mRNA_F-serratus_M_contig1170.1412.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: D7FR86_ECTSI (Autophagy protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR86_ECTSI) HSP 1 Score: 418 bits (1075), Expect = 2.750e-138 Identity = 233/393 (59.29%), Postives = 268/393 (68.19%), Query Frame = 2
Query: 26 MEGLFREVQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQRNLWLEDTASGEPLRWHIPTGVLFDLI--VGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSLRWRASRGTARERAPITEGDGRD-------PATSDVTQDRSSAELGTPLREEGGHRGKAGDLGAAAGSDGAGEGEEPLERV---------AVKGPGSDVEAM-LPLVLVQGVEVPLDAPVAQLWGALRHPDHFMYVVVRKR 1144
M+ L ++V+ EAW GMIP ELSMDSSE+TSLQRPLPLYLLLPRM FLPCV + +SHHFGEV PDAQR LWLE+T SGEPLRWH+PTGVLFDLI VG EEG G PWS + LLPW+ITVHFQGCP+RQVFPLEKE IRRHY NALKQAL+LQ GSS AGMTLAKENQ RLW A+++ND KVF E+D+L G G +R+VPVR+L GGAPPSQLPIP +RP+G FTLRDCL W CP + W A G E P+++ + P D + R SAE GT + G AA G E E RV AV D AM LP+VLVQGVEVPLDAP+ QLWGALRHPDHF+Y+VVRK+
Sbjct: 141 MDALLQDVRQEAWGGMIPTELSMDSSEVTSLQRPLPLYLLLPRMGFLPCVAEAISHHFGEVAPDAQRTLWLEETRSGEPLRWHVPTGVLFDLIAGVGQEEGGGAKHGEEV-PWSG-----PGRLGLLPWRITVHFQGCPRRQVFPLEKEADIRRHYTNALKQALFLQSGSSRAGMTLAKENQNRLWQAIKSNDTKVFHEMDALLGGDRGTVRLVPVRLLTGGAPPSQLPIPAQRPDGTPFTLRDCLRWFCPGVPWDAEEGA--EEVPLSQQQQQQAGIAAAQPGKGDFGR-RDSAEEGTVNTVD--------TQGNAAERSGVEERLETDTRVIGGQQAGMLAVSS--DDAGAMSLPVVLVQGVEVPLDAPITQLWGALRHPDHFLYIVVRKQ 514
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 415 bits (1066), Expect = 9.510e-132 Identity = 230/395 (58.23%), Postives = 266/395 (67.34%), Query Frame = 2
Query: 26 MEGLFREVQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQRNLWLEDTASGEPLRWHIPTGVLFDLI--VGSEEGDGHDGARPPRPWSDEVEGEAVKR-SLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSLRWRASRGTARERAPIT---------EGDGRDPATSDVTQDRSSAELGTPLREEGGHRGKAGDLGAAAGSDGAGEGEEPLERV---------AVKGPGSDVEAMLPLVLVQGVEVPLDAPVAQLWGALRHPDHFMYVVVRKR 1144
M+ L +V+ EAW GMIP ELSMDSSE+TSLQRPLPLYLLLPRM FLPCV + +SHHFGEV PDAQR LWLE+T SGEPLRWHIPTGVLFDLI VG EEG G + V R LLPW+ITVHFQGCP+RQVFPLEKE IRRHY NALKQAL+LQ GSS AGMTLAKENQ RLW A+++ND K+F E+D+L G G +R+VPVR+L GGAPPSQLPIP +RP+G FTLRDCL W CP + W G E AP++ E P D+ + S+AE GT + G AA G E E RV AV G G+ + LP VLVQGVEVPLDAP+ Q+WGALRHPDHF+Y+VVRK+
Sbjct: 560 MDALLEDVRQEAWKGMIPTELSMDSSEVTSLQRPLPLYLLLPRMGFLPCVAEAISHHFGEVAPDAQRTLWLEETRSGEPLRWHIPTGVLFDLIAGVGQEEGGSAAGVVGGAKHGEAVPWSGPGRLGLLPWRITVHFQGCPRRQVFPLEKEADIRRHYTNALKQALFLQSGSSRAGMTLAKENQNRLWQAIKSNDTKMFHEMDALLGGDRGTVRLVPVRLLTGGAPPSQLPIPAQRPDGTPFTLRDCLCWLCPGVPWDGEEGA--EEAPVSRRXXXXXXAETAAAQPGKGDLRRRDSTAE-GTVNTVD--------TQGNAAERSGVEEKLETDTRVIAGQQAGVLAVSGGGAGAMS-LPTVLVQGVEVPLDAPITQVWGALRHPDHFLYIVVRKQ 942
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: A0A836CF32_9STRA (Autophagy protein 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF32_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.790e-51 Identity = 149/431 (34.57%), Postives = 194/431 (45.01%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQRNLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKR-----------------------SLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFR--EIDSLFGKGAGLRV--VPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL---------------------------RWRASRGTARERAPITEGDGRD---PATSDVTQDRSSA-----------ELGTPLREEGGHRGKAGDLGAAAGSDGAGEGEEPLERVAVKGPGSDVEAMLPLVLVQGVEVPLDAPVAQLWGALRHPDHFMYVVV 1135
V+ W G+IPAELSMD E+TSL P PLY+LLPRM++LPC T+ V HFG+ +A+R LW EDT +G+PLRWH+P GVL DL G + LPW++TVHF P +QV P E + +RRH+ NA+KQALYLQ S+ GM LAK Q +W A++ D F E + L G G G V VPVRV + A Q+PI G LRD + P L R+ AR R +T R AT + DRS ++ P +GG D + DG+G+ ERV ++G V+A PL LD PVA++W LRHPD F+YVV+
Sbjct: 7 VRGSLWAGLIPAELSMDQKEVTSLYAPQPLYILLPRMSYLPCHTEEVVAHFGDAAAEARRALWFEDTLTGQPLRWHLPIGVLHDLRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAALPWRLTVHFHRFPHKQVVPFEDDAAVRRHFTNAMKQALYLQHASARVGMGLAKAAQLGMWGALKAGDGAAFAAAEGEELGGGGEGEAVQRVPVRVCLP-ARTIQMPILANLNGGAPAMLRDSVQLSQPLLCRDYNCMRQSQPVSQPCVTRARCRRRCRYPRRSMAARRRRCVTACGSRSLRVAATMIASNDRSQRLKHMPHAPPPPQMPIPATLDGGAPTTLRDSVRLSCRDGSGDALS-CERVTIQG----VDAT-PL---------LDEPVARVWRLLRHPDRFVYVVL 421
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: H3GF06_PHYRM (Autophagy protein 5 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GF06_PHYRM) HSP 1 Score: 151 bits (382), Expect = 2.360e-38 Identity = 87/252 (34.52%), Postives = 132/252 (52.38%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQR----NLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-----LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL 775
+Q W G IP S+D++E+T+L P P Y ++PRM+FL T V +F + P ++W E A G PL WH+P G+L DL+ G GHDG LPW +TVHF G P + P + E+ + H+M++LKQA +L++GS+ A M L + QT++W ++ ND + +RE G LR +P+R+ + AP Q+PI P + +G TL + L++ P L
Sbjct: 8 LQQRVWGGRIPVVFSLDANEVTTLHAPRPFYAMVPRMSFLVSQTRDVVEYFRDAAPPMSAMQGASIWFE--AKGVPLHWHLPFGLLRDLLC----GPGHDGDAD-----------------LPWHLTVHFLGFPSDVLLPCDNEQSVESHFMHSLKQATFLRVGSTKAVMALPEAQQTQIWTSLSQNDFESYREATRKLHLDGGVDASALRHLPLRLHLDNAPAIQMPISPLQ-DGREKTLLEVLNYLVPDL 235
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: A0A6A3ZAH7_9STRA (Autophagy protein 5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZAH7_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.010e-37 Identity = 87/252 (34.52%), Postives = 132/252 (52.38%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQR----NLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-----LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL 775
++ W G IP S+D++E+T+L P P Y ++PRM+FL T V +F + P ++W E A+G PL WH+P G+L DL+ G G DGA+ LPW +TVHF G P + P + E+ + H+M++LKQA +L++GS+ A M L + QT++W ++ ND + + E G LR +P+RV + AP Q+PI P + NG TL + LS+ L
Sbjct: 11 LKQRVWAGRIPVVFSLDANEVTTLHAPRPFYAMVPRMSFLVSQTRDVVEYFRDAAPPMSAMQGASIWFE--ANGVPLHWHLPFGLLRDLLC----GPGADGAKD-----------------LPWALTVHFLGFPSDVLLPCDNEQSVESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYLEATQELHLDGGVDASALRHLPLRVHLDNAPAIQMPIAPLQ-NGREKTLLEVLSYLLTDL 238
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: W4FJG9_9STRA (Autophagy protein 5 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJG9_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.170e-36 Identity = 86/250 (34.40%), Postives = 129/250 (51.60%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCV-TDTVSHHFGEVGP-----DAQRNLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDS-LFGKGAGLRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL 775
++ + W+G +P S+D+SEIT+LQ P P Y ++PR++ L C TD V +HF +V P R +W E G PL+WH+P GVL+DL GD +LPW++TVHFQG P + + P + + + H+MN+ KQ+++L GS+ M L ++ T+LW ND +F + + L R VP+RVL+ P QLPI P ++RD LS P +
Sbjct: 6 IRKQLWEGHVPVCFSIDASEITTLQVPRPYYAMVPRVSSLMCAATDAVINHFKDVAPPMLSSQLSRYVWFE--FKGLPLKWHLPFGVLYDL-----HGD----------------------DMLPWEVTVHFQGYPSQHLLPCDNLQAVEMHFMNSYKQSMFLLYGSTKWIMNLPQQKHTQLWEGHVKNDFSMFESVHATLVPSSEPKRHVPLRVLLPHEPTIQLPISP-----SLTSVRDVLSHLLPDI 221
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: D0N0M5_PHYIT (Autophagy protein 5 n=22 Tax=Phytophthora TaxID=4783 RepID=D0N0M5_PHYIT) HSP 1 Score: 145 bits (366), Expect = 3.920e-36 Identity = 84/252 (33.33%), Postives = 131/252 (51.98%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQR----NLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-----LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL 775
++ W G IP S+D +E+T+L P P Y ++PRM++L T V +F + P ++W E A G PL WH+P G+L DL+ G V+G+A LPW ITVHF P+ + P + E+ + H+M++LKQA +L++GS+ M L + QT++W ++ ND + +R+ G LR +P+RV + AP Q+PI P + NG TL + L++ P L
Sbjct: 3 LKQRVWAGRIPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVDYFRDAAPPMSAIQGASIWFE--AKGAPLHWHLPFGLLRDLLCGPG-----------------VDGDAD----LPWAITVHFLNFPKDVLLPCDNEQSVESHFMHSLKQATFLRMGSTKVVMALPEAQQTQIWTSISQNDYESYRQATYELHLDGGVDASALRHLPLRVHLDNAPAIQMPISPLQ-NGREKTLLEVLNYLLPDL 230
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: W4FLU3_9STRA (Autophagy protein 5 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLU3_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.280e-35 Identity = 81/229 (35.37%), Postives = 121/229 (52.84%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCV-TDTVSHHFGEVGP-----DAQRNLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDS-LFGKGAGLRVVPVRVLVGGAPPSQLPIPP 712
++ + W+G +P S+D+SEIT+LQ P P Y ++PR++ L C TD V +HF +V P R +W E G PL+WH+P GVL+DL GD +LPW++TVHFQG P + + P + + + H+MN+ KQ+++L GS+ M L ++ T+LW ND +F + + L R VP+RVL+ P QLPI P
Sbjct: 6 IRKQLWEGHVPVCFSIDASEITTLQVPRPYYAMVPRVSSLMCAATDAVINHFKDVAPPMLSSQLSRYVWFE--FKGLPLKWHLPFGVLYDL-----HGD----------------------DMLPWEVTVHFQGYPSQHLLPCDNLQAVEMHFMNSYKQSMFLLYGSTKWIMNLPQQKHTQLWEGHVKNDFSMFESVHATLVPSSEPKRHVPLRVLLPHEPTIQLPISP 205
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: A0A0W8D8Q0_PHYNI (Autophagy protein 5 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D8Q0_PHYNI) HSP 1 Score: 144 bits (363), Expect = 7.630e-33 Identity = 84/252 (33.33%), Postives = 131/252 (51.98%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQR----NLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-----LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTLRDCLSWCCPSL 775
++ W G +P S+D +E+T+L P P Y ++PRM++L T V +F + P ++W E A G PL WH+P G+L DL+ G P SD + LPW ITVHF P+ + P + E+ + H+M++LKQA +L++GS+ A M L + QT++W ++ ND + +R+ G LR +P+RV + AP Q+P+ P + NG TL + LS+ P L
Sbjct: 35 LKQRVWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWFE--AKGVPLHWHLPFGLLRDLLCG------------PGVDSD---------TDLPWAITVHFLNFPKDILLPCDNEQSVESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATHELHLDGGVDASALRHLPLRVHLDNAPAIQMPVAPLQ-NGREKTLLEVLSYLLPDL 262
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Match: W2PK77_PHYPN (Autophagy protein 5 n=18 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PK77_PHYPN) HSP 1 Score: 134 bits (338), Expect = 9.150e-33 Identity = 79/241 (32.78%), Postives = 124/241 (51.45%), Query Frame = 2
Query: 47 VQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVTDTVSHHFGEVGPDAQR----NLWLEDTASGEPLRWHIPTGVLFDLIVGSEEGDGHDGARPPRPWSDEVEGEAVKRSLLPWKITVHFQGCPQRQVFPLEKEERIRRHYMNALKQALYLQLGSSHAGMTLAKENQTRLWHAVRTNDVKVFREIDSLFGKGAG-----LRVVPVRVLVGGAPPSQLPIPPKRPNGEAFTL 742
++ W G +P S+D +E+T+L P P Y ++PRM++L T V +F + P ++W E A G PL WH+P G+L DL+ G P SD + LPW ITVHF P+ + P + E+ + H+M++LKQA +L++GS+ A M L + QT++W ++ ND + +R+ G LR +P+RV + AP Q+P+ P + NG L
Sbjct: 13 LKQRVWAGRLPVVFSLDPNEVTTLHAPRPFYAMVPRMSYLVSQTRDVVEYFRDAAPPMSAIQGASIWFE--AKGVPLHWHLPFGLLRDLLCG------------PGVDSD---------TDLPWAITVHFLNFPKDILLPCDNEQSVESHFMHSLKQATFLRMGSTKAVMALPEAQQTQIWTSISQNDYESYRQATHELHLDGGVDASALRHLPLRVHLDNAPAIQMPVAPLQ-NGTVGLL 229 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1170.1412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1170.1412.1 >prot_F-serratus_M_contig1170.1412.1 ID=prot_F-serratus_M_contig1170.1412.1|Name=mRNA_F-serratus_M_contig1170.1412.1|organism=Fucus serratus male|type=polypeptide|length=375bp MEGLFREVQNEAWDGMIPAELSMDSSEITSLQRPLPLYLLLPRMAFLPCVback to top mRNA from alignment at F-serratus_M_contig1170:275321..279942- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1170.1412.1 ID=mRNA_F-serratus_M_contig1170.1412.1|Name=mRNA_F-serratus_M_contig1170.1412.1|organism=Fucus serratus male|type=mRNA|length=4622bp|location=Sequence derived from alignment at F-serratus_M_contig1170:275321..279942- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1170:275321..279942- >mRNA_F-serratus_M_contig1170.1412.1 ID=mRNA_F-serratus_M_contig1170.1412.1|Name=mRNA_F-serratus_M_contig1170.1412.1|organism=Fucus serratus male|type=CDS|length=2250bp|location=Sequence derived from alignment at F-serratus_M_contig1170:275321..279942- (Fucus serratus male)back to top |