mRNA_F-serratus_M_contig1196.1496.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1196.1496.1
Unique NamemRNA_F-serratus_M_contig1196.1496.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: D7FGW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW3_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.230e-103
Identity = 206/425 (48.47%), Postives = 253/425 (59.53%), Query Frame = 1
Query:    1 KEMDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVRGLTRDKLSS------PPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEA------------GADGGEEDVAGNRA---WEDGGGRSGGQGRRNSRGLMSNRVNA---------------------EKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISLML 1149
            K+ D++W SRL+PMTRLLVAAGL+  GVR VHFVDG H++FSY +                 L     SS      P  GQTGV  LD     S FVV S EQ    +L   A    + R W  G A+ VA  I GR G   A ECVKF+  VG WGQ  RD WFPE+ D R+LL ALD+FCPI+WLRKEE             G D G+E   G  +      GG    G G R SRGL +  V                       E RK++IYQRDRDRKLLK+ EL DEL  R+ HLGW+V+EI+HDD R PC L+ +LAGAD+LLT +GFQS+LSLF+ PGS+LFE+YPHKY+ + Y P+A   G+RY YSESP LLP   +S P+ E CM+W +CR Y+R SDV +++D +E LISLML
Sbjct:   38 KDSDTSWNSRLSPMTRLLVAAGLSSVGVRDVHFVDGNHASFSYAAPSSXXXXXXXXXXXXXALRGGSSSSSEIGDSPRPGQTGVLHLDEIGYMSQFVV-STEQPLPDRLAVSAPLSPVRR-WDGGGAEDVA--IEGRGG--GARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXGKKGVDDGDEGTGGLVSPLPAGAGGDEFRGAGGRGSRGLYATVVGGPERGFAGGGRGFRAGAKKRQPEPRKLVIYQRDRDRKLLKTEELMDELWIRLGHLGWAVKEIIHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPSVEQCMKWYVCRRYMRSSDVVITEDSIEVLISLML 455          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5JCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF3_9PHAE)

HSP 1 Score: 330 bits (846), Expect = 2.820e-99
Identity = 201/426 (47.18%), Postives = 252/426 (59.15%), Query Frame = 1
Query:    1 KEMDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVR----GLTRDKLS-SPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEA-------------GADGGEEDV----------AGNRAWEDGGGRS--------------GGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISLMLD 1152
            K+ D++W SRL+PMTRLL+AAGL+  GV  VHFVDG H++FS+                      G++  ++  SP  GQTGV  LD     S FVV S EQ    +L   A    + R W  G  + VA  I GR G   A ECVKF+  VG WGQ  RD WFPE+ D R+LL ALD+FCPI+WLRKEE              G DGG+E            AG   +   GGR               G  G     G  + +   E RK++IYQRDR+RKLLK+ EL DEL  R+ HLGW+VEEIVHDD R PC L+ +LAGAD+LLT +GFQS+LSLF+ PGS+LFE+YPHKY+ + Y P+A   G+RY YSESP LLP   +S P+ E CM+W LCR Y+R SDV ++ D +E LISLML+
Sbjct:  199 KDSDTSWNSRLSPMTRLLIAAGLSSVGVHDVHFVDGNHASFSFXXXXXXXXXXXXXXXXXTALRGGISSSEIGDSPRPGQTGVLHLDEIGYMSQFVV-STEQPLPDRLAVSAPLSPVRR-WDGGGVENVA--IEGRGG--GARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXXGRRGVDGGDEGTGALVSPLPAGAGRDEFRGAGGRGSRGLYATVVAGPERGAAGGGRGFGAGAKKRQPEPRKLVIYQRDRNRKLLKTEELMDELWIRLGHLGWAVEEIVHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPSVEQCMKWYLCRRYMRSSDVVITADSIEVLISLMLE 617          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5K1S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S1_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.250e-52
Identity = 139/447 (31.10%), Postives = 201/447 (44.97%), Query Frame = 1
Query:   31 LTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKR------SERVGGGVRGLTRDKLS-------------------------------------SPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEI------------------------------GGREGTKAAGE---CVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
            L+PM+RLL+  GLT  G  +V FVD   ++FSY S D E         S +  G   G                                             P  GQ G+   D   + S FVV+ A    ++  +     + +S  +    A                                     GG++G + +     CVK++  VG      R  WFP   DA  L  A+D +CP+S+LR +E    G EE V                                 R++++YQRD++R++L + ++ ++L +R+   GW V  ++HD  R PC L++ LAG DVLLTP+GFQS+L LF+RPGS+LFE++P KYF   Y P+A    VR+ YS S +L P+ G S P+TE CM+W LCRWY R SDVE+ ++ LE L+ L
Sbjct:    4 LSPMSRLLIVVGLTSVGADNVRFVDADRASFSYTSGDPEQPAQQPRISSTQTAGADEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRPGQVGLLEFDPRGRGSEFVVSPALSLPERLTV---TADVVSPAYNPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQQGDETSAREPVCVKYLDTVGE-SVVQRSEWFPSPEDAASLRRAIDAYCPLSFLRSQE----GEEEGV---------------------------------RRLLLYQRDQNRQILHADKVVEDLQERLGG-GWIVNMMMHDSDRHPCVLVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDVRHAYSMSRALRPMMGHSYPSTETCMKWYLCRWYARSSDVELDEESLERLVDL 408          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5JWT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT6_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 5.340e-50
Identity = 137/419 (32.70%), Postives = 203/419 (48.45%), Query Frame = 1
Query:    7 MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSY---------------PSL------------DQEMKRSERVGGGVRGLTRDKLSS----PPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGEC--------VKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLR-KEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
            +D  W +  +PMTRL +AA    +G + V+FVD   + F Y               PS             D++  +++       G   ++L +    P  GQ G+       + +   ++SA    ++Q +       IS        D   G  GG E T   GEC        VK++  VG   +   + WFP   DAR    A++ FCP+ +LR  EEAGA G          WE GG   GG                  R++++YQRD+ R++  + ++ ++L +R+    W VEE++HD  R PC L+  + G DVLLTP+GFQS+L LFLRPG++LFE++PHKYF  +Y  +    GVR+ +S S S      F+ PTTE CMR+  CR Y R +DVE+ +  LE L+ L
Sbjct:  128 LDPTWMAGTSPMTRLFLAATFANAGTKKVYFVDTNRTRFGYGTSNITTGRPESPSPPSFSVQSNSASLTPADKDRNKTDVDQSAPVGAQAEELPTANGEPVPGQVGLLEFLPCGRGNEITLSSASAISERQNVSTDAGTPISN-------DDGEGLFGGGEDTDGRGECDTPREPVCVKYLNTVGR-KKVSTEHWFPSPEDARSFRTAINTFCPMPFLRGAEEAGAGGDRHRRVEGDGWEGGG--EGGV-----------------RRLLLYQRDQCRRIKNAAQVMEDLRERLGG-DWLVEEMIHDADRQPCELVKTVGGVDVLLTPHGFQSMLGLFLRPGALLFEVFPHKYFWGQYAAMVEGLGVRHAWSMSRSGRFFMRFAHPTTETCMRYKRCRAYSRNTDVEIEEQDLERLVKL 518          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: D8LD62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD62_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 4.890e-38
Identity = 122/399 (30.58%), Postives = 170/399 (42.61%), Query Frame = 1
Query:    7 MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKR------SERVGGGVR------------------------------------GLTRDKLSSPPMGQTGVFRLDGHAQRSAFVV---------------------------ASAEQKQQQQLLGDANREG---ISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGV 987
            +D  W + L+PM+RLL+  GLT  G  +V FVD   ++FSY S D E         S R  G                                       G        P  GQ G+   D   + S FV+                           A AE        G A   G   ++R    G A V +G   G E +     CVK++  VG      R  WFP   DA  L  A+D +CP+S+LR EE   +G EE V                                 R+V++YQRD++R++L + ++ ++L +R+   GW V+ ++HD  R PC L++ LAG DVLLTP+GFQS+L LF+RPGS+LFE++P KYF   Y P+A    V
Sbjct:   12 LDPTWMAHLSPMSRLLIVVGLTSVGADNVRFVDADRASFSYTSGDPEQPAQQPRISSTRTAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTAGELGDGEXXXXXXXPRPGQVGLLEFDPRGRGSEFVLSPALSLPERLTVTADVVSPAYNPPAAAAPAESGXXXXRPGAAQTGGAPPVTRAVRGGRAGVSSGGQQGEETSAREPVCVKYLDTVGE-SVVQRSEWFPSPEDAASLRRAIDAYCPLSFLRSEEG--EGEEEGV---------------------------------RRVLLYQRDQNRQILHADKVVEDLQERLGG-GWIVDMMMHDSDRHPCELVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDV 373          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A482RTA3_9ARCH (DUF563 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTA3_9ARCH)

HSP 1 Score: 101 bits (252), Expect = 2.160e-21
Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 1
Query:  676 AEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQP--TTEACMRWALCRWYVRRSDV 1104
            ++K K++IYQRD  RKLLK   +   LH R+ +  W VE ++H   R PC L    A   +LLTP+GFQS+L L + P S+LFE++P +Y+   Y P  ++ GV +    SP    L G      TT  C +  +CR   R  DV
Sbjct:    9 SKKYKLVIYQRDLSRKLLKQDNVLQMLHSRLDNSKWEVEVVMHIPDRSPCTLHPLFAQTTLLLTPHGFQSMLLLLMPPSSLLFEVFPFRYYKPAYSPFGAEMGVHHGGVMSPPTYWLYGLLMQYVTTPWCTQTKMCRVNARDQDV 153          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A7S2HI54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HI54_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.290e-21
Identity = 60/154 (38.96%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  691 VIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP---SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
            +IIYQRDRDR+L     L   L  R+    W+V  ++H +   PCGL ++L   D+LLTP+GFQSIL +F+R GS LFE++P KY+   Y P A+++G+ + +S++    S +     S  + E CM    CR Y R+ +V + D  L  ++ L
Sbjct:  135 LIIYQRDRDRRLELHEVLRKNLRKRLGKT-WNVTVVMHKENLDPCGLWEELRVTDLLLTPHGFQSILLIFMRRGSALFEVFPFKYWKIGYRPFANEYGLWHGWSQNSRATSWVKNVALSLISQERCMHSIDCRLYARQDNVYIDDSSLLKVVKL 287          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A7S0KFF8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KFF8_MICPS)

HSP 1 Score: 94.4 bits (233), Expect = 1.990e-18
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  685 RKVIIYQRDRDRKLLKSRELADELHDRM--SHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP--SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLE 1128
            R V++YQRD  R+L  + E A+ L + +      W    + H +  PPC L   L  ADVL+TP+GFQS+L + L+PG++++E++PH+Y+   Y   A ++G+ +  S SP    LP       TT  CM    CR+  R+ DV +    +E
Sbjct:    9 RHVVVYQRDAGRRLEGAEEAANALVEALPGGTGAWRHSVVTHRENLPPCLLKRCLGNADVLVTPHGFQSMLYVLLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGASLSPPRGALPTLISRAFTTRGCMSMYYCRYLARKGDVVLEARDVE 160          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: C1DZC0_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZC0_MICCC)

HSP 1 Score: 99.8 bits (247), Expect = 5.410e-18
Identity = 115/387 (29.72%), Postives = 167/387 (43.15%), Query Frame = 1
Query:   10 DSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVRGLTRDKLSSPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAG---NRAWEDGGGRSGGQGRRN-------SRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRM--SHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP--SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLE 1128
            D AW+++L PMTRLL+AA  T      V        +F+ PS  Q   R     G  RGL          G TG+    G ++ S  V  + EQ  + + +  A   G  RG     AD      GG + T  A   VK  ++ G W  T RD+        R L   +D  C        E GA            +R  E   G++  QG+             M        R V++YQRD  R+L  + E A+ L   +      W    + H +  PPC L   L  ADVL+TP+GFQS+L + L+PG++++E++PH+Y+   Y   A ++G+ +  S SP    LP       TT  CM    CR++ R+ DV +    +E
Sbjct:  145 DDAWKAQLRPMTRLLLAAAYTDGRASRV--------SFALPSSVQNHNRDGTRWG--RGLD---------GSTGL--ACGWSKTSWHV--TPEQPLRDRFVKCAGWSG--RGTSCEPADATLATDGGGDVTFGA---VK--SERGDWAPTLRDV--------RSLRDTIDRLCA-------EGGAXXXXXXXXXXXTSRRLEAKEGKADTQGKAERAVAELEGHACMGGGGVTTFRHVVVYQRDAGRRLEGAEEAANALVRALPGGTGAWRHSVVTHHENLPPCLLKRCLGNADVLVTPHGFQSMLYILLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGMSLSPPRGALPTLISRAFTTGGCMSMYYCRYFARKGDVALEARDVE 486          
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A1Y5HWQ1_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5HWQ1_OSTTA)

HSP 1 Score: 97.1 bits (240), Expect = 2.790e-17
Identity = 64/171 (37.43%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  655 LMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLG--WSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQP-----TTEACMRWALCRWYVRRSDV---EMSDDGLENLI 1137
            L  N+   +KR+ +IYQRD +RK    R       D  + LG  WSV  ++HDD  PPC L   L  A++L+TP+GFQS+L++FL   + +FE++P +Y    Y  +   FGVR+   ES    P T F +      TT+ CM   +CR+ VR++DV   E+S + L+ ++
Sbjct:  307 LTVNKNEKKKRQAVIYQRDVNRKF---RNFDQMRRDIKTVLGSDWSVSVVMHDDDNPPCLLYHCLKHAELLITPHGFQSMLTMFLPKQAYMFELFPSRYHWTGYKALGLMFGVRHVSVESH---PSTMFGRTLSAAFTTKRCMASYVCRYLVRKADVSFNELSSNILQKIV 471          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FGW3_ECTSI1.230e-10348.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCF3_9PHAE2.820e-9947.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1S1_9PHAE1.250e-5231.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT6_9PHAE5.340e-5032.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD62_ECTSI4.890e-3830.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RTA3_9ARCH2.160e-2139.31DUF563 domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S2HI54_9STRA2.290e-2138.96Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S0KFF8_MICPS1.990e-1835.53Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1DZC0_MICCC5.410e-1829.72Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A1Y5HWQ1_OSTTA2.790e-1737.43Uncharacterized protein n=1 Tax=Ostreococcus tauri... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1196contigF-serratus_M_contig1196:1496..6104 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.9
Seed ortholog evalue7.9e-91
Seed eggNOG ortholog2880.D7FGW3
Hectar predicted targeting categorysignal peptide
EggNOG OGs2C9EE@1,2SQH4@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2418
Cds size1173
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1196.1496.1prot_F-serratus_M_contig1196.1496.1Fucus serratus malepolypeptideF-serratus_M_contig1196 1502..4865 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929093.106407-UTR-F-serratus_M_contig1196:1495..15011622929093.106407-UTR-F-serratus_M_contig1196:1495..1501Fucus serratus maleUTRF-serratus_M_contig1196 1496..1501 +
1690962701.801116-UTR-F-serratus_M_contig1196:1495..15011690962701.801116-UTR-F-serratus_M_contig1196:1495..1501Fucus serratus maleUTRF-serratus_M_contig1196 1496..1501 +
1622929093.1544368-UTR-F-serratus_M_contig1196:4865..61041622929093.1544368-UTR-F-serratus_M_contig1196:4865..6104Fucus serratus maleUTRF-serratus_M_contig1196 4866..6104 +
1690962701.8433573-UTR-F-serratus_M_contig1196:4865..61041690962701.8433573-UTR-F-serratus_M_contig1196:4865..6104Fucus serratus maleUTRF-serratus_M_contig1196 4866..6104 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929093.1158948-CDS-F-serratus_M_contig1196:1501..18341622929093.1158948-CDS-F-serratus_M_contig1196:1501..1834Fucus serratus maleCDSF-serratus_M_contig1196 1502..1834 +
1690962701.8108344-CDS-F-serratus_M_contig1196:1501..18341690962701.8108344-CDS-F-serratus_M_contig1196:1501..1834Fucus serratus maleCDSF-serratus_M_contig1196 1502..1834 +
1622929093.1247377-CDS-F-serratus_M_contig1196:1906..23081622929093.1247377-CDS-F-serratus_M_contig1196:1906..2308Fucus serratus maleCDSF-serratus_M_contig1196 1907..2308 +
1690962701.8190055-CDS-F-serratus_M_contig1196:1906..23081690962701.8190055-CDS-F-serratus_M_contig1196:1906..2308Fucus serratus maleCDSF-serratus_M_contig1196 1907..2308 +
1622929093.1338232-CDS-F-serratus_M_contig1196:3738..38791622929093.1338232-CDS-F-serratus_M_contig1196:3738..3879Fucus serratus maleCDSF-serratus_M_contig1196 3739..3879 +
1690962701.8272152-CDS-F-serratus_M_contig1196:3738..38791690962701.8272152-CDS-F-serratus_M_contig1196:3738..3879Fucus serratus maleCDSF-serratus_M_contig1196 3739..3879 +
1622929093.144993-CDS-F-serratus_M_contig1196:4568..48651622929093.144993-CDS-F-serratus_M_contig1196:4568..4865Fucus serratus maleCDSF-serratus_M_contig1196 4569..4865 +
1690962701.8353379-CDS-F-serratus_M_contig1196:4568..48651690962701.8353379-CDS-F-serratus_M_contig1196:4568..4865Fucus serratus maleCDSF-serratus_M_contig1196 4569..4865 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1196.1496.1

>prot_F-serratus_M_contig1196.1496.1 ID=prot_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=polypeptide|length=391bp
MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKR
SERVGGGVRGLTRDKLSSPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQ
LLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQ
TDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAGNRAWE
DGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADEL
HDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLR
PGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEA
CMRWALCRWYVRRSDVEMSDDGLENLISLMLDDGSMRWSL*
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mRNA from alignment at F-serratus_M_contig1196:1496..6104+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1196.1496.1 ID=mRNA_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=mRNA|length=4609bp|location=Sequence derived from alignment at F-serratus_M_contig1196:1496..6104+ (Fucus serratus male)
AAGGAAATGGACTCCGCCTGGAGGTCCAGGCTAACGCCCATGACCCGGCT CCTGGTCGCTGCCGGCCTCACCAGGTCGGGCGTGAGATCGGTCCACTTCG TCGACGGCCTCCACTCAACCTTCTCCTACCCCTCCTTAGATCAAGAAATG AAACGGAGTGAAAGGGTGGGTGGAGGCGTTCGTGGCTTGACGAGGGACAA GCTCAGCAGTCCCCCGATGGGGCAGACCGGAGTCTTTCGCCTTGACGGGC ACGCCCAGCGGAGCGCTTTCGTGGTCGCTTCTGCCGAGCAAAAGCAGCAA CAGCAGTTGTTGGGCGATGCGAATAGGGAGGGGATTTCTGTGCCCGCGCT TCAAGACAATAAGAACAGTAGGAGTAAGAGTGAACAGGATGGTGGAGGCG GTTCTGGACAGCGAGGCTGGGGGGCAGGGGACGCGGACGTGGTTGCAGGA GAAATAGGAGGCAGGGAAGGAACAAAAGCGGCGGGAGAGTGCGTCAAGTT TATTGCGGACGTTGGGTCCTGGGGGCAAACGGACAGAGATTTGTGGTTCC CTGAGGACGGCGACGCGCGAGACCTGCTCTTCGCGCTCGACAATTTCTGT CCGATCTCGTGGCTCCGGAAGGAGGAAGCgGGGGCGGATGGTGGGGAGGA GGACGTGGCGGGCAATAGGGCGTGGGAGGACGGGGGGGGGAGGTCGGGCG GACAAGGGCGGCGAAACTCCAGGGGGCTCATGAGCAATCGCGTCAACGCA GAGAAGCGTAAGGTGATAATCTATCAGAGAGATCGAGACCGGAAGCTGCT CAAATCGAGAGAGGTAAGAGTGTATCGTGTGCGTTTATTGTGTGGCTTTT TTTTGTGTGACTTTTGTGTGACTTTCGCGACGACATCCAAACCACATGTG TAGTGCATTGGGGGCCCACCCCTCTTCGGGGGTCCCACCCTACTCTGCGG GTCCCTCCCCCCTATATACATTTTTTATTTATTTATTTATTTTTTGCTAT TAGGGTTAAGGTTAGGGTTATTTTACTTTTGTGTTTTTAGGGTTTGGGTT AGGGTTAGGGTTTACCTTCGGAAGGCGTTCACAGGGCGGAAATCTGGGGA CCAAACGACATACGTACGTTTTCATCCCCGAATTCCCCCATTCTATTTTT AATATATATGAGAGTGGGGCCCCCAATGCATAAAGGGCCCCCAATGCACA ACACACATGTAGGGGATGGATAGTGACTCTATCCCCTCCCCACAGTACAG AAGACGTCTACGTAGCCACCGCTGTTTGTACGTGTAATTATACCTAGATA TTTGTGACGTTCTTTCTCCCGATATTTTTCTGACATTACACTAAAGTATT GCGGGGACATGGGGTCCATGTCCCCTAGGAAGGAAGGCGATGGGGAAGAA GTTCACCCTCTCATTCGCGGTTTCTGTTTCTGTTGCAGTTGCATATATAT TTATTATAGACAGCATTGTGCCAAATACTAAACACGTGGTTGTACAATAT AAGCTACAATGACGTAGTATGTATGTTTGTATGGTCACACGTATAGCAAG AGTATGGATCAACCTGGTAAGGTTGCCAATCCTGCCCGTGGTCAGCTGAT CAGGGAAAATAATATTCCCCTGTTCGCGTTCGTGCCTGAGAATTTGGTCT CGCGAGACGGTTTCGGCAGTCCCGTCCTGCGTCAGCCTGCTCATCTCCAT ACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCCTCTCGAGTTCCGCG GCGTAGTCCATGTATGTTGGGGATCGACACTTTCTTGCTCCTGTTTCTCC TCCCCCAACCCCGATCTTCGGGTACTTATGTACCTCGTATCGAGGAGTGT TTCGTCCAGCTCTCTGTCCGAAGAGGTTGAGTACATGTACCCTAATTGTT GAGAAAAGGTATATTCAAGTAAGGCGGGAGTGTTTTCTTTCCCTTGACAG ATGAACGCCTTCACACACAGCACTGCATGCATGTGTGTAGTAGTTGAGAT CGAAAAAATAAAGCGTTTCGAAACCACTATTAAATTCGAAATATAGGATC CAAGACTGCTGCCTGTACCCTTTTGACTAGTATTCTGCTCAGCATATTCT CAAGTCTACGACCTCTGTTCTTGTAAGAAAAAAACCGGTTCGAGTTTTAT GCTTCAGCATACCTGGTACACAATATACAATATACAAAATACAATATAGC ATTAAAGAGCTCTAGGGCATCTTTGTGCGCGCTGATAACCCAGCTGGCAG ATGAACTGCACGATCGAATGTCGCACCTGGGTTGGAGCGTGGAGGAGATC GTTCACGATGATCGCCGGCCACCATGCGGGCTGATCGACCAGCTGGCCGG AGCGGACGTGCTTCTGACTCCCTACGGCTTTCAGGTACAGTACCTATGTC GGTATTTATGTCGTCGGAGGTCGGTGTTGGTGGTACTCGGGCAGCCTGAG GCTCTCTCTCTGCTTCGCCTGGCGTTACTTTGGGGGGGGGGGGGGAGGGG GTTCGCAACGCCCCGGGGATGGGTTTATATCCCCCCCCCCCCGAGGCCCG TGCCCCATTGTTCATAGAATATGATAAGTACCTACGTCGCCAGCTAGTAT TTAGTGCAAACAATGAAGGTTGTTTGTTCCGTTTTGTTCTGTTGCTCCGT TTTGTTTTCAACTGCGTCTCCTGAGATTCTCTTTTTGTTCTGGCAGTTCG GAACTGGGGGAATTTTCAACGGTTACCCAAAATGTATACCAGTACAGCAT AGGGAAGATGAATTTCTTACGCGAAAAGGAAAAACTCCACGCAAAAATCA CGAAACGATCCCCAAGCCCCCTTCACCCGTGTACTGAGAAAATAAGCGAA ACGCCACCTTATTCTGGCGTTAGCGCTCTCAAGCGCTTGAAACCATACAT GAGATTGGCATTGGTGCGATTTGTACAGAAAGGCAAAGGAAGTCCCGTGT CCCACCCAATCACACTTACTCTCTCAAGAAGAAAAGAAAACGTTTCGGAG CAAAGGCTTGACTAACCCGGTTCGCTCTTGATCCGTCGCTGCTGTTGCTG TTGCTGTTGCTTGCAACTTCCAGTCGATTCTCTCCCTGTTTCTTCGACCA GGGTCGATTCTGTTCGAGATTTACCCACACAAATACTTCGCCGAGGAATA CGGACCCGTCGCATCGAAGTTCGGCGTGAGGTACAAGTACTCCGAGAGCC CGTCGTTGCTGCCGTTGACGGGGTTTTCACAGCCCACAACGGAGGCGTGC ATGCGGTGGGCGCTGTGTCGTTGGTACGTGAGGAGGTCGGACGTGGAGAT GAGCGACGACGGGCTGGAGAATCTGATCTCTCTCATGCTAGACGACGGGA GCATGCGATGGTCCTTGTGATCCTTCAGTATTCTCCATAATATTAATAGT ACCATCGCAGGGGGGAATATTTCGCTGTCGTGTCTTAGGTGGCAGTGTAT CTATGTACAGTATACGCATTTGACACACCCTCCTAGCCCTAGAGAGTTAT TTTTGCTGCGACTACAGTGCTATGGTAGGTACTGTTAACAGGTGTGACTG TGCGCTAAAGAGGGGCAGCAGTAAACCATGAAACTTCCCCATGAGAACTT GTAAACTGCAGCGAGGTTGAGCTAGATACTCGCTGTTTTCTTTAAAGATT TTCCCCAACTGTTGTTGTAATCATGGTTGATGCCTGTCTGTGTTACAGCA GCGAAAAATAAATACTTGAAGTAAACAACTGCTAGGTTGTGTACTGTTCT ACAGTATAGTGGGCATTACAAACTGTGCTGCGGCATGCTTTCTTCAGCAT AGGGTGTATTGTATACCGTATTGCGGCATGTACCCCACCCCGTCACCCTA TGATAATAGCTCGGGGAGAAGGGAGGAGGGGTTAGGCAGGGGTGGTCAGT GCGGCGATGTGGTGTGTTTTGGTTGTCGGCTACACAAATATGGGAATATA CTGACTAGAAAAATAACACGTTGAGGGTTGAATGGCTTTTTTTACGCGAG GTTAATTTAGGAGATTAGATGACTCCGTCTTGAGATGTGTTATTTTTTCT CTTTTCTCTATGGGTGCGTGCGTGTGTGTTTCGTGGGGGATTCATCTAAT CAATGGTTAAAAACATAATGTTGTTGCAGTATAATCCATACTTGTAGTAA TAGTGTTCGTAAAAAACAAATTTATTTGTTGTTGCCTATACTGTAATAGG GGAGGGGTTTGGTGCGTGCAGCTATGACGTCGAAGTAAAATAAGGTGTCC GGCCAATGGCTTTCAGCAACACTATACAACGCGCCCTGCGACGACGAGCC ACCCATCTGGTGGCAATCTTCCACGCTGAGACCTAGGCCTAGCTATTATT AGTCCGAAGACGATCTGTGTTACAGTATAGTACCACTAGGGTGTAATGCC GGAGGTAGATGTGCAAACACACACACAACTATTTGGTTGTTGTGCTTTTG TTTGTTTGTTTTTTGTCGAAACGGAAATTATTTGGATAGAAAAACATGTT TATTTTTGTGTCTCCCTATCGATCTCTTTCATCAGGAGAGTACAAGACCA GATGACCCTTGCTACTAAAACTTATATATGCCGATATTCTATTCATTGTA ATCTCTTCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1196:1496..6104+

>mRNA_F-serratus_M_contig1196.1496.1 ID=mRNA_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=CDS|length=2346bp|location=Sequence derived from alignment at F-serratus_M_contig1196:1496..6104+ (Fucus serratus male)
ATGGACTCCGCCTGGAGGTCCAGGCTAACGCCCATGACCCGGCTCCTGGT
CGCTGCCGGCCTCACCAGGTCGGGCGTGAGATCGGTCCACTTCGTCGACG
GCCTCCACTCAACCTTCTCCTACCCCTCCTTAGATCAAGAAATGAAACGG
AGTGAAAGGGTGGGTGGAGGCGTTCGTGGCTTGACGAGGGACAAGCTCAG
CAGTCCCCCGATGGGGCAGACCGGAGTCTTTCGCCTTGACGGGCACGCCC
AGCGGAGCGCTTTCGTGGTCGCTTCTGCCGAGCAAAAGCAGCAACAGCAG
TTGTTGGGCGATGCGAATAGGGAGGGGATTTCTATGGACTCCGCCTGGAG
GTCCAGGCTAACGCCCATGACCCGGCTCCTGGTCGCTGCCGGCCTCACCA
GGTCGGGCGTGAGATCGGTCCACTTCGTCGACGGCCTCCACTCAACCTTC
TCCTACCCCTCCTTAGATCAAGAAATGAAACGGAGTGAAAGGGTGGGTGG
AGGCGTTCGTGGCTTGACGAGGGACAAGCTCAGCAGTCCCCCGATGGGGC
AGACCGGAGTCTTTCGCCTTGACGGGCACGCCCAGCGGAGCGCTTTCGTG
GTCGCTTCTGCCGAGCAAAAGCAGCAACAGCAGTTGTTGGGCGATGCGAA
TAGGGAGGGGATTTCTCGAGGCTGGGGGGCAGGGGACGCGGACGTGGTTG
CAGGAGAAATAGGAGGCAGGGAAGGAACAAAAGCGGCGGGAGAGTGCGTC
AAGTTTATTGCGGACGTTGGGTCCTGGGGGCAAACGGACAGAGATTTGTG
GTTCCCTGAGGACGGCGACGCGCGAGACCTGCTCTTCGCGCTCGACAATT
TCTGTCCGATCTCGTGGCTCCGGAAGGAGGAAGCgGGGGCGGATGGTGGG
GAGGAGGACGTGGCGGGCAATAGGGCGTGGGAGGACGGGGGGGGGAGGTC
GGGCGGACAAGGGCGGCGAAACTCCAGGGGGCTCATGAGCAATCGCGTCA
ACGCAGAGAAGCGTAAGGTGATAATCTATCAGAGAGATCGAGACCGGAAG
CTGCTCAAATCGAGAGAGCGAGGCTGGGGGGCAGGGGACGCGGACGTGGT
TGCAGGAGAAATAGGAGGCAGGGAAGGAACAAAAGCGGCGGGAGAGTGCG
TCAAGTTTATTGCGGACGTTGGGTCCTGGGGGCAAACGGACAGAGATTTG
TGGTTCCCTGAGGACGGCGACGCGCGAGACCTGCTCTTCGCGCTCGACAA
TTTCTGTCCGATCTCGTGGCTCCGGAAGGAGGAAGCgGGGGCGGATGGTG
GGGAGGAGGACGTGGCGGGCAATAGGGCGTGGGAGGACGGGGGGGGGAGG
TCGGGCGGACAAGGGCGGCGAAACTCCAGGGGGCTCATGAGCAATCGCGT
CAACGCAGAGAAGCGTAAGGTGATAATCTATCAGAGAGATCGAGACCGGA
AGCTGCTCAAATCGAGAGAGCTGGCAGATGAACTGCACGATCGAATGTCG
CACCTGGGTTGGAGCGTGGAGGAGATCGTTCACGATGATCGCCGGCCACC
ATGCGGGCTGATCGACCAGCTGGCCGGAGCGGACGTGCTTCTGACTCCCT
ACGGCTTTCAGCTGGCAGATGAACTGCACGATCGAATGTCGCACCTGGGT
TGGAGCGTGGAGGAGATCGTTCACGATGATCGCCGGCCACCATGCGGGCT
GATCGACCAGCTGGCCGGAGCGGACGTGCTTCTGACTCCCTACGGCTTTC
AGTCGATTCTCTCCCTGTTTCTTCGACCAGGGTCGATTCTGTTCGAGATT
TACCCACACAAATACTTCGCCGAGGAATACGGACCCGTCGCATCGAAGTT
CGGCGTGAGGTACAAGTACTCCGAGAGCCCGTCGTTGCTGCCGTTGACGG
GGTTTTCACAGCCCACAACGGAGGCGTGCATGCGGTGGGCGCTGTGTCGT
TGGTACGTGAGGAGGTCGGACGTGGAGATGAGCGACGACGGGCTGGAGAA
TCTGATCTCTCTCATGCTAGACGACGGGAGCATGCGATGGTCCTTGTGAT
CGATTCTCTCCCTGTTTCTTCGACCAGGGTCGATTCTGTTCGAGATTTAC
CCACACAAATACTTCGCCGAGGAATACGGACCCGTCGCATCGAAGTTCGG
CGTGAGGTACAAGTACTCCGAGAGCCCGTCGTTGCTGCCGTTGACGGGGT
TTTCACAGCCCACAACGGAGGCGTGCATGCGGTGGGCGCTGTGTCGTTGG
TACGTGAGGAGGTCGGACGTGGAGATGAGCGACGACGGGCTGGAGAATCT
GATCTCTCTCATGCTAGACGACGGGAGCATGCGATGGTCCTTGTGA
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