M_contig121.1650.1Fucus serratus malepolypeptideF-serratus_M_contig121 590622..593517 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929126.9922287-UTR-F-serratus_M_contig121:590580..5906211622929126.9922287-UTR-F-serratus_M_contig121:590580..590621Fucus serratus maleUTRF-serratus_M_contig121 590581..590621 +
1690962716.29691-UTR-F-serratus_M_contig121:590580..5906211690962716.29691-UTR-F-serratus_M_contig121:590580..590621Fucus serratus maleUTRF-serratus_M_contig121 590581..590621 +
1622929127.0990915-UTR-F-serratus_M_contig121:593517..5937371622929127.0990915-UTR-F-serratus_M_contig121:593517..593737Fucus serratus maleUTRF-serratus_M_contig121 593518..593737 +
1690962716.3669758-UTR-F-serratus_M_contig121:593517..5937371690962716.3669758-UTR-F-serratus_M_contig121:593517..593737Fucus serratus maleUTRF-serratus_M_contig121 593518..593737 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929127.0077662-CDS-F-serratus_M_contig121:590621..5912551622929127.0077662-CDS-F-serratus_M_contig121:590621..591255Fucus serratus maleCDSF-serratus_M_contig121 590622..591255 +
1690962716.3107407-CDS-F-serratus_M_contig121:590621..5912551690962716.3107407-CDS-F-serratus_M_contig121:590621..591255Fucus serratus maleCDSF-serratus_M_contig121 590622..591255 +
1622929127.024715-CDS-F-serratus_M_contig121:591736..5919001622929127.024715-CDS-F-serratus_M_contig121:591736..591900Fucus serratus maleCDSF-serratus_M_contig121 591737..591900 +
1690962716.320475-CDS-F-serratus_M_contig121:591736..5919001690962716.320475-CDS-F-serratus_M_contig121:591736..591900Fucus serratus maleCDSF-serratus_M_contig121 591737..591900 +
1622929127.0379605-CDS-F-serratus_M_contig121:592075..5922401622929127.0379605-CDS-F-serratus_M_contig121:592075..592240Fucus serratus maleCDSF-serratus_M_contig121 592076..592240 +
1690962716.3297544-CDS-F-serratus_M_contig121:592075..5922401690962716.3297544-CDS-F-serratus_M_contig121:592075..592240Fucus serratus maleCDSF-serratus_M_contig121 592076..592240 +
1622929127.0549252-CDS-F-serratus_M_contig121:592831..5929591622929127.0549252-CDS-F-serratus_M_contig121:592831..592959Fucus serratus maleCDSF-serratus_M_contig121 592832..592959 +
1690962716.3426983-CDS-F-serratus_M_contig121:592831..5929591690962716.3426983-CDS-F-serratus_M_contig121:592831..592959Fucus serratus maleCDSF-serratus_M_contig121 592832..592959 +
1622929127.0720155-CDS-F-serratus_M_contig121:593076..5931801622929127.0720155-CDS-F-serratus_M_contig121:593076..593180Fucus serratus maleCDSF-serratus_M_contig121 593077..593180 +
1690962716.3515904-CDS-F-serratus_M_contig121:593076..5931801690962716.3515904-CDS-F-serratus_M_contig121:593076..593180Fucus serratus maleCDSF-serratus_M_contig121 593077..593180 +
1622929127.0859709-CDS-F-serratus_M_contig121:593497..5935171622929127.0859709-CDS-F-serratus_M_contig121:593497..593517Fucus serratus maleCDSF-serratus_M_contig121 593498..593517 +
1690962716.3594408-CDS-F-serratus_M_contig121:593497..5935171690962716.3594408-CDS-F-serratus_M_contig121:593497..593517Fucus serratus maleCDSF-serratus_M_contig121 593498..593517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig121.1650.1

>prot_F-serratus_M_contig121.1650.1 ID=prot_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=polypeptide|length=405bp
MPSSVACKHMPVPNTDGVCNCDGAPGLYKLQLRRKLLQQQLSLVDGKYKR
VANVVEKKRLAKLAQHTKEATVIQEGESTKTAEKCTGGGSKNFTNPRRKP
EIDCAVGIRRANAIGVREGLSGHLPRDKVQRQQDLLAPTPFKKGGRIDHI
NKKHTLQNKQREMERHKALERRQRSTHLHPVGARKEVAIDPPVFPGRYLR
GEVPCSKNCSAVNALIWVCPLEQLDYDYYLPMFFDGIRCLEEPCKTLARQ
ASPRRPSADENQCESSGVYDLLSAVRGSPERILPSLPAVVKAIRLAILCN
NPELLIFTCGAIQELAGGNEKVGEALVRYYKLFLKLLNSFVNTTKSTGDR
IDYGQRQAVRAAFVNNHDIGEAVTTAVETLERNGGKTAFAQIKHCIPTYQ
SCIN*
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mRNA from alignment at F-serratus_M_contig121:590581..593737+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig121.1650.1 ID=mRNA_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=mRNA|length=3157bp|location=Sequence derived from alignment at F-serratus_M_contig121:590581..593737+ (Fucus serratus male)
ACAGTTCCCACATCACATACATACGCACGTGTGAACCTCTCATGCCAAGC TCAGTGGCGTGCAAGCACATGCCTGTACCGAATACAGACGGGGTTTGTAA TTGCGACGGTGCTCCGGGACTCTACAAGCTTCAGCTACGGCGTAAACTGC TACAACAACAGCTAAGTCTCGTCGATGGCAAGTACAAGCGCGTTGCGAAT GTCGTTGAGAAGAAACGCTTGGCGAAGCTTGCACAGCATACCAAAGAAGC CACGGTGATCCAAGAGGGTGAAAGCACAAAAACAGCTGAAAAATGTACTG GTGGAGGGTCGAAGAATTTCACCAACCCACGTAGAAAGCCTGAAATCGAT TGTGCTGTCGGCATCCGCCGAGCGAATGCTATCGGCGTGAGGGAGGGCTT ATCGGGCCACCTTCCCCGTGATAAGGTACAGCGGCAACAAGATCTGCTGG CTCCGACACCCTTCAAAAAAGGCGGCCGCATTGACCATATCAACAAAAAA CACACATTACAGAACAAGCAACGGGAAATGGAGCGACATAAAGCGTTGGA GCGACGACAGCGGTCGACTCATCTCCACCCAGTCGGTGCCCGAAAGGAGG TGGCTATCGATCCACCGGTCTTCCCCGGTCGGTATCTACGAGGAGAGGTG CCGTGTTCGAAGAATTGTTCAGCAGGTGAGATAATCATGCATGGCGTATG CTGAGACTACACGCTTGTCCCCTCGATCAAAATGCTTCTAGTCGGAGGGG ATGTAGGATGTAGTTTCGAGGAAGCTACGAGTATAAGTCTGAAAGAGCGT CTGCTAATCTGGATTTTATGTTTCGATTGATGGGCTCGCGTAGTGTCTTG CGAAGAAGATGTCAAGCGTTCACCATACAACGTAAACCTCACAATTGACA ACAACACGAGTATCCCTAGACGGCAACTGCTCATCGGCCATTTATCGCGC CAGTGGTACGAACAAGTAGAGCGGTCTCGCCCGCTTCAATTTCCTGCTGC ATGTGGGCCCGTGGAACTTGATCGATTTGCGGTGCCACAGCCACATTTCT CTCGCGTTGTCCCCTCCTACTGTATCTCACATGCAACTTGCTTCGGTACG CGTACGTGTTGCATCACGCTAACCCGTACCCCCCCAAAAAAACACTCCGC GTGCAGTGAATGCGTTAATCTGGGTGTGTCCTCTAGAACAGCTGGACTAC GATTACTACCTCCCAATGTTCTTCGATGGCATCCGCTGCCTCGAAGAACC ATGCAAGACGCTTGCAAGACAGGCAAGCCCTCGTCGTCCCAGTGCAGACG AGAATCAGTGCGAATCTTCAGTCGACGTGTGCCCGTGGACGCAACTCTAC ATGTGCTACAGCAACCTGTTTAGACTATGGCGTAGATTTACAAGGTCCCA AAACGGCACGTCCTGTTCCTCGAGCCGTAAACATCTCACTCAGGTGCCAC TCCGGGTCACGTCGCGCATTGTAACTCCTCGATTGCCTTTTCCAGGGGGT GTACGATCTCTTGAGCGCAGTAAGAGGTTCCCCGGAGCGCATCTTGCCGT CCCTTCCTGCCGTCGTGAAAGCGATCCGCTTGGCGATATTGTGCAATAAT CCAGAGCTTCTCATCTTCACGTGTGGCGCCATTCAGGAGCTCGCCGGCGG AAACGAGAAGGTGAGGGCGACGTTGTCCTTGCCATGCACTCTATGCGAGT ACGGTATTTCAACATTCTAGGATTAATACCTCTCGACGGGGGGTTTCTCG TAGAAACTACGTGTAAGCGCGAGCTAAAAAAAAACACCATCGGACCCGCA AAAAATTTCGTCAAACTAAAAATCCCTATTCCCCTAGAACGCTCGTAACG GGCTCTACCAGTCCCACTGCCACGTAGACTGTGTTGTTGAGAAAGTGCAT GATGTCGAAGGAGTGGGAGGTTGAGGGGGGGAGGGATACCGGAGAAGCGT GAAAACCGTTCGCATCCGATTCCAGGAACAAGATCCTCCCAAAATACGCG GGGATCGCGGAGAATGCATGATCACTGCTGTACCCGTGAGGAGCCTAGCC ACGCATGCTGTCTAGTATACCCAGACGCCATCAAGGCTCATAATCGACGC TGGCGAGGATGCTAGAGGGGGGCTCTTACCAAGATTTGAAGCAATCGAAA CTAATACTGTATGTAGTAAAGGTGGATAGAATGAATCATACGGCGGCTTG ATCTCGAGCGCCGGATTTTGCTCGTTCCGCAACGGAGCGCTTTCACCGCA GGTAGGGGAGGCCCTCGTGAGGTACTACAAGTTGTTTCTGAAACTGCTCA ACTCCTTCGTCAACACCACCAAGAGCACCGGAGACAGGATTGACTATGGA CAAAGGCAAGCGGTTAGAGCCGCATTTGTGTGTTGCAGTCTTTGGAGTAA ACCATGCGTACTCTGTAACAACTTAGGGCGAACGTGAGCCTGTGTTAGGC CACAAAATAAAAGTCAGCTTCTATCGGTTTTTCTTGGTGTTCTCAGGAAC AACCACGACATCGGCGAAGCGGTCACGACCGCCGTGGAGACGCTAGAACG CAACGGCGGCAAAACCGCCTTCGCCCAAATCAAGCACTGCATCCCAACGT GTAAGTGTACAAGACACTAAGGGCGTAACGTCTGTGGTGGTATATGTTTC GAGCGCCGAGTTCAGGATGATGGTGTTTCGAGTTCGTAGTGGGCGGCGAT AAACCAGCCGATTCGCAAGTCACGCAAACCCACATGTCCGCCTTTTCACT TCTCGATAACAATTTGTCCTTTCGGCGTGCCTTCGCCGTCTGAGCACTGC GCATTCGGGCCCTGCTGGGACAGTTGCTGCTTACAAAGTCCAAACAGACT GCAGCCAAATAGATGACGAACCGCTTCGTACCTGCTCCCTCCATCCGAAT ACTGCTGTCTCTAAAAGATCAATCCTGCATCAACTGAGACGCGGCTTTGA CAGCATCGTACGAGTAGAAGTGCTTTTGGGGTCGTCAAGTTCGGACTACA ACATGCTCCTCCACTATTAATAGTGCACGTGCGCGCGTGTGTGTGAGTCG TCACAAGACAAAGCACAATCGACGGGGTTCGACCGCCGCGGGTGCGTGGC GAGCTAAATGGCGGGGCCGGAACAAGGAGACAGGAATAACTAAATCAACG TTGCATG
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Coding sequence (CDS) from alignment at F-serratus_M_contig121:590581..593737+

>mRNA_F-serratus_M_contig121.1650.1 ID=mRNA_F-serratus_M_contig121.1650.1|Name=mRNA_F-serratus_M_contig121.1650.1|organism=Fucus serratus male|type=CDS|length=2430bp|location=Sequence derived from alignment at F-serratus_M_contig121:590581..593737+ (Fucus serratus male)
ATGCCAAGCTCAGTGGCGTGCAAGCACATGCCTGTACCGAATACAGACGG
GGTTTGTAATTGCGACGGTGCTCCGGGACTCTACAAGCTTCAGCTACGGC
GTAAACTGCTACAACAACAGCTAAGTCTCGTCGATGGCAAGTACAAGCGC
GTTGCGAATGTCGTTGAGAAGAAACGCTTGGCGAAGCTTGCACAGCATAC
CAAAGAAGCCACGGTGATCCAAGAGGGTGAAAGCACAAAAACAGCTGAAA
AATGTACTGGTGGAGGGTCGAAGAATTTCACCAACCCACGTAGAAAGCCT
GAAATCGATTGTGCTGTCGGCATCCGCCGAGCGAATGCTATCGGCGTGAG
GGAGGGCTTATCGGGCCACCTTCCCCGTGATAAGGTACAGCGGCAACAAG
ATCTGCTGGCTCCGACACCCTTCAAAAAAGGCGGCCGCATTGACCATATC
AACAAAAAACACACATTACAGAACAAGCAACGGGAAATGGAGCGACATAA
AGCGTTGGAGCGACGACAGCGGTCGACTCATCTCCACCCAGTCGGTGCCC
GAAAGGAGGTGGCTATCGATCCACCGGTCTTCCCCGGTCGGTATCTACGA
GGAGAGGTGCCGTGTTCGAAGAATTGTTCAGCAGATGCCAAGCTCAGTGG
CGTGCAAGCACATGCCTGTACCGAATACAGACGGGGTTTGTAATTGCGAC
GGTGCTCCGGGACTCTACAAGCTTCAGCTACGGCGTAAACTGCTACAACA
ACAGCTAAGTCTCGTCGATGGCAAGTACAAGCGCGTTGCGAATGTCGTTG
AGAAGAAACGCTTGGCGAAGCTTGCACAGCATACCAAAGAAGCCACGGTG
ATCCAAGAGGGTGAAAGCACAAAAACAGCTGAAAAATGTACTGGTGGAGG
GTCGAAGAATTTCACCAACCCACGTAGAAAGCCTGAAATCGATTGTGCTG
TCGGCATCCGCCGAGCGAATGCTATCGGCGTGAGGGAGGGCTTATCGGGC
CACCTTCCCCGTGATAAGGTACAGCGGCAACAAGATCTGCTGGCTCCGAC
ACCCTTCAAAAAAGGCGGCCGCATTGACCATATCAACAAAAAACACACAT
TACAGAACAAGCAACGGGAAATGGAGCGACATAAAGCGTTGGAGCGACGA
CAGCGGTCGACTCATCTCCACCCAGTCGGTGCCCGAAAGGAGGTGGCTAT
CGATCCACCGGTCTTCCCCGGTCGGTATCTACGAGGAGAGGTGCCGTGTT
CGAAGAATTGTTCAGCAGTGAATGCGTTAATCTGGGTGTGTCCTCTAGAA
CAGCTGGACTACGATTACTACCTCCCAATGTTCTTCGATGGCATCCGCTG
CCTCGAAGAACCATGCAAGACGCTTGCAAGACAGGCAAGCCCTCGTCGTC
CCAGTGCAGACGAGAATCAGTGCGAATCTTCATGAATGCGTTAATCTGGG
TGTGTCCTCTAGAACAGCTGGACTACGATTACTACCTCCCAATGTTCTTC
GATGGCATCCGCTGCCTCGAAGAACCATGCAAGACGCTTGCAAGACAGGC
AAGCCCTCGTCGTCCCAGTGCAGACGAGAATCAGTGCGAATCTTCAGGGG
TGTACGATCTCTTGAGCGCAGTAAGAGGTTCCCCGGAGCGCATCTTGCCG
TCCCTTCCTGCCGTCGTGAAAGCGATCCGCTTGGCGATATTGTGCAATAA
TCCAGAGCTTCTCATCTTCACGTGTGGCGCCATTCAGGAGCTCGCCGGCG
GAAACGAGAAGGGGGTGTACGATCTCTTGAGCGCAGTAAGAGGTTCCCCG
GAGCGCATCTTGCCGTCCCTTCCTGCCGTCGTGAAAGCGATCCGCTTGGC
GATATTGTGCAATAATCCAGAGCTTCTCATCTTCACGTGTGGCGCCATTC
AGGAGCTCGCCGGCGGAAACGAGAAGGTAGGGGAGGCCCTCGTGAGGTAC
TACAAGTTGTTTCTGAAACTGCTCAACTCCTTCGTCAACACCACCAAGAG
CACCGGAGACAGGATTGACTATGGACAAAGGCAAGCGGTTAGAGCCGCAT
TTGTGTAGGGGAGGCCCTCGTGAGGTACTACAAGTTGTTTCTGAAACTGC
TCAACTCCTTCGTCAACACCACCAAGAGCACCGGAGACAGGATTGACTAT
GGACAAAGGCAAGCGGTTAGAGCCGCATTTGTGAACAACCACGACATCGG
CGAAGCGGTCACGACCGCCGTGGAGACGCTAGAACGCAACGGCGGCAAAA
CCGCCTTCGCCCAAATCAAGCACTGCATCCCAACGTGAACAACCACGACA
TCGGCGAAGCGGTCACGACCGCCGTGGAGACGCTAGAACGCAACGGCGGC
AAAACCGCCTTCGCCCAAATCAAGCACTGCATCCCAACGTATCAATCCTG
CATCAACTGAATCAATCCTGCATCAACTGA
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