mRNA_F-serratus_M_contig120.1582.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: D7G5S7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S7_ECTSI) HSP 1 Score: 321 bits (822), Expect = 4.880e-93 Identity = 270/634 (42.59%), Postives = 347/634 (54.73%), Query Frame = 1
Query: 88 MGCYSSKVAQQPL------EANKRPSRKDHDSKGTKLEADAEESRAALPV---------ANPKGCFEAVCMRKAD---AGACRAAEKIE-EVEGETIKDESGLVMRTPRRSNERDLFFAARTGDLQLVYYLLGISCDDAATVVNA--DSPSIHDTLHSYKTGSTALLVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVNRRVPAEMPCKKNARVCICAADE-GMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVA-----TAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATALLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVMTARTRQRHDHADGGVILELLVTPVTALE-RSAPGPCAGPK--LPAETNRADWGEGNNTNIASNKNPDEGEN-----EDVILVSDWNNDQELDSSDIWDGNKDSIAPNAASNCDALANKFRSSEDIGS----ADITTMEAGGEQDVLLCEDFESEAVENGSPHYLPTNGEAEEGT 1872
MGC SSKV Q+P EANK S G + EA EESR ALPV A K KA+ +G A+ E E EGETI D SGL MRTPR + L+ AA+ GDL LV +L + A V+A D D ++ + D++ERGMWGNTPL+VATQY H ++AL L+ GA+ ENERQATALH+SCA+G + V AL +N A+ DP A VHHP V+GG+T+ LTPLSAAA GGY E+VRLL+QHG ++NRRV K R D G L AA++G T+TC LL+D+GA L+ +D + RT +HAILGGHE+TA ALL A ++L G C PE G +S G L ACD+GL V +L++AGA ++ +D +GA+ALLHXXXXXXXXXXXXXXXXXX PV AR+R+ D G IL LL V E R G + L A+ N + GE ++ ++ + E E+ EDV LVSDW+ D E DI+D N N A C + R SE++ + A + E E DVLL D++S+ E P E E+ T
Sbjct: 1 MGCVSSKVGQRPPDQVAGHEANK--------SAGGQEEA-REESRPALPVVGQIQPARPAQSKNTENRNVQGKAEHHRSGENPRAKGGEWEEEGETITDVSGLQMRTPRTCADPGLYAAAKNGDLPLVQMILSSNTGRGAAAVDAGDDGTMYQDRPEPDGAVPSSKVADLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVVSALLNNGANVDPSVATVHHPGVNGGQTIPLTPLSAAATGGYTELVRLLVQHGVDINRRVAPVGSDGKERRSSFLGTDGIGGSALTAAARYGHTETCFLLVDSGANLLLEDWNSRTPLLHAILGGHEQTAMALLDGARSVGCVSQLVGA--CSPETGGATSS-GLAPLHAACDKGLQDVVRALVAAGAKVEEKDVAGASALLHXXXXXXXXXXXXXXXXXXDPMAADSEGDTPVSVARSRR--DQPGGEEILSLLEAAVADDEHRDGRLGSDGSRRALGAKINDVNNGEDEGCDVLTDGSQREKEDGNEDEEDVFLVSDWDPDGE----DIFDDNC-----NVAERC----GQSRQSENVENLPEPAAVNADENDDEDDVLLVGDYDSQLEEEEFLDVCPAADEREDAT 607
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: A0A6H5JYM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM2_9PHAE) HSP 1 Score: 293 bits (751), Expect = 5.720e-83 Identity = 189/419 (45.11%), Postives = 246/419 (58.71%), Query Frame = 1
Query: 88 MGCYSSKVAQQPLEANKRPSRKDHDSKGTKLEADAEESRAALPV---------ANPKGCFEAVCMRKAD----AGACRAAEKIEEVEGETIKDESGLVMRTPRRSNERDLFFAARTGDLQLVYYLLGISCDDAATVVNA--DSPSIHDTLHSYKTGSTALLVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVNRRVPAEMPCKKNARVCICAADE-GMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVA-----TAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATA 1281
MGC SSKV Q P + K+ S G + EA EESR ALPV A K + KA+ G RA E EGETI D SGL MRTPR + L+ AA+ GDL LV +L + A V+A D D + + D++ERGMWGNTPL+VATQY H ++AL L+ GA+ ENERQATALH+SCA+G + V AL ++ A+ DP A VHHP V+GG+T+ LTPLSAAA GGY E+VRLL+QHG ++NRRV K R D G L AA++G T+TC+LL+D+GA L+ +D + RT +HAILGGHE+TA ALL A ++L G C PE G +S G L+ ACD+GL V +L++AGA ++ +D +GA+A
Sbjct: 1 MGCVSSKVGQTPPDQVAGHEAKE--SAGGQGEA-REESRPALPVGGHIQPARPAQSKNAEKRNVQGKAEHHRSGGNPRAKGGEWEEEGETITDLSGLQMRTPRTCADPGLYAAAKNGDLPLVQMILSSNTGRGAAAVDAGDDGTMYQDRPEPDGPAPGSKVADLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVASALLNSGANVDPSVATVHHPGVNGGQTIPLTPLSAAATGGYTELVRLLVQHGVDINRRVAPVGGDGKERRSSFLGTDGIGGSALTAAARYGHTETCLLLVDSGANLLLEDWNSRTPLLHAILGGHEQTAMALLDRARSVGCVSQLVGA--CSPETGGATSS-GLAPLRAACDKGLQDLVRALVAAGAKVEEKDVTGASA 413
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: A0A836CL65_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL65_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.720e-18 Identity = 99/317 (31.23%), Postives = 134/317 (42.27%), Query Frame = 1
Query: 526 VDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRA--LFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVNRRV---PAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHE--RTAHA-------LLMVATAKLT---------------------------GR-----------------------ARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATAL 1284
V++N R GNTPL++A Q H VA VL +GAD N A AL ++C G A + A ADPPAA V P + G LTPL AA + G ++L+++GA ++R PAE CKK G+ LM A G + L+ A ++ +D DGR+A +HA + HE RTA A +L V K T GR +R P V ++ G L +AC + VE+LL+AGA A DS+GAT L
Sbjct: 45 VNLNIRDAHGNTPLMLALQQEHIEVAFVLAHAGADLTLVNSDGAGALLWACLVGASAPVLAGMMLRKGAPADPPAAEVEVPSL--GIRQRLTPLLAATICGCKVTCQVLVKYGANIDRATFVQPAEQ-CKKGEPAPPLYERGGITSLMMACLMGHGELAAALVAMDASVLVEDADGRSALMHACINRHEDVRTALANCNIQYPMLTVVRNKKTKQRSSPWVRQCSSKMLMAVLVEEHHADGRRASMHACINCHEETALDLLAACHSRQRPALVAMADFKGDAPLHVACALRMERLVEALLAAGARPRAADSTGATPL 358
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI00201EC82C (uncharacterized protein LOC124152553 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EC82C) HSP 1 Score: 92.0 bits (227), Expect = 4.760e-15 Identity = 81/281 (28.83%), Postives = 120/281 (42.70%), Query Frame = 1
Query: 523 LVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFD-NDADADPP----------AAVVHH--------------PCVDGGRTLLLTPLSAAAVGGYVEIVRLLL-QHGAEVNRRVPAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIH-AILGGHERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATAL 1284
+ D+N RG +G TPL+VA + GH V +L++ G D E++ LH +C G +D+ + + AD + AAV H VD GR +L A +GG+V++V+ +L Q ++N R P G PLM AA +G LL+ GA++ +D DGR +H A LGGH +L TA + R + +G+ LL LA G + L+ GAD+ D G L
Sbjct: 121 VADINSRGKYGRTPLMVAAENGHRQVFDLLVREGDDVSLEDDDGDNILHVACLGGHVDMVKYVLSLKVADINSRGHYGMTPLMVAAVNGHRQVFDLLVTRGAGVSLVDDGRNNIL---HVACLGGHVDMVKYVLSQKVTDINSRGPY-----------------GRTPLMVAAVNGHRQVFDLLVTQGADVSLED-DGRNNILHVACLGGHVDMVKYVLSQKTADINSRGQ-----------YGRTLLMLAVSAGHRQVFDLLVREGADVSLEDDDGDNIL 369
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI00201EFF7B (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EFF7B) HSP 1 Score: 86.3 bits (212), Expect = 3.660e-14 Identity = 70/271 (25.83%), Postives = 115/271 (42.44%), Query Frame = 1
Query: 523 LVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVN-----RRVPAEMPC------------KKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATAL 1284
+ D+N RG +G TPL+VA + GH V +L++ GAD + LH +C G +D+ + + + DAD ++G TP+ AAV G+ ++ LL+ GA+V+ R M C + G P+M+AA+ G +L+ GA++ D +G A LGGH +L A + R + +G+ L +A ++G + L+ GAD+ D +G L
Sbjct: 120 VADINGRGQYGRTPLMVAPEKGHRQVFDLLVREGADVLLVGVDRNNILHMACLGGHVDIVKYVL-SQKDAD----------MNGRVQYGWTPVMVAAVKGHRQVFDLLVTQGADVSLVGVDRNNILHMACHGGHVGMLKHVLSQKVADINSRGKYGWTPVMKAARKGHRQVFDILVGGGADVSLVDDNGSNILHVACLGGHIDMVKYVLSQKVAVVNRRRQ-----------YGRTPLMMAAEKGHRQVFDLLVREGADVSLVDDNGNNIL 368
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI00201F6EA8 (ankyrin repeat domain-containing protein 50-like isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F6EA8) HSP 1 Score: 82.8 bits (203), Expect = 1.320e-12 Identity = 73/275 (26.55%), Postives = 112/275 (40.73%), Query Frame = 1
Query: 529 DVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCR-ALFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVN----------------------RRVPAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATAL 1284
D+N RG +G TPL+VA + GH V +L++ GAD ++ LH +C G +D+ + L AD + GRT PL AA G+ ++ LL++ GA+V+ + V ++ N R G P+M AA+ G C LL+ GA++ D A LGGH +L A + GR + +G+ L +A +G + L+ GAD+ D G L
Sbjct: 55 DMNGRGQYGRTPLMVAAEKGHRQVFDLLVREGADVSLVDDDGNNILHMACIGGHVDMVKYVLSQRVADINSRGQY--------GRT----PLMVAAEKGHRQVFDLLVRGGADVSLVGVDRKNILHVACLGGHVDMVKYVLSQKVADMNGR-----GTYGRTPVMMAAEKGHRQVCDLLVREGADVSLVGVDRNNILHMACLGGHVDIVKYVLSQQDADMNGRGQ-----------YGRTPLMMAAVKGHRQVFDLLVRKGADVSLVDDDGNNIL 301
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI001EE5C039 (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5C039) HSP 1 Score: 80.9 bits (198), Expect = 5.250e-12 Identity = 74/278 (26.62%), Postives = 115/278 (41.37%), Query Frame = 1
Query: 523 LVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDN--------DADADPP---AAVVHHPCV------DGGRTLLLTP-----LSAAAVGGYVEIVRLLL-QHGAEVNRRVPAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGH-ERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSGATAL 1284
+VD+N RG +G+TPL++A++ GH + +++K G + R ++ LH +C G + + R L D P AA H V GG LL L AA +GG VE+VR +L ++ VNRR G P+M A + G D L+ G ++ D +G A +GGH + H L + + R + AV +++H G K + + L+ GAD+ D G L
Sbjct: 219 IVDINSRGQYGSTPLMLASEKGHKGIFDLIVKRGGNVRTLDDLGNNILHIACCGGHVRMVRYLISKRFVDINSRGQDGGTPIMCAAEKGHRLVFDLLVRRGGNVSLLDDKGDDILHAACLGGNVEMVRYILSKYRIPVNRR-----------------GQFGRNPVMAATQQGSKDLFDYLVRKGGNVIHIDYEGNNILHVACIGGHVQMVEHVLSLGFGIDINSRGQKGRTAVWVAAHMGPKDV-----------FDFLVREGADVSQADDDGNNIL 468
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI001EE61C32 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE61C32) HSP 1 Score: 81.3 bits (199), Expect = 5.610e-12 Identity = 60/253 (23.72%), Postives = 105/253 (41.50%), Query Frame = 1
Query: 523 LVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDNDADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVN-----------------RRVPAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESL 1230
+VD+N RG +G TP+++A ++GH V +L+ +G D ++ LH +C G +D+ + + +H +D T + AA GYV +V LL++ GA+V+ E ++ C GM PLM AAKHG LL+ ++ +G A GG+ER + ++ + + R +H+G +A ++G +S+
Sbjct: 453 VVDINSRGEYGRTPVMIAARWGHKGVFDLLVSTGGDVALVSDHGDNILHVACYGGHVDIVKLIL-----------YKYHVNLDTRNQYGRTAVMVAARMGYVSVVDLLIRRGADVSVVNDEGDNLLHVACSGGHLEMVEYVVLRDLVDINCTELLGMTPLMLAAKHGHIKVFDLLVSEECDVSVLTVNGDNVLHVACSGGNERMVNHIIQMDMVDVAAR-----------NHFGSTAAMVAREQGFQSLSDSM 683
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: UPI001EAFA47D (ankyrin repeat domain-containing protein 17-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFA47D) HSP 1 Score: 80.9 bits (198), Expect = 8.530e-12 Identity = 74/273 (27.11%), Postives = 117/273 (42.86%), Query Frame = 1
Query: 523 LVDVNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCR-ALFDNDADADP-----------PAAVVHHPCVD-----GGRTLLLTP-----LSAAAVGGYVEIVRLLL-QHGAEVNRRVPAEMPCKKNARVCICAADEGMPPLMEAAKHGRTDTCILLIDNGAELVAKDCDGRTAFIHAILGGHERTAHALLMVATAKLTGRARCLPEAVGLSSHWGQKLLQLACDRGLHFAVESLLSAGADIDARDSSG 1272
+ D+N RG +G TPL+VA + GH V +L+ GA ++ + LH +C G +D+ + L AD + A H D GG L+ L A +GG+V++V+ +L Q AE+N R G PLM AA++G LL+ GA++ + DG F A LGGH + V + K+ G + H G+ L +A ++G + L++ G D+ D++G
Sbjct: 255 VADINSRGQYGWTPLMVAAEKGHRQVFDLLVTRGAGVSLVDDNRNNILHVACHGGHVDMVKYVLSQKVADMNGRGHNGRTPLMMAAEKGHRQVFDLLVTKGGDVSLVDNNGNNFLHVACLGGHVDMVKYVLSQKVAEINSR-----------------GKYGRTPLMVAAENGHRQVFDLLVREGADVSLVEDDGDNIFHVACLGGH---VDMVKYVLSQKVAG--------INSWGHNGRTPLMMAAEKGHRQVFDLLVTQGGDVSLVDNNG 499
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Match: A0A0P1B766_PLAHL (Ankyrin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B766_PLAHL) HSP 1 Score: 79.3 bits (194), Expect = 1.280e-11 Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 1
Query: 532 VNERGMWGNTPLLVATQYGHANVALVLLKSGADARAENERQATALHYSCADGRIDVCRALFDN------DADADPPAAVVHHPCVDGGRTLLLTPLSAAAVGGYVEIVRLLLQHGAEVNRRV 879
VN RGMW +TPL+ A QY H AL LL GA+ + NE+ TAL + +G + L +N D V++ D L L+PL AA++ G+ +IVRLLL +GA+VN++V
Sbjct: 110 VNIRGMWESTPLISAAQYAHCEAALWLLNHGANPHSSNEKNVTALLLASLEGLTPLVVKLVENIDSKSSTQSIDQQIGAVYNAVFD--VNLRLSPLLAASMNGHEDIVRLLLDNGADVNQQV 229 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig120.1582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig120.1582.1 >prot_F-serratus_M_contig120.1582.1 ID=prot_F-serratus_M_contig120.1582.1|Name=mRNA_F-serratus_M_contig120.1582.1|organism=Fucus serratus male|type=polypeptide|length=780bp MAKIVKAFSRCGPLMGCYSSKVAQQPLEANKRPSRKDHDSKGTKLEADAEback to top mRNA from alignment at F-serratus_M_contig120:114583..121178- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig120.1582.1 ID=mRNA_F-serratus_M_contig120.1582.1|Name=mRNA_F-serratus_M_contig120.1582.1|organism=Fucus serratus male|type=mRNA|length=6596bp|location=Sequence derived from alignment at F-serratus_M_contig120:114583..121178- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig120:114583..121178- >mRNA_F-serratus_M_contig120.1582.1 ID=mRNA_F-serratus_M_contig120.1582.1|Name=mRNA_F-serratus_M_contig120.1582.1|organism=Fucus serratus male|type=CDS|length=4680bp|location=Sequence derived from alignment at F-serratus_M_contig120:114583..121178- (Fucus serratus male)back to top |