mRNA_F-serratus_M_contig12.1537.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE) HSP 1 Score: 181 bits (458), Expect = 2.370e-49 Identity = 97/153 (63.40%), Postives = 116/153 (75.82%), Query Frame = 1
Query: 19 GLLRHHFVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRARNASPPLGSEAKGNLVILGALLAAAAVLVARTDFDDL 477
GLL FVP+LVSN VFL++ Q++SVS+VNFKGRPFM GILE+ AIFLPAVSIVAF FAL LE+VP N +L+L PFPS+ AK+ +L +M VSL P VDRLCV+LFDP LH+AR A PPLG K NL +LGALL AV V+ DF+ L
Sbjct: 602 GLLGPKFVPNLVSNAVFLLATIQSISVSIVNFKGRPFMAGILENSAIFLPAVSIVAFCFALVLEIVPPINAVLELKPFPSIAAKLSILASMLVSLLAPLAVDRLCVKLFDPELHKARKAGPPLGMVEKRNLALLGALLLVVAVSVSGMDFEAL 754
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI) HSP 1 Score: 147 bits (371), Expect = 3.650e-37 Identity = 97/226 (42.92%), Postives = 116/226 (51.33%), Query Frame = 1
Query: 19 GLLRHHFVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKL-------------------------------------------------------------------------LQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRARNASPPLGSEAKGNLVILGALLAAAAVLVARTDFDDL 477
GLL FVP+LVSN VFL++ Q++SVS+VNFKGRPFM GILE+ AIFLPAVSIVAF FAL LE+VP N + L+L PFPS+ AK+ +L +M VSL P VDRLCV+LFDP LH+AR A PPLG K NL +LGALL AV V+ DF+ L
Sbjct: 1529 GLLGPKFVPNLVSNAVFLLATIQSISVSIVNFKGRPFMSGILENSAIFLPAVSIVAFCFALVLEIVPPMNAVGDCVQLTCSCFVRVFAICLERALGRTGTCGYELWLGLLYSTTLCWASEASDVDGHALYLPRLYFRLSIFNPTVLELKPFPSIAAKLSILGSMLVSLLAPLAVDRLCVKLFDPELHKARKAGPPLGMVEKRNLALLGALLLVVAVTVSGMDFEVL 1754
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A7S0J7G5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J7G5_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 8.110e-17 Identity = 57/141 (40.43%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLH----------RARNASPPLGSEAK--GNLVILG 423
F+P+L++ VFLV +Q ++V +VN+KGRP+M+GI E+ +FL + VA A A L P N L+ L PFP+ ++ V+L + SL G L DRLCV LF P + R +A P L S K G L++LG
Sbjct: 411 FMPNLLNTCVFLVETSQCIAVLLVNYKGRPWMKGISENHPLFLSVFACVAGCAACAWGLFPELNALIHLEPFPNDEFRMKVMLLVATSLLGTFLWDRLCVALFAPRIFGAMLDEARKTRPADALPALASLGKVLGVLLLLG 551
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A482RVH1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVH1_9ARCH) HSP 1 Score: 87.8 bits (216), Expect = 1.810e-16 Identity = 44/110 (40.00%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRA 366
F+P+L+++VVFLV +Q +SV N+KGRP+M+G++E+ +FL + +A +A E VP N+L+Q+APFP + VL + ++ G + DRLC+ F P + RA
Sbjct: 1143 FLPNLLNSVVFLVETSQMISVFFTNYKGRPWMKGMMENHPLFLSVFACIAGVTVVAWEFVPQLNELIQIAPFPDDSFRYKVLFLVISTIIGTFVWDRLCIWFFAPRIFRA 1252
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A7S0AQA0_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AQA0_9DINO) HSP 1 Score: 87.0 bits (214), Expect = 3.380e-16 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRA 366
F+P+L++ VVFLV Q V++ VN+KG+P+M+G+LE+RA+FL + A A EL P N L+ L+PFP + V+ + +L G + DRLCV LF P + RA
Sbjct: 1297 FLPNLMNTVVFLVETAQTVAILFVNYKGQPWMKGVLENRALFLSVFIVAGSVAAAAWELSPELNALIHLSPFPDDRFRWGVMALVGTTLAGTFMWDRLCVALFAPEIFRA 1406
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A7S3HB53_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB53_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 4.200e-16 Identity = 43/110 (39.09%), Postives = 69/110 (62.73%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRA 366
F+P+L++ VVFLV +Q +SV N+KGRP+M+G+LE+ +FL + + A E VP N+++QLAPFP + V++ + ++ G L DR CV +F P + +A
Sbjct: 95 FLPNLLNTVVFLVETSQMISVFFANYKGRPWMKGMLENHPLFLSVFACIGGVIVAAWEFVPQLNEMIQLAPFPDDYFRYKVVVLVASTILGTFLWDRFCVFMFAPKVFKA 204
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A7S3UVI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI2_HETAK) HSP 1 Score: 86.3 bits (212), Expect = 5.340e-16 Identity = 60/135 (44.44%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 1 PPPPRGGLLRHHFVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRARNASPPLGSEAKG 405
PP PR LR F P++ SNVVFL+S Q++S+ VNFKGRPF G LE A F+ V AF +LE PA NKLL LAPFP++ K +LLAM + + H ++ R F P L A P G +G
Sbjct: 471 PPNPR---LRREFRPNVRSNVVFLMSLVQSLSIIGVNFKGRPFKTGALEIPAFFVSMVLFAAFVVLCSLETNPAVNKLLGLAPFPNVLIKGIILLAMALDVALAHKWNQAMTRRFLPELAAAGGG--PGGGHGRG 600
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A0L0DKD0_THETB (P-type ATPase superfamily n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DKD0_THETB) HSP 1 Score: 85.1 bits (209), Expect = 1.550e-15 Identity = 52/134 (38.81%), Postives = 77/134 (57.46%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRA--RNASPPLGSEAKGNLVILGALL 432
F P+L++ VVFL+S Q V V VNFKGRPFM GI E+RA+ +V AF A E+ P N+ LQL FP + ++L + V + G ++DRL + +F P + ++ ++ P + NL+ LGA L
Sbjct: 1270 FEPNLINTVVFLISSVQNVCVFAVNFKGRPFMYGITENRALMWSLGLVVLGAFVCAFEVSPMFNEALQLVAFPDGAFRSTIVLLLLVDVAGTFVLDRLLLAIFAPAIFKSSLKDIDGPTVARVVRNLLGLGAFL 1403
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: A0A7S2I2T1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2I2T1_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 2.890e-15 Identity = 53/141 (37.59%), Postives = 78/141 (55.32%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRAR----------NASPPLGSEAK--GNLVILG 423
F+P+L++ VFLV +Q+++V +VN+KGRPFM+GI E+ +FL + V A A L P N L+ L PFP + V+ + +L G + DR+C LF P + +A +A P L S K G LV+LG
Sbjct: 1404 FMPNLLNTTVFLVQTSQSIAVLLVNYKGRPFMKGISENHPLFLSVFACVGGCIACAWGLFPELNTLIHLEPFPDDAYRFKVMALVLATLAGTFIWDRICTALFAPHIFKAMVDEAKTTTLADAMPALMSLGKVVGVLVLLG 1544
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Match: F0YFQ7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFQ7_AURAN) HSP 1 Score: 84.0 bits (206), Expect = 3.740e-15 Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 37 FVPSLVSNVVFLVSQTQAVSVSMVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFPSMGAKIPVLLAMTVSLFGPHLVDRLCVRLFDPGLHRARNASPPLGSEAKGNLVILGALLAAAAVLV 453
F+P+L++ VFLV +Q V+V +VN+KGRP+M+G+LE+ A+FL VA A + P N L+ LAPFP + ++ + SL G + DRLC LF P + RA+ A + A ++ AL AA +
Sbjct: 890 FLPNLLNTAVFLVETSQMVAVLLVNYKGRPWMKGLLENHALFLSLFLSVAGVVVCAWNVFPYGNSLIHLAPFPDDDFRWTIVGLVLASLAGTFVWDRLCTALFAPHIFRAQLAEGKKTTFADVQPILATALKVAAGTFL 1028 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1537.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig12.1537.1 >prot_F-serratus_M_contig12.1537.1 ID=prot_F-serratus_M_contig12.1537.1|Name=mRNA_F-serratus_M_contig12.1537.1|organism=Fucus serratus male|type=polypeptide|length=134bp MVNFKGRPFMRGILESRAIFLPAVSIVAFAFALALELVPAANKLLQLAPFback to top mRNA from alignment at F-serratus_M_contig12:485708..487724- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig12.1537.1 ID=mRNA_F-serratus_M_contig12.1537.1|Name=mRNA_F-serratus_M_contig12.1537.1|organism=Fucus serratus male|type=mRNA|length=2017bp|location=Sequence derived from alignment at F-serratus_M_contig12:485708..487724- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig12:485708..487724- >mRNA_F-serratus_M_contig12.1537.1 ID=mRNA_F-serratus_M_contig12.1537.1|Name=mRNA_F-serratus_M_contig12.1537.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig12:485708..487724- (Fucus serratus male)back to top |