mRNA_F-serratus_M_contig12.1530.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig12.1530.1
Unique NamemRNA_F-serratus_M_contig12.1530.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A6H5JHR7_9PHAE (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 7.390e-91
Identity = 140/227 (61.67%), Postives = 172/227 (75.77%), Query Frame = 2 
Query:   47 RRHIITYALLSVGVRAFILSPASLSRRNVADWVGGPL--QPQHSSMSMNAAPLEGVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEEDY 721
            R  ++  ALL  G RAF+++P  LS R         +    +  S+SM AAPLEG HG RSRFLP+DQ+D++ ++PRIVQVAG L ++T+ADIMAVG TP PE+GMWQYDFSDPEGPQ+GTVA+PG E V+ M EPV +V PN DLNIQMP  E  E+L+ +DRANREFE GKFFLWDTP  GL VR+FE G P PGF C+GRVG+V+ P++PSMAKK +GFEEEDY
Sbjct:    7 RTCVVACALLLAGARAFVVNPTLLSSRAPGGGSAAAVGTSGRTGSLSM-AAPLEGAHGMRSRFLPVDQMDDEVFAPRIVQVAGVLPEITVADIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFKMKEPVAIVCPNDDLNIQMPNDEKAEMLLVIDRANREFEFGKFFLWDTPSDGLVVRYFE-GEPTPGFACVGRVGIVLAPFLPSMAKKSSGFEEEDY 231
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: D7G2G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G3_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 6.090e-54
Identity = 92/151 (60.93%), Postives = 111/151 (73.51%), Query Frame = 2 
Query:  269 RIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEEDY 721
            R+ QVAGAL ++T+A IMAVG TP PE+GMWQYDFSDPEGPQ+GTVA+PG E V+NM EPV +V PN DLNIQMP  E  E+       NREFE GKFFLWDTP  GL VR+FE G P PGF C+GRVG+V+ P++PSM  +     +  +
Sbjct:    6 RMEQVAGALPEITVAYIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEM-------NREFEFGKFFLWDTPSEGLVVRYFE-GEPTPGFACVGRVGIVLAPFLPSMTPRPPRLRDTTH 148
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: D7G2G1_ECTSI (RuBisCo_chap_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G1_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.720e-51
Identity = 93/156 (59.62%), Postives = 115/156 (73.72%), Query Frame = 2 
Query:   47 RRHIITYALLSVGVRAFILSPASLSRRNVADWVGGPLQPQHSSMSMNAAPLEGVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEV 514
            R  ++  ALL  G RAF+++P  L  R      G     +  S+SM AAPLEG HG RSRFLP+DQ+D++ ++PRIVQVAGAL ++T+ADIMAVG TP PE+GMWQYDFSDPEGPQ+GTVA+PG E V+NM EPV +V PN DLNIQMP  E  E+
Sbjct:    7 RTCVVACALLLAGARAFVVNPTLLPSRAPG---GVGASGRTGSLSM-AAPLEGSHGMRSRFLPVDQMDDEVFAPRIVQVAGALPEITVADIMAVGFTPAPEMGMWQYDFSDPEGPQLGTVAVPGGEQVFNMKEPVAIVCPNDDLNIQMPNDEKTEM 158
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A836C9L5_9STRA (RuBisCo_chap_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 4.000e-47
Identity = 85/171 (49.71%), Postives = 113/171 (66.08%), Query Frame = 2 
Query:  203 GVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEE 715
            G+HGT SRFLPI Q+  + + PR V +AGA   +T  DI A  S  P E G WQYDF+DPEGPQMGTVALPG + V ++++PV++V  +  L I +P     EVL  VDRA  +F+ GKFF+W  PD  + +R+F+  P   G+QC+GRV  V VP++  M K  +GFEEE
Sbjct:   53 GLHGTGSRFLPIVQIGAREHYPRTVCIAGAYPGLTAEDIAAPTSGEPAEQGTWQYDFTDPEGPQMGTVALPGGDTVTDLIDPVIIVAASDSLGISLPQDATTEVLAVVDRAEVDFQEGKFFVWQAPDKSVIIRWFKQEPQ--GYQCLGRVVFVHVPFLDVMKKPSSGFEEE 221
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A7S3PYS7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYS7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 6.530e-40
Identity = 85/216 (39.35%), Postives = 130/216 (60.19%), Query Frame = 2 
Query:   92 AFILSPASLSRRNVADWV---GGPLQPQHSSMSMNAAPLEG-VHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPA--GEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAP-GFQCIGRVGLVMVPYVPSMAKKFTGFEEED 718
            + I+S  +L+  +V  WV   G  L+   S +       +G +HG  S F+P++Q+DE+ ++PRI+Q+AG    VT  +I++V S  P E G W YDFSDP+GPQMGTVALPG E++    +P V++  +  L + +P    + V++LV VDRA + F   KF + D P  G+ ++ +      P G + IGRV  V VP++P M KK +GF+E+D
Sbjct:    4 SLIVSTLALAT-SVEGWVSQNGPALRKNTSKLFSQEIGTDGNLHGESSCFMPLEQVDEEYFAPRIIQIAGMYPGVTKEEILSVTSEQPAEKGQWAYDFSDPDGPQMGTVALPGCEIIDLCEDPAVIIAEHFALGVPLPEVLTDPVDLLVVVDRAKKTFAERKFLVMDVPGKGIVIKAYSTKAEMPEGGEVIGRVDFVQVPWLPCMKKKKSGFQEDD 218
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A7S2FVK7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FVK7_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.690e-39
Identity = 88/223 (39.46%), Postives = 128/223 (57.40%), Query Frame = 2 
Query:   59 ITYALLSVGVRAFILSPASLSRRNVADWVGGPLQPQHSSMSMNAAPLEGVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEE--DY 721
            I  A L+VG  AF ++P  L  +  +  +      +  + +M+  P  G HGT S+F+P+ QLD + Y+PR VQVAG L  +T  +  A  S P    G WQ+DFSDPEGPQMGT+A PGS  V    +PV +VT +  L+I +    + EV+V +DRAN EF   KFFL+        +++    P   G + +GR+ LV +P++ +M KK +G+ EE  DY
Sbjct:    4 IVLACLAVGSDAF-MAPHRLGVKRGSSSIELGSVAERPAPTMSEGPPMGQHGTGSKFMPLTQLDSEEYAPRTVQVAGVLPGLTKEEFYAPQSAPAAPPGQWQFDFSDPEGPQMGTIAFPGSANVQACEDPVAIVTNSAHLHISLANNVEAEVVVLIDRANTEFYNNKFFLFADAAGTTYLKWQSELPE--GHEVLGRIMLVQIPFLSTMGKKTSGWMEEADDY 223
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A6U0INQ8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0INQ8_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.400e-38
Identity = 86/212 (40.57%), Postives = 124/212 (58.49%), Query Frame = 2 
Query:  128 NVADWVGGP--LQPQHSSMSMNA-APLEG---------VHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPA--GEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAP-GFQCIGRVGLVMVPYVPSMAKKFTGFEEED 718
            +VA + GG   + P  SS+S    AP            +HG +S FLP+ QLD+  Y+PRIVQ+AGA   +T  +I AV S  P   G W YDFSDP+GPQ+GTVAL GS++V+   + V ++  +  L + +PA   E V+V+V VDRA   F   KF ++D P  G+++  F+     P G   +G+V LV +P++P+M    +GF EED
Sbjct:   12 SVAGFRGGQAWVSPHSSSISTRGGAPTRATSQLKAAGSLHGDQSCFLPLKQLDQDYYAPRIVQIAGAYPGITAEEIAAVSSEEPSVPGQWTYDFSDPDGPQLGTVALEGSQVVHGCEDAVAIIAEHPSLGVPLPATLAEPVDVIVLVDRARNYFSERKFLVFDNPAAGVEIGAFQTKTEIPEGSTILGQVVLVQMPWLPAMKPTKSGFMEED 223
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A7S2YFZ8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YFZ8_9STRA)

HSP 1 Score: 149 bits (376), Expect = 7.580e-38
Identity = 76/181 (41.99%), Postives = 112/181 (61.88%), Query Frame = 2 
Query:  194 PLEG---VHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAG--EDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAP-GFQCIGRVGLVMVPYVPSMAKKFTGFEEED 718
            PLE    +HG  + F+P+ QLD+  Y+PRIVQ+AGA   +T  + M+V S P PE G W YDFSDP+GPQ+GTVALPGSE+V+   +PVV++  +  + + +P    + V++++ VDR    FE  KF +   P   L++  +E     P G   +GRV +V +P++P+M    TGF E D
Sbjct:   32 PLEAEPKIHGEGACFMPLKQLDQDHYNPRIVQIAGAYPGLTKEEYMSVTSEPSPERGQWTYDFSDPDGPQLGTVALPGSEIVHFAEDPVVIIAEHPSVGVDLPKAIVDPVDLILFVDRGKTGFEERKFMVLGMPSGELKIGAYEEQKDIPEGTDILGRVEMVQIPWLPAMTPTKTGFLEAD 212
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BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: W7TQ11_9STRA (RuBisCo_chap_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ11_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.140e-37
Identity = 77/180 (42.78%), Postives = 109/180 (60.56%), Query Frame = 2 
Query:  182 MNAAPLE-GVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEED 718
            +++A L+ G+HGT SRFL I QL      PRI+ VAG    +T  ++MA  STP P  G W Y+FSDP+GPQ+GTVA P S LV+  V+PVV++  N  L I +    D+E +V VDR +R F+  KF+ +  PD  + +R+FE  P   G+  +GRV  V +PY     +  +G+ E D
Sbjct:   63 LSSAQLQDGMHGTGSRFLSIQQLKGDELMPRIIPVAGVYPGITADELMAPTSTPSPSYGRWAYEFSDPDGPQVGTVAFPASTLVHACVDPVVVIATNDALGIDLAGEHDIEAMVLVDRGDRFFQTNKFYAFAAPDGSVVMRWFEQVPA--GWVLLGRVHYVTLPYTEKTGRFKSGWMEVD 240
[Close]
BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Match: A0A7S0SS11_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS11_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.890e-37
Identity = 73/172 (42.44%), Postives = 107/172 (62.21%), Query Frame = 2 
Query:  203 GVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIADIMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTPNKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENGPPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEED 718
            G HG   ++LP  + +   Y PR + +AG   ++T  ++ AV S+P P++G W YDF DP+GPQ+GTVALPGS+ +Y   +PV+L+T N DL I++   E+VEVL+ +DRA R  +   FFL+  P+  L +    +    P +  +G+V LV +PY  SM  K TGF EED
Sbjct:   46 GRHGQNFKYLPTYRANGDEYYPRTLPIAGTYPNITPEELFAVSSSPKPQLGTWSYDFIDPDGPQLGTVALPGSDTLYLADDPVILITRNIDLGIKLT--EEVEVLLVIDRAVRTHDNENFFLYQAPNNELDI--LNSNDIIPDYNILGKVALVFLPYTESMRPKRTGFLEED 213
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig12.1530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHR7_9PHAE7.390e-9161.67RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
D7G2G3_ECTSI6.090e-5460.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2G1_ECTSI2.720e-5159.62RuBisCo_chap_C domain-containing protein n=1 Tax=E... [more]
A0A836C9L5_9STRA4.000e-4749.71RuBisCo_chap_C domain-containing protein n=1 Tax=T... [more]
A0A7S3PYS7_9STRA6.530e-4039.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2FVK7_9STRA2.690e-3939.46Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6U0INQ8_9STRA1.400e-3840.57Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2YFZ8_9STRA7.580e-3841.99Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
W7TQ11_9STRA1.140e-3742.78RuBisCo_chap_C domain-containing protein n=2 Tax=M... [more]
A0A7S0SS11_9STRA1.890e-3742.44Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig12contigF-serratus_M_contig12:164603..172551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue1.6e-46
Seed eggNOG ortholog2880.D7G2G3
Hectar predicted targeting categorysignal peptide
EggNOG OGs2E2ES@1,2S9NI@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1845
Cds size708
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig12.1530.1prot_F-serratus_M_contig12.1530.1Fucus serratus malepolypeptideF-serratus_M_contig12 164619..171430 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929102.103707-UTR-F-serratus_M_contig12:164602..1646181622929102.103707-UTR-F-serratus_M_contig12:164602..164618Fucus serratus maleUTRF-serratus_M_contig12 164603..164618 +
1690962705.5216866-UTR-F-serratus_M_contig12:164602..1646181690962705.5216866-UTR-F-serratus_M_contig12:164602..164618Fucus serratus maleUTRF-serratus_M_contig12 164603..164618 +
1622929102.1940346-UTR-F-serratus_M_contig12:171430..1725511622929102.1940346-UTR-F-serratus_M_contig12:171430..172551Fucus serratus maleUTRF-serratus_M_contig12 171431..172551 +
1690962705.567402-UTR-F-serratus_M_contig12:171430..1725511690962705.567402-UTR-F-serratus_M_contig12:171430..172551Fucus serratus maleUTRF-serratus_M_contig12 171431..172551 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929102.1312778-CDS-F-serratus_M_contig12:164618..1647861622929102.1312778-CDS-F-serratus_M_contig12:164618..164786Fucus serratus maleCDSF-serratus_M_contig12 164619..164786 +
1690962705.5320067-CDS-F-serratus_M_contig12:164618..1647861690962705.5320067-CDS-F-serratus_M_contig12:164618..164786Fucus serratus maleCDSF-serratus_M_contig12 164619..164786 +
1622929102.1510727-CDS-F-serratus_M_contig12:169890..1701001622929102.1510727-CDS-F-serratus_M_contig12:169890..170100Fucus serratus maleCDSF-serratus_M_contig12 169891..170100 +
1690962705.5400293-CDS-F-serratus_M_contig12:169890..1701001690962705.5400293-CDS-F-serratus_M_contig12:169890..170100Fucus serratus maleCDSF-serratus_M_contig12 169891..170100 +
1622929102.165583-CDS-F-serratus_M_contig12:170875..1709831622929102.165583-CDS-F-serratus_M_contig12:170875..170983Fucus serratus maleCDSF-serratus_M_contig12 170876..170983 +
1690962705.548867-CDS-F-serratus_M_contig12:170875..1709831690962705.548867-CDS-F-serratus_M_contig12:170875..170983Fucus serratus maleCDSF-serratus_M_contig12 170876..170983 +
1622929102.1787868-CDS-F-serratus_M_contig12:171208..1714301622929102.1787868-CDS-F-serratus_M_contig12:171208..171430Fucus serratus maleCDSF-serratus_M_contig12 171209..171430 +
1690962705.5578163-CDS-F-serratus_M_contig12:171208..1714301690962705.5578163-CDS-F-serratus_M_contig12:171208..171430Fucus serratus maleCDSF-serratus_M_contig12 171209..171430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig12.1530.1

>prot_F-serratus_M_contig12.1530.1 ID=prot_F-serratus_M_contig12.1530.1|Name=mRNA_F-serratus_M_contig12.1530.1|organism=Fucus serratus male|type=polypeptide|length=236bp
MPLRTPPVMRRRHIITYALLSVGVRAFILSPASLSRRNVADWVGGPLQPQ
HSSMSMNAAPLEGVHGTRSRFLPIDQLDEQTYSPRIVQVAGALSDVTIAD
IMAVGSTPPPEIGMWQYDFSDPEGPQMGTVALPGSELVYNMVEPVVLVTP
NKDLNIQMPAGEDVEVLVAVDRANREFELGKFFLWDTPDTGLQVRFFENG
PPAPGFQCIGRVGLVMVPYVPSMAKKFTGFEEEDY*
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mRNA from alignment at F-serratus_M_contig12:164603..172551+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig12.1530.1 ID=mRNA_F-serratus_M_contig12.1530.1|Name=mRNA_F-serratus_M_contig12.1530.1|organism=Fucus serratus male|type=mRNA|length=7949bp|location=Sequence derived from alignment at F-serratus_M_contig12:164603..172551+ (Fucus serratus male)
GGACAGAAGACCAAAGATGCCTCTGAGGACGCCTCCAGTAATGCGACGAA
GGCATATAATTACGTACGCATTACTTTCAGTGGGAGTTAGAGCTTTTATC
CTTAGTCCGGCGTCGCTGTCTCGTCGAAATGTCGCCGACTGGGTGGGGGG
TCCGTTGCAGCCACAGCACAGCAGCATGTCCATGGTGAGAACCGCTGCTG
TGGTTGACTCTGGTCATCGACCAGGGATTGCGTTGCTCCTTCGTGAGTTG
TCTTGTTTGAATTTAATCTGCTGAAGTTAGAGAGCGATCCTGTTTGACAC
TTGTCGCAGCTGGATGCCACAACCATGACATGCGCCTGGTGTTCATGTTT
CGCTTCATGCTGCCAGGTGTCATCGTAAGGTTCGTTTCCAGATACATGAT
AACAGTAACTTTTTACAGCCATACCCTACTTTTTACAAAAAATCTGGACG
CACCCGATGAGAGGGAAATGCTGCCAGATCCCAACCAAGCGGTTATAAAT
GGGACAACAAATATACATGGGATTCAGTTGGGTTCCCCGATGATCGTCGC
ATAGGGTCCAATAGTTCAAGATCGGGAAGAAGCACATCGTTACACGTTAC
ACTTACACTTATGGTCGCCATGTATGATTCGCCATGCCGTAGGCACTCTC
AACGTGCCCACTCCATACGATTAGTGGGTGGGAGAAAGAGAGGTGCATAT
CAATTGGTCCATAGTGACCTGCCAAGGCAGCACTCATTCGGAACTACCTT
GAAGTTTACTGGCCCTGTGCCGGTGGACCTTCGGCAGTGTCGGCAGTGAA
CGCCATCGGTACGCAATTGCGTGACCCGATAAACTCGGGACTGGCCCGAT
GGCGTCTGGCAGTTTAAAATATATAAATGGACGCCGCCGCGGAACTCGGG
AGTAAGCACCAGATTCAGCCTGGGTATGGAGATGGGCAGGCTGCCGCGGG
GCGGGACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGC
GGACAGGAAAATATCAACTTTCCCTGTCCAGCTGTCCACGTGCAGGATTG
GCAACCTTACCCGGTTTGATCCGTACTCTTGCTACATGTGTGGTCCACGT
GCAGGATTGGCAACCTTACCCGGTTTGATGTATGGTCACACATGTAGCAA
GAGTATGGATCAAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTG
AACAGGGGAAATAAATATTTTCCTGTCCCCGTTCGCGCCTGAGAATTTGG
TCTCACGAGATACGATCGGCCTTCCCGTTCCGCGTCAGCCTACTCATTCT
CCACACTCTATTAACAAGCTGAATCTGATAGAGGTACGCAACAAAAACAG
GGACGCAAAGGTGGACGCGCGCTATGATATCTGTTCTATTACTAATAGTT
CAATAAACGAAGTGTGTCGAAGAGGAGAACCACCCCTCAAGTCGCGAACG
CAATACAGTAGACACCAGAAACCGATTTCACCTGTGTTGACGGTACTGTA
TACGAGATGAAGTATGAAGTAAGAAACAGATAAGCGAGGACGGCGCTAGG
CTACCGGTCAAAGCTATAATATGAATACTGTCCCCCGCCTGCTCAACAAA
AAAGCCCCTACACAAGGCAGAAAGGTCTAGTAATAGCTGGGACCCGGAAC
TCCAACACCGAAACTTCTTCTATTGTACCAGTATTACAAATAAGCGGTGC
TATGCCTAATAATATTACCATCAACCGCCATCATACACGCCGGTACTTTC
AACATGCCCACATCATACCGATAGTGGATATGGGAAGGAGAGACGCATAT
GAATTGCTCCATGTTAACCTGCCAAGGCAGCACTCGTTCGGAATTACCTT
GTGGTTTACTAGCCCTGTGCCGGCAGACTTTCGGCAGTGAACGCCATCGG
TACGCAATTGCGTGACCCGATTAACTCGGGACTGACCCGATGCCGTAGTA
CCTGTATCAGCCTGAGTATGGAGATGAGCAGGCTGACACGGGTCGGGACT
GCTGAACCCGTATCGCGAGACCAAATTCTTAGGCGCGAACGCTGACGGGA
AATATTCATTTTCCCTGTTCAGCTGACCACGTGCAGGATTGACAATCTGA
CCCGGTTGATCCACCCAAACGTTCAGATTTTTCTTTCAACAAAGCACAGA
CTGTTGTAGCTCTCTTCTGCCAGTAGCTCCATGAGTCGTTTGTACCTGCT
CAAGCGTAAAACAGCGAATTATGTTCTTGTGCACCTTTAATTACCTCGAA
CGATAATACTGCACGCGATCATCTGCGCTGCTTTTGTCACCTTCTTTCTC
TGGTTTGATCGATTGCCTACTAAACTGTGTGCGCCCTTTTTTTTTTTGGG
GGGGGGGGGGGGGGGGCATGTCGCTTTTTCCGAGTATTTAGGTACCAGTA
CCGTTTTCCCCTTGTATGGAGATTAGAGTACGTCGTACGTTTTCCCCTTC
CGGGTGGTGTTTTTCTACTATAATACTAATACCTTGTGGCCACGGGCTGA
ATGGTGATTTTTGACATCAGCTTATTATGTGAGAACTAAATCAATCAATC
AATCAACTAATCCAACGAGTGATCAATCAACCAATGAGTGATCAACCAGT
ACAAGTATTAAATAGTCACCAGTCACCGCGCTAGTAAAAGAGCACCGGCC
GACCCAAGATCCTGCACAGATCGTGATGCGGCGGTCACGTTCGAACCTGC
GCTTGGGCTCGAATTCCTCCAACAGGTGTTGAGGATGTCCTCTTCCTCCA
CATCCGATGCATAATACCTGCATAATACCTGTATAACTTTGAGGCACCTT
CTCGCTGTATAATACCTGCATAATGTATAATACCTGTTATATTACCTGTT
ATAATACCTGATATATAGATCTAACTCACACTCATCGGCCAACGAAGCGC
AGTCTTCCGCTTATAACTTTGTTTAATGTATGTTACCTGTTATAATACCT
GTATGCTGAGTAATACCCGGTACCTGTTATAAAGCTCTATAAGGGCGGTT
CTTGTGGGAACAAAATCTTGTACAAAAATCTTGATCATACCCAAGATTTT
CCCAACAAGATTTTGTTTCACTCCTTATGGGGAAAAATGTTTTCTGAAAA
TCTTCCCAAGATTTTCAGATGGCCGGAAATGTGCCCTCTTGGCAAAAGCT
TAGCCCGAGATTTTCAAATGGCAGCCTTCACGAAAATCTTGGGGTGGCGA
GACATATCGATTGCGCCGCTTGTCTCCACGGAAAATCGTAATAGCACTCT
AAACAAAAACGCACACAGCATGTATATGGCGGTGACTGCGATGCAGCGAT
AGCCAAAGCTGCTGCCGCTGTGACTCGTGCACAGAGCCAGAGTCAGGAGG
TTGGTTCTGGCGATGAAGGGCTGGGTTTGTTTTGTTTTGATTTGTCATGA
GCAGAAACGGACTTTTGGTGGCTGGACGAGCAGTAGCTCTTCGCCTCTTC
CACGGAAAATTGCAAACCACTCTAAACAAAAACACACACAGCATATATGG
CGGTGACTGCGATGCCGCGATAGCCGAAGCTTCCGGCGCTGTGACTCATG
TACAGAGCCAGAGTCAGGAGGTTGGTTCTGGCGATGAAGGGCTGGGCTTG
TTGTGTTTCGATTTGCCATCAGCAGAAACGTAATTTTGATGGCCAGAGGA
CGAGCGGTAGAGACTTCGCCTATTTTCGTGTTTGGTGTGATATCTTATTA
CGTTCACCGTGGAAGCGGTCAAGCCCGTGTGCACCCATGACGGTGGTTGT
CCTTAAGCAGCCGAGCCCAAGCATTCACACTTCAAGGGAGGCATAGACGT
TTCGTCGGTGATTCCGCCTTCCATTCGTCTCTCCGTGGAGCTCCTCTCCT
TATTGGCGAGAAGTAGTATCATCAGATTCTGCAAAAGTACAGTGTTTGAT
GGCACATGACTACATGTACTGTATACCAGGTGTACTGTTGTACACCAGTA
TGTACTTTGACTTGTTGGCTATACTGTTGCTTTCGTCAAATTTATGGTGC
AAGTATAACAGTAGTAGACTAGGTCTCTAGTCTATACTGTTCACCGAAAC
AGGAAGCGCTTCCTCCTGTCACAATCAACGCTTCGAGAAGGGTTTGTTGA
GAGAAAGTACCAGGTGTTTGATACAACAGGCCTTCTAATCATCTAGTCAT
AGTCCAAGTGAACCTCTCTTTTCCGGTGGAGCAAGTTTAACCCTTTCGGA
ACTCGTTTGCAAGTTTTATATTGTATAATGTATGGAAAAAAGCAGACCGG
GTACCAAGAGGGTTAAAAGTCGTGGAATTTTGGAGCCTGTAGTTCTGTAG
GTAGTGTACAAAAATTATAAGAGTGGCGCATTCTTGCCGGGCTGTGTTTG
TGTTATTCTACCGACAATGACTAGGGTGAAAACCTCCACATACGCTGGTG
TCCATGCTTCACTGGTAGTGGTACTGTAGAGCTACAGCTTTGTCTGCTCT
TGCAAATTTTACCCTCTTGTTCAGAAAAAAAGTACGTTGCTATTTCCAGC
CTCGGCATTTTGAATTTTGTATCTCCCCCGAATAGAAGAGCATCTACAAG
TTTGTCGAAACCATGCCCAAACTTGACATTTCCCCATCAATATTTTTTCC
CCATAACGAGCATGACAAAATCTTCGACGGCAAGATTTTCGCACCAAAAT
CTTGTCGAAAATTTAAATATTTTTGTACGAGATTTTGTTCCCATAAGGAC
CGCCCTAACTCACACTCATCGGCCAACAAAGCGCAGTCTTCTCCAAGAAC
TTTCGCTCGACCGCTATGTTCCTCAGCCAGATTTTTCTTAAGACACCTCT
ATTCCTGAGCCGACGGGTCTTGCGAGCCGAGAGCCTAGTCGAAGATGTCC
TCGGTCCCGTCACGTCGCACACCCTAGTGATTCCTAAGGTTTCTAGGAGT
ATCAAACTGGTATTCTTCGTGTAGAGTCACTCGCCATCAGACCCCCTAAA
ATATAATGTCAAAGTCCACCCCTAAGGTATATCATAGTTTACCTGGTGTA
TTAATAGCTCTTTTTTCTTCCACTGACATTATAAAGCATACCGGTAGTCA
ATACCAATAGACTATGCTTTAATGCCTCACTCACTCATATATTATTTATT
ATATGTAGTACGACTGTCGTGCAAACCTATCTGCCTCTCTATTATATGTA
CCACGACTGTTACTCATAACAAATAAATCCAACGGCACAAGACAAGATTG
CTGCCAGTTCCCCCCACCCCAGCCTTGGGCACTGACATCTCCTCCACCCT
CATCGCCACACACGAATAACGTACCCTCGTTCCTGCAGAACGCTGCGCCG
CTGGAGGGGGTCCACGGCACGAGGTCGCGCTTCCTGCCCATCGACCAGCT
CGATGAGCAGACGTATTCGCCTCGTATCGTGCAGGTGGCGGGGGCGCTGT
CTGACGTAACCATTGCGGACATTATGGCAGTTGGCTCCACACCGCCTCCA
GAGATTGGGATGTGGCAGTACGACTTCTCCGACCCCGAAGGTCCCCAGGT
GGGCGCGAAACTCTCAAAAAGGAACACTTGCGAACAGGTGTAATCGAAGT
TTTGTACGGTATATATAAGAGGGAGAACAGACAGAAGACCTGTGGATGCA
AGTTCTTGAAGAAACAAGTGGTTCCTCTCGAGCAAATAGTTTTCTCCCCG
GAGAGCTGACTTGAATCTACACGGCCGTAGTGGTGCTCACAGAACCTGCG
TCACCCTGACCCGTTATGGTTTCGGTTTTCGTTGTAAGAGTTTGAGCGGG
GGTGTTGTAGCCTATCGCGAGAGTTCGTTGATGTACAAGGGTGCGGTCAA
GGGCCAGTCGAACATCGACGAACCAACCTTTTTAAAGGTACGATGGATGC
GACTCCCTCGGCTGGAAGATCACGCGCCCGAAATAGCCGCTCCTCCCGAG
GACCCGTGGCCTCGAGGCGTTTAAAGGATTTTCGTTCGGGGTGTATGCCT
CTTGGTAGAGAGCTTTCAACACATAATGCTTCCAGAGAGGGTCTTGAGTA
TCGTGTGGGAACGACCATTGTCATCCGGAGACGTGATTGGGTTAGCACTC
ACCTTTGAGCGTCAAGCAACGAGTACGCAAAATACCGTGGCTTGGTTGTT
CATCTCTCGGTACAGGCCGCAGCCGTTTGTCCACTGTCTTGCACGCGGTA
CTTTGGGATGAATCTTACAGGCACGATGCATCTCCACCTCTACGCACACG
TCTAACTTGGCAATCTCTTCTCCTGCCCCTCGACATTTGCATCTCTCCCA
ACGAACGACTCTCCCATTTTTAGATGGGCACGGTTGCTCTGCCCGGGAGC
GAACTCGTGTACAACATGGTGGAACCAGTGGTGCTAGTCACCCCTAACAA
GGACCTGAATATTCAGATGCCGGCAGGCGAGGTGCGAATAACAGACGACA
AAAACTACCCCACCTTCTATGTTCAAACCCCTTGAGGCCTCAGATTCTAA
GGGGCTATCTGTTGGGCGTAACCTTTTCGCGTGCAACCGCAGCGTTGGGA
CGAGGAATAGGACAAACGCATCAAGAGTGCCCCACATGGTCCGCTCGTTA
GAACCCCCCCCCCCTCCGCCCTCGCCACTTGTCTGTGGAAAACCCCTTGC
TGCCAGGACGTGGAAGTGCTAGTGGCAGTTGACCGAGCGAATCGAGAGTT
CGAGCTGGGCAAGTTTTTCCTGTGGGACACGCCCGACACGGGCTTGCAAG
TTCGTTTTTTCGAGAACGGTCCACCCGCTCCGGGTTTCCAGTGTATAGGG
CGGGTTGGTTTGGTGATGGTGCCTTACGTGCCCTCGATGGCGAAAAAGTT
CACGGGCTTCGAAGAAGAGGATTACTGACCCATCGTAATCTTCGACTAAT
AGTATTAATATTAATAGTAATATTCTATACTATTAATAGTACCGGGGCAT
GATCGGGGGGGGGACCGGGGCCAGAGCGTTTATTGGCGGGAAAGAAGAAA
GAGGCAACTTGGCTTGTAACGTAACGGTAGGCTATCGGATGATTTGAGGT
GGGCTTGATTCAACGTTGTAGTTTCCGTTTCTCCGACGCGGTCGCGCGAC
GACGTAACGATCCAGATATTTTTGTCTACAGCGATGGTGCACGAATGAAA
GTTTGTATATCGGGGTCGAGCCACCGCGCGCTTCTACCAAGAGTGTGACG
ACTTGTATTATAGTCAACCGATAGAGGTATAGAGTAAAGCATGGTGGAGC
CGGGACGTGCATGTCTGGAGCAGGGCGTGGATGCATTTTGGGATGCTGCT
GCTTCTTAGTCGTGGACAAATCTCACGTTGTACCAAGGTGACCAATGCTG
GAAAGAGCGCCCTTGATTTTTTGGTGTGTTCGAAGCTTCGAAACACATTT
ATAGTGCTTCCTTCTAGGGCTCTAAGCACCCGTAAGGCGCGTTACAGCAG
GTTCCGGGGCACTCGTGGGCTTCACGTCGTTTTTCTCGTTCACGTTTTGC
CGGGGCGGCGAGAAACGTCCTTGGGGCGTTCGCAACTCATCGATATTCAT
CCACTTTATAAAACCAACTTCCGTTTATGAAAGTATTCCGTCTACAGTAG
TCTACATTTTTAGCACGTGATGTCCGTTTGGAGAAGTGCAGCAGTGTTGC
CGTCATTGATCTAACATAATAAAACTTCTGTCCATGTTATATCTCGTTGA
TAGATGACACCACTACTAAAATCGAGAGAAAGTGCGGAATACGCACACAT
ATCCCACCAGAGGAAGAAGCCCTATTCCACAATACAATCATATGCCCAGT
TTGTTCCAAACTAGAAATACGTGTTGAAAGCGCACTCGCGATCTTGACAT
CAAGGGTGTTGGGAGTTGAGGCATCCATCCTCTCATTTCCCTTAAATTGC
AATTCGAGTTGTACGTATAACAAGAGTGCTATGGGAAATACGGTGCCTCG
CGTCTCTGTTAAGTGCCTATCAGTACCGCCGTTCGTCGGCGCTTGTTTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig12:164603..172551+

>mRNA_F-serratus_M_contig12.1530.1 ID=mRNA_F-serratus_M_contig12.1530.1|Name=mRNA_F-serratus_M_contig12.1530.1|organism=Fucus serratus male|type=CDS|length=1416bp|location=Sequence derived from alignment at F-serratus_M_contig12:164603..172551+ (Fucus serratus male)
ATGCCTCTGAGGACGCCTCCAGTAATGCGACGAAGGCATATAATTACGTA
CGCATTACTTTCAGTGGGAGTTAGAGCTTTTATCCTTAGTCCGGCGTCGC
TGTCTCGTCGAAATGTCGCCGACTGGGTGGGGGGTCCGTTGCAGCCACAG
CACAGCAGCATGTCCATGATGCCTCTGAGGACGCCTCCAGTAATGCGACG
AAGGCATATAATTACGTACGCATTACTTTCAGTGGGAGTTAGAGCTTTTA
TCCTTAGTCCGGCGTCGCTGTCTCGTCGAAATGTCGCCGACTGGGTGGGG
GGTCCGTTGCAGCCACAGCACAGCAGCATGTCCATGAACGCTGCGCCGCT
GGAGGGGGTCCACGGCACGAGGTCGCGCTTCCTGCCCATCGACCAGCTCG
ATGAGCAGACGTATTCGCCTCGTATCGTGCAGGTGGCGGGGGCGCTGTCT
GACGTAACCATTGCGGACATTATGGCAGTTGGCTCCACACCGCCTCCAGA
GATTGGGATGTGGCAGTACGACTTCTCCGACCCCGAAGGTCCCCAGAACG
CTGCGCCGCTGGAGGGGGTCCACGGCACGAGGTCGCGCTTCCTGCCCATC
GACCAGCTCGATGAGCAGACGTATTCGCCTCGTATCGTGCAGGTGGCGGG
GGCGCTGTCTGACGTAACCATTGCGGACATTATGGCAGTTGGCTCCACAC
CGCCTCCAGAGATTGGGATGTGGCAGTACGACTTCTCCGACCCCGAAGGT
CCCCAGATGGGCACGGTTGCTCTGCCCGGGAGCGAACTCGTGTACAACAT
GGTGGAACCAGTGGTGCTAGTCACCCCTAACAAGGACCTGAATATTCAGA
TGCCGGCAGGCGAGATGGGCACGGTTGCTCTGCCCGGGAGCGAACTCGTG
TACAACATGGTGGAACCAGTGGTGCTAGTCACCCCTAACAAGGACCTGAA
TATTCAGATGCCGGCAGGCGAGGACGTGGAAGTGCTAGTGGCAGTTGACC
GAGCGAATCGAGAGTTCGAGCTGGGCAAGTTTTTCCTGTGGGACACGCCC
GACACGGGCTTGCAAGTTCGTTTTTTCGAGAACGGTCCACCCGCTCCGGG
TTTCCAGTGTATAGGGCGGGTTGGTTTGGTGATGGTGCCTTACGTGCCCT
CGATGGCGAAAAAGTTCACGGGCTTCGAAGAAGAGGATTACTGAGACGTG
GAAGTGCTAGTGGCAGTTGACCGAGCGAATCGAGAGTTCGAGCTGGGCAA
GTTTTTCCTGTGGGACACGCCCGACACGGGCTTGCAAGTTCGTTTTTTCG
AGAACGGTCCACCCGCTCCGGGTTTCCAGTGTATAGGGCGGGTTGGTTTG
GTGATGGTGCCTTACGTGCCCTCGATGGCGAAAAAGTTCACGGGCTTCGA
AGAAGAGGATTACTGA
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