mRNA_F-serratus_M_contig1189.1470.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: D7FT54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT54_ECTSI) HSP 1 Score: 182 bits (461), Expect = 8.630e-53 Identity = 89/161 (55.28%), Postives = 107/161 (66.46%), Query Frame = 1
Query: 28 DEDAVVEAVL-EACAYNTYMCCWTQND--DGVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYDQ-EYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
DED V +L E C +NTYMCCWT ND DG+ NTDVCRV D P G + E+P DSEGS YCHGFGW +G T LPLY VIN + E GYYGN+EGAP CGC+EEMPVVS++ C+ F D +T C + L +Y +R+ P G L+ NLV CDN
Sbjct: 99 DEDVHVAYLLPEMCEWNTYMCCWTGNDGPDGMTSNTDVCRVWDYPEEGNSLEFPRDSEGSVYCHGFGWADGADVNTNILPLYHSVINTGRTEEGGYYGNVEGAPQCGCLEEMPVVSFSECSRFDGDGITDCGEHGLYSNYVSRIDEPNGPLEDNLVRICDN 259
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: D7FT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT55_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.600e-50 Identity = 88/153 (57.52%), Postives = 109/153 (71.24%), Query Frame = 1
Query: 61 ACAYNTYMCCWTQND-DGVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYD-QEYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRD-----ELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
+C++NTYMCCWT+ND +G+ DNTDVCRVVD PS+G+T E+PGDSEG +CHGF W E + L L ++V N+D ++ RGYYGNIEGAP CGCIEEMPVVS A+CTT+ D + TAC NDL Y+ P G+L NLV TCDN
Sbjct: 321 SCSHNTYMCCWTENDGEGMADNTDVCRVVDYPSMGETLEFPGDSEGEVHCHGFVWPEDATDKYIHL-LSQFVQNFDHRDRRGYYGNIEGAPMCGCIEEMPVVSEADCTTYDTDPEREGKFTACTKNDLRTRYEAEY--PTGEL-ANLVDTCDN 469
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: D7G2N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N2_ECTSI) HSP 1 Score: 181 bits (460), Expect = 2.090e-50 Identity = 86/161 (53.42%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 28 DEDAVVEAVL-EACAYNTYMCCWTQNDD--GVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYDQ-EYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
DED V +L E C +NTYMCCWT +D G+ NTDVCRV+D P G E P D EG YCHGF W +G + LPLY YV N ++ + GYYGN+EG PSCGCIE+MPVVS A C+ F R+ + C +N L HYKNR+ P G+L++NLV CDN
Sbjct: 122 DEDVDVANILPETCEWNTYMCCWTGHDGSGGMYGNTDVCRVLDYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSRFGREGIEPCGANSLRSHYKNRLDEPKGELEYNLVRECDN 282
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: D7G2N0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G2N0_ECTSI) HSP 1 Score: 174 bits (441), Expect = 3.220e-49 Identity = 87/164 (53.05%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 28 DEDAVVEAVLEACAYNTYMCCWTQND-DGVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYD-QEYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRD-----ELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
D + V + C +NTYMCCWT+ND G+ DNTDVCRV+D PS+G+TTEYPG+SEG +CHGF W E + L L ++V ++D ++ RGY+GNIEGAP CGCIEEMP VS A+CTT+ + + TAC +NDL Y+ P G+LD NLVG CDN
Sbjct: 324 DNEDVPDYDFRTCNHNTYMCCWTENDGQGMADNTDVCRVIDYPSMGETTEYPGESEGEVHCHGFVWPEDATDKYIHL-LAQFVQHFDHRDRRGYFGNIEGAPMCGCIEEMPQVSEADCTTYDNEPGREGKFTACTNNDLRTRYEEEY--PMGELD-NLVGECDN 483
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: D7FT53_ECTSI (Imm downregulated 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT53_ECTSI) HSP 1 Score: 160 bits (406), Expect = 2.870e-47 Identity = 84/162 (51.85%), Postives = 101/162 (62.35%), Query Frame = 1
Query: 28 DEDAVVEAVLEA-CAYNTYMCCWTQND--DGVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYD--QEYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
DED V +L+ C ++TYMCC+T +D +GV NTDVC V PS G E PGDSEG YCHGF W EG LPLY YV N +E GYYGN+EGAP CGCIEEMP VS+A C+ FS D + C L Y R+ AP G+++ NLV +CDN
Sbjct: 25 DEDLEVAKLLDGTCEWDTYMCCYTNHDSGEGVTANTDVCSV---PSEG--LEMPGDSEGPVYCHGFAWPEGADVNNHILPLYHYVKNIGRTEEEGGYYGNVEGAPECGCIEEMPQVSFAECSRFSIDGIGECGEGGLYSQYNGRLDAPYGEMEHNLVRSCDN 181
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: A0A6H5JT81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT81_9PHAE) HSP 1 Score: 163 bits (413), Expect = 3.170e-47 Identity = 74/150 (49.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query: 58 EACAYNTYMCCWTQNDD--GVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYDQ-EYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
E C +NTYMCCWT +D G+ N DVCRV++ P G E P D EG YCHGF W +G + LPLY YV N ++ + GYYGN+EG PSCGCIE+MPVVS A C+ F + + C N L YK ++ P G++++NLV CDN
Sbjct: 12 ETCEWNTYMCCWTGHDGSKGMYGNADVCRVLNYPEEGDVLELPRDDEGPVYCHGFAWADGADIDSHILPLYHYVTNVNRTDDGGYYGNVEGVPSCGCIEDMPVVSDAACSKFGGEGIEPCWDNSLRSQYKYKLDEPKGEMEYNLVRECDN 161
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: A0A6H5L9G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9G6_9PHAE) HSP 1 Score: 145 bits (366), Expect = 3.080e-41 Identity = 74/162 (45.68%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 28 DEDAVVEAVLE-ACAYNTYMCCWTQND--DGVEDNTDVCRVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYD--QEYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDFNLVGTCDN 498
DED V +L+ C ++TYMCC+T +D +GV NTDVC V +EGS YCHGF W +G LPLY YV N +E GYYG++EGAP CGCIEEMP VS+A C+ F D + C L Y R+ AP G+++ NLV +CDN
Sbjct: 32 DEDLEVAKLLDDTCEWDTYMCCFTNHDSGEGVTANTDVCSVP--------------NEGSVYCHGFAWPDGADVNNHILPLYHYVKNIGRTEEEGGYYGSVEGAPECGCIEEMPQVSFAECSRFDIDGIVGCGEGGLYSQYNGRLGAPYGEMEHNLVRSCDN 179
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: A0A7S1VY93_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VY93_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.420e-18 Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 1
Query: 55 LEACAYNTYMCCWTQN-------------------DDGVEDNTDVCRVVDS--PSVGQTTE----YPGDSEGSTYCHGFGWEEG---EAFLTVQLPLYEYVINYDQ-EYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDELTACQSNDLSKHYKNRMAAPGGDLDF 474
E C N MCCW Q+ D DNTD+C V S P+ +T++ + G+ EG ++CHGF W++ E+ L L+ YV YD + RGY N+ GAP CGC+E+M VV+ A+CT S E ND +N ++A DL+
Sbjct: 109 FEGCTLNAAMCCWVQDRQAGDNNGNCATPYDENCVDADPADNTDICYVDMSRAPASSRTSDGFSLFEGEEEGDSHCHGFAWDKDPSDESALFKGNNLF-YVSFYDHLQQRGYVRNVPGAPMCGCVEQMAVVTRADCTEISTSETVEFSFND-----QNDLSATISDLEL 271
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: A0A7S2IBC4_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IBC4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.700e-16 Identity = 58/190 (30.53%), Postives = 85/190 (44.74%), Query Frame = 1
Query: 64 CAYNTYMCCWT---QNDDG-------------VEDNTDVC-----------RVVDSPSVGQTTEYPGDSEGSTYCHGFGWEEGE-AFLTVQLPLYEYVINYDQEYRGYYGNIEGAPSCGCIEEMPVVSYANCTTFSRDE---------------------LTACQSNDLSKHYKNRMAAPGGDLDFNLVG 486
CA + MCC+ Q DG EDN+D+C RV + ++ ++ DSEG+ YCHGF W+E + + L+E + + +GY N+ GAP CGCIE+MPVVS + C++ S E C DL+ H+ N++ GGDL +VG
Sbjct: 177 CAVDAVMCCYVSDRQAGDGGGTCAGPGCFFAEPEDNSDICYMDMSNAPKSARVANGVAIYDKKDHETDSEGNAYCHGFAWKEADYSSKYAGNLLFEVAMKQNLYDKGYVQNVPGAPMCGCIEKMPVVSKSACSSLSATEEWTFSATGSALAVDFETVQINYDNCGGADLADHF-NQLT--GGDLSSYIVG 363
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Match: A0A7S2I1I6_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1I6_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 7.690e-16 Identity = 46/131 (35.11%), Postives = 63/131 (48.09%), Query Frame = 1
Query: 49 AVLEACAYNTYMCCWTQN---------------DDGVEDNTDVCRV--VDSPSVGQTTE----YPGDSEGSTYCHGFGWEEGEAFLTVQLPLYEYVINYDQEYRGYYGNIEGAPSCGCIEEMPVVSYANCT 378
A + C + MCCWT + D DNTDVC V +SP T + +PGD+EG +C GF W+E + + V+ GY N+ GAP CGC+E+MPVVS+A C+
Sbjct: 142 ANFQECHHRAAMCCWTADKYNVGGGSCTSAGCADGDPLDNTDVCHVDMKNSPLAAHTRDGVAVFPGDAEGPVHCQGFAWDEKDEMFRGNALFH--VVMKGLLSNGYTRNVPGAPMCGCVEQMPVVSHAVCS 270 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1189.1470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1189.1470.1 >prot_F-serratus_M_contig1189.1470.1 ID=prot_F-serratus_M_contig1189.1470.1|Name=mRNA_F-serratus_M_contig1189.1470.1|organism=Fucus serratus male|type=polypeptide|length=166bp MERSTSDSDDEDAVVEAVLEACAYNTYMCCWTQNDDGVEDNTDVCRVVDSback to top mRNA from alignment at F-serratus_M_contig1189:37230..38413- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1189.1470.1 ID=mRNA_F-serratus_M_contig1189.1470.1|Name=mRNA_F-serratus_M_contig1189.1470.1|organism=Fucus serratus male|type=mRNA|length=1184bp|location=Sequence derived from alignment at F-serratus_M_contig1189:37230..38413- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1189:37230..38413- >mRNA_F-serratus_M_contig1189.1470.1 ID=mRNA_F-serratus_M_contig1189.1470.1|Name=mRNA_F-serratus_M_contig1189.1470.1|organism=Fucus serratus male|type=CDS|length=996bp|location=Sequence derived from alignment at F-serratus_M_contig1189:37230..38413- (Fucus serratus male)back to top |