mRNA_F-serratus_M_contig12.1551.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: D8LFE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE4_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.430e-53 Identity = 136/178 (76.40%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGGCVVS 978
MPTDTELHKAAHNGDLGKVKQL+E+GEI VN PGA +RRALHRAAGGNHVEIM YL++KGAPV+Q DK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GR VV++LMEKATA G LE++CN +D GKTPF++A G+ K CSLLKELGDPNA+S C +S
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACEGGRVDVVRSLMEKATALGVLEEMCNKQDAGGKTPFDMAAAGQHKATCSLLKELGDPNAQSAACTIS 178
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A836CN67_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN67_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.020e-32 Identity = 120/178 (67.42%), Postives = 131/178 (73.60%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGGCVVS 978
MPTDTELHKAAHNGDL K K+L+E G EVN PGA DRRALHRAAGGNHV ++ YLL K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATA L+ LCN KD K F++A EGK + VC LLKE+GDPNA+S CV+S
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELIEGGGAEVNEPGASDRRALHRAAGGNHVAVIEYLLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAASLDALCNEKDSNAKGAFDLAAEGKHQAVCKLLKEMGDPNAQSAACVIS 178
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A6H5JSR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR0_9PHAE) HSP 1 Score: 123 bits (309), Expect = 5.610e-30 Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADK 648
MPTDTELHKAAHNGDLGKVKQL+E+GEI VN PGA +RRALHRAAGGNHVEIM YL++KGAPV+Q DK
Sbjct: 1 MPTDTELHKAAHNGDLGKVKQLVEDGEIAVNEPGAAERRALHRAAGGNHVEIMNYLMEKGAPVDQTDK 68
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A836CGQ7_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ7_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.690e-26 Identity = 113/178 (63.48%), Postives = 122/178 (68.54%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGGCVVS 978
MPTDTELHKAAHNGDL K K+L E G ++VN PGA DRRALHRAAGGNH ++ YLL KGAP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ATA LE +CN KD K LLKE+GDPNA+S C +S
Sbjct: 1 MPTDTELHKAAHNGDLAKCKELTEAGGVDVNEPGAADRRALHRAAGGNHTGVIEYLLSKGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAATLEAMCNEKDSNEKXXXXXXXXXXXXXXXXLLKEMGDPNAQSAACTIS 178
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A7S4S639_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S639_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.020e-20 Identity = 111/179 (62.01%), Postives = 124/179 (69.27%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGG-CVVS 978
MP DT LHKA+HNGD +V L+E GEI+VN PGA +RR LHRAAGGNHV+I YLL GA V+ AD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KLE +D GKT IA EGK K + LKE GDP+A S C++S
Sbjct: 1 MPFDTALHKASHNGDFKQVTALIEAGEIDVNTPGASERRPLHRAAGGNHVKICEYLLSNGAGVDLADRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GNKKLELFRAQRD-DGKTALNIAKEGKNKGIIKALKEAGDPSATSSAICIIS 177
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: D7FGW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW9_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.350e-19 Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADK 648
MP DTELHK+AH GD+ V+QL+E GE+ VN GAQDR ALHRAAG NHV I+ YLL GAPVN AD+
Sbjct: 1 MPLDTELHKSAHKGDIQSVRQLVETGEVNVNQKGAQDRTALHRAAGANHVGIIIYLLQAGAPVNTADR 68
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A7S2CQ70_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQ70_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.470e-17 Identity = 92/183 (50.27%), Postives = 109/183 (59.56%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGE-----IEVNAPGAQDRRALHRAAGGNHVEIMTYLLD-KGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGGCVV 975
MP DT LHKA H+GD+ ++K++ EE + I+VNA GAQDRR LHRAAGGNH + + +L+D K A V+Q DK XXXXXXXXXXXXXXXXXXXX XXXXXXXXX KL LC KD K P ++A GK K V + LK GDP A S CV+
Sbjct: 1 MPVDTPLHKACHSGDINEIKKVFEEHDPDEDPIDVNAAGAQDRRPLHRAAGGNHKDAVAFLIDEKQATVDQVDKPGXXXXXXXXXXXXXXXXXXXXDRGADITAATASGMXXXXXXXXXXXXXXXXXXXXXXXX--KLA-LCAAKDSNDKVPCDLAVAGKHKAVVTALKGAGDPVAASSACVI 180
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A067BKJ0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BKJ0_SAPPC) HSP 1 Score: 89.4 bits (220), Expect = 5.020e-17 Identity = 102/177 (57.63%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLLDKGAPVNQADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTTVVKTLMEKATATGKLEDLCNTKDVAGKTPFEIATEGKQKDVCSLLKELGDPNAKSGGCVV 975
MP+DT LHKAAHNGD G V Q+LE+ +++VN PGA DRRALHRAAGGNH E+ T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + KD GK F++A GK VC +KELGDP A+S C +
Sbjct: 1 MPSDTPLHKAAHNGDKGAVLQILEDPDMDVNVPGAADRRALHRAAGGNHAELCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSA-------LKDKDGKMAFDLAMAGKHSAVCKAMKELGDPAAQSSSCAI 170
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: A0A024G566_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G566_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.730e-16 Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMTYLL 615
MP+DT LHKAAHNGD G Q+LEE + VNAPGA DRRALHRAAGGNH E+ T LL
Sbjct: 1 MPSDTPLHKAAHNGDKGACLQILEENLVNVNAPGAGDRRALHRAAGGNHAEVCTLLL 57
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Match: H3H3F1_PHYRM (Uncharacterized protein n=24 Tax=Oomycota TaxID=4762 RepID=H3H3F1_PHYRM) HSP 1 Score: 85.9 bits (211), Expect = 8.070e-16 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 1
Query: 445 MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVEIMT 606
MP+DT LHKAAHNGD G Q+LEE ++VNAPGA DRRALHRAAGGNH E+ T
Sbjct: 1 MPSDTPLHKAAHNGDKGACLQILEEKSVDVNAPGAGDRRALHRAAGGNHAELCT 54 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig12.1551.1 >prot_F-serratus_M_contig12.1551.1 ID=prot_F-serratus_M_contig12.1551.1|Name=mRNA_F-serratus_M_contig12.1551.1|organism=Fucus serratus male|type=polypeptide|length=179bp MPTDTELHKAAHNGDLGKVKQLLEEGEIEVNAPGAQDRRALHRAAGGNHVback to top mRNA from alignment at F-serratus_M_contig12:865372..869818- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig12.1551.1 ID=mRNA_F-serratus_M_contig12.1551.1|Name=mRNA_F-serratus_M_contig12.1551.1|organism=Fucus serratus male|type=mRNA|length=4447bp|location=Sequence derived from alignment at F-serratus_M_contig12:865372..869818- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig12:865372..869818- >mRNA_F-serratus_M_contig12.1551.1 ID=mRNA_F-serratus_M_contig12.1551.1|Name=mRNA_F-serratus_M_contig12.1551.1|organism=Fucus serratus male|type=CDS|length=1074bp|location=Sequence derived from alignment at F-serratus_M_contig12:865372..869818- (Fucus serratus male)back to top |