mRNA_F-serratus_M_contig1201.1612.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 250 bits (638), Expect = 8.360e-75 Identity = 125/293 (42.66%), Postives = 172/293 (58.70%), Query Frame = 2
Query: 302 CWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYGMFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNR-------PGWLLLKRYLDGPNHPD--GRRVPDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRIV 1153
CWVF+HMNKSGG TV++++ P L E G+S L+D +W G + + +K +GGYTEG+R Y CKWFTVFRHPVSR++SAYFYC+ HD LC L + VDL TFA HW N+GLRQ ALA ++ + V + VS ++ R P W K YL P+ D G P++ + L A + + +YAA+GI+E+WDNS+ELFN L F+W +F+ G +N + K A E+K+F+ LD+LLY+HAL+VHR Q+ IV
Sbjct: 52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAET-FVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVS-EFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 241 bits (616), Expect = 4.750e-72 Identity = 126/300 (42.00%), Postives = 181/300 (60.33%), Query Frame = 2
Query: 320 MNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYG---MFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEAL--TSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSP-------FVSADYSYSNRPGWLLLKRYL----DGPNHPDGRRVPD---------ATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQY 1144
MNK+GG+TVK +L P ++ GLYDSPQW G DF Q D L + ++WG YTEG+RP+G + +CKWFT+FRHP+ RL+SAYFYCK D LC AL +D DL FA HW +FGLRQ ALA+V P+ ++++ + + + PGW LK YL D +G R D AT+ +LL+P +++ +YAA+G+LE W+ SL LFN AL P F+W F +G +N D H EA++ + TD ++++L LD+LLY++A++VH +Q+ +Y
Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQ-DFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNS-DGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKY 298
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 225 bits (573), Expect = 8.330e-64 Identity = 125/315 (39.68%), Postives = 174/315 (55.24%), Query Frame = 2
Query: 287 ADTGSCWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIW----GGYTEGIRPYGMFK--CKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMS---SPFVSA--DYSYSNRPGWLLLKRYLDGPN---------------HPDGRRVPDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRIV 1153
A CWVF H+ K GG+TVK +LR S G Y +YDS QWK+G D N +K W GGYTE +R C++FT+FRHP++R++SAYFYC++ DA C E + + VDL TFA+HW NF +RQ AL +V D V +P A D+ GW LK YL+ P D +A + LL+PA+ ++ Y A+GILE W+ +L LF+ ALE P W +F G Q +D + RLE++ K A TD+E+K+++RLD+LLYEHA+ V Q + Y ++
Sbjct: 151 ASPDQCWVFMHLQKCGGSTVKYMLRRSY---GSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQR-VDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.020e-58 Identity = 120/300 (40.00%), Postives = 174/300 (58.00%), Query Frame = 2
Query: 287 ADTGSCWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQN--DMLKRGHK--MIWGGYTEGIR---PYGMFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRP----GWLLLKRYLDGPNHPDGRRVPDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRIV 1153
A G CWVF H+ K GG+TVK LL D G + +YDS +WK G +F L G K ++ GGYTE +R P G C++FT+FRHP++R++SAYFYC++ D C E + + VDL TFA+HW NF LRQ AL +V D V Y RP G +L +R H D PDA + LL+PA+ ++ + Y A+GILE W+ +L LF+ L+ P NW +F G ++ +D +LE + + A TD+E+K+++RLD+LLYEHA+ V +Q + + ++
Sbjct: 172 ASPGQCWVFMHLQKCGGSTVKDLLE---DRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGA-GCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQLKM----YLERPQKEDGGVLGQREAMTA-HQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESG-KHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 207 bits (527), Expect = 8.400e-58 Identity = 117/303 (38.61%), Postives = 162/303 (53.47%), Query Frame = 2
Query: 302 CWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIW----GGYTEGIRPYGMFK-------CKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAV---MSSPFVSADYSYSNR-----PGWLLLKRYLDGPNHPDGRRVPDAT-MRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRI 1150
CW+F H+ K+GGTTVKRLL D G YDS QWK G + ++ W GGY E +R F+ C+WFTVFRHPVSRL+SAY+YC+ + D LC E ++S VDL TFARHW NF LRQ AL +V D V + SP + PGW +LK +L+ + P+ T + Y+ P + ++ + YA +GILEDW+ +L LF+ AL+ P W +F G N +D + D+ + A +D EI + L LD+ LY A+ + +Q Y I
Sbjct: 88 CWIFNHLQKAGGTTVKRLL---FDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLN-VDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 6.250e-55 Identity = 116/337 (34.42%), Postives = 173/337 (51.34%), Query Frame = 2
Query: 173 WVS-PVVFVLLLLLLESDRGGGRLYLDLEAPLTQHHHDNADTGSCWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYG-MFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRPGWLLLKRYLDGPNHPDGRRVPDAT-----------MRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQY 1144
WV P+ LL L ++ G L L P +CWV+T MNK+GGT+++R+++ + G + Q+ G +Q +L R +IWG YTEG+RPY + CKWFT+ RHP++RL+SA+ YC D LC + D+ FA HW N G+ Q ALA+ + ++ + S P W K Y +G P G+ A M +L+P +++ +YAA+GILE W+ S+ LF+ AL+ P FNWT+ +N D + + D+ + TD +KQ L LD+LLYEHA +VH+ QL +Y
Sbjct: 5 WVCWPLALGALLELAAANVGSDSPELSLSPP------------ACWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQ-ILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS--------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDS---KAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRY 317
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 186 bits (473), Expect = 7.740e-51 Identity = 110/303 (36.30%), Postives = 154/303 (50.83%), Query Frame = 2
Query: 293 TGSCWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYGMFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRPGWLLLKRYLDG--------------PNHPDGRRV--PDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGV---QNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQY 1144
T +CWVFTH NK+GGTTVK LR + + L S + G +Q D+L +I GGY EG+R CKWFT+ RHP++RLISA++YC D LC + D+ FA+HW N+ L Q AL V + + + P W K Y +G H + + V PD +L+P +++ YAA+GILE W S+ LF+ ALE P FNWT L QN I ++ L A A TD ++Q++ LD+LLYE+A ++H QL++Y
Sbjct: 34 TPTCWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQ-DLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEV--------DAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPD-----ILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAMLAA-----AMTDPVLRQYVWLDLLLYEYACSLHEEQLRRY 317
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 160 bits (404), Expect = 5.450e-42 Identity = 85/218 (38.99%), Postives = 124/218 (56.88%), Query Frame = 2
Query: 536 FRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRP----GWLLLKRYLDGPNHPDGRRV--------PDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDIDDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRIV 1153
++ P+ RL+SAYFYCK N D LC L + DL TFA+HW N+GLRQ +LA+V + V ++ + RP GW +K Y + + R D M YLL+P ++ Y+A+GILE W+ S+ LFN AL+ P+FNW T R LG +N +D +H EA + A D + + L LD+ LY+HA+AVH +Q++++ IV
Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAA---EQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKN-VDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.540e-41 Identity = 93/286 (32.52%), Postives = 152/286 (53.15%), Query Frame = 2
Query: 299 SCWVFTHMNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYGMFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRPGWLLLKRYLDGPNHPDGRRVPDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDI--DDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRI 1150
SCW+F HM+KSG + +R+ ++ + ++D+ QW+ G D D++ K++ GG E +R + CKW T+FRHP++RL+SAY +C D +C +++ L FA W NF +RQ AL V P AV + + + + W L+K YL G D + +LEP ++ QYAA+GI ++ + ++ LF+ AL +W++ + LG+ ++ D E E++ + A + I LRLDM LYEHA+ V + Q+ Q+ I
Sbjct: 272 SCWIFMHMDKSGASGARRVATERWRKDEL---VFDTVQWRRG-DGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCP----PTESTGLVVFAELWGNFAMRQFALESVSPSAVKE--WAAQRQARTGTSMWYLVKEYL-----ARGGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.360e-36 Identity = 90/279 (32.26%), Postives = 144/279 (51.61%), Query Frame = 2
Query: 320 MNKSGGTTVKRLLRPSLDENGISYGLYDSPQWKMGLDFLQNDMLKRGHKMIWGGYTEGIRPYGMFKCKWFTVFRHPVSRLISAYFYCKTNEHDALCGIEALTSDTVDLRTFARHWSNFGLRQLALAYVQPDAVMSSPFVSADYSYSNRPGWLLLKRYLDGPNHPDGRRVPDATMRYLLEPALKMMGEQYAAIGILEDWDNSLELFNVALEFPNFNWTTKFRVLGVQNDI--DDEMHRLEADITKLAHTDAEIKQFLRLDMLLYEHALAVHRRQLKQYRI 1150
M+KSG + +R+ ++ + ++D+ QW+ G F + M R K++ GG E +R + CKW T+FRHP++RL+SAY +C D +C +++ L FA W NF +RQ ALA V P AV + + + + W L+K YL G D + LEP ++ QYAA+GI ++ ++ LF+ AL +W++ + LG+ + D E E++ + A + I LRLDM LYEHA+ V + Q+ Q+ I
Sbjct: 1 MDKSGASGARRVATEQWRKDEL---VFDTVQWRRGDGFAADVMASRW-KLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCP----PTESTGLAAFAELWGNFAMRQFALAAVSPSAVKE--WAAQRQARTGTSMWYLVKEYL-----ARGGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1201.1612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1201.1612.1 >prot_F-serratus_M_contig1201.1612.1 ID=prot_F-serratus_M_contig1201.1612.1|Name=mRNA_F-serratus_M_contig1201.1612.1|organism=Fucus serratus male|type=polypeptide|length=337bp MRTAERPSWVSPVVFVLLLLLLESDRGGGRLYLDLEAPLTQHHHDNADTGback to top mRNA from alignment at F-serratus_M_contig1201:81117..88609+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1201.1612.1 ID=mRNA_F-serratus_M_contig1201.1612.1|Name=mRNA_F-serratus_M_contig1201.1612.1|organism=Fucus serratus male|type=mRNA|length=7493bp|location=Sequence derived from alignment at F-serratus_M_contig1201:81117..88609+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1201:81117..88609+ >mRNA_F-serratus_M_contig1201.1612.1 ID=mRNA_F-serratus_M_contig1201.1612.1|Name=mRNA_F-serratus_M_contig1201.1612.1|organism=Fucus serratus male|type=CDS|length=2022bp|location=Sequence derived from alignment at F-serratus_M_contig1201:81117..88609+ (Fucus serratus male)back to top |