mRNA_F-serratus_M_contig12.1558.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: D8LFF1_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFF1_ECTSI) HSP 1 Score: 265 bits (678), Expect = 3.240e-85 Identity = 127/164 (77.44%), Postives = 143/164 (87.20%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 527
MN QMN+TFRGAAAQ+ISKQHP+TH+Q VCRLYR +LKLLDSWAIDRT+F EAT +R F+EGS C P ARA AL+R A K ++ +VHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPD VL EFK +P EVEVDMS+PE+GRMS+AGQVLVDLATKRVY
Sbjct: 1 MNAQMNSTFRGAAAQFISKQHPITHKQEVCRLYRASLKLLDSWAIDRTIFLEEATKVRASFDEGSKCGPDSARAKALMRGAYKMIDEHVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDEVLAEFKGVPMEVEVDMSRPEEGRMSKAGQVLVDLATKRVY 164
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A835YJC3_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC3_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.560e-42 Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 3
Query: 48 MNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 527
MNA+FR A ++ +TH+Q VCRLYR +L+LLDSWA+DRTVF EA IR F+ + + RA L+ +A+ + YVH DRYI YMP GS FMRNP PLE CYP GIP+ V +E I E+ +DM+ + G ++AG + VDLATK++Y
Sbjct: 1 MNASFRAVAERFRMAPESLTHKQEVCRLYRASLRLLDSWAVDRTVFLDEAEKIRDQFDANAALDARSGRARYLIANARASLRTYVHPDRYIPAYMPGGSLFMRNPALPLEVCYPNGIPEDVAKEMGGI--ELNIDMTYAKPGVKAKAGTLYVDLATKQMY 158
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A3F2RHY1_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RHY1_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.010e-33 Identity = 64/126 (50.79%), Postives = 84/126 (66.67%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV 410
+NP MN TFR +++ K +TH+Q V RLY+ +LK LDSW IDR ++N EAT IR FN S +P A LVR+AQ+K+++Y H DRYI YMP G+ +MRN P PL+ C+P G IPD V
Sbjct: 6 VNPNMNKTFREVVGRFVGKPQQLTHKQTVQRLYKKSLKTLDSWIIDRRLWNEEATKIRAEFNTNSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGTLYMRNAPIPLDVCFPDGVIPDDV 131
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A8K1CT02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT02_PYTOL) HSP 1 Score: 128 bits (322), Expect = 3.670e-32 Identity = 63/141 (44.68%), Postives = 89/141 (63.12%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEVDMS 458
+N MN TFR A++ + ++H+Q V RLY+ +LK LDSW IDR ++N EAT IR F + EP A LVR+A++K+E Y H DRY+ YMP G+ FMRN P PL+ C+P GIP+ EE + + + +DM+
Sbjct: 3 VNANMNQTFREVVARFANPTEKLSHKQTVTRLYKQSLKTLDSWIIDRRLWNEEATKIRAEFEQNKHLEPNSGLAKRLVREAEEKLEKYTHPDRYVYNYMPGGTRFMRNAPIPLDVCFPDGIPEG--EEVSPL-EAINIDMT 140
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: K3WSQ1_GLOUD (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSQ1_GLOUD) HSP 1 Score: 127 bits (320), Expect = 7.390e-32 Identity = 61/126 (48.41%), Postives = 84/126 (66.67%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV 410
+NP MN TFR A++ + ++H+Q V RLY+ +LK LDSW IDR ++N EAT IR F++ +P A LVR+AQ+K+E+Y H D+Y+ YMP G+ FMRN P PL+ C+P G IPD V
Sbjct: 3 VNPNMNKTFREVVARFGAPAEELSHKQAVQRLYKQSLKTLDSWIIDRRLWNEEATKIRAQFDQNRNLDPSSGLAKRLVREAQEKVEHYTHPDKYVFNYMPGGTRFMRNAPIPLDVCFPDGVIPDDV 128
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A662X962_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X962_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.130e-31 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLG-IPDSV 410
+N MN TFR ++Y+ +THQQ V RLY+ +LK LD W IDR ++N EAT IR F+ S +P + LVR+AQ+K+++Y H DRY+ YMP GS FMRN P PL+ C+P G IPD V
Sbjct: 6 VNANMNKTFREVVSRYVGAPQQLTHQQTVQRLYKQSLKTLDCWIIDRRLWNEEATKIRAEFDANSKLDPESGLSKRLVREAQEKLDHYTHPDRYVFNYMPGGSLFMRNAPIPLDVCFPDGVIPDDV 131
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: D0NC32_PHYIT (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=20 Tax=Peronosporaceae TaxID=4777 RepID=D0NC32_PHYIT) HSP 1 Score: 123 bits (308), Expect = 4.460e-30 Identity = 62/138 (44.93%), Postives = 86/138 (62.32%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEV 449
+N MN TFR +++ ++H+Q V R+Y+ +LK LDSW IDR ++N EAT IR F+ S +P A LVR+AQ+K+++Y H DRYI YMP GS FMRN P PL+ C+P G NIP++VE+
Sbjct: 6 VNANMNKTFREVVGRFVGAPPQLSHKQKVQRVYKKSLKTLDSWVIDRRLWNEEATKIRAEFDANSKLDPESGLAKRLVREAQEKVDHYTHPDRYIFNYMPGGSLFMRNAPIPLDVCFPDG----------NIPEDVEL 133
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A8J2WDU4_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WDU4_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.780e-30 Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = 3
Query: 48 MNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 527
M+A+FR AAAQY +TH Q VCRLYRNALK +SWA+DR VF EA +R F++ + A L+ ++K+ H DRYI Y+P GS +MRN P PL C +P+ E F+N D+++ DG S GQVLVD +K++Y
Sbjct: 12 MDASFRAAAAQYRQAAPKLTHAQRVCRLYRNALKTQNSWAVDRQVFIAEADKMRAEFDKHAQLAATSVEARNLLERGEEKLFQESHPDRYIVAYLPGGSLYMRNAPLPLHVCRDGHVPEGESETFRNP------DLTRVVDGEKSAGGQVLVDQHSKQMY 165
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A2D4C2N7_PYTIN (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2N7_PYTIN) HSP 1 Score: 122 bits (305), Expect = 1.110e-29 Identity = 60/138 (43.48%), Postives = 83/138 (60.14%), Query Frame = 3
Query: 36 MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEV 449
+N M T+R A+ + ++H+Q V RLY+ +LK LDSW IDR ++N EAT IR F+ +P LVR+A++K+E Y H DRY+ YMP G+ FMRNPP PL+ C+P G NIP++VEV
Sbjct: 3 VNMNMAQTYREVVARVANPVEKLSHKQTVTRLYKQSLKTLDSWVIDRRLWNEEATKIRAQFDSHKALDPNSGLVKRLVREAEEKLEKYTHPDRYVFNYMPGGTRFMRNPPIPLDVCFPDG----------NIPEDVEV 130
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Match: A0A4D9CY03_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY03_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.880e-29 Identity = 68/159 (42.77%), Postives = 94/159 (59.12%), Query Frame = 3
Query: 51 NATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFNTEATAIRKMFNEGSTCEPGGARATALVRDAQKKMENYVHVDRYIRPYMPSGSSFMRNPPPPLEACYPLGIPDSVLEEFKNIPKEVEVDMSKPEDGRMSRAGQVLVDLATKRVY 527
NA+ R AAAQYI+ ++H+ +V RLYR +LK L+SWAIDR VF +EA +R F+ + P + ALVR A +++ Y H D+YI P+MP G+ FMRNPP P + + +P+ V EE NI DM+ G G+VLVD A K +
Sbjct: 3 NASMRAAAAQYINPAPQLSHKTIVVRLYRKSLKTLNSWAIDREVFLSEAGKLRASFSANAHLAPESGKVKALVRKAHEELLRYSHPDKYILPWMPGGTLFMRNPPLPFDVVFAGHVPEDVKEEPLNI------DMTPVVKGEKGD-GRVLVDSANKAYF 154 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig12.1558.1 >prot_F-serratus_M_contig12.1558.1 ID=prot_F-serratus_M_contig12.1558.1|Name=mRNA_F-serratus_M_contig12.1558.1|organism=Fucus serratus male|type=polypeptide|length=165bp MNPQMNATFRGAAAQYISKQHPVTHQQVVCRLYRNALKLLDSWAIDRTVFback to top mRNA from alignment at F-serratus_M_contig12:943743..947475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig12.1558.1 ID=mRNA_F-serratus_M_contig12.1558.1|Name=mRNA_F-serratus_M_contig12.1558.1|organism=Fucus serratus male|type=mRNA|length=3733bp|location=Sequence derived from alignment at F-serratus_M_contig12:943743..947475- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig12:943743..947475- >mRNA_F-serratus_M_contig12.1558.1 ID=mRNA_F-serratus_M_contig12.1558.1|Name=mRNA_F-serratus_M_contig12.1558.1|organism=Fucus serratus male|type=CDS|length=990bp|location=Sequence derived from alignment at F-serratus_M_contig12:943743..947475- (Fucus serratus male)back to top |