mRNA_F-serratus_M_contig1178.1433.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 176 bits (445), Expect = 5.390e-51 Identity = 92/211 (43.60%), Postives = 134/211 (63.51%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE +G++MW AT TR +IA A RAVAR+C + H +A + IL Y+V T GIT+G G L ME + D+D + RRSVSG +M +G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KH DV+H+ + + +++S+ YV S QHAD TK L F
Sbjct: 72 FRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKALHFGDF 282
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 173 bits (438), Expect = 4.740e-50 Identity = 91/211 (43.13%), Postives = 137/211 (64.93%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G +SW SR Q+ T++AEYV+L++V+KEV+FL+QV+ F+ P + + V EDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHAD TK L+ F
Sbjct: 33 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKALNAGDF 243
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 177 bits (448), Expect = 6.120e-50 Identity = 94/211 (44.55%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHAD TK L F
Sbjct: 217 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 427
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.910e-49 Identity = 89/211 (42.18%), Postives = 135/211 (63.98%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV FM P + + VFEDN+G++++A N + +KHID +H+++R + +++S+ +V SE QHAD TK + + F
Sbjct: 72 FRELVGSVMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYVRKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITNSNSKHIDERHHLIRKLVERKEISITHVTSEFQHADFLTKAISKESF 282
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.320e-49 Identity = 88/211 (41.71%), Postives = 135/211 (63.98%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D + RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV FM P + + VFEDN+G++++A N + +KHIDV+H+ +R+ + +++S+ V + QHAD TK + + F
Sbjct: 100 FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESF 310
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE) HSP 1 Score: 173 bits (438), Expect = 4.630e-49 Identity = 87/211 (41.23%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D + RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV FM P + + VFEDN+G++++ N + +KHIDV+H+ +R+ + +++S+ +V ++ QHAD TK + + F
Sbjct: 155 FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESF 365
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 171 bits (434), Expect = 5.610e-49 Identity = 94/207 (45.41%), Postives = 134/207 (64.73%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARK-VSVAYVRSEDQHADLFTKPL 615
+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ KHIDV+H+ +R+ RK +S+ +V S QHAD T+ L
Sbjct: 116 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.240e-48 Identity = 94/211 (44.55%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE +G++MW AT TR DIA AVRAVAR+C + H +A + IL Y+V T GIT+ G L ME + D+D + RRSVSG ++M G ISW SR Q+ T++AEYV+L++V+KEV+FL+QV FM P + + VFEDN+G+++LA N ++ +KHIDV+H+ +R+ +++S+ +V S QHAD TK L F
Sbjct: 391 FRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDF 601
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5L3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 2.740e-48 Identity = 89/211 (42.18%), Postives = 135/211 (63.98%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYG-GQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE VG++MW AT TR DIA AVRAVAR+C + H KA + IL Y+ T GIT+ G + M+ + D+D + RSVSG ++M G ++W SR Q+ T++AEYVA ++V+KEV+FL+QV FM P + + VFEDN+G++++A N + +KHIDV+H+ +R+ + +++S+ +V SE QHAD TK + + F
Sbjct: 192 FRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKGADCRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAFADVLKEVLFLRQVWRFMLPDTGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESF 402
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Match: A0A6H5K2P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P8_9PHAE) HSP 1 Score: 169 bits (428), Expect = 4.420e-48 Identity = 87/211 (41.23%), Postives = 132/211 (62.56%), Query Frame = 1
Query: 1 YREAVGAIMWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITY-GGQGCELCMEAYTDSDLGACLDTRRSVSGAVLMLAKGAISWHSRMQEETASGTSDAEYVALSEVIKEVIFLKQVQEFMEPSMRIC*VNVFEDNEGSVKLATNKYASCRTKHIDVKHYVVRDAFDARKVSVAYVRSEDQHADLFTKPLDMQKF 630
+RE VG++MW AT TR DIA A RAVAR+C + H KA + IL Y+ T GIT+ GG + M+ + D+D + RRSVSG ++M G ++W SR Q+ T++AEYVA+++V+KEV+FL+QV F+ P + + VFEDN+G+++ A N + KHIDV H+ +R+ + + +++ +V ++ QHAD TK Q F
Sbjct: 107 FRELVGSLMWLATQTRPDIADAARAVARYCPSPKMVHWKAALGILGYVRRTSWMGITFEGGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCVWGGVTWFSRTQKSVTLSTTEAEYVAIADVLKEVLFLRQVWRFILPDASMPCIPVFEDNQGAIQNAHNPIINSNLKHIDVMHHFIRELVERKDITITHVPTQVQHADFLTKASSKQSF 317 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1178.1433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1178.1433.1 >prot_F-serratus_M_contig1178.1433.1 ID=prot_F-serratus_M_contig1178.1433.1|Name=mRNA_F-serratus_M_contig1178.1433.1|organism=Fucus serratus male|type=polypeptide|length=136bp MWTATMTRRDIACAVRAVARFCENTGPAHKKAVMKILQYLVHTKGWGITYback to top mRNA from alignment at F-serratus_M_contig1178:102820..103455- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1178.1433.1 ID=mRNA_F-serratus_M_contig1178.1433.1|Name=mRNA_F-serratus_M_contig1178.1433.1|organism=Fucus serratus male|type=mRNA|length=636bp|location=Sequence derived from alignment at F-serratus_M_contig1178:102820..103455- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1178:102820..103455- >mRNA_F-serratus_M_contig1178.1433.1 ID=mRNA_F-serratus_M_contig1178.1433.1|Name=mRNA_F-serratus_M_contig1178.1433.1|organism=Fucus serratus male|type=CDS|length=816bp|location=Sequence derived from alignment at F-serratus_M_contig1178:102820..103455- (Fucus serratus male)back to top |