mRNA_F-serratus_M_contig1183.1465.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5L7G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G9_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.260e-24 Identity = 68/183 (37.16%), Postives = 96/183 (52.46%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLE-FGAFDNPNGYTTASPLPRTTCEPYGMRVSRSGTLR----DWIRSCPGWRERLFQREPSWHG 558
F YKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH KGF A A+ +RQ+H + ++KY + V + +T+ G R A T E FG+FD+ Y A P + S+ L DW + + RL QR W G
Sbjct: 151 FRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLV---NTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVPSEHYLRDVRRFYFSKLPVLEVDSVDW--TLEEYHHRLMQR---WDG 325
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE) HSP 1 Score: 108 bits (271), Expect = 4.230e-24 Identity = 69/186 (37.10%), Postives = 98/186 (52.69%), Query Frame = 1
Query: 22 LTCFVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAP-AKDTLEFGAFDNPNGYTTASPLPRTTCEPYGMRVSRSGTLR----DWIRSCPGWRERLFQREPSWHG 558
+T F YKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH KGF A A+ +RQ+H + ++KY + V +T+ G R A AK FG+FD+ Y A P + + S+ L DW + + RL QR W G
Sbjct: 8 VTGFRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLVSTR---RTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVRRLYFSKLPVLEVDSVDW--TLEEYHHRLMQR---WDG 185
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5KDX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX0_9PHAE) HSP 1 Score: 107 bits (267), Expect = 5.340e-24 Identity = 66/183 (36.07%), Postives = 98/183 (53.55%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLE-FGAFDNPNGYTTASPLPRTTCEPYGMRVSRSGTLR----DWIRSCPGWRERLFQREPSWHG 558
F YKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH K F A A+ +RQ+H + ++KY + V + +T+ G R A +T E FG+FD+ Y A P + + + + L DW + ++ RL QR W G
Sbjct: 117 FRYKCAKCAEFNKGKQEAEKHKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVNRLADDLVHGKDFSAAAKNIRQAHTTKFMVDQLKYTSLV---NTRRTSSGIFRSANLANTPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFPKLPVLEVDSVDW--TLEEYQHRLMQR---WDG 291
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5KJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA7_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.310e-23 Identity = 64/182 (35.16%), Postives = 97/182 (53.30%), Query Frame = 1
Query: 34 VYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLE-FGAFDNPNGYTTASPLPRTTCEPYGMRVSRSGTLR----DWIRSCPGWRERLFQREPSWHG 558
VYKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ ++ + D LVH KGF A + +RQ+H + ++KY + V + +T+ G R A T E FG+FD+ + A P + + + S+ L DW + ++ RL QR W G
Sbjct: 11 VYKCAKCAEFNKGKQRAEKCKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMLDRLADGLVHGKGFSAGTKNIRQAHTTKFMVDQLKYTSLV---NTRRTSSGIFRSANLAKTPERFGSFDDSTKHGGAVPSEHYLRDVWRLYFSKLPVLEVDSVDW--TLEEYQHRLMQR---WDG 184
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5JPP4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP4_9PHAE) HSP 1 Score: 103 bits (258), Expect = 1.010e-22 Identity = 66/183 (36.07%), Postives = 96/183 (52.46%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAP-AKDTLEFGAFDNPNGYTTASPLPRTTCEPYGMRVSRSGTLR----DWIRSCPGWRERLFQREPSWHG 558
F YKC CA+ N GK + E+ +F W AG L +LP ++ + FPFLLTKRS I++ +V + DDLVH KGF A A+ + Q+H + ++KY + V +T+ G R A AK FG+FD+ Y A P + + + S+ L DW + ++ RL QR W G
Sbjct: 151 FRYKCAKCAEFNKGKQEAEKRKTSFNAWGAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNICQAHTTKFMVDQLKYTSLVSTR---RTSSGIFRSANLAKIPERFGSFDDSTKYGGAVPSEHYLRDVWRLYFSKLPVLEMDSVDW--TLEEYQHRLMQR---WDG 325
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5KGK6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK6_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.020e-22 Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLE-FGAFDNPNGYTTASPL 435
F YKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH KG A A+ +RQ+H + +KY + V + +T+ G R A T E FG+FD+ + T P+
Sbjct: 11 FRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGLSAAAKNIRQAHTTKFMVDHLKYTSLV---NTRRTSSGIFRSANLAKTPERFGSFDD--FFNTLGPV 143
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5KT01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT01_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.600e-21 Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLE-FGAFDNPNGYTTASP 432
F YKC A+ N GK + E WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH KGF A A+ +RQ+H + ++KY + V + +T+ G R A T E FG+FD+ Y A P
Sbjct: 30 FRYKCAKGAEFNKGKQEAETRKTRVNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICMVDRLADDLVHGKGFSAAAKNIRQAHTTKFMVDQLKYTSLV---NTRRTSSGIFRSANLAKTPERFGSFDDSTKYGGAVP 163
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: D7FSB0_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSB0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.040e-19 Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADG--REAPAKDTLEFGAFDNPNGYTTASP 432
F YKC CA+ N GK + + +F WDAG L +LP ++ + FPFLLTKRS I++ +V + DDLVH K F A A+ + Q+H + ++K + V + +T+ G R A T E FD+ Y A P
Sbjct: 3 FRYKCAKCAEFNKGKQEVGKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEIRMVDRLADDLVHGKDFSAAAKNICQAHTTKFMVDQLKCTSLV---NSRRTSSGIFRSANLAKTPERFGFDDSTKYGGAVP 135
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5JXN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN0_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 3.740e-18 Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 31 FVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMK--YLNQVLWNDFYKTAD 354
F YKC CA+ N GK + E+ +F WDAG L +LP ++ + FPFLLTKRS I++ V + D LVH KGF A+ +RQ+H + ++K + +L+ +K D
Sbjct: 215 FRYKCAKCAEFNKGKQEAEKRKTSFNAWDAGCLRRLPEYISKEFPFLLTKRSGIEICKVDRLTDHLVHGKGFSGAAKDIRQAHTTKFMVDQLKDAVASALLYEVIHKNKD 324
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 4.990e-18 Identity = 53/138 (38.41%), Postives = 84/138 (60.87%), Query Frame = 1
Query: 115 DAGVLEQLPLFLQESFPFLLTKRSAIDVVIVREMRDDLVHSKGFKATAEALRQSHLQAYYQSRMKYLNQVLWNDFYKTADGREAPAKDTLEFGAFDNPNGYTTASP----LPRTTCEPYGMRVSRSGTLRDWIRSCPG 516
++ VL LPL++QESFPF LT++SAI +V E+ D+L+H+KGF A++EAL+Q+HL ++ +KY + +LW + + +A +D EFG+F++ +GY SP L CE M+ SR+ L + G
Sbjct: 6 NSDVLALLPLYVQESFPFFLTRKSAIHRDVVAEVADNLMHAKGFSASSEALQQAHLYRFHSMELKYYSMLLW----RREEQLDAGVED--EFGSFEDADGYNGFSPSEHYLSTVWCE--RMQQSRAARLDKHVNGVQG 135 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1183.1465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1183.1465.1 >prot_F-serratus_M_contig1183.1465.1 ID=prot_F-serratus_M_contig1183.1465.1|Name=mRNA_F-serratus_M_contig1183.1465.1|organism=Fucus serratus male|type=polypeptide|length=195bp LRDGSCDLTCFVYKCTVCAKSNAGKPKDERASETFRGWDAGVLEQLPLFLback to top mRNA from alignment at F-serratus_M_contig1183:172171..173172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1183.1465.1 ID=mRNA_F-serratus_M_contig1183.1465.1|Name=mRNA_F-serratus_M_contig1183.1465.1|organism=Fucus serratus male|type=mRNA|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig1183:172171..173172- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1183:172171..173172- >mRNA_F-serratus_M_contig1183.1465.1 ID=mRNA_F-serratus_M_contig1183.1465.1|Name=mRNA_F-serratus_M_contig1183.1465.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig1183:172171..173172- (Fucus serratus male)back to top |