mRNA_F-serratus_M_contig1176.1422.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1176.1422.1
Unique NamemRNA_F-serratus_M_contig1176.1422.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: D8LJD7_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJD7_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 4.730e-68
Identity = 138/222 (62.16%), Postives = 154/222 (69.37%), Query Frame = 1 
Query:    1 RLFEGMVERKSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVPAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKHPQQVGPTDITAASGKPEEEKSESPSQLRIFVQ 666
            RL EG++ RKSFYFQQRTGKLD+RAIGRVDI  VVK+VD++TLQ HLENITFA V EDDLRLYSD+CFLNLFRLSQLLLEYLL+VQDTLA SLE                           RALKR IRQKR TI+RYEQLLA+PAP P G      V  G   GL SCL CGK FTTAEFLQQHI RKH +  G +  T      +EEK+  P+QLR+FVQ
Sbjct:   33 RLVEGILRRKSFYFQQRTGKLDMRAIGRVDIASVVKDVDVDTLQAHLENITFASVSEDDLRLYSDQCFLNLFRLSQLLLEYLLSVQDTLATSLE--------------------------DRALKREIRQKRATIARYEQLLALPAP-PSGRD----VPGGNGGGLHSCLTCGKMFTTAEFLQQHIARKHARHAGSSADTKVD---QEEKTAYPTQLRLFVQ 220
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A024UCD6_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCD6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.470e-30
Identity = 80/185 (43.24%), Postives = 113/185 (61.08%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAV----PAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKH 570
            +SF F+QR GKLD RAI ++D++RVV+E DI+T+Q  LEN+ F+D+   D   YSD  FL LF+++QL +EYLLNVQ++L V  E L S+   ++ E      E +S   + R LK+ I+QK+ TIS YE +L        P  +G+TL  T  SG  E    C+ C K F + E+L +H   KH
Sbjct:   82 RSFSFRQRRGKLDTRAIAQIDLNRVVRETDIDTIQNQLENLAFSDITLQDFNQYSDEYFLKLFQIAQLTVEYLLNVQESLVVHAEELESQCDQIQHECAVLAEENESVDAELRHLKQEIKQKQNTISTYELMLLTRQHQTMPPSQGSTLPTTSPSGPVE----CILCNKRFLSTEYLLKHQRNKH 262
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A2R5FYZ7_9STRA (Zinc finger protein DZIP1L n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYZ7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.260e-28
Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1 
Query:   10 EGMVERKSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVPAPRPRGNTLSAT 471
            E +   K+FYFQQR GKLDLR I R+D+++VV++VDIETLQ +LEN+TF+++ + DL   +D  FL LFR++QL +EYLLNVQ TL      L  + A + KE D ++++L   SE+ ++L+R ++QKR T+  YE LL     R  G+   A+
Sbjct:   59 ENVRPEKNFYFQQRHGKLDLRGIARLDLEQVVEDVDIETLQTYLENLTFSELEDRDLHTCTDETFLKLFRVTQLTIEYLLNVQHTLYAYTSTLEGQLAHIHKEQDLAQSKLGMQSEQLQSLQRELKQKRRTLKTYEFLLTQREARQPGSISHAS 212
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: W4FDC5_9STRA (C2H2-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDC5_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.120e-27
Identity = 75/187 (40.11%), Postives = 111/187 (59.36%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLL------AVPAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKH 570
            +SF F+QR GKLD RAI ++D++RVV+E DI+T+Q  LEN+ F+D+   D   YSD  FL LF+++QL +EYLLNVQ++L +  E L S+   ++ +      E +S   + R LK+ I+QK+ TIS YE +L      A P P P    L  +    ++     C+ C K F + E+L +H   KH
Sbjct:   78 RSFSFRQRRGKLDTRAIAQIDLNRVVRETDIDTIQNQLENLAFSDITLQDFNQYSDEYFLKLFQIAQLTVEYLLNVQESLVMHTEELESQCEQVQHDCAALADENESVDAELRLLKQEIKQKQNTISTYELMLLTRQHQAPPVPPPSQGHLPPSTLPPVE-----CILCNKKFLSTEYLIKHQRHKH 259
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A485LAG3_9STRA (Aste57867_18047 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAG3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.270e-26
Identity = 75/198 (37.88%), Postives = 111/198 (56.06%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVP----APRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKHPQQVGPTDITAAS 609
            +SF F+QR GK+D RAI ++D++RVV+E DI+T+Q  LEN+ F+DV   D   YSD  FL LF+++QL +EYLL+VQ++L    + L  +   +R E      E      +   LK+ I+QK+ TIS YE +L        P PR  +    VS  L      C+ C K F + E+L +H  +KH ++   T  +  S
Sbjct:   63 RSFSFRQRRGKIDSRAIAQIDLNRVVRETDIDTIQCQLENLAFSDVTLQDFNQYSDEYFLKLFQVAQLTVEYLLSVQESLVAHSQDLERQCGEVRTECKMLADENDKIDSEVCLLKQDIKQKQNTISTYEMMLLTQQYKSTPPPRSTSPDTPVSPAL------CILCNKKFLSTEYLLKHQKKKHVEEAMHTQESKTS 254
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A7S2S367_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S367_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.720e-26
Identity = 66/143 (46.15%), Postives = 99/143 (69.23%), Query Frame = 1 
Query:   16 MVERKSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVPAPR 444
            +V +KSFYFQQR GK+DLRAI RVD++ +V++VDIETLQ HLENITF+++ + D++ Y+D  F+ LFRL+QL +EYLLNVQ TL      L  +   ++ E   ++ ++   +E+  +L+R ++QK+ T+  YE LL     R
Sbjct:   87 IVPQKSFYFQQRHGKIDLRAISRVDLEALVEQVDIETLQTHLENITFSELDDADMKTYTDDNFMKLFRLTQLTVEYLLNVQHTLYSYATTLERQAQGIQNEQVVAEQKMDMQNEQLTSLRRELKQKKRTLKTYEFLLTQKGAR 229
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A7S3HAZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAZ7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.920e-25
Identity = 58/138 (42.03%), Postives = 93/138 (67.39%), Query Frame = 1 
Query:   13 GMVERKSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLL 426
            G+   + F+FQQR G LDLR+I  ++++++V+EVD++ LQ+H+ENITF ++ E+DLR  +D   + LFR+SQL+LEYLL  QD L  +L  L+ KY+  ++ + K + EL    E T+ L+  ++ K+  I+  E LL
Sbjct:   55 GLFGSEGFFFQQRRGHLDLRSIAAINLEKLVREVDVDVLQIHIENITFCNLREEDLRYLTDPQIVKLFRISQLMLEYLLYSQDKLVDNLNHLSHKYSEKKRGLSKKRRELVELEESTKLLRNQVKAKKQNIATLEDLL 192
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A1V9YBD5_9STRA (C2H2-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBD5_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.670e-25
Identity = 74/188 (39.36%), Postives = 113/188 (60.11%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEAL-------ASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVPAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKH 570
            + F F+QR GKLD R I ++D+++VV+E DI+T+Q HLEN+ F+DV   D+  YSD  FL LF+++QL +EYLLNVQ++L +  E L       AS+  +L +E  K  AE+         LK+ I+QK+ TI+ +E +L     +  G T  A  ++ +D     C+ C K F + E+L +H  +KH
Sbjct:   77 RPFSFRQRQGKLDTRTIAQIDLNKVVRETDIDTIQNHLENLAFSDVTLQDVNQYSDEYFLKLFQVAQLTVEYLLNVQESLVLHTEDLETQCDRVASECKTLEEENGKFDAEIA-------LLKQEIKQKQNTIATFEMMLLSQQAKAPGQT-PAPANAPVD-----CVFCNKKFLSTEYLLKHQKKKH 251
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A397D502_9STRA (C2H2-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D502_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.240e-25
Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLL------AVPAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKH 570
            +SF F+QR GKLD RAI ++D++RVV+E DI+T+Q  LEN+ F+D+   D   YSD  FL LF+++Q    YLLNVQ++L +  E L S+   ++ +      E +S   + R LK+ I+QK+ TIS YE +L      A P P P    L  +    ++     C+ C K F + E+L +H   KH
Sbjct:   31 RSFSFRQRRGKLDTRAIAQIDLNRVVRETDIDTIQNQLENLAFSDITLQDFNQYSDEYFLKLFQIAQ----YLLNVQESLVMHTEELESQCEQVQHDCAALADENESVDAELRLLKQEIKQKQNTISTYELMLLTRQHQAPPVPPPSQGHLPPSTLPPVE-----CILCNKKFLSTEYLIKHQRHKH 208
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BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Match: A0A397E0Z7_9STRA (C2H2-type domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E0Z7_9STRA)

HSP 1 Score: 114 bits (285), Expect = 7.150e-25
Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 1 
Query:   28 KSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADVVEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRKEVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLL------AVPAPRPRGNTLSATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKH 570
            +SF F+QR GKLD RAI ++D++RVV+E DI+T+Q  LEN+ F+D+   D   YSD  FL LF+++Q    YLLNVQ++L +  E L S+   ++ +      E +S   + R LK+ I+QK+ TIS YE +L      A P P P    L  +    ++     C+ C K F + E+L +H   KH
Sbjct:  473 RSFSFRQRRGKLDTRAIAQIDLNRVVRETDIDTIQNQLENLAFSDITLQDFNQYSDEYFLKLFQIAQ----YLLNVQESLVMHAEELESQCEQVQHDCAALADENESVDAELRLLKQEIKQKQNTISTYELMLLTRQHQAPPVPPPSQGHLPPSTLPPVE-----CILCNKKFLSTEYLIKHQRHKH 650
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1176.1422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJD7_ECTSI4.730e-6862.16C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A024UCD6_9STRA2.470e-3043.24C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A2R5FYZ7_9STRA4.260e-2846.10Zinc finger protein DZIP1L n=1 Tax=Hondaea ferment... [more]
W4FDC5_9STRA1.120e-2740.11C2H2-type domain-containing protein n=3 Tax=Aphano... [more]
A0A485LAG3_9STRA1.270e-2637.88Aste57867_18047 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2S367_9STRA5.720e-2646.15Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3HAZ7_9STRA2.920e-2542.03Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1V9YBD5_9STRA3.670e-2539.36C2H2-type domain-containing protein n=1 Tax=Achlya... [more]
A0A397D502_9STRA6.240e-2539.04C2H2-type domain-containing protein n=2 Tax=Aphano... [more]
A0A397E0Z7_9STRA7.150e-2539.04C2H2-type domain-containing protein n=5 Tax=Aphano... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1176contigF-serratus_M_contig1176:53696..57524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.0
Seed ortholog evalue5.2e-57
Seed eggNOG ortholog2880.D8LJD7
Preferred nameDZIP1
KEGG koko:K16470
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0000902,GO:0000904,GO:0001568,GO:0001578,GO:0001944,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003143,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006355,GO:0006357,GO:0006606,GO:0006607,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007276,GO:0007281,GO:0007368,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007507,GO:0008104,GO:0008150,GO:0008589,GO:0009605,GO:0009653,GO:0009790,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010638,GO:0010646,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019222,GO:0019953,GO:0021536,GO:0021983,GO:0021984,GO:0022008,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030510,GO:0030900,GO:0031175,GO:0031290,GO:0031323,GO:0031326,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034451,GO:0034504,GO:0034613,GO:0035050,GO:0035082,GO:0035239,GO:0035270,GO:0035295,GO:0036064,GO:0040011,GO:0042221,GO:0042330,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0044085,GO:0044087,GO:0044089,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045185,GO:0045724,GO:0045995,GO:0046907,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051098,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051220,GO:0051234,GO:0051235,GO:0051239,GO:0051252,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060271,GO:0060322,GO:0060429,GO:0060491,GO:0060562,GO:0061371,GO:0061512,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0080090,GO:0090092,GO:0090287,GO:0097485,GO:0097539,GO:0097730,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:1902017,GO:1902115,GO:1902117,GO:1903506,GO:1905330,GO:2000026,GO:2000027,GO:2000112,GO:2000223,GO:2000826,GO:2001141
EggNOG free text desc.Zinc finger protein
EggNOG OGs28IYV@1,2QRAI@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons7
Model size828
Cds size813
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1176.1422.1prot_F-serratus_M_contig1176.1422.1Fucus serratus malepolypeptideF-serratus_M_contig1176 53711..57524 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929077.3195622-UTR-F-serratus_M_contig1176:53695..537101622929077.3195622-UTR-F-serratus_M_contig1176:53695..53710Fucus serratus maleUTRF-serratus_M_contig1176 53696..53710 +
1690962695.1422205-UTR-F-serratus_M_contig1176:53695..537101690962695.1422205-UTR-F-serratus_M_contig1176:53695..53710Fucus serratus maleUTRF-serratus_M_contig1176 53696..53710 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929077.329782-CDS-F-serratus_M_contig1176:53710..538271622929077.329782-CDS-F-serratus_M_contig1176:53710..53827Fucus serratus maleCDSF-serratus_M_contig1176 53711..53827 +
1690962695.1538854-CDS-F-serratus_M_contig1176:53710..538271690962695.1538854-CDS-F-serratus_M_contig1176:53710..53827Fucus serratus maleCDSF-serratus_M_contig1176 53711..53827 +
1622929077.340125-CDS-F-serratus_M_contig1176:54126..542761622929077.340125-CDS-F-serratus_M_contig1176:54126..54276Fucus serratus maleCDSF-serratus_M_contig1176 54127..54276 +
1690962695.171843-CDS-F-serratus_M_contig1176:54126..542761690962695.171843-CDS-F-serratus_M_contig1176:54126..54276Fucus serratus maleCDSF-serratus_M_contig1176 54127..54276 +
1622929077.3534775-CDS-F-serratus_M_contig1176:56015..560931622929077.3534775-CDS-F-serratus_M_contig1176:56015..56093Fucus serratus maleCDSF-serratus_M_contig1176 56016..56093 +
1690962695.1822078-CDS-F-serratus_M_contig1176:56015..560931690962695.1822078-CDS-F-serratus_M_contig1176:56015..56093Fucus serratus maleCDSF-serratus_M_contig1176 56016..56093 +
1622929077.3632658-CDS-F-serratus_M_contig1176:56294..563441622929077.3632658-CDS-F-serratus_M_contig1176:56294..56344Fucus serratus maleCDSF-serratus_M_contig1176 56295..56344 +
1690962695.1907995-CDS-F-serratus_M_contig1176:56294..563441690962695.1907995-CDS-F-serratus_M_contig1176:56294..56344Fucus serratus maleCDSF-serratus_M_contig1176 56295..56344 +
1622929077.3760507-CDS-F-serratus_M_contig1176:56601..567991622929077.3760507-CDS-F-serratus_M_contig1176:56601..56799Fucus serratus maleCDSF-serratus_M_contig1176 56602..56799 +
1690962695.1992068-CDS-F-serratus_M_contig1176:56601..567991690962695.1992068-CDS-F-serratus_M_contig1176:56601..56799Fucus serratus maleCDSF-serratus_M_contig1176 56602..56799 +
1622929077.3857718-CDS-F-serratus_M_contig1176:57142..572001622929077.3857718-CDS-F-serratus_M_contig1176:57142..57200Fucus serratus maleCDSF-serratus_M_contig1176 57143..57200 +
1690962695.2072945-CDS-F-serratus_M_contig1176:57142..572001690962695.2072945-CDS-F-serratus_M_contig1176:57142..57200Fucus serratus maleCDSF-serratus_M_contig1176 57143..57200 +
1622929077.3981085-CDS-F-serratus_M_contig1176:57362..575241622929077.3981085-CDS-F-serratus_M_contig1176:57362..57524Fucus serratus maleCDSF-serratus_M_contig1176 57363..57524 +
1690962695.21529-CDS-F-serratus_M_contig1176:57362..575241690962695.21529-CDS-F-serratus_M_contig1176:57362..57524Fucus serratus maleCDSF-serratus_M_contig1176 57363..57524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1176.1422.1

>prot_F-serratus_M_contig1176.1422.1 ID=prot_F-serratus_M_contig1176.1422.1|Name=mRNA_F-serratus_M_contig1176.1422.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MVERKSFYFQQRTGKLDLRAIGRVDIDRVVKEVDIETLQVHLENITFADV
VEDDLRLYSDRCFLNLFRLSQLLLEYLLNVQDTLAVSLEALASKYASLRK
EVDKSKAELQSASEKTRALKRAIRQKRVTISRYEQLLAVPAPRPRGNTLS
ATVSSGLDEGLCSCLACGKTFTTAEFLQQHIVRKHPQQVGPTDITAASGK
PEEEKSESPSQLRIFVQLNTGQCLNMMVNGGATVAQLRGYIDSAAGFTVA
GPSTRLIYRRGINMMVKEVK*
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mRNA from alignment at F-serratus_M_contig1176:53696..57524+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1176.1422.1 ID=mRNA_F-serratus_M_contig1176.1422.1|Name=mRNA_F-serratus_M_contig1176.1422.1|organism=Fucus serratus male|type=mRNA|length=3829bp|location=Sequence derived from alignment at F-serratus_M_contig1176:53696..57524+ (Fucus serratus male)
AGGCTGTTTGAAGGCATGGTGGAGCGCAAGTCATTCTACTTCCAGCAAAG
GACCGGGAAGTTGGACTTGAGGGCCATCGGTCGGGTTGACATAGACAGAG
TGGTGAAGGAAGTTGACATCGAGACCTTGCAGGTAGGTGGGATGTTTTCG
AGGGACGAGAGAACGCGTGCGCCATAGAAAACAGCACGAGCGGTAAGATT
GCCATCCCTGAGACCACTGGAGGAGTGGTGTCTCCATCTGCTGCGTCGCT
ATCTCTAGCCATCATCGTGTTTTGAACAATACGGCTTTCCCCAATTTCCC
GCTCTATCGCTCGAATCGTTTGACCGTGAAAAACACATACTATCCAAGTA
GTTCTACTTTCGGCAGCGTTATTCCAAAAAAGTTCAATCGTCGTTGTTGC
TATTTTGTTGCTGTGGATGATGGCTTAACAGGTTCACCTGGAGAACATTA
CCTTCGCCGATGTCGTTGAAGACGATTTGAGACTTTATTCCGATCGATGC
TTCCTTAACCTTTTTCGACTAAGTCAGTTGCTCCTTGAATACTTGCTCAA
TGTCCAAGATACACTTGCTGTCAGCCTTGAGGTAAGCAACGGTTCGCAAC
GTATTGATTCCCTTTTTGAGGCTGAGGCTCGCAAAGTTGAAGCGGTGAAG
TTTGACGAGATCTAGAACCTTCATACAGAGAGAGGGACAGAAAAAGAGAA
AGAAGGAGAAATATCATCTACCTGGTAGAGAATAGAATAGCAAGGAAGCA
AGGAGGGAAGCGCAAGGCACTCAGGCCTTAACGAAGAACTGTAAAAGTAT
ATAGAATGTGCACCATTTGTCGCGCCTGATAAGATTTTTTCGTAATAAGT
ATCATTGATCCCCCTTGGGAGGATCAATGATGCGAGTGACAAAAAATGAC
TAGAGTGCACAGGGCCGGATTGCGCGCTTATGCGCAGTTTAATAAATACA
CACACGCACACGCACATCGTCGTAATAAGTATGATTGATCCCCCTCGGGA
GGATCTCAATGCAAGGGGCACACAATGACTAGGATGACAGGGCCGGATTA
CGCGCTTATATGCAGTTTAACAAATACACACACGCACACGCACAAACACA
CACAAACACACTTTCGTAATAGGTTCCGTTGATCCCTTAATAACCCTTGG
GAGGATCTCACTGCAAGTGGCATATAATGACTAGGATGGCAGGGCCGGAT
TGCGCGGTTATGTGCAATTTAATAAATACACACTCACTCAGGCACACACA
CACACACACACACACACACACACACAAACACACACACCCCCCTTTGTCGC
GTCTGATCAGAGGTTTTCGTAATAAGTATCATTGATcCCCCCTCGGGAGG
ATCAATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGCG
GTTATGTGCAATTTAATAAATACACACACACACGCACACACACACACACA
GCACAAGGTACTCTGGGCTTAAAGTAAGAATTGTACAAGTAGAGAGAGTG
AGTCCCCTTTGTCGCGTCTGATCAGAGGTTTTCGTAATAAGTATCATTGA
TCCCCCCTCGAGAGGATCAATACAAGTGGCATAAAATGACTAGGATGACA
GGGTCGGATTGCGCGGTTATGTGCAAATTAGTAAACACACACAAGGATCA
ATGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGCGGTTA
TGTGCAATTCAATAAACACACACACACACACACACACTCCCCTTTGTCGC
GTCTGATCAGAGGTTCTCGTTATAAGTATCATTGATCCCCCCTCGGGAGG
ATCAATGCAAGTGGCATATAATGACTAGGATGACAGGGCCGGATTGCGTG
GTTATGTGCAATTTAATAAATACACACACACACACACACACACACACACA
CACTCAGTAGCTTAGACTGATGAGCACGACAGCGCCGGACTGCGCGGTTA
TGTGCAATTTAATAACCACACAATGGTCGATACATTTCGACGTCAACGGT
ACCTGAAAGCCGTTCGTTTTGAGATGAAATATTACGCGGGACAGAAAGGC
ACAGCTCGTGGGACCACCCTTTACTCGGCTTTTATTAATATTTTCCTAGC
CGAGGCGTTTGGCTTTCGATGGCCTGCTACCCTTGCCTCCTGAACATATA
GAATATGTTGCTCATCATGTGAACGAAGGAAGAGGTTCTTAAGCGAGTTA
TATGTTGTGCCCGACTCTCGGGAAGGGTTTCCCCCGCCCCGCGAAGGTCG
CATTGGGAATACCTCTTATTCCCCTCATTTTCCGAAACATCAATTGACTC
CCTGCTGCCCCGGGTGTCAGGCGTTGGCGTCGAAGTATGCTTCACTCCGA
AAAGAGGTTGATAAGAGCAAGGCAGAGCTTCAGTCGGCATCGGAAAAGGT
GCACCCACGATCTCTCCGCGGAATGAAAGATAACGTTATGCCGATTTGAA
TGTCTTTGGCCATGAGTAGATCGCCACGGTCCACGAACGTTTCGAACGTC
GTTTGCTTGGTTTGGTTCTGCGGGCGTCGCAATTATCACACACTCGACGG
CTGTCAAGCAGCTAACCAATGGACTCTCCACTGCTTTGGCACCCAACAGA
CCCGCGCGTTGAAGAGAGCAATACGACAGAAAAGAGTAACAATCTCGCGG
TGAGTTGAGGACTAAGCCTATAGCTAATGCCTCGGCGTACTGTTGTTCGG
GATAAGGTGCAACAGTTTCCACACACGACTCCGTCTCGTCGAGGTCAAAT
GCGTTCGCTGGTGTATCCTCCCGACCATGTTAGTGTTCTGACTCTATACC
TGACTACGCGTGGATCTGTGACAGGAAACAGCTGCCACGTCACCCAGCAT
AATTGGTTCGTGAACATAACTTGGCCAATTTCCCGCATGCTTCTACTCAA
AATCAGATACGAGCAGCTGCTGGCCGTGCCTGCTCCACGCCCCCGAGGTA
ACACACTTTCAGCGACAGTCAGCAGTGGCTTAGATGAGGGACTGTGCTCA
TGCCTCGCATGCGGCAAGACGTTCACTACGGCCGAGTTCTTGCAGCAGCA
TATCGTCAGGAAGCACCCGCAGCAGGTCGGGCCCACAGACATCACCGCAG
CCAGGTGAGACAGGGGAGATAAGCAATGTGCAACTGCTCCGGTGGCATAT
TATGTACCTCAACACGAAACGTTTTATTCTCGCTTTATCTGACATACGAC
GCTGCATTCGATACCTCTACCACGGGACTCGCGAGGAAAGACAGATTGTG
TGTAGCAGCTTTCTCTTACACGCAGACCATAGATATATGTATCGCCCCTT
TTCCCATGGGCAGACGTCTCACATGTTCCAAAGTAATCACATCAATTGAG
GAGTTACGTTTTGAACTAACAAGCTTGTCCCTCATTTTTTCGCCGCATTT
TCGGTGAAGTCGTAATCATATTGAAAAGAGGGCAGGGACAAGGACAGCGG
TAAGCCCGAGGAGGAGAAATCCGAGTCTCCCTCACAGCTGCGGATTTTTG
TGCAGGTGAAAGCCCCGGTACATGTGCCCTAAAACGCTCTGTTCGATGTG
TACGAGTGAGGGAACGTGTTGATCGGTTTGATATCACCGCGTTACATTTA
TCACGGCATTCGCGCTGCCATTTTTTTTGTTTTCAACAAGTTCGCCCCCC
CTTCCTGTTCTGTTTAGTTGAACACGGGGCAGTGCCTGAACATGATGGTG
AATGGAGGGGCGACAGTGGCGCAGCTGCGCGGGTACATCGATTCCGCCGC
GGGATTCACGGTCGCGGGGCCATCAACACGCCTCATTTACAGGCGAGGGA
TAAATATGATGGTGAAAGAAGTGAAATAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1176:53696..57524+

>mRNA_F-serratus_M_contig1176.1422.1 ID=mRNA_F-serratus_M_contig1176.1422.1|Name=mRNA_F-serratus_M_contig1176.1422.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig1176:53696..57524+ (Fucus serratus male)
ATGGTGGAGCGCAAGTCATTCTACTTCCAGCAAAGGACCGGGAAGTTGGA
CTTGAGGGCCATCGGTCGGGTTGACATAGACAGAGTGGTGAAGGAAGTTG
ACATCGAGACCTTGCAGATGGTGGAGCGCAAGTCATTCTACTTCCAGCAA
AGGACCGGGAAGTTGGACTTGAGGGCCATCGGTCGGGTTGACATAGACAG
AGTGGTGAAGGAAGTTGACATCGAGACCTTGCAGGTTCACCTGGAGAACA
TTACCTTCGCCGATGTCGTTGAAGACGATTTGAGACTTTATTCCGATCGA
TGCTTCCTTAACCTTTTTCGACTAAGTCAGTTGCTCCTTGAATACTTGCT
CAATGTCCAAGATACACTTGCTGTCAGCCTTGAGGTTCACCTGGAGAACA
TTACCTTCGCCGATGTCGTTGAAGACGATTTGAGACTTTATTCCGATCGA
TGCTTCCTTAACCTTTTTCGACTAAGTCAGTTGCTCCTTGAATACTTGCT
CAATGTCCAAGATACACTTGCTGTCAGCCTTGAGGCGTTGGCGTCGAAGT
ATGCTTCACTCCGAAAAGAGGTTGATAAGAGCAAGGCAGAGCTTCAGTCG
GCATCGGAAAAGGCGTTGGCGTCGAAGTATGCTTCACTCCGAAAAGAGGT
TGATAAGAGCAAGGCAGAGCTTCAGTCGGCATCGGAAAAGACCCGCGCGT
TGAAGAGAGCAATACGACAGAAAAGAGTAACAATCTCGCGACCCGCGCGT
TGAAGAGAGCAATACGACAGAAAAGAGTAACAATCTCGCGATACGAGCAG
CTGCTGGCCGTGCCTGCTCCACGCCCCCGAGGTAACACACTTTCAGCGAC
AGTCAGCAGTGGCTTAGATGAGGGACTGTGCTCATGCCTCGCATGCGGCA
AGACGTTCACTACGGCCGAGTTCTTGCAGCAGCATATCGTCAGGAAGCAC
CCGCAGCAGGTCGGGCCCACAGACATCACCGCAGCCAGATACGAGCAGCT
GCTGGCCGTGCCTGCTCCACGCCCCCGAGGTAACACACTTTCAGCGACAG
TCAGCAGTGGCTTAGATGAGGGACTGTGCTCATGCCTCGCATGCGGCAAG
ACGTTCACTACGGCCGAGTTCTTGCAGCAGCATATCGTCAGGAAGCACCC
GCAGCAGGTCGGGCCCACAGACATCACCGCAGCCAGCGGTAAGCCCGAGG
AGGAGAAATCCGAGTCTCCCTCACAGCTGCGGATTTTTGTGCAGCGGTAA
GCCCGAGGAGGAGAAATCCGAGTCTCCCTCACAGCTGCGGATTTTTGTGC
AGTTGAACACGGGGCAGTGCCTGAACATGATGGTGAATGGAGGGGCGACA
GTGGCGCAGCTGCGCGGGTACATCGATTCCGCCGCGGGATTCACGGTCGC
GGGGCCATCAACACGCCTCATTTACAGGCGAGGGATAAATATGATGGTGA
AAGAAGTGAAATAATTGAACACGGGGCAGTGCCTGAACATGATGGTGAAT
GGAGGGGCGACAGTGGCGCAGCTGCGCGGGTACATCGATTCCGCCGCGGG
ATTCACGGTCGCGGGGCCATCAACACGCCTCATTTACAGGCGAGGGATAA
ATATGATGGTGAAAGAAGTGAAATAA
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