mRNA_F-serratus_M_contig1197.1508.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1197.1508.1 vs. uniprot
Match: D7G8F5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F5_ECTSI) HSP 1 Score: 199 bits (507), Expect = 4.420e-52 Identity = 192/545 (35.23%), Postives = 270/545 (49.54%), Query Frame = 2
Query: 29 MPKHALAPTREKP---PGVVDSSEPASSKVILSNEVLLRSKIAQLEGKHSKKDTKKP-----------------------------SATPTGXXXXXXXXXXXKSTRKGTSKRM---PEV--------------VSGCR--PGNCVGGEPRATAQPESENDILGRFEEKLAELKA-----SDAPDAEDSAAGIQEGNKRR-HRFSSKGMQALRDLYREQMRTARTMNKHADILTRKTRDLAASNQVMRTESNNCAHEAARLELAAAKLHSLSVELDERHSKVLKSRKDAAAEELKKREEMNASLNTMVSEISTTIKQQEEDRNAQDTENANLHEELQELVGGYDADAKVFSESREAQKREIVALETRLEASKDAVKQAFEVQEGLRKNLEEVVAKEDVLRRRVGEHASRLKKLEAGLKTRLESIQQMQIEEARLSISVARLSKEKITALSRLGPGIADGANG---------------DGEEGGGTGDTDSGAGEERLMALVRENRERTAELERDKERIQARCRELQMERKAISAEVEALAASAAE 1447
MPKHALAPTRE+P P V SS A+ V+LSNEVLLRSKIAQL+ + +K+ ATP+ + R TSK P+ SG + PG G R A+ ESE +++ RFE ++ + S +E+S +Q+ +++ H F+ +GMQALRD+YREQ++ ARTM K AD LTRKT+++ N+VMR E++ A EAARL AAAKL +LS ELD R + +L++R A +E +REEMNASLN +VS+IS IK+QEE+R AQD ENA+L +LQ L+ YD + +S + E V L RLE+ AV+ + +EGLRK + E ++ EA L+R G + G G D + D+ GE+ + AL+RE ++ AE ER+K+R+QARCRELQ ER I+++ E++AA+ AE
Sbjct: 1 MPKHALAPTRERPSADPSVCGSSSTATP-VVLSNEVLLRSKIAQLQLERAKQQXXXXXXXXXXXXXXXXXPLRARGQQAVEVAAAVGATPSSSADAAHGNG--RKARTATSKHRLANPQAGQSRPQNGQAAAAAASGVKGDPGGAEGRGERDAARVESEEEVMRRFEAQVILARKEGGLQSPRGSSENSGTPLQQQQQQQWHGFTPQGMQALRDMYREQVQAARTMAKQADTLTRKTQEMEKLNEVMRAEADADAREAARLNQAAAKLQTLSGELDGRRTAMLEARNVEAGKETARREEMNASLNAVVSDISKKIKEQEEERIAQDAENASLRSDLQALLQTYDENKTASEKSLRGHEEEGVKLAKRLESLTAAVQISLGREEGLRKAIGEXXXXXXXXXXXXXXXXXXXERQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLARAGCLVVGGEGGIDXXXXXXXXXXXRSDRRD-------DAKLGEDGMRALLREKKQAAAEAEREKDRLQARCRELQAERTTIASKAESVAATTAE 535
BLAST of mRNA_F-serratus_M_contig1197.1508.1 vs. uniprot
Match: A0A6H5KDN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN2_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.040e-39 Identity = 111/249 (44.58%), Postives = 155/249 (62.25%), Query Frame = 2
Query: 755 MNASLNTMVSEISTTIKQQEEDRNAQDTENANLHEELQELVGGYDADAKVFSESREAQKREIVALETRLEASKDAVKQAFEVQEGLRKNLEEVVAKEDVLRRRVGEHASRLKKLEAGLKTRLESIQQMQIEEARLSISVARLSKEKITALSRLGPGIADGANGDGEEGGGTGDTDSGA------------------GEERLMALVRENRERTAELERDKERIQARCRELQMERKAISAEVEALAASAAE 1447
MNASLN +VS+IS IK+QEE+R AQD ENA+L +LQ L+ YD + +S + E V L RLE+ A + + +EGLRK + + E VLR+RVGEHA+RL++ EAGLKT LES+Q++Q E +L +S+ARLSKEK + L+R G + GG G D GE+ + AL+RE ++ AE ER+K+R+QARCRELQ ERKAI+++V+++AA+ AE
Sbjct: 1 MNASLNAVVSDISKKIKEQEEERIAQDAENASLRSDLQALLQTYDENKAASEKSLRGHEEEGVKLAKRLESLAAAAQISLGREEGLRKAIGGLAEAEGVLRKRVGEHATRLERQEAGLKTYLESVQRLQANETKLLVSIARLSKEKTSLLARAGCLVV----------GGEGGVDXXXXXXXXXXXXXXXXXXEKLGEDGMRALLREKKQAAAEAEREKDRLQARCRELQAERKAIASKVKSVAATTAE 239 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1197.1508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1197.1508.1 >prot_F-serratus_M_contig1197.1508.1 ID=prot_F-serratus_M_contig1197.1508.1|Name=mRNA_F-serratus_M_contig1197.1508.1|organism=Fucus serratus male|type=polypeptide|length=494bp MPKHALAPTREKPPGVVDSSEPASSKVILSNEVLLRSKIAQLEGKHSKKDback to top mRNA from alignment at F-serratus_M_contig1197:172609..185282+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1197.1508.1 ID=mRNA_F-serratus_M_contig1197.1508.1|Name=mRNA_F-serratus_M_contig1197.1508.1|organism=Fucus serratus male|type=mRNA|length=12674bp|location=Sequence derived from alignment at F-serratus_M_contig1197:172609..185282+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1197:172609..185282+ >mRNA_F-serratus_M_contig1197.1508.1 ID=mRNA_F-serratus_M_contig1197.1508.1|Name=mRNA_F-serratus_M_contig1197.1508.1|organism=Fucus serratus male|type=CDS|length=2964bp|location=Sequence derived from alignment at F-serratus_M_contig1197:172609..185282+ (Fucus serratus male)back to top |