mRNA_F-serratus_M_contig1197.1510.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1197.1510.1
Unique NamemRNA_F-serratus_M_contig1197.1510.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1197.1510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1197contigF-serratus_M_contig1197:207824..213078 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1078
Cds size1077
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1197.1510.1prot_F-serratus_M_contig1197.1510.1Fucus serratus malepolypeptideF-serratus_M_contig1197 207824..213078 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929096.639109-CDS-F-serratus_M_contig1197:207823..2079491622929096.639109-CDS-F-serratus_M_contig1197:207823..207949Fucus serratus maleCDSF-serratus_M_contig1197 207824..207949 -
1690962702.8844392-CDS-F-serratus_M_contig1197:207823..2079491690962702.8844392-CDS-F-serratus_M_contig1197:207823..207949Fucus serratus maleCDSF-serratus_M_contig1197 207824..207949 -
1622929096.6490748-CDS-F-serratus_M_contig1197:208314..2083861622929096.6490748-CDS-F-serratus_M_contig1197:208314..208386Fucus serratus maleCDSF-serratus_M_contig1197 208315..208386 -
1690962702.894705-CDS-F-serratus_M_contig1197:208314..2083861690962702.894705-CDS-F-serratus_M_contig1197:208314..208386Fucus serratus maleCDSF-serratus_M_contig1197 208315..208386 -
1622929096.6603017-CDS-F-serratus_M_contig1197:210090..2101981622929096.6603017-CDS-F-serratus_M_contig1197:210090..210198Fucus serratus maleCDSF-serratus_M_contig1197 210091..210198 -
1690962702.9046056-CDS-F-serratus_M_contig1197:210090..2101981690962702.9046056-CDS-F-serratus_M_contig1197:210090..210198Fucus serratus maleCDSF-serratus_M_contig1197 210091..210198 -
1622929096.6716852-CDS-F-serratus_M_contig1197:210812..2109411622929096.6716852-CDS-F-serratus_M_contig1197:210812..210941Fucus serratus maleCDSF-serratus_M_contig1197 210813..210941 -
1690962702.9205778-CDS-F-serratus_M_contig1197:210812..2109411690962702.9205778-CDS-F-serratus_M_contig1197:210812..210941Fucus serratus maleCDSF-serratus_M_contig1197 210813..210941 -
1622929096.6846416-CDS-F-serratus_M_contig1197:211662..2118221622929096.6846416-CDS-F-serratus_M_contig1197:211662..211822Fucus serratus maleCDSF-serratus_M_contig1197 211663..211822 -
1690962702.930129-CDS-F-serratus_M_contig1197:211662..2118221690962702.930129-CDS-F-serratus_M_contig1197:211662..211822Fucus serratus maleCDSF-serratus_M_contig1197 211663..211822 -
1622929096.698726-CDS-F-serratus_M_contig1197:212131..2122261622929096.698726-CDS-F-serratus_M_contig1197:212131..212226Fucus serratus maleCDSF-serratus_M_contig1197 212132..212226 -
1690962702.9411197-CDS-F-serratus_M_contig1197:212131..2122261690962702.9411197-CDS-F-serratus_M_contig1197:212131..212226Fucus serratus maleCDSF-serratus_M_contig1197 212132..212226 -
1622929096.7141185-CDS-F-serratus_M_contig1197:212441..2127801622929096.7141185-CDS-F-serratus_M_contig1197:212441..212780Fucus serratus maleCDSF-serratus_M_contig1197 212442..212780 -
1690962702.952721-CDS-F-serratus_M_contig1197:212441..2127801690962702.952721-CDS-F-serratus_M_contig1197:212441..212780Fucus serratus maleCDSF-serratus_M_contig1197 212442..212780 -
1622929096.7326105-CDS-F-serratus_M_contig1197:213030..2130781622929096.7326105-CDS-F-serratus_M_contig1197:213030..213078Fucus serratus maleCDSF-serratus_M_contig1197 213031..213078 -
1690962702.9679677-CDS-F-serratus_M_contig1197:213030..2130781690962702.9679677-CDS-F-serratus_M_contig1197:213030..213078Fucus serratus maleCDSF-serratus_M_contig1197 213031..213078 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1197.1510.1

>prot_F-serratus_M_contig1197.1510.1 ID=prot_F-serratus_M_contig1197.1510.1|Name=mRNA_F-serratus_M_contig1197.1510.1|organism=Fucus serratus male|type=polypeptide|length=359bp
MAVEASALCEMEHALRTLNVPLAAIACAESEIPTALARWCAAADGGDPGT
AGTAGTLAEGRVHLAIADESYHPRQLWLVERAKEVLVGVAFYTVDASCVC
PVNTFRGGRGTASMTPTAVFSREEFREAQNDVVSIALEDLTPRPRLPLNA
QLQRMVLADNGVKLPGGFQAPSDGASALSAIVLIEWAELRRLTAQHFPRF
GKPATMDASPLSREDLIAAMGGGERVGEACLRQALHTVTTSLTPSPDRAA
PVGKGGEESSIVGLVSAADGVGFDGCLLHLLRLGSLSPIRVVKALLDRAS
ELSAGTSCYAEGLQNNKGLSSLLEAVMKREYALYRAFCYYQREGRRRTVV
VGAIAPHEG
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mRNA from alignment at F-serratus_M_contig1197:207824..213078-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1197.1510.1 ID=mRNA_F-serratus_M_contig1197.1510.1|Name=mRNA_F-serratus_M_contig1197.1510.1|organism=Fucus serratus male|type=mRNA|length=5255bp|location=Sequence derived from alignment at F-serratus_M_contig1197:207824..213078- (Fucus serratus male)
ATGGCTGTGGAAGCAAGCGCGCTTTGCGAGATGGAACATGCGCTACGGGT
GAGAAACTCCCCCCCTGGTTCCCCGCCGCTTCCCAACTTTTTTGCGCTGT
TTTTGCATCTTACCTGTGCTAAAAGCCAATTATCTCACTGTCGTAGATTA
GCTGTTTGGCGAGGCTCTGGCAGAAGCGACCCCCCCACGTAAACGCAGGG
AACGTTCTGACGCGGTGTGGCCCTCGTGCAGACTCGAGCACAAGAGTAAG
TATTATACGAAAAACGCGATTTATCTTCTCATCGCGCCTCCGATTCAGAC
GCTTAATGTGCCCCTCGCGGCCATTGCCTGCGCCGAGAGCGAAATACCCA
CGGCGCTCGCGCGGTGGTGCGCCGCGGCCGACGGAGGCGATCCTGGGACG
GCGGGGACGGCAGGGACCCTTGCCGAGGGGAGAGTCCACCTGGCTATAGC
AGACGAGTCCTACCACCCCCGGCAGCTGTGGCTAGTGGAAAGGGCAAAAG
AGGTCCTCGTCGGGGTAGCCTTTTACACCGTGGACGCGTCGTGCGTATGC
CCGGTGAACACGTTCCGTGGGGGTAGGGGAACGGCTTCGATGACGCCGAC
AGCGGTGTTCTCGCGAGAAGAATTTCGCGAGGCCCAGGTGAGCAGGGCTT
ACCTCGGATCTGGGAGGCCCCATTATAGCAGGCGCGTACGCATTCGGAGC
GTTCACCAAGAGGTGCTCGTGGATAACCTGGCGTGTCACGCTGTACGATG
CTTTCTCCGGACAGCCCCCTGTAACCATTGCGTGTGTGAGGCTGGGATCA
TTGTTACGAGATATCGTAACGTTATTCCCCTTTTCACCGTGTTTTTGGAC
AGAACGACGTTGTGTCAATCGCCCTCGAAGATCTAACGCCGCGGCCGCGC
CTGCCCCTGAACGCGCAGCTCCAGCGCATGGTGCTGGCCGACAACGGGTG
AGAGGCGAACGAAGACCGCTCCCCAAGCTATTAATAATATATCCTCCTGA
TGCTACAGCCTACCGTCATAGTCCACTTGTACGGCAAGGTGTCATTTAAA
GCCGTACGTGCGAACGCGTGTGGTTATGAGCGAAGGCCTTTATAGCCTAC
CTGTTGCTCCTTCGATATCCTTTGATATTTTCTTAAGCTTATTGAGAAAT
TGATTTCTTACTGAACGCAGTTCATCTAAATATCCAATACCATGTGTGCG
CATCGTCGCTTGCAGTGCCCTATCCCAAGCCCACACACACACCCTTCCCC
GCACAGTGTCAAGCTACCTGGAGGCTTCCAAGCCCCATCTGATGGGGCAT
CGGCACTGTCTGCGATCGTGCTGATTGAATGGGCTGAACTTCGGAGGCTC
ACGGCACAACACTTCCCAAGATTCGGAAAACCCGCAACCATGGATGCATC
ACCTTTGTCAAGAGAGGTAGTATAATGTTAGGAAGTACTCCGTGTATCAT
TATATTTGGCTTCAGGCAAGGAAGGTTGTAACATCGTATTGCGAAAAATC
GTTGGGGTGAAATAATTTCATGAGCCCGAAATATTTGTTTGGGTCTCACG
ACGCACCACGTACTGTTACAAACTGCGTACAGTATACACAAAATACTATA
TAGTCCATTCTTTTTTTAACGTTTTTTCCATGTTTTTAGGTGAAGTGAAG
TCTTATCAACGTGCAAGGTTTATCATTCTCAAATGCTGCAACCTTACCCA
TCCCGCTTGTGGATCAACCCATCATATCACCTCCGTCTCCCTTTCCCCCA
TGGTCCACGCCCACGATTTTGCCACTGCTGTTGAAAGCTCAGCACTCCTG
TCATTCATAAACTTAATACGTCGTTTAATATGGTGGGTGCTCTCACGCCT
TGTTTTTGTCCGTCTCGTGATGGGACACGATCGATTTTGCTGTTCCTCCT
CTCTCTCAGCTCGTGCACCGCTCCCCCTGAGGACCTGGGTAGAGCTGTGG
GCTTCGAGCTACTTGTGTTTTAGAGCTATTACAAGTCCCACGTGACAAGA
AAATTCTACTTTATAGATGTGAAAATACAATACAGTACCTCGGTCGATCC
ACGAGTCAAAGCGACTGACTGACACACGGTATGGAAATAAGTTGTATCTT
CCATACCTCCTCTAAACGCTTGCTCTCTCCTGTGCAGGACTTGATCGCTG
CGATGGGCGGCGGGGAAAGAGTGGGAGAGGCCTGTCTGCGGCAGGCCCTT
CACACTGTCACGACCTCATTGACGCCATCACCAGACCGCGCGGCGCCAGT
AGGCAAAGGCGGCGAGGTCGGTAGCAACGACCACCCAGCATCATAACCAC
ACCTTTAATAAGCATTGAAGGCGTTGTTGTTTTTTCGTGATATATTTGTG
TGTGTGTGTGTGTGTATTTTTAAATTGCACATAACCACGCAATCCGGCCC
TGTCATGCTAAGCGCCACTCGTTGATCCTCCCGTTTCACATAACCACGCA
ATCCGGCCCTTTCCTATTTTGTCTATGCCAATTGATCCTCCCGCAATGTC
CCGCACGTTGACTTTTGTTTCCACAGTCCTCGCGTCCCGCCGTCTTTTGA
CAGCCCTCCATTTCAAGACGACGACTTTTGATGACTTATAATAAAGTGTA
TATAATGCAGTAACCCTTGGCCACTGCTCGAAAAAGGCCACGCCTTCCTT
CGGTTACGCGTGCTGCCGAGACTCACGCGCGCAGCACGCAGGGACGTAGA
TCTCCCGGTGTCTTCGAGCGCACGACATACATCCAAGGGGATAAACCATG
AATTGCCCGCACAAGAAACGCGCTCAGGACGGCGAGGGTTGCTCGGGTTG
GCTTCTCTGCTGCTTTTGATTGCCTCCGCGACCGCCTCTACGTCTCCGTA
CTTTTTGTCGATCTTTATTTTTGCAATCAGGAGTCCAGCATCGTCGGCTT
GGTTAGTGCGGCTGACGGGGTTGGATTCGACGGATGTCTCCTCCACCTGC
TGCGCCTGGGATCTCTTTCTCCCATCCGGGTCGTAAAGGTGCGCTGCTGC
AGCACATGAGCCACCGAGAGAGAGCAAAAACACATTTCGTGCTGAATCGG
CAACTTTTTTTTTTACTCCCCGAGAATGTGTCACTGCTGCAATGTCATAT
GAAAACGCCTGCCAACCCCTACCTCGGGGATGTAAAATTTATTGCCCTCT
CTCAGCTTTTTATTCACCAACGATGCAACTTTTGAACGCTTTTTGAACCA
ACAGATGTTACCACTACGCAGAAGCATGTTTCTTCCAACGATGAAGCACT
AGATTTATATACGGTTTATTACGCTAGGTTAAGGGTAAGGTTCAAGAAGC
AGACTTTGGTCGGCGTCGAAGAGAAGCAACGTGCTATCTATACGAAGTCC
ATGAAACACTTAGTTGTGGTCTTGAAGATATCTCCGATACTTTCAACATG
CCCACTTGATAACTAATAGTGGATGTGGGAAAGAGAGTCGCATATTAATT
GGTCCATGATGACCTGCCAAGGCCGCACTCGTTCGGAACTACCTTGAGGT
TTACTGGCCCTTTGCCGGCGGACTCTTGGCAGTGTACGCCATCGGTACGC
AGTGACGTGACCCGATAAACTCGGAGTGATCCGATGGGGTTTGGCATTTT
GAACAAATAAATGGACGCCGCCACGGATTCGGGAGGAATCCCGTGAGTAA
GCACCATATTCAGCCCGAGGATAGACATGAGCAGGCTGACGCGGGACGAG
ACGGCCGAACCGGTATCGCGAGACCAAATTCTCAGGCGCGAACGGGGACA
GGGAGATATTCAGTTTCCTTGTTCAGCTGACCACGACCAGGATTGGCAAC
CTTACCCGGTTGATTCTTACTTGTGCTGTATGTGATGACCATACATCAAC
TGTACCTAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATTCA
AACTATTGCTGTATGCGATGACCATATATATACAGTATAAGCGAGGTCTC
AAAAGTATCATTATTAGTATTATGCCAAAGAGTGCTCTTCAAAAAGGTAC
TCCGTTTTAAGGTTTAAGGTGTGAAAACACGGACAGTGGAAATCTCTCAG
ATTTTTCTGGCGAAAGAGTCGACAATATAATATATATTTTTGTTCGGCGC
GATAGCACTCGAATTCACTTCGTGAGCAGCAGCCCCTCTGCTCCCTGGCA
GTGGACGCTCCTACGAACCCTCCCTGGAGCTTGTATCCACGTGTAGGGCG
ACACCGCTCGACGGTAGCCTAATAATAGTGCTCTCCGTAGGTGTGCCGCC
GCCTTTTGGCGTGGTTAGCGTAGTTCTCGTTAATCTTACCCACTCGTAGG
TGACGGGCGGGCTACGGTATATCTCACCCAACACCTCTCCCTTCCCAAGT
CTCTACAAGATTGTAGTTATTAATACCACAACCCGCGACGGCGTTGTGTT
CGATTGTTTTTTCAGTATATTCACGTTCCTATGCCTGGTGTTTTCAGGGG
AGCGTGTCGTTTCCAGCGTCACGTCGTCAAGTTGTGCCATCGTGATCGAA
ATGTGTAGTTCATAAAAGTACCGCGTAAATTCCATTTTTGGCTCGTGTTC
GCAACACACGAGCGCGCCCCCCACAAACGCGTTAGTTATGTTGAAAATAC
CTTGGAAGTATGCTGGCTCTATTATAGTTCCTTGGGGAGCAGGGTTATTT
TTTTAAAGCCGCGTTCATCCCGCGATATTGTCCCTCCTGCAGGCGCTGCT
CGATCGCGCAAGCGAATTGAGTGCAGGAACGAGTTGCTACGCCGAAGGCC
TTCAAAACAACAAGGTGATGAATGATCTAAGCAATCAAGCAGTATATAGC
TTTTATAGTTGAAGCCGAAAAAGGGAGGAAAGAGCGTAGTACCTTTTCTT
CGGGGGGGGGGGGGGTTGCCAGGGGCTCCCCTCGGTGTGGATACAAAATT
GCAAAATAGAACGCCTCATCACTCAAATGAAGACATAAAATGTAAAAGCG
TTACGGTGTTAGCGTGTATATCTTGTCTGTTCATAGAGAGCTGTCGATCG
TCCACCCTCGATTAGGGTAGCGCTAATGAATAGAGTCAAGTGGCTACGGC
AATACCGCACCAAGCGCTCTTTTTTTTCTCAGCCTCACTCGCTCTGATAA
TAGTCAATGCTGGCTCCTACCGCCGCCAGGGTTTGTCAAGCCTCCTGGAG
GCCGTAATGAAGCGGGAGTACGCCCTGTACCGCGCGTTTTGCTACTACCA
GCGGGAGGGACGCCGTCGCACCGTCGTGGTCGGCGCCATCGCCCCGCACG
AGGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1197:207824..213078-

>mRNA_F-serratus_M_contig1197.1510.1 ID=mRNA_F-serratus_M_contig1197.1510.1|Name=mRNA_F-serratus_M_contig1197.1510.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig1197:207824..213078- (Fucus serratus male)
ATGGCTGTGGAAGCAAGCGCGCTTTGCGAGATGGAACATGCGCTACGGAT
GGCTGTGGAAGCAAGCGCGCTTTGCGAGATGGAACATGCGCTACGGACGC
TTAATGTGCCCCTCGCGGCCATTGCCTGCGCCGAGAGCGAAATACCCACG
GCGCTCGCGCGGTGGTGCGCCGCGGCCGACGGAGGCGATCCTGGGACGGC
GGGGACGGCAGGGACCCTTGCCGAGGGGAGAGTCCACCTGGCTATAGCAG
ACGAGTCCTACCACCCCCGGCAGCTGTGGCTAGTGGAAAGGGCAAAAGAG
GTCCTCGTCGGGGTAGCCTTTTACACCGTGGACGCGTCGTGCGTATGCCC
GGTGAACACGTTCCGTGGGGGTAGGGGAACGGCTTCGATGACGCCGACAG
CGGTGTTCTCGCGAGAAGAATTTCGCGAGGCCCAGACGCTTAATGTGCCC
CTCGCGGCCATTGCCTGCGCCGAGAGCGAAATACCCACGGCGCTCGCGCG
GTGGTGCGCCGCGGCCGACGGAGGCGATCCTGGGACGGCGGGGACGGCAG
GGACCCTTGCCGAGGGGAGAGTCCACCTGGCTATAGCAGACGAGTCCTAC
CACCCCCGGCAGCTGTGGCTAGTGGAAAGGGCAAAAGAGGTCCTCGTCGG
GGTAGCCTTTTACACCGTGGACGCGTCGTGCGTATGCCCGGTGAACACGT
TCCGTGGGGGTAGGGGAACGGCTTCGATGACGCCGACAGCGGTGTTCTCG
CGAGAAGAATTTCGCGAGGCCCAGAACGACGTTGTGTCAATCGCCCTCGA
AGATCTAACGCCGCGGCCGCGCCTGCCCCTGAACGCGCAGCTCCAGCGCA
TGGTGCTGGCCGACAACGGAACGACGTTGTGTCAATCGCCCTCGAAGATC
TAACGCCGCGGCCGCGCCTGCCCCTGAACGCGCAGCTCCAGCGCATGGTG
CTGGCCGACAACGGTGTCAAGCTACCTGGAGGCTTCCAAGCCCCATCTGA
TGGGGCATCGGCACTGTCTGCGATCGTGCTGATTGAATGGGCTGAACTTC
GGAGGCTCACGGCACAACACTTCCCAAGATTCGGAAAACCCGCAACCATG
GATGCATCACCTTTGTCAAGAGAGTGTCAAGCTACCTGGAGGCTTCCAAG
CCCCATCTGATGGGGCATCGGCACTGTCTGCGATCGTGCTGATTGAATGG
GCTGAACTTCGGAGGCTCACGGCACAACACTTCCCAAGATTCGGAAAACC
CGCAACCATGGATGCATCACCTTTGTCAAGAGAGGACTTGATCGCTGCGA
TGGGCGGCGGGGAAAGAGTGGGAGAGGCCTGTCTGCGGCAGGCCCTTCAC
ACTGTCACGACCTCATTGACGCCATCACCAGACCGCGCGGCGCCAGTAGG
CAAAGGCGGCGAGGACTTGATCGCTGCGATGGGCGGCGGGGAAAGAGTGG
GAGAGGCCTGTCTGCGGCAGGCCCTTCACACTGTCACGACCTCATTGACG
CCATCACCAGACCGCGCGGCGCCAGTAGGCAAAGGCGGCGAGGAGTCCAG
CATCGTCGGCTTGGTTAGTGCGGCTGACGGGGTTGGATTCGACGGATGTC
TCCTCCACCTGCTGCGCCTGGGATCTCTTTCTCCCATCCGGGTCGTAAAG
GAGTCCAGCATCGTCGGCTTGGTTAGTGCGGCTGACGGGGTTGGATTCGA
CGGATGTCTCCTCCACCTGCTGCGCCTGGGATCTCTTTCTCCCATCCGGG
TCGTAAAGGCGCTGCTCGATCGCGCAAGCGAATTGAGTGCAGGAACGAGT
TGCTACGCCGAAGGCCTTCAAAACAACAAGGCGCTGCTCGATCGCGCAAG
CGAATTGAGTGCAGGAACGAGTTGCTACGCCGAAGGCCTTCAAAACAACA
AGGGTTTGTCAAGCCTCCTGGAGGCCGTAATGAAGCGGGAGTACGCCCTG
TACCGCGCGTTTTGCTACTACCAGCGGGAGGGACGCCGTCGCACCGTCGT
GGTCGGCGCCATCGCCCCGCACGAGGGCGGTTTGTCAAGCCTCCTGGAGG
CCGTAATGAAGCGGGAGTACGCCCTGTACCGCGCGTTTTGCTACTACCAG
CGGGAGGGACGCCGTCGCACCGTCGTGGTCGGCGCCATCGCCCCGCACGA
GGGC
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