mRNA_F-serratus_M_contig1206.1625.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: D8LEY4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEY4_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 6.030e-20 Identity = 53/90 (58.89%), Postives = 71/90 (78.89%), Query Frame = 1
Query: 226 MAQFLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARR-VVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSR 492
MAQFLI++++HF +E+ITKRLANSRAFQQFA+KTH VE+ ++ V + P EA KLMR GEK E S+A++FERFKAAL++EV++
Sbjct: 1 MAQFLIKIVNHFASEIITKRLANSRAFQQFAMKTHLKVEQTKKKVADNPGEAAKLMRGA---GEKVKAEVDSVASSFERFKAALKKEVAQ 87
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: A0A836CNG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.710e-10 Identity = 37/97 (38.14%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 226 MAQFLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRG------EKATEEAGSIAANFERFKAALQEEVSRDF 498
M ++I+HF +E+ITKRLA S+ FQ ALKTH++V+K R +N+P+ ++L +E K E +++A S RF+ AL EE+++D
Sbjct: 1 MNALFTKIINHFASEMITKRLAQSKTFQDMALKTHQHVQKGRGAINDPKLQQELYKEASKVASQVVSKEAVSQKASSFGQTLSRFRRALGEEINKDI 97
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: A0A024GVZ0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GVZ0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 5.250e-6 Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 235 FLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSRDF 498
FL R + +F+ +V K LAN+RAFQQFALKTH V + + +E AE L+ ET KR A + F +AL+EE++RD
Sbjct: 64 FLQRFVSYFINDVAVKALANNRAFQQFALKTHYRVNDVKNIASEG--AENLV-ETWKR----------TAPRVKEFTSALKEEIARDM 138
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: A0A5D6Y091_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y091_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.460e-5 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 235 FLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSRDF 498
F R++ + V +V K LAN+RAFQ+FALKTH VE A+ + NE + TL+R A + F +AL+EE++RD
Sbjct: 3 FFQRLVSYVVNDVAVKALANNRAFQRFALKTHYRVEDAKSIANEGASS---FLSTLERA----------APKVKEFSSALKEEIARDL 77
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: F0W759_9STRA (Uncharacterized protein AlNc14C28G2688 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W759_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.610e-5 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 235 FLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSRDF 498
FL R + HF+ +V K LAN+RAFQQFALKTH V + + +E A L+ ET KR A + F AL++E++RD
Sbjct: 20 FLQRFVAHFINDVAVKALANNRAFQQFALKTHYRVNDVKNIASEG--AGNLV-ETWKR----------TAPRVQEFTEALKQEIARDL 94
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: A0A7S2UX98_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX98_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.790e-5 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 235 FLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSRDFGGGK 510
F+ R+I + EV+ K LANS AFQ+FAL+ + VEKA+++ ++ + + + E EA AA RFK L EE+ +D G K
Sbjct: 30 FMARIIQYLANEVMVKHLANSPAFQRFALRIAQQVEKAKKLPDKSADIDII-------AENFQSEAKKAAAGLNRFKELLGEEIKKDLSGKK 114
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Match: A0A8K1C371_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C371_PYTOL) HSP 1 Score: 52.0 bits (123), Expect = 9.090e-5 Identity = 37/111 (33.33%), Postives = 53/111 (47.75%), Query Frame = 1
Query: 166 IGAFKKARARNVRSVIV*LTMAQFLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEAEKLMRETLKRGEKATEEAGSIAANFERFKAALQEEVSRDF 498
+G +R S+ L F R++ + V +V K LAN+RAFQ+FALKTH VE A+ + +E A + K K E F +A +EEV+RD
Sbjct: 3 VGRSSTTSSRRTFSIAALLASMSFFQRLVSYVVNDVAVKALANNRAFQRFALKTHYRVEDAKTIASEG--ATTIFSSLEKNAPKVKE-----------FASAFKEEVARDL 100 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1206.1625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1206.1625.1 >prot_F-serratus_M_contig1206.1625.1 ID=prot_F-serratus_M_contig1206.1625.1|Name=mRNA_F-serratus_M_contig1206.1625.1|organism=Fucus serratus male|type=polypeptide|length=116bp MAQFLIRMIDHFVTEVITKRLANSRAFQQFALKTHKNVEKARRVVNEPEEback to top mRNA from alignment at F-serratus_M_contig1206:46681..51478- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1206.1625.1 ID=mRNA_F-serratus_M_contig1206.1625.1|Name=mRNA_F-serratus_M_contig1206.1625.1|organism=Fucus serratus male|type=mRNA|length=4798bp|location=Sequence derived from alignment at F-serratus_M_contig1206:46681..51478- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1206:46681..51478- >mRNA_F-serratus_M_contig1206.1625.1 ID=mRNA_F-serratus_M_contig1206.1625.1|Name=mRNA_F-serratus_M_contig1206.1625.1|organism=Fucus serratus male|type=CDS|length=696bp|location=Sequence derived from alignment at F-serratus_M_contig1206:46681..51478- (Fucus serratus male)back to top |