mRNA_F-serratus_M_contig1199.1520.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 2.410e-166 Identity = 252/409 (61.61%), Postives = 299/409 (73.11%), Query Frame = 3
Query: 84 MKVRKSQPLPWLFHRLLLLSACKTIQRTAAFGLDLRVRPVSVTPQHERVAK-SITQMHVVENTGLER-----------PVNRGAAMRNSFLFLVG----VAGAGTVRS---ESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKER-----DGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAFSLSILAEDVDKIAEDLGGTVGIDSVRGGPRSVSVFDPDGYLIKFVDYGDWLKELPTL 1238
MK R S + +LL+LS C I+ A G L RP Q + A S TQ+ + E+ +R P RG +RNS FL G +A A T + +A AIGDL+EF+DQARFAQHATVQVPDMAAALKFYV GVGMK++RTRAGP FNTTVVGFGPE L+VPP F FGVSS YGGHFTLELN QKE DG EDVD +YDPGNGVQ++QIAVD+YRIS ++KAGG+IESGYGYLQV+APGGLRL LLSG RRDPPMFLAVKVKD+ RS++WYTDVAGM + P+P AR GSPFEPEQP SVFMAYEGEAFG++L+PA +G+ +NPGS S+++LAEDV+KIAE LGG V +DS RGG +SV+V DPDGY +KFV+Y DW +LP L
Sbjct: 1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRL 409
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 259 bits (663), Expect = 8.470e-80 Identity = 154/302 (50.99%), Postives = 195/302 (64.57%), Query Frame = 3
Query: 360 ESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRA--GPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL--NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLAR-APGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGES--VNPGSAFS-LSILAEDVDKIAEDLGGTVGI---DSVRGGPRSVSVF-DPDGYLIKFVDYGDWLKEL 1229
E AIG+L E Q RF QHA V VPD+ AA++FY +G+GM+++R+RA NTT V +GPE L VP +A GVSS +YGGHF+LEL L DG +YDPGNGVQY+QIAVDTYRIS +I AGG + GYG GL++NL SG RRDP MF+A+KV DL +S++WYTDV GM+Q PYP AR A S FEP+QPK SVFM Y+ + G+LL+P + + + GSA+S L++LA DV ED G VG G SV+V DPDGY V+Y D+ +EL
Sbjct: 91 EGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDV----EDEGKRVGAMYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.060e-63 Identity = 120/259 (46.33%), Postives = 164/259 (63.32%), Query Frame = 3
Query: 333 VAGAGTVRSESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELN-LQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGES---VNPGSAFS-LSILAEDV 1094
+ GA R +A AIG+L E+ RF QH + VPDMAAAL FY+ G+ M++LR+R N+T VG+GPETL+ P G+ GVSS YG HF LELN + K +G V DPGN Y+Q+AV + R+S + +AGG I+S YG++ V +PGGLR ++ G RRDP M LA+ V D+ ++ +Y + GM + PYPL+R P S +EP+QPK S F+A+ + FGILLLP + E+ V G L+IL DV
Sbjct: 47 ITGAFPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLKTEEGDTPV---LDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDV 302
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 205 bits (521), Expect = 2.670e-59 Identity = 128/305 (41.97%), Postives = 177/305 (58.03%), Query Frame = 3
Query: 375 IGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQF--NTTVVGFGPETL---QVPPGFAFGVSSMGSYGGHFTLEL-------NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARA-PGSPFEPEQPKNSVFMAYEGEAFGILLLPA----GRGESVNPGSAFS-LSILAEDVDKIAEDLG-GTVGIDSVRGGPRSVSVF-DPDGYLIKFVDYGDWLKEL 1229
+G L E ++ R+ QHA V VP M AL FY +G+GM+++RTR P N T VG+GPETL +V GF G+SS YG HFTLEL L+ + + + V Y+PGNGVQ++QIA+ R+S + + GG I YG+++V APGGL L ++ GERRDP MF VKDL+ + +Y GM +LPY AR P SP EP+QP+ S +M Y + FG+LL+ + + GS F L+IL+ +V + L G G V G +V+ F D GY + V+Y D+ KEL
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTG--PVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 200 bits (508), Expect = 5.990e-58 Identity = 109/258 (42.25%), Postives = 153/258 (59.30%), Query Frame = 3
Query: 357 SESATAIGDLFEFRDQARFAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL-----NLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAFS-LSILAEDVDKIAED 1112
S+ +IG+L EF D A+F QH V+V DM AAL+F ++G+ M +LRTR N T VG+GPE L P F GVSS YGGHF+LEL L++ + + PG +QY+Q+A +IKAGG+I GYGY V+AP GL + + RDP ++A+KVKD+ +SI +Y V GM +L Y + R S FEP QPK SV M Y + ILL+PA R +++ G+ F+ L+I+ V+ I ++
Sbjct: 26 SQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPLEQRKPFANN------PGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGKE 277
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A7S3K077_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K077_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.340e-29 Identity = 79/222 (35.59%), Postives = 121/222 (54.50%), Query Frame = 3
Query: 414 AQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGER-RDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPG---SPFEPEQPKNSVFMAYEGEAFGILLLPAGRGESVNPGSAF 1067
A+ ++VP++A F+ + +GM+ R G Q + FGP +L+ PP F G+S+ GGHF + L E + + Y+Q A+ R S II GG+I YG + V+APG + LL G+ RD MFL+++V DL+ S+ +Y ++ G ++ PYP AR P SPF+P P+NSV++ ++FGILL+P + GSAF
Sbjct: 67 ARELRIRVPNVAVTGDFFEKALGMQ----RVGTQ----LFAFGPTSLERPPSFFPGISTFDQDGGHFAIRLEEGAESTFAQ----------SISYIQFALPNLRASKIISYGGIINEAYGVVDVLAPGNVPCRLLLGDEVRDRTMFLSLRVTDLSASLSFYQNL-GFHKAPYPRARPPTNEESPFDPNPPRNSVYLTPCDDSFGILLVPTPTPFRLALGSAF 269
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 115 bits (287), Expect = 1.270e-24 Identity = 91/285 (31.93%), Postives = 135/285 (47.37%), Query Frame = 3
Query: 411 FAQHATVQVPDMAAALKFYVQGVGMKILRTRAGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLEL--NLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEG--EAFGILLLPAGRGESVNPGSAFSLSILAEDVDKIAEDLGGTVGIDSVRG-----GPRSVSVFDP-DGYLIKFVDYGDWLKELP 1232
F QHA ++V D+ ++KF+ QG+GMK+ RTR F V FGPETL G G F LEL N +D N Q+ Q A+ ++ R++ + +GG I G+GY ++ AP G ++ + RRDP + V V D+ + K+Y V GM + G FEP + K SV M Y E GILL+P + + + +++L +DV++ E L G G VS+ P +G + FVDY D+ +E P
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRGNQAF----VSFGPETLTAADG------------GKFALELVENPSTTQD------------NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQP 409
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A2P6THP5_CHLSO (Lactoylglutathione lyase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THP5_CHLSO) HSP 1 Score: 96.3 bits (238), Expect = 6.890e-19 Identity = 96/294 (32.65%), Postives = 135/294 (45.92%), Query Frame = 3
Query: 420 HATVQVPDMAAALKFYVQGVGMKILRTRAGPQ--FNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIK-AGGVIESGYGYLQ----VVA----PGGLRLNLLS--GERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAY---EGEAFGILLLPAGRGESVNPGSAFS-LSILAEDVDKIAEDL---GGTVGIDS--VRG-GPRSVSVFDPDGYLIKFVDYGDWLKEL 1229
HA +V DM +K+Y GMK+LR R P+ ++ +G+GPE HF +EL D YD G G + IA D Y++ S +K AGG + G ++ V+A P G + L+ GE +P + ++V DL RSIK+YT+V GM L + PE F+ Y E L GR E+ G+A++ ++I +DV K AE GG V + V G G + +V DPDGY I FVD D+LKEL
Sbjct: 18 HAVYRVGDMDKTIKYYQDCFGMKLLRYRDIPEGKYSNAFLGYGPEET------------------HFAMELTYNYGVDS-------YDLGEGFGHFGIAAPDVYKLESAVKTAGGNVSRAAGPVKGGKTVIAFVDDPTGYKFELIQREGEIPEPLAQVMLRVGDLDRSIKFYTEVMGMKLL--------RTRDNPEYKYTLAFLGYGPEESSTVFELTYNYGR-ETYEKGNAYAQVAISTQDVYKTAEAAKAAGGNVVREPGPVPGIGTKITAVLDPDGYKIVFVDNEDFLKEL 277
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 97.4 bits (241), Expect = 1.410e-18 Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 3
Query: 429 VQVPDMAAALKFYVQGVGMKILRT-RAGPQ-FNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDP-----GNGVQYMQIAVDTYRISSIIKAGGVIESGYGYLQVVAPGGLRLNLLSGERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSP 953
V+VPD+AAA +F++ G+ M LR+ R GP VVG+G E L G G F+LEL +Q + D + Y+Q+ V RIS ++++GG IES YGY++V +PGGL + +++ RRDP F+A++V D+ + +Y GM ++P P R P
Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDDG------------GKFSLEL-VQASARAPAPARLALDAPDAEAAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Match: A0A2P6VRQ2_9CHLO (Lactoylglutathione lyase n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRQ2_9CHLO) HSP 1 Score: 90.9 bits (224), Expect = 7.200e-16 Identity = 88/293 (30.03%), Postives = 136/293 (46.42%), Query Frame = 3
Query: 420 HATVQVPDMAAALKFYVQGVGMKILRTR--AGPQFNTTVVGFGPETLQVPPGFAFGVSSMGSYGGHFTLELNLQKERDGGEDVDVYYDPGNGVQYMQIAV-DTYRISSIIKAGG--------VIESGYGYLQVVA-PGGLRLNLLS--GERRDPPMFLAVKVKDLTRSIKWYTDVAGMNQLPYPLARAPGSPFEPEQPKNSVFMAYEGEAFGILL-LPAGRG-ESVNPGSAFS-LSILAEDVDKIAEDL---GGTVGIDS--VRG-GPRSVSVFDPDGYLIKFVDYGDWLKEL 1229
HA +V DM +++Y + GM++LR R + +++ +G+GPET HF +EL D YD G G + IA D Y++ +KA G ++ G ++ V P G + L+ G+ +P + ++V DL RSIK+YT+V GM + + PE F+ Y E + L G ES + G+A++ ++I +DV K A+ + GG V D+ V G G + + DPDGY I FVD D+LKEL
Sbjct: 785 HAVYRVGDMDKTIQYYKECFGMQLLRYRDISEEKYSNAFLGYGPETT------------------HFAMELTYNYGVDS-------YDLGEGFGHFGIATADVYKMVEAVKAKGGKVSREPGPVKGGKTHIAFVEDPTGYKFELIQREGDIPEPLAQVMLRVGDLDRSIKFYTEVLGMKLI--------RTRENPEYKYTLAFLGYGPEESNCVFELTYNWGKESYSKGNAYAQVAISTKDVYKTAQHIKAAGGNVTRDAGPVPGIGTKITACLDPDGYKIVFVDNEDFLKEL 1044 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1199.1520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1199.1520.1 >prot_F-serratus_M_contig1199.1520.1 ID=prot_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=polypeptide|length=386bp MKVRKSQPLPWLFHRLLLLSACKTIQRTAAFGLDLRVRPVSVTPQHERVAback to top mRNA from alignment at F-serratus_M_contig1199:132724..137222- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1199.1520.1 ID=mRNA_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=mRNA|length=4499bp|location=Sequence derived from alignment at F-serratus_M_contig1199:132724..137222- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1199:132724..137222- >mRNA_F-serratus_M_contig1199.1520.1 ID=mRNA_F-serratus_M_contig1199.1520.1|Name=mRNA_F-serratus_M_contig1199.1520.1|organism=Fucus serratus male|type=CDS|length=2316bp|location=Sequence derived from alignment at F-serratus_M_contig1199:132724..137222- (Fucus serratus male)back to top |