mRNA_F-serratus_M_contig1196.1496.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: D7FGW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW3_ECTSI) HSP 1 Score: 336 bits (862), Expect = 1.230e-103 Identity = 206/425 (48.47%), Postives = 253/425 (59.53%), Query Frame = 1
Query: 1 KEMDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVRGLTRDKLSS------PPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEA------------GADGGEEDVAGNRA---WEDGGGRSGGQGRRNSRGLMSNRVNA---------------------EKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISLML 1149
K+ D++W SRL+PMTRLLVAAGL+ GVR VHFVDG H++FSY + L SS P GQTGV LD S FVV S EQ +L A + R W G A+ VA I GR G A ECVKF+ VG WGQ RD WFPE+ D R+LL ALD+FCPI+WLRKEE G D G+E G + GG G G R SRGL + V E RK++IYQRDRDRKLLK+ EL DEL R+ HLGW+V+EI+HDD R PC L+ +LAGAD+LLT +GFQS+LSLF+ PGS+LFE+YPHKY+ + Y P+A G+RY YSESP LLP +S P+ E CM+W +CR Y+R SDV +++D +E LISLML
Sbjct: 38 KDSDTSWNSRLSPMTRLLVAAGLSSVGVRDVHFVDGNHASFSYAAPSSXXXXXXXXXXXXXALRGGSSSSSEIGDSPRPGQTGVLHLDEIGYMSQFVV-STEQPLPDRLAVSAPLSPVRR-WDGGGAEDVA--IEGRGG--GARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXGKKGVDDGDEGTGGLVSPLPAGAGGDEFRGAGGRGSRGLYATVVGGPERGFAGGGRGFRAGAKKRQPEPRKLVIYQRDRDRKLLKTEELMDELWIRLGHLGWAVKEIIHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPSVEQCMKWYVCRRYMRSSDVVITEDSIEVLISLML 455
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5JCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF3_9PHAE) HSP 1 Score: 330 bits (846), Expect = 2.820e-99 Identity = 201/426 (47.18%), Postives = 252/426 (59.15%), Query Frame = 1
Query: 1 KEMDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVR----GLTRDKLS-SPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEA-------------GADGGEEDV----------AGNRAWEDGGGRS--------------GGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISLMLD 1152
K+ D++W SRL+PMTRLL+AAGL+ GV VHFVDG H++FS+ G++ ++ SP GQTGV LD S FVV S EQ +L A + R W G + VA I GR G A ECVKF+ VG WGQ RD WFPE+ D R+LL ALD+FCPI+WLRKEE G DGG+E AG + GGR G G G + + E RK++IYQRDR+RKLLK+ EL DEL R+ HLGW+VEEIVHDD R PC L+ +LAGAD+LLT +GFQS+LSLF+ PGS+LFE+YPHKY+ + Y P+A G+RY YSESP LLP +S P+ E CM+W LCR Y+R SDV ++ D +E LISLML+
Sbjct: 199 KDSDTSWNSRLSPMTRLLIAAGLSSVGVHDVHFVDGNHASFSFXXXXXXXXXXXXXXXXXTALRGGISSSEIGDSPRPGQTGVLHLDEIGYMSQFVV-STEQPLPDRLAVSAPLSPVRR-WDGGGVENVA--IEGRGG--GARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXXGRRGVDGGDEGTGALVSPLPAGAGRDEFRGAGGRGSRGLYATVVAGPERGAAGGGRGFGAGAKKRQPEPRKLVIYQRDRNRKLLKTEELMDELWIRLGHLGWAVEEIVHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPPLLPFAFWSWPSVEQCMKWYLCRRYMRSSDVVITADSIEVLISLMLE 617
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5K1S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S1_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.250e-52 Identity = 139/447 (31.10%), Postives = 201/447 (44.97%), Query Frame = 1
Query: 31 LTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKR------SERVGGGVRGLTRDKLS-------------------------------------SPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEI------------------------------GGREGTKAAGE---CVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
L+PM+RLL+ GLT G +V FVD ++FSY S D E S + G G P GQ G+ D + S FVV+ A ++ + + +S + A GG++G + + CVK++ VG R WFP DA L A+D +CP+S+LR +E G EE V R++++YQRD++R++L + ++ ++L +R+ GW V ++HD R PC L++ LAG DVLLTP+GFQS+L LF+RPGS+LFE++P KYF Y P+A VR+ YS S +L P+ G S P+TE CM+W LCRWY R SDVE+ ++ LE L+ L
Sbjct: 4 LSPMSRLLIVVGLTSVGADNVRFVDADRASFSYTSGDPEQPAQQPRISSTQTAGADEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRPGQVGLLEFDPRGRGSEFVVSPALSLPERLTV---TADVVSPAYNPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQQGDETSAREPVCVKYLDTVGE-SVVQRSEWFPSPEDAASLRRAIDAYCPLSFLRSQE----GEEEGV---------------------------------RRLLLYQRDQNRQILHADKVVEDLQERLGG-GWIVNMMMHDSDRHPCVLVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDVRHAYSMSRALRPMMGHSYPSTETCMKWYLCRWYARSSDVELDEESLERLVDL 408
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A6H5JWT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT6_9PHAE) HSP 1 Score: 194 bits (493), Expect = 5.340e-50 Identity = 137/419 (32.70%), Postives = 203/419 (48.45%), Query Frame = 1
Query: 7 MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSY---------------PSL------------DQEMKRSERVGGGVRGLTRDKLSS----PPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGEC--------VKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLR-KEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
+D W + +PMTRL +AA +G + V+FVD + F Y PS D++ +++ G ++L + P GQ G+ + + ++SA ++Q + IS D G GG E T GEC VK++ VG + + WFP DAR A++ FCP+ +LR EEAGA G WE GG GG R++++YQRD+ R++ + ++ ++L +R+ W VEE++HD R PC L+ + G DVLLTP+GFQS+L LFLRPG++LFE++PHKYF +Y + GVR+ +S S S F+ PTTE CMR+ CR Y R +DVE+ + LE L+ L
Sbjct: 128 LDPTWMAGTSPMTRLFLAATFANAGTKKVYFVDTNRTRFGYGTSNITTGRPESPSPPSFSVQSNSASLTPADKDRNKTDVDQSAPVGAQAEELPTANGEPVPGQVGLLEFLPCGRGNEITLSSASAISERQNVSTDAGTPISN-------DDGEGLFGGGEDTDGRGECDTPREPVCVKYLNTVGR-KKVSTEHWFPSPEDARSFRTAINTFCPMPFLRGAEEAGAGGDRHRRVEGDGWEGGG--EGGV-----------------RRLLLYQRDQCRRIKNAAQVMEDLRERLGG-DWLVEEMIHDADRQPCELVKTVGGVDVLLTPHGFQSMLGLFLRPGALLFEVFPHKYFWGQYAAMVEGLGVRHAWSMSRSGRFFMRFAHPTTETCMRYKRCRAYSRNTDVEIEEQDLERLVKL 518
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: D8LD62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD62_ECTSI) HSP 1 Score: 156 bits (395), Expect = 4.890e-38 Identity = 122/399 (30.58%), Postives = 170/399 (42.61%), Query Frame = 1
Query: 7 MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKR------SERVGGGVR------------------------------------GLTRDKLSSPPMGQTGVFRLDGHAQRSAFVV---------------------------ASAEQKQQQQLLGDANREG---ISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAGNRAWEDGGGRSGGQGRRNSRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGV 987
+D W + L+PM+RLL+ GLT G +V FVD ++FSY S D E S R G G P GQ G+ D + S FV+ A AE G A G ++R G A V +G G E + CVK++ VG R WFP DA L A+D +CP+S+LR EE +G EE V R+V++YQRD++R++L + ++ ++L +R+ GW V+ ++HD R PC L++ LAG DVLLTP+GFQS+L LF+RPGS+LFE++P KYF Y P+A V
Sbjct: 12 LDPTWMAHLSPMSRLLIVVGLTSVGADNVRFVDADRASFSYTSGDPEQPAQQPRISSTRTAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQTAGELGDGEXXXXXXXPRPGQVGLLEFDPRGRGSEFVLSPALSLPERLTVTADVVSPAYNPPAAAAPAESGXXXXRPGAAQTGGAPPVTRAVRGGRAGVSSGGQQGEETSAREPVCVKYLDTVGE-SVVQRSEWFPSPEDAASLRRAIDAYCPLSFLRSEEG--EGEEEGV---------------------------------RRVLLYQRDQNRQILHADKVVEDLQERLGG-GWIVDMMMHDSDRHPCELVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDV 373
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A482RTA3_9ARCH (DUF563 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTA3_9ARCH) HSP 1 Score: 101 bits (252), Expect = 2.160e-21 Identity = 57/145 (39.31%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 676 AEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQP--TTEACMRWALCRWYVRRSDV 1104
++K K++IYQRD RKLLK + LH R+ + W VE ++H R PC L A +LLTP+GFQS+L L + P S+LFE++P +Y+ Y P ++ GV + SP L G TT C + +CR R DV
Sbjct: 9 SKKYKLVIYQRDLSRKLLKQDNVLQMLHSRLDNSKWEVEVVMHIPDRSPCTLHPLFAQTTLLLTPHGFQSMLLLLMPPSSLLFEVFPFRYYKPAYSPFGAEMGVHHGGVMSPPTYWLYGLLMQYVTTPWCTQTKMCRVNARDQDV 153
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A7S2HI54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HI54_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.290e-21 Identity = 60/154 (38.96%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 691 VIIYQRDRDRKLLKSRELADELHDRMSHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP---SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLENLISL 1143
+IIYQRDRDR+L L L R+ W+V ++H + PCGL ++L D+LLTP+GFQSIL +F+R GS LFE++P KY+ Y P A+++G+ + +S++ S + S + E CM CR Y R+ +V + D L ++ L
Sbjct: 135 LIIYQRDRDRRLELHEVLRKNLRKRLGKT-WNVTVVMHKENLDPCGLWEELRVTDLLLTPHGFQSILLIFMRRGSALFEVFPFKYWKIGYRPFANEYGLWHGWSQNSRATSWVKNVALSLISQERCMHSIDCRLYARQDNVYIDDSSLLKVVKL 287
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A7S0KFF8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KFF8_MICPS) HSP 1 Score: 94.4 bits (233), Expect = 1.990e-18 Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 685 RKVIIYQRDRDRKLLKSRELADELHDRM--SHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP--SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLE 1128
R V++YQRD R+L + E A+ L + + W + H + PPC L L ADVL+TP+GFQS+L + L+PG++++E++PH+Y+ Y A ++G+ + S SP LP TT CM CR+ R+ DV + +E
Sbjct: 9 RHVVVYQRDAGRRLEGAEEAANALVEALPGGTGAWRHSVVTHRENLPPCLLKRCLGNADVLVTPHGFQSMLYVLLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGASLSPPRGALPTLISRAFTTRGCMSMYYCRYLARKGDVVLEARDVE 160
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: C1DZC0_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZC0_MICCC) HSP 1 Score: 99.8 bits (247), Expect = 5.410e-18 Identity = 115/387 (29.72%), Postives = 167/387 (43.15%), Query Frame = 1
Query: 10 DSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRSERVGGGVRGLTRDKLSSPPMGQTGVFRLDGHAQRSAFVVASAEQKQQQQLLGDANREGISRGWGAGDADVVAGEIGGREGTKAAGECVKFIADVGSWGQTDRDLWFPEDGDARDLLFALDNFCPISWLRKEEAGADGGEEDVAG---NRAWEDGGGRSGGQGRRN-------SRGLMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRM--SHLGWSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESP--SLLPLTGFSQPTTEACMRWALCRWYVRRSDVEMSDDGLE 1128
D AW+++L PMTRLL+AA T V +F+ PS Q R G RGL G TG+ G ++ S V + EQ + + + A G RG AD GG + T A VK ++ G W T RD+ R L +D C E GA +R E G++ QG+ M R V++YQRD R+L + E A+ L + W + H + PPC L L ADVL+TP+GFQS+L + L+PG++++E++PH+Y+ Y A ++G+ + S SP LP TT CM CR++ R+ DV + +E
Sbjct: 145 DDAWKAQLRPMTRLLLAAAYTDGRASRV--------SFALPSSVQNHNRDGTRWG--RGLD---------GSTGL--ACGWSKTSWHV--TPEQPLRDRFVKCAGWSG--RGTSCEPADATLATDGGGDVTFGA---VK--SERGDWAPTLRDV--------RSLRDTIDRLCA-------EGGAXXXXXXXXXXXTSRRLEAKEGKADTQGKAERAVAELEGHACMGGGGVTTFRHVVVYQRDAGRRLEGAEEAANALVRALPGGTGAWRHSVVTHHENLPPCLLKRCLGNADVLVTPHGFQSMLYILLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGMSLSPPRGALPTLISRAFTTGGCMSMYYCRYFARKGDVALEARDVE 486
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Match: A0A1Y5HWQ1_OSTTA (Uncharacterized protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5HWQ1_OSTTA) HSP 1 Score: 97.1 bits (240), Expect = 2.790e-17 Identity = 64/171 (37.43%), Postives = 97/171 (56.73%), Query Frame = 1
Query: 655 LMSNRVNAEKRKVIIYQRDRDRKLLKSRELADELHDRMSHLG--WSVEEIVHDDRRPPCGLIDQLAGADVLLTPYGFQSILSLFLRPGSILFEIYPHKYFAEEYGPVASKFGVRYKYSESPSLLPLTGFSQP-----TTEACMRWALCRWYVRRSDV---EMSDDGLENLI 1137
L N+ +KR+ +IYQRD +RK R D + LG WSV ++HDD PPC L L A++L+TP+GFQS+L++FL + +FE++P +Y Y + FGVR+ ES P T F + TT+ CM +CR+ VR++DV E+S + L+ ++
Sbjct: 307 LTVNKNEKKKRQAVIYQRDVNRKF---RNFDQMRRDIKTVLGSDWSVSVVMHDDDNPPCLLYHCLKHAELLITPHGFQSMLTMFLPKQAYMFELFPSRYHWTGYKALGLMFGVRHVSVESH---PSTMFGRTLSAAFTTKRCMASYVCRYLVRKADVSFNELSSNILQKIV 471 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1196.1496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1196.1496.1 >prot_F-serratus_M_contig1196.1496.1 ID=prot_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=polypeptide|length=391bp MDSAWRSRLTPMTRLLVAAGLTRSGVRSVHFVDGLHSTFSYPSLDQEMKRback to top mRNA from alignment at F-serratus_M_contig1196:1496..6104+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1196.1496.1 ID=mRNA_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=mRNA|length=4609bp|location=Sequence derived from alignment at F-serratus_M_contig1196:1496..6104+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1196:1496..6104+ >mRNA_F-serratus_M_contig1196.1496.1 ID=mRNA_F-serratus_M_contig1196.1496.1|Name=mRNA_F-serratus_M_contig1196.1496.1|organism=Fucus serratus male|type=CDS|length=2346bp|location=Sequence derived from alignment at F-serratus_M_contig1196:1496..6104+ (Fucus serratus male)back to top |