mRNA_F-serratus_M_contig1170.1410.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1170.1410.1
Unique NamemRNA_F-serratus_M_contig1170.1410.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: D7FR84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR84_ECTSI)

HSP 1 Score: 597 bits (1540), Expect = 6.470e-196
Identity = 372/730 (50.96%), Postives = 451/730 (61.78%), Query Frame = 3
Query:  612 MEVQVAYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQKLIFKGKTLPSDDDSLEVAGIV--SKAKSARGASGEAK-------FTQEKRLMLVGSTASEVQVVHKLREDAVVRNDLEGVAIPKGYKKVALNIPSGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTG-RTLAGR------ELAGLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCGHSTVKEDSAVAASEGTHKCEGELASAGDTARGVEEEKDELGGAEAGNPGGDNPMDTTEPTEMVLEEATTQEDM-------AAEVIGGVTDPVRSNAERRGRAGGATVEAIGDSATGFPSPMEVTQEKGNA---------PFANDPPAPQQ--------------------------------LLPLPSTAPGSPLDELVAMGFARDAADEALYVSGGSVAEAASRLLAPGLSSVG------------VGAGINPSDEAFSSSGRTGMGERPRLSREVRVQQATEKIAGHNDRGKALKCLEVLEAMLRNILEHPAEEKFRRVRRSNGKFKASVGSVTGGVELLLAAGFDVQGTDQLKLGRQDPGLIWLARTTVEGWRERL 2573
            ME+QV++RG+ L V G+++ T V  LK +LEELT VPVANQKLI KGK L  +  +LE AG++  S A++A   +   +       F Q+ +LMLVGS  SEV+ V + ++   VRNDL G   PKGYKKVALN P GP   SPYRFE IETLPGLP E+ AR+ILESLA DPGVR+VLEKH+WTVGALCELYPEGKVG+S  CV+GLN NHG KI LRLRTDDL+GFRKILSIRKVLFHELAHN+ S+HDDNFY LMRQVEREAAEL+W +Q+G RT+AGR      E AGLPG   G+ILVKEAFEGGSGRLGG+S   T +FSA ++AGQAAV RLTPEEQE+EDCCGH+                        G  A   E EK+E               +T      V E + T +D+             G T       + + R G       G   TG  S M V +E+G+          P     P P +                                L P P T   S LDEL+AMGF R+AA EAL  SGGS+ +AA RLL PG+   G             G G   S EA   +G  G     RL R+VR+QQA +++AGH DR +A++CL+VL A+LRNI+EHP E KFR+VRRSNGKFKASVG+V GGV+LLLAAGF+ +G DQL+LGRQDPGLIWLA++TVE W+ERL
Sbjct:    1 MELQVSFRGEPLTVTGVDHATAVENLKNKLEELTAVPVANQKLILKGKALRDEAGTLEAAGVLVPSPAQTATTTTATERHEEKGDTFVQKSKLMLVGSKPSEVEEVLREQDRVRVRNDLNGQVTPKGYKKVALNYPPGPSDLSPYRFERIETLPGLPEEETARKILESLAADPGVRAVLEKHRWTVGALCELYPEGKVGVSDKCVLGLNQNHGMKIFLRLRTDDLRGFRKILSIRKVLFHELAHNDISDHDDNFYMLMRQVEREAAELNWMQQSGGRTVAGRPPAPRAEPAGLPGGGEGFILVKEAFEGGSGRLGGDSNAFTKIFSAGEMAGQAAVQRLTPEEQEVEDCCGHTK-----------------------GVAAGAAEVEKEE------------RLAETNAMASSVSEMSVTSDDLDDGVAPALTSAAAGATSGDHGGTDGKTRGGEERQAERGQRLTGA-SEMNVAEEEGDGISVEPVDSPPLEAAAPTPLEXXXXXXXXXXXXXXXXXXXXXXXETLAAAATKLGPAPRTPESSSLDELLAMGFPREAAVEALSASGGSIPDAAYRLLTPGMMESGRNNSSEAVGMTAAGGGAQGSREAGRDTGSEGA---VRLPRDVRLQQAADRVAGHADRARAVQCLDVLAAVLRNIMEHPEEAKFRKVRRSNGKFKASVGAVAGGVDLLLAAGFEERGDDQLELGRQDPGLIWLAKSTVEAWQERL 691          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A836CEA9_9STRA (WLM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA9_9STRA)

HSP 1 Score: 276 bits (705), Expect = 1.820e-75
Identity = 178/407 (43.73%), Postives = 234/407 (57.49%), Query Frame = 3
Query:  612 MEVQVAYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQKLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDAVVRNDLEGV-AIPKGYKKVALNIPSGPPA-HSPYRFEGIETLPGLPNEDRAREILESLADDPG---------------------------VRSVLEKHKWTVGALCELYPEG----------------KVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELA-----------GLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQA-----AVLRLTPEEQEIEDCCGHSTVKEDSAVA 1649
            +++ VA++G T+ ++   + T V LLK+ LE+ T VPV NQKL++KGKTL    DSLE  G++          G AK      LML+GSTA++V  V +      VR+DL G   +PKGY KV L +    P   SPY FE ++ L GLP +  A+ ILE LA D G                           VR+V+ KHKWTVG L ELYPEG                KVG+S TC+MGLN N G+ IRLR+RTDDL+GFRK LS+ KVL+HELAHN + +HD++FY LMRQ+EREA ELD+ +  GRT++G                      GY+LV+EAF GG+ RLGG+S GL  + +A+++A QA     A+LRLTPEE+E+E  CG    K  S  A
Sbjct:   14 VQLDVAWKGSTISLQVQPDWT-VQLLKEHLEQRTAVPVLNQKLVWKGKTLKEPYDSLEETGVL--------VPGRAK------LMLIGSTAADVVAVSQPAPHVRVRDDLTGEEVVPKGYVKVPLGVGGTDPRDRSPYVFERVQALRGLPRQAEAQAILEELAADRGTCYNAXXXXXXXXXXXXXXXXXXXXXXVRAVMAKHKWTVGLLTELYPEGXXXXXXXXXXXXXXXXKVGVSETCLMGLNENRGQTIRLRVRTDDLQGFRKPLSMLKVLYHELAHNVYGDHDNDFYMLMRQIEREANELDFAQSAGRTVSGARSVHRAEXXXXXXXXXXXXSGGYVLVREAFAGGAQRLGGDSAGLARVLTAREMAAQARITSAALLRLTPEEEEVEHACGCHNAKPHSQTA 405          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7R9VR13_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VR13_9STRA)

HSP 1 Score: 240 bits (612), Expect = 9.150e-67
Identity = 148/349 (42.41%), Postives = 210/349 (60.17%), Query Frame = 3
Query:  624 VAYRGKTLEVEGLENTTPVGLLK----KRLEELTKVPVANQKLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDAV-----VRNDLEGVAIPK-------GYKKVALNIPSGPPAHSP--YRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCG 1616
            V++RG+ +++  L     VG LK    K +++   +   + K++ KG+ L +DD  L    + +         G  K  +  RLM  G++ +E++   +  E+ +     VR+DL  V           G + +A        A +P  Y F  IETLP LP+E +A+EIL SLA+DPG+ + + KH+W VG L E++PEGKVG    CVMGLN N G+KI LRLRTDDLKGFRKILSIRKVLFHELAHN  S+HD +F+ LMRQ+E+E  E+DW + +G T+ G  +    G+  G       FEGG+ RLGG+S+ L+H   A+ LA +AA++RLT EE+EI+ CCG
Sbjct:   13 VSWRGEKIDLP-LSRGATVGSLKALIVKSVDKSLLLSAGDVKILHKGRVLANDDAELYDLVVPN---------GGKKPPKVVRLMATGASEAEIKERDRSFEEGLRAAPRVRDDLTAVGRADLARRREAGQRTLAQAAARSRAAKAPPQYSFGHIETLPNLPDEKKAKEILTSLANDPGILACMAKHRWNVGCLAEMFPEGKVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKILSIRKVLFHELAHNVHSDHDGDFFLLMRQIEKECNEMDWTQGSGSTIGG--VVSHEGSGVGMAGHSTKFEGGTHRLGGDSDFLSHSLPARDLAARAAIMRLTAEEEEIQQCCG 349          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7S4N2I3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N2I3_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.330e-64
Identity = 147/354 (41.53%), Postives = 202/354 (57.06%), Query Frame = 3
Query:  618 VQVAYRGKTLEVEGLENTTPVGLLKKRL----EELTKVPVANQKLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDAV-----VRNDLE-----GVAIPKGYKKVALNIPSGPPAHSP-------YRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCG 1616
            V V++RG T +      +T VG LK +L    ++   +   + K++ KG+ L  DD +L    +V         SG  +  +  RLM  G++ +EV+   +  E+       +R+D+      G A  +   + AL + +   A +        Y F  IE  P LP  D+AREIL SLA+DPG+ + + KHKW VG L E++P+G VG    CVMGLN N G+KI LRLRTDDLKGFRK LSIRKVLFHELAHN  S+H+ +F+ LMRQ+E+E  E+DW+R +G T  G         E         FEGG+ RLGG+S GL+H   A+ LA +AAV+RLT EE+EI   CG
Sbjct:   13 VVVSFRGTTADFLLTRGSTTVGCLKAQLATSVDDSLGMSAGDVKILHKGRVLSEDDANLYELLVVGPNVGGVKKSGSTR-RRTVRLMATGASTAEVEARDRAFEEGARAAPRIRDDISQGGITGAARRREEGQRALEMAAARSARTANGGGSLRYGFGAIEIFPNLPERDKAREILTSLANDPGILACMAKHKWNVGCLAEMFPKGYVGQDEVCVMGLNQNKGQKILLRLRTDDLKGFRKNLSIRKVLFHELAHNVHSDHNGDFFLLMRQIEKECNEMDWKRGSGSTTTGTVGCQHAVEENSVATSSRRFEGGTRRLGGDSLGLSHQIPARDLAARAAVMRLTVEEEEIRRGCG 365          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: W7TIG9_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIG9_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.920e-62
Identity = 227/688 (32.99%), Postives = 331/688 (48.11%), Query Frame = 3
Query:  612 MEVQVAYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQKLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVH----KLREDAVVRNDLEGVAIPKGYKKVALNIPSGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGR-----ELAGLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCGHSTVKEDSAVAASEGTHKCEGELASAGDTARGVEEEKDELGGAEAGNPGGDNPMDTTEPTEMVLEEATTQEDMAAEVIGG-----VTDPVRSNAERRGR-AGGATVEAIGDSATGFPSPMEVTQEKGNAPFANDPPAPQQLLPLPSTAPG-----SPLDE----LVAMGFARDAADEALYVSGGSVAEAASRLLAPGLSSVGVGAGINPSDEAFSSSGRTGMGERPRL-----------SREVRVQQATEKIAGHNDRGKALKCLEVLEAMLRNILEHPAEEKFRRVRRSNGKFKASVGSVTGGVELLLAAGF-DVQGTDQLKLGRQDPGLIWLARTTVEGWRE 2567
            +EV ++++G+  ++  L  +T +  ++   E  T +  A+QK+I KGK L   D S+ +  + +  +  +             L+L+G+T + +  +     +L    ++ NDL G  +  G K   +  P   P    Y F+ IE LP LP++D AR IL  LA DPGV  V+E++KW+VGALCE+YPEG VG+S+ CVMGLN N G++I LRLRTDDL G+RK LS+RKVLFHELAHN  + HD  F+ LMR +ER+    +    +GR + G      E  G+PG           FEGGSGRLGG         SA+ +AG AA+ RL+ EEQ I+D CG                 +  G +   G T      E+D            DNP  + + T    E+A   E+   +         VT     +  R GR A G   + +  S T  P    V +  G+   ++     +  L   S + G       +DE    L+ +GF      EAL++  G +  AA  LL         G G      A SS+  +    RP             SR+ RV +A +++A     G        L++ML+ +LEHP E KFRRVR +N KF+ +VG     ++LL   GF + +G   L+  R DPGL+W  +  VE  +E
Sbjct:   13 VEVNLSFKGQQ-DLLHLPASTTLADVQALAETKTGIHPAHQKIICKGKKLT--DPSITLGQLRADVEVIK-------------LVLIGTTTASLAALAEAPARLNNIRII-NDLGG-NMSGGIKISTVAAPVLRPRK--YGFQSIEVLPHLPDQDMARRILTDLASDPGVLLVMERYKWSVGALCEMYPEGLVGVSSVCVMGLNENKGQRIFLRLRTDDLLGWRKALSVRKVLFHELAHNVHAAHDQPFHLLMRNIERDVNAFN---SSGRAVGGALHLPAEGGGMPGG---------LFEGGSGRLGGRGAST----SARVMAGLAAIQRLSKEEQAIDDACGSG---------------RQSGTMGLTGVTRP---SERDS-----------DNPNRSIKATLQAQEDAAHTEEKGEKDSKSPDSELVTVLPAEDPSRSGRTASGPGYDQL-PSPTPSPLKPSVPENPGSLGDSSLDEMRESALHFHSHSAGCCSSTDRMDEAAAQLMGLGFGEAQVLEALHLYDGDLMRAADYLLELAAREERAGEGEGQIVGA-SSANLSDPSPRPPAAAIDTPTIPSDSRQARVMEAAQRLAREASEGSNA-AFATLQSMLQALLEHPQELKFRRVRLNNAKFQRTVGRFPAAIDLLRDVGFQEREGGTVLEYTRGDPGLLWWGKCVVEQAKE 632          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7S4RIJ1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RIJ1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.170e-58
Identity = 146/371 (39.35%), Postives = 213/371 (57.41%), Query Frame = 3
Query:  624 VAYRGKTLEVEGLENTTPVGLLKKRL-----EELTKVPVANQKLIFKGKTLPS---------DDDSLEVAGIV-----SKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDAV------VRNDLEGVAIPKGYKKVALNIP------------SGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGG---ESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCG 1616
            +++RG+ +E+  L+  T +G +K  L     + L  +P  + K++ KGK L +         ++D + +  ++      KAK+ +  S      +  RL+  G ++SEV+   +  E  +      VR+D+  +   K  ++  L                G    +   F  IETLP LPNE +AR+ILE+LA+D GV + + KH+W VG L ELYPEGKVG +  CVMGLN N G+KI LR+RTDDLKGFRK+LSIRKVLFHELAHN  SEHD+ F+QLMRQ+ERE  +LDW R  G T+    +     ++   +     ++GG+ RLGG   ESE   H+   ++LA +AA++RLT EE+EI+  CG
Sbjct:   19 ISFRGEKVEI-SLDLDTTIGDVKSFLLSSVDDSLCMMP-GDVKILHKGKVLMTPEGIANECRNEDDVNMRELLLHFSQKKAKTTKTTSKATTLPKIIRLIATGVSSSEVEASDRDMEKGISMASKQVRDDITEMGKIKEARRKRLGRDMLRKAATAQGGRGGGGGETSSGFGKIETLPNLPNEKKARDILETLANDRGVLACMAKHRWNVGCLAELYPEGKVGETDVCVMGLNQNKGQKILLRIRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDEQFFQLMRQIERECNDLDWTRSQGNTIGSGGVGSSYADDH-ELNSDGLYQGGTYRLGGDSNESENRHHM-PVRELAARAAMMRLTAEEEEIQKHCG 385          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7S3LEW3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEW3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 2.960e-57
Identity = 145/356 (40.73%), Postives = 197/356 (55.34%), Query Frame = 3
Query:  624 VAYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQ-----KLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASE-VQVVHKLREDAVVRNDLEGVAIPKGYKKVAL-----------------NIPSGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGGESEGL--THLFSAQQLAGQAAVLRLTPEEQEIEDCCG 1616
            ++YRG  +E+  LE  T V  LK+R+ + T   V N      KL+ +GK L  D + L    I  + K         K  +  +++  G +  E VQ  H LR+       +      KG K++                   N+ +G   +  Y F  IETLP LP+ ++A+ ILE+LA+DPG+++ + KH W VGAL ELYPEGKVG S  CVMGLN N G +I LR+RTDDL+GFRK+LSIRKVLFHELAHN  SEH+  F+QLMRQ+E E   LDW +  G T    E  G              +EGG+ RLGG+      T+  S ++LA QAA+ R+T EE+EI++ CG
Sbjct:   14 ISYRGSKIELP-LEPPTTVLALKQRVVQQTDRHVNNLSTDDIKLMLQGKVLKQDAEDLYETLITRRKK---------KPQKVYQILATGLSQREAVQAEHDLRDGLQAAPRIRDDHTDKGRKEMERRKRLGRQMMTKIYTRKGNV-AGSSGYGDYGFGTIETLPNLPHREKAQRILETLANDPGIQACMAKHNWKVGALAELYPEGKVGESEVCVMGLNQNKGMRILLRVRTDDLRGFRKMLSIRKVLFHELAHNVHSEHNGKFFQLMRQIEAECNSLDWTKGAGLTDMSNEDGGT-------------YEGGTFRLGGDKNQAAPTNNLSTRELAAQAALRRMTLEEEEIQNNCG 345          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7S1G5Y2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5Y2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 6.760e-56
Identity = 116/218 (53.21%), Postives = 149/218 (68.35%), Query Frame = 3
Query: 1011 SPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGGESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCC--GHSTVKEDSAVAASE 1658
            SP RF  I+ LPGLP E+ AR +L +LA+DPGV +V+ KH W V  L ELYP GKVG+S TC+MGLN N G++I LR+RTDDL+GFR +  I++VL+HELAHN   EHD +F+ L R +ERE AELDW +Q GR L G ++  LP    G       F GG+GRLGG++E +  +FSA++LA  AAVLRL+  EQE+   C    S    D+ VAASE
Sbjct:   43 SPMRFGEIKPLPGLPMEEEARALLTALAEDPGVVAVMTKHGWHVPVLSELYPRGKVGVSETCLMGLNRNAGQEILLRIRTDDLQGFRPMRKIKEVLWHELAHNVHGEHDKDFFALNRVLEREGAELDWTQQGGRRLGGAQMF-LPAGGVGAAHDDAPFAGGTGRLGGDAE-VASMFSARELAASAAVLRLSEAEQEVTSLCVTTPSAADADAEVAASE 258          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7S3V5Z3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5Z3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.400e-54
Identity = 135/323 (41.80%), Postives = 189/323 (58.51%), Query Frame = 3
Query:  714 KVPVANQKLIFKGKTLPSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVH-----KLREDAVVRNDLE--GVAIPKGYKKVALNI--------PSGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVK-----EAFEGGSGRLGGES--EGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCG 1616
            K+  A  KL++KGK L  D  +L     +   + A G +   K ++  R+M +G+++ E Q  +       R    +R++L   GVA     ++  +N+         S  P    Y F  I+TLP LP++ +A++IL  LA DPG+ + + KH+W+VG LCELYPEGKVG S  C+MGLN N G+KI LRLRTDDL+GFRKILSIRKVLFHELAHN  S HD  F+QLMRQVE+E  + +         +G  L G  G E GY+        +AF+GG+  LG      G+    SA++L  +AA+ R++ EEQ+IE+ CG
Sbjct:   70 KLGPAEVKLLYKGKVLSDDCVNLFDMLDIYPERIATGQNANIK-SKPIRIMAMGTSSVEAQQQNLELNIAKRNAPRIRDNLSQAGVAEIAARQRQGMNMLSKASKRDSSRDPTQKKYGFGTIQTLPMLPDQQKAKKILHDLAHDPGILACMAKHEWSVGMLCELYPEGKVGESEVCLMGLNTNKGQKIDLRLRTDDLRGFRKILSIRKVLFHELAHNTHSAHDQKFFQLMRQVEQECNDFN--------ASGNSLGGGKGGE-GYVAGGGFDNVDAFQGGTYTLGSSDTGSGVPTTLSARELFARAAMSRMSQEEQDIENACG 382          
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Match: A0A7R9WVU5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVU5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.470e-54
Identity = 150/373 (40.21%), Postives = 209/373 (56.03%), Query Frame = 3
Query:  627 AYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQ----------KLIFKGKTLPSDDDSLE---VAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKLREDA----VVRNDLEGVAIPKGYKKV-----ALNIPSGPPAHSPYRFEGIETLPGLPNEDRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLNVNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMRQVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKE-AFEGGSGRLGGESE------GLTHLF------SAQQLAGQAAVLRLTPEEQ-EIEDCCGHSTVKED 1637
            ++RGK  +VE  ++ T   +    +E+L     + +          +L+ KGK L + +D L     A   S+A   R      K+T    L+   +++S  Q + +  E A     VR+DL      K +++      AL   +  P+ SPY F  I+ LP LP++D AR IL  LA+DPGV + + +HKW VG+L ELYP+GKVG SA CVMGLN N G++I LRLRTDDLKGFRK+LSIRKVLFHELAHN  SEHD  F+QLMRQ+E+E  E+DW + +G       L+   G   G I     +FEGG+ RLG  S+        +H        S ++LA +AA+ R++ +E  EIED CG    +ED
Sbjct:    8 SFRGKKNDVELTDDLTVAAIKDLLVEQLAAAAASTEAGAALTTADIRLVLKGKVLSNANDRLRELICAAECSQAPKKR------KYT----LLATATSSSTKQRLQQQMEVASKSRTVRDDLTTAGQAKEHRRKMQGRRALRNTARTPS-SPYGFGSIDVLPNLPHQDTARGILTQLANDPGVLACMAQHKWKVGSLAELYPDGKVGQSAVCVMGLNKNQGQQILLRLRTDDLKGFRKMLSIRKVLFHELAHNVHSEHDSKFFQLMRQIEKECNEMDWTQGSG-------LSAFDG---GNIADDSLSFEGGTYRLGSSSDVDSGHRATSHSSFRSQSSSHRELAARAALSRMSVQEMTEIEDGCGCGLERED 359          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1170.1410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR84_ECTSI6.470e-19650.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEA9_9STRA1.820e-7543.73WLM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7R9VR13_9STRA9.150e-6742.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4N2I3_9STRA2.330e-6441.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
W7TIG9_9STRA3.920e-6232.99Ubiquitin-associated/translation elongation factor... [more]
A0A7S4RIJ1_9STRA5.170e-5839.35Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3LEW3_9STRA2.960e-5740.73Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1G5Y2_9STRA6.760e-5653.21Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3V5Z3_9STRA1.400e-5441.80Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7R9WVU5_9STRA2.470e-5440.21Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1170contigF-serratus_M_contig1170:231843..240460 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score608.2
Seed ortholog evalue4.5e-171
Seed eggNOG ortholog2880.D7FR84
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009987,GO:0016787,GO:0016925,GO:0018193,GO:0018205,GO:0019538,GO:0032446,GO:0033554,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044877,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0070011,GO:0070628,GO:0070647,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.metallopeptidase activity
EggNOG OGsKOG4842@1,KOG4842@2759
Ec32 ortholog descriptionUbiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Ec32 orthologEc-08_005000.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons9
Model size3777
Cds size1971
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929076.0235887-UTR-F-serratus_M_contig1170:231842..2330371622929076.0235887-UTR-F-serratus_M_contig1170:231842..233037Fucus serratus maleUTRF-serratus_M_contig1170 231843..233037 -
1690962694.4811678-UTR-F-serratus_M_contig1170:231842..2330371690962694.4811678-UTR-F-serratus_M_contig1170:231842..233037Fucus serratus maleUTRF-serratus_M_contig1170 231843..233037 -
1622929076.160183-UTR-F-serratus_M_contig1170:239849..2404601622929076.160183-UTR-F-serratus_M_contig1170:239849..240460Fucus serratus maleUTRF-serratus_M_contig1170 239850..240460 -
1690962694.5739052-UTR-F-serratus_M_contig1170:239849..2404601690962694.5739052-UTR-F-serratus_M_contig1170:239849..240460Fucus serratus maleUTRF-serratus_M_contig1170 239850..240460 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929076.0342321-CDS-F-serratus_M_contig1170:233037..2331961622929076.0342321-CDS-F-serratus_M_contig1170:233037..233196Fucus serratus maleCDSF-serratus_M_contig1170 233038..233196 -
1690962694.4986382-CDS-F-serratus_M_contig1170:233037..2331961690962694.4986382-CDS-F-serratus_M_contig1170:233037..233196Fucus serratus maleCDSF-serratus_M_contig1170 233038..233196 -
1622929076.0496655-CDS-F-serratus_M_contig1170:233997..2340931622929076.0496655-CDS-F-serratus_M_contig1170:233997..234093Fucus serratus maleCDSF-serratus_M_contig1170 233998..234093 -
1690962694.5076327-CDS-F-serratus_M_contig1170:233997..2340931690962694.5076327-CDS-F-serratus_M_contig1170:233997..234093Fucus serratus maleCDSF-serratus_M_contig1170 233998..234093 -
1622929076.068377-CDS-F-serratus_M_contig1170:234452..2352471622929076.068377-CDS-F-serratus_M_contig1170:234452..235247Fucus serratus maleCDSF-serratus_M_contig1170 234453..235247 -
1690962694.5180721-CDS-F-serratus_M_contig1170:234452..2352471690962694.5180721-CDS-F-serratus_M_contig1170:234452..235247Fucus serratus maleCDSF-serratus_M_contig1170 234453..235247 -
1622929076.082394-CDS-F-serratus_M_contig1170:235647..2358151622929076.082394-CDS-F-serratus_M_contig1170:235647..235815Fucus serratus maleCDSF-serratus_M_contig1170 235648..235815 -
1690962694.5254502-CDS-F-serratus_M_contig1170:235647..2358151690962694.5254502-CDS-F-serratus_M_contig1170:235647..235815Fucus serratus maleCDSF-serratus_M_contig1170 235648..235815 -
1622929076.0927017-CDS-F-serratus_M_contig1170:236047..2361371622929076.0927017-CDS-F-serratus_M_contig1170:236047..236137Fucus serratus maleCDSF-serratus_M_contig1170 236048..236137 -
1690962694.5339031-CDS-F-serratus_M_contig1170:236047..2361371690962694.5339031-CDS-F-serratus_M_contig1170:236047..236137Fucus serratus maleCDSF-serratus_M_contig1170 236048..236137 -
1622929076.103953-CDS-F-serratus_M_contig1170:236542..2366411622929076.103953-CDS-F-serratus_M_contig1170:236542..236641Fucus serratus maleCDSF-serratus_M_contig1170 236543..236641 -
1690962694.5417144-CDS-F-serratus_M_contig1170:236542..2366411690962694.5417144-CDS-F-serratus_M_contig1170:236542..236641Fucus serratus maleCDSF-serratus_M_contig1170 236543..236641 -
1622929076.121127-CDS-F-serratus_M_contig1170:236969..2371231622929076.121127-CDS-F-serratus_M_contig1170:236969..237123Fucus serratus maleCDSF-serratus_M_contig1170 236970..237123 -
1690962694.549161-CDS-F-serratus_M_contig1170:236969..2371231690962694.549161-CDS-F-serratus_M_contig1170:236969..237123Fucus serratus maleCDSF-serratus_M_contig1170 236970..237123 -
1622929076.1369793-CDS-F-serratus_M_contig1170:237714..2379951622929076.1369793-CDS-F-serratus_M_contig1170:237714..237995Fucus serratus maleCDSF-serratus_M_contig1170 237715..237995 -
1690962694.5567787-CDS-F-serratus_M_contig1170:237714..2379951690962694.5567787-CDS-F-serratus_M_contig1170:237714..237995Fucus serratus maleCDSF-serratus_M_contig1170 237715..237995 -
1622929076.1498232-CDS-F-serratus_M_contig1170:239720..2398491622929076.1498232-CDS-F-serratus_M_contig1170:239720..239849Fucus serratus maleCDSF-serratus_M_contig1170 239721..239849 -
1690962694.5650494-CDS-F-serratus_M_contig1170:239720..2398491690962694.5650494-CDS-F-serratus_M_contig1170:239720..239849Fucus serratus maleCDSF-serratus_M_contig1170 239721..239849 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1170.1410.1prot_F-serratus_M_contig1170.1410.1Fucus serratus malepolypeptideF-serratus_M_contig1170 233038..239849 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1170.1410.1

>prot_F-serratus_M_contig1170.1410.1 ID=prot_F-serratus_M_contig1170.1410.1|Name=mRNA_F-serratus_M_contig1170.1410.1|organism=Fucus serratus male|type=polypeptide|length=657bp
MEVQVAYRGKTLEVEGLENTTPVGLLKKRLEELTKVPVANQKLIFKGKTL
PSDDDSLEVAGIVSKAKSARGASGEAKFTQEKRLMLVGSTASEVQVVHKL
REDAVVRNDLEGVAIPKGYKKVALNIPSGPPAHSPYRFEGIETLPGLPNE
DRAREILESLADDPGVRSVLEKHKWTVGALCELYPEGKVGISATCVMGLN
VNHGEKIRLRLRTDDLKGFRKILSIRKVLFHELAHNEFSEHDDNFYQLMR
QVEREAAELDWRRQTGRTLAGRELAGLPGNERGYILVKEAFEGGSGRLGG
ESEGLTHLFSAQQLAGQAAVLRLTPEEQEIEDCCGHSTVKEDSAVAASEG
THKCEGELASAGDTARGVEEEKDELGGAEAGNPGGDNPMDTTEPTEMVLE
EATTQEDMAAEVIGGVTDPVRSNAERRGRAGGATVEAIGDSATGFPSPME
VTQEKGNAPFANDPPAPQQLLPLPSTAPGSPLDELVAMGFARDAADEALY
VSGGSVAEAASRLLAPGLSSVGVGAGINPSDEAFSSSGRTGMGERPRLSR
EVRVQQATEKIAGHNDRGKALKCLEVLEAMLRNILEHPAEEKFRRVRRSN
GKFKASVGSVTGGVELLLAAGFDVQGTDQLKLGRQDPGLIWLARTTVEGW
RERLAT*
back to top

mRNA from alignment at F-serratus_M_contig1170:231843..240460-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1170.1410.1 ID=mRNA_F-serratus_M_contig1170.1410.1|Name=mRNA_F-serratus_M_contig1170.1410.1|organism=Fucus serratus male|type=mRNA|length=8618bp|location=Sequence derived from alignment at F-serratus_M_contig1170:231843..240460- (Fucus serratus male)
CCCCTGATGCGTTCCGAAGGTCTAGACGCGTTCAGACTTTTCTTTAAAAA GCAAAAAACGTACTAACTACTGTATACCACAGGCGTGGAAAGTTTGAACT TGAAATACTCCGCACATTCGTCCCGCGGTCTCGAATCTCGTAGCCCATAA CATTCCGCTGATAGGGCGAAGAACTCAACCAAGTACTGTACTCCCTCTCC CCACCACAGCTTCGTAAACTCATTCGACTAACCATCCAACTAGCAACTAG CCGTCGTGTGCGCGCGACTCTTGCTTTTTTTGGAAGACTGCGGCAAAAAG CTCGAGTACGTGCTTACGGATTCCCCCGGGACTGTACAAGTTGGGACTGA CCACGACGAGGTAACACGTGGTCGGTTCGACTCGGGCTGGACGGAAGTTT GCGCGTGTAAGCGTGAGAGCTTTGGAAATACCTTTGTGGCGATAAATTCA CAGGCTGGATTATTCCCGCCAAGGACGCCATCCGTCGATAGTGGCGACGA CGGAGCAGCTGTGATCGCAGGCTGTAACGGGTTATACTGTACCTGAGGAG AGAGCCAGCAGCCAGCTGGTTCATCAGGCTCTCAAGTCTGTTGACAGAGA ACTAAGACTGGATGGAAGTTCAAGTCGCATACCGTGGCAAGACCCTGGAG GTCGAGGGACTGGAAAACACGACGCCTGTCGGTCTTCTGAAGAAAAGGCT GGAAGAGTTGACCAAAGTGCCTGTTGCAAATCAAAAGCTGGTGAGAACGA ACCAACCCACATCAAGTATAGTATTTGTACTGTAAAGAAGAAATATGTCT GCAGAAAACCTTCAAAATGCTGCATTTGTCCAAGGATGACAGAGTCCTCT CCTCTACCACTAGACTACAAGTACTGTACGGGCCAGTTCAAAAGCAAAGT ATGTTGCTCGACTAGTACAAGTACTTGTAATGGATTTGTTTCTATGTAGC TAAACCAGGTATACCTTTTGAGATATTCCTTCCTGCGGCCGTCAACCGTG AAAGAAGGTACAGTACTGTAGTCCATCGCGTGCATGGTCACTCGACGCCG CGGAGAGCCCTAGCATTATTTTTGGTACAATAGTAGATATGGCCCCTACA GATTACGATTCGTACTATTATACAATGCTTTCTGGAGGACACTTATTTAC AAAATCTGAAAAATTAGAGTACATTATCCTAGGCAAAATTCCAAGCGCAC GCTACTACTTCTATACTTCAATGCTCTTAGCTTTGAATCACAGCAGACGT GAAGGACCGGCAGCCCTTGGACGTGGGAACAAAGAAAACAAAAACAAAAA TCTCAAGATTGGGCACTTAAGACAAGAAAGCGGGAGACGAACAAGCAGCA AATAGAGCGCCGGTCTCCTAATTCGAGGGGCTATTTGTTCCAGTATTGAG ATTCGGGTTTGCCCAGGGGATATCGGCATGTATCTTACCGGGGCGGGTAA GAGAGCACATCTTTTGTAGCACGCGTCCTCTGCGGGGAGTTTACACGCCA GAAGTACATTCCGATGCAGCATAGTCCTAGCTCTAAGTAGAATTTGCCGT TTTTCACATTTTTTTTCCCGAACGTATCTATTATAGACCTTCTGAGCATA TCCCCCAATGAGGGGGAAAAAATGTCAAAACGTTTAGGTGGGATCACAGA CTGCAAAGACAAAACCGTATATGGCATTTAATCGGGTTCCCCAATGGTAG TAACGTTAGGTCAACAGTATAATATCGGGGAGAAACCCATCGTTATACTG TACACTTACATTAATCGCCATGCAGTTCTACGTTTTCTAGTAATTGATCC GTCGGGATATCTGAAAAGGCAGCACCCGTAACTCGAACTAGCTTTGAGGG TTACTGTCCCTGAGCCGGCGGACTCTTGGCAGTGAACGCCATCGGTACGC AATTGCGTGACCCGATAAACTCGGAACTGACCCGATGGTGTATGGCGTAA TAACTATATGGGCGCCGCCGCGGAAATCGGGAGGAAATTCCGCGCGAATA AGCACCAGATTCATCCTGAGAGTGGAGAATGAGCAGTAGGCTGACGCGGA ACGAGACGACCGAACCCGTCTCGCTAGACCAAATTGTCAGGCGCAAACGG GGAGAGGGAAATACTAATTTTCCCTGTTCAGCTGACCCCGAGGATAGGAT TGGCAACCCTACCGGTTGATGCACGGTCCGCTGTACGTGATGGCCATATA TACATACATGTGTACATCATGCACACATACATACACTCGTGGGGATCATA CCTAAAAGAGTTCATCGGTGATTAAGCTTAGCGTCTTTCGTGGCCGTAGA TCAAGCCTGTTACTTCACACACGTTCCTATTAATAGTTGCTGTGGCCCCT TCTCCCAACTAAACGATTCTTCGCTCTTTCCACGTTCTTCCCAACCTTAC ACCATAAGAGCTAATGTTGTACATTTGCACATATATATATATATATACGG TACACACATTGGCAGATTTTCAAGGGGAAAACGTTACCAAGTGATGACGA CTCCTTGGAAGTTGCCGGCATCGTCTCGAAGGCGAAGTCCGCACGGGGGG CATCGGGGGAGGCAAAGTTTACGCAGGAGAAGCGTCTGATGCTGGTTGGG AGCACGGCTTCCGAGGTGCAAGTGGTGCACAAGCTCAGGGAGGACGCGGT CGTCCGCAACGACCTCGAAGGAGTGGCCATTCCCAAGGGCTACAAGAAAG TCGCGCTCAACATCCCGTCCGGTCCCCCGGCCCATTCTCCGTACAGGTGG GCGCGAGAAGGGGTAACGGTATTGTTTCAGCGCGTATGCGCTGCTGTGAA CTGCATATATTGTGCTTAGGTTTTGCCCAGAATACCGCTGAAAGCATCTC GTACAGACAGCGCAGTGCTGCACACCAGTCACTACTGTCGTGCATGTGCG TGTTTTTGGAAGGTTGAGAGTACCGTGTTTAATGTGGCTCGGTCGGCATC CTTTGTAGCCTCGTTTTCTGCTGTGTAAGACTTGCTTAGCAATATACGGT TAGAGGCTCCATGCTACACGTTGTTTGATGGTAAATTTGCGAATTTAATT CCTTAAGCGTGCTCCCCGCCTCAGGGCCTTCCGCTCACCCCCCCGCCTCA GGGCCTTCCGCTCACCCCCCCGCTCACCCCCCCGCTCACCCCCCCTCACC CCCGCTCCCCCCGCTCACCCCCCGCTCACCCCCGCTCACCCCGCTCACCC CCGCTCACCCCCGCTCACCCCCGCTCACCCCCCGCTCACCCCCCGCTCAC CCCCCCGCTCACCCCCGCTCACCCCCGCTTAGGTTCACCCCCCCGCTCAC CCCCCCGCTCACCCCCCCGCTCACCCCCACGCTTTAGGTTCGAGGGTATA GAAACCCTTCCAGGATTACCGAACGAAGACCGGGCCAGAGAAATTCTGGA GTCTTTGGCGGACGACCCGGGCGTGCGATCGGTGCTGGAGAAGCACAAGT GGACCGTAGGCGCACTTTGTGAGCTCTATCCCGAGGGAAAGGTGTGTGTT GGCGTTGAACGAGTGATCAGCGTCTGCTTTGACGACCTCAGAAGGCGATA AGATACGCTTGCAAACCGCCCTCCCTTCAAGCTTACACGCTCGCGGTGCT GATCGCCCTCAAAAACCGTACATGGGGTTGGGGTTTGGGGAAGCGAGACT TGAGCTCGATCGAGTAGATTTCATGCGAAAACGACCCTCTTTAGCGGGCT GGCCACTAGAGTGTTGCCGTCGCGACTACTGTCTTGGGCAAGTCCCGAGC GGGAAGATGTTTCTTTCACCCCGACTGCCCGCCGATGTCATCGCCGACCC CGCCAACTGGCGTTCACAGGTGGGCATTAGCGCCACGTGTGTGATGGGAC TCAACGTAAACCACGGGGAGAAGATTCGGTTACGGCTTCGAACGGACGAT CTCAAAGGGTTTCGGAAGGTGAGCCTTCGAGACTGTCACTTTATATCTTT CATCCTTCTCCTTGCTGTCCCGTTCGTTTTCCCCATCGAGTGCCTTGAAG CGTTTGCGAGCTCGTTGATGCTTGTCCACCAAGGTTTCACTAAGATCGTC TTCGTGTTAGTGCAGGGGAGTAAGCTTGCGAGTTCGCTGATGCGCTCGCA GCGTTTGTAAATTGTCCATCTAGAAGGGGTCCTATGTTAATGGTAATCTG GGTCGTTACTACGCCATCGCTCCTCATAGTACTCCGTTTTCTGCGCGCTC CTTGTACCCTTGTCCCTTGTACGCACACTTGCTGAAACGACCCGCGCCGT TACGTTCTCGCGTCTCAAACCTCTCGACTGATTCGTCGTTGTACCATCGT TTTATCGCGTTCACCTGCGTCAGATCCTGTCCATCCGGAAGGTACTCTTC CACGAGCTGGCCCACAACGAATTTAGCGAACACGACGACAATTTTTACCA GCTCATGCGACAGGTACCTCTATGTACTGTAGATGAAGACGTCTTGCGCG TGTTTCACCCGTGTTGTTCTTGGCGGAAGTAGCCGAACCTCTTCAAAGTC AGGAGTTTGACTTTATTGACCGCACGGCCCCTGCCGTCTTTGCCGGGATC GGACATCCACTACTTGAGAGCAAAAAACAAAAATTGGAACTTTTACTTAC TTTGAATGTCGATCGTGGCACTCTGAATCCTTCGTCCTCCGAAAGGTGGA GAGAGAAGCAGCTGAACTAGACTGGAGACGGCAGACGGGTCGAACGCTTG CAGGCAGGGAACTGGCGGGCCTCCCGGGGAACGAACGTGGCTACATCTTG GTCAAGGAGGCGTTTGAGGGGGGGTCGGGACGGCTTGGAGGAGAAAGCGA GGGTCTCACGCACGTGGGTGGGCTGGGTCTCTTTTTCATAACGTGATCGA GAAACATGCATCGCCCGATCTTCCCACTAGTCGCGCGAGCACCATCGCTG CGACGACCAAGATAATCAGATGGTTTTGGGTCCTGACGTTTTAAAACTAT ATTTTTAAAGCGAAATCGCGTTTCATGTCAAACCAATGTTTTTGTGATGG CGCGCATGGTTATTGAAAGGGTATATGCTGTACAATATAACCTTGCTTAC TCTGGCCCGAGTTAACCCCAACCCAAAGCCTCGAATGTCCTTGTTGATTG CGCCCCCTCGGTTGCCTTGCTCCAGACGGCCGATCCCTCCCGTGAAACGA CGCGAAATATTCGAGTTAACCGTCAAACCGCCATCGACCGACCGCCACTC TTTCTTTTCGCAGCTCTTCTCGGCGCAACAGCTCGCTGGCCAGGCAGCCG TGCTGCGGCTTACACCAGAAGAGCAGGAGATCGAAGACTGCTGCGGTCAC TCGACGGTCAAGGAAGACTCGGCTGTAGCCGCCTCCGAAGGAACGCACAA GTGTGAGGGCGAGCTAGCGAGTGCGGGTGATACGGCGCGTGGAGTGGAGG AAGAGAAAGACGAGCTGGGCGGGGCCGAGGCGGGGAATCCAGGTGGCGAC AACCCAATGGATACAACTGAGCCGACGGAGATGGTGCTAGAGGAAGCGAC GACGCAAGAGGACATGGCTGCGGAAGTCATAGGTGGGGTCACAGACCCGG TGCGATCGAACGCTGAACGTCGAGGGAGAGCGGGAGGTGCCACGGTCGAA GCGATAGGTGACTCCGCGACCGGCTTCCCAAGCCCGATGGAAGTGACACA GGAGAAGGGCAATGCTCCATTTGCCAACGATCCGCCCGCGCCGCAACAGT TGCTACCGTTGCCCTCGACGGCGCCCGGTTCTCCGCTGGACGAGCTGGTT GCCATGGGGTTCGCGAGGGATGCCGCGGACGAAGCGTTGTACGTATCCGG GGGTTCTGTCGCCGAGGCCGCTTCCCGATTACTGGCGCCGGGGTTGTCAA GCGTCGGAGTCGGGGCCGGGATTAATCCGTCGGACGAGGCCTTCAGCAGC TCAGGCAGGACAGGGATGGGCGAGAGACCACGGCTATCACGCGAGGTCAG GGTACAGCAAGCGACGGAGAAGATTGCTGGGCACAACGACCGTGGTAAAG CTTTGAAGGTGAGGTGATGATTCGGTCGGGTTTTCTCTGATTTTCTTGAA CAGCTTGGTAGGCAGACGATACCCCTGTCCTCGACAGGATCTTATTGTAA GGGTCATTCGGAAACCAAGAAGCAATCCGAGATAACATCCATCAGGCGGT GCTGTCAAAAGAGATGGCGGGAAAGGAGCGACTTGCGGCATTGGAATACC CTGACTCTATAGATTGCCGCCTGGGCTTAAAGCTAAATATTTAGCTAGAG CACTATTTCGGAGTGTTTTTTTCTTTTTTTTTCTTCGCCTACTACAAGCG TGACCGCCTTCCGCGCACGCCTTCTCATCCGCTCCTGACCGTCGCTGCTA CCTCCTCGATCGCCCAGTGCTTGGAAGTTTTGGAGGCGATGCTCCGGAAC ATATTGGAGCATCCAGCAGAGGAGAAATTCCGAAGGGTTCGGCGATCGAA CGGAAAGTTTAAGGTATGGTTGGAGAGGAAGCCTCTTTTAGGACCTGAGA AGGCCTGCGCCGTCTTGTCTCTGCTTTCATGTGATCCTCGATCGAACATG CGTTAGGATCTAGTACGCAGATCACGCCGCACACGCCGTACCCAAACTCC CACTATTAATAGGATCGCCTAACGCAACCAATTCCAAGGTTACGCACTTT TTTCTTTAATCTCACTTATAGCCGATAGACCTCATTGCCATCCTGTCTGT GGTCACTAAAGATCTTCCCATCTCTCCCCGGTTCACGCCTTACAATTTTG TATCGCGATGCAAGTTCAGCAATCTTACAACTCGTCAACCAATGGTCTAA TTTCACTTGTTCACGTTCTCACGCTTTCCGTTACGAAAGAAATAACACAA ATCCTACCTTGGTAAGAATCGAACTCACGACTTTCGCACTAGCAGGTGTG CAGGTTACCTACTAGACCACTCGGGCGACGAGCTTTAATAGTATAATAAG TATTTCGAGTTTCCATGTTTTTTTACGTCTGCGCATGACGCCTACGCATC TTGCCTGCGTATATGATACCTGAGTTCGACGCCCGCGAATACCCCCAAAT CTTACATACGTGAAACCAAGACATTATGGCCATCCTTTCTTCGGTCGGTT CTAAGCATACCTCGGAGGAAGACAGAGGGTATCCCCTGTTTTTCGGCGCG AGTTCATCTTTCATCGCCGTGAAAATGCAGGCGGCCTTGACCCCAAGTCT TGCGGTCCGTTCCTAATGTGCTGGACTGTGTCATTATGTGCCATTTTGTG TCATTGTGTGACAGGCGTCAGTCGGCTCGGTTACGGGAGGCGTGGAGCTT CTCCTGGCAGCAGGCTTTGACGTTCAAGGCACCGACCAGCTAAAGCTAGG CCGACAAGATCCAGGTTTAATCTGGTTGGCCAGGACCACCGTCGAAGGGT GGCGAGAGCGCCTCGCTACCTAAGTGCCCGGGAAAGCGATTGGGCTGTAT TGTCTTGTAGATCGTGGTTTTACCAGTGGCCTGTTTTTTTTCTTCTTTGT CCCGGTCGATACGCTGCGCTGGCTGTGGAGGTTCGGTTGTGTTGGCGCGG GAGCGATGCGAGGAACCCACTGGTGCTATGGCACATCGCTGCCAATTGCT TTTAGCTTGCGTATGCATATTCGTGCGAGACGGGCGAATTACGTCAATAA TTGCGAATTGATCTCGCGTCGGGTGGGTCCATCTCCGCGGAAGGCAAGTC TTCCGAATATGCCATATGCGTCCCACAGCTGATGGCGAAATTACTCGAGC TTTTTTGCGACGCTCGTATGCAGCACGGTTCGTAAGATCGCTGTCACCCT TGCTTCGGCGATACCGTGCCCTGCTTCTCTGTACCGTGGTTTCGATTTTT TTTGGCATTTGGTCAGAGGAGGGAGGCCAGGAGGCAGGCACGCAGGACTT GATCGTAGTGCAGGATATTGCTACACGAAAGTAGCTCAGATTGTGAAGGT GCGGGTGGGTCCAATAGCCAAATATGTAGTTGAGACGCAATCGTTTGTTG CCGGTTGAGAAGAACCGAGGGGATTATGTATTGCAGGCCATAGTAGTGCG CGAAAGCCCCAGGGCTCTTGCCAGTCTCTTGTACTATTAATAAAGGCTGG CGCCCTTTTCGTGGGGGGGTACTTGTACCTTTTTTAACTGGCCTATTGCC AATTTCCCTTTTGTACCATACTTGTGAGTGTAGACTATCCAAAAGCTATT GTGTAGAAGATGTACTCGTTCTGGTGCCTGAGTCCCGAGAGAGTCACCGA GTATGGACGTCAGTGTTTCGTAGAGTGTGAATACGGGGAAGTCTCGTTCC TTGAGAGGTATATAACAAATACCTGGCAACAAGAAGCAATGTGTTTACAC CTAAGGAGCGGAGCTGTAGATTTAGCCCCGCGTTTGGTGGTAATCGGTGG CGTACTCACTCTACGTTACTATTAATACCTTACTACGGCACCCCATAGTT CCACGCCGTCCGCAAGTGCCGCAGTAATTGGCAGAGCTCTCGACGCTCTC GCAATACTGATGCCGTATATTTTTCCTTACGACAACATTCAGACAAGGAA TAGACGGCCCACACTTGTTTTGTATGTTTTCTAGAGCAGCACGAAAAATA CTGGATTCGATTTTCAAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1170:231843..240460-

>mRNA_F-serratus_M_contig1170.1410.1 ID=mRNA_F-serratus_M_contig1170.1410.1|Name=mRNA_F-serratus_M_contig1170.1410.1|organism=Fucus serratus male|type=CDS|length=3942bp|location=Sequence derived from alignment at F-serratus_M_contig1170:231843..240460- (Fucus serratus male)
ATGGAAGTTCAAGTCGCATACCGTGGCAAGACCCTGGAGGTCGAGGGACT
GGAAAACACGACGCCTGTCGGTCTTCTGAAGAAAAGGCTGGAAGAGTTGA
CCAAAGTGCCTGTTGCAAATCAAAAGCTGATGGAAGTTCAAGTCGCATAC
CGTGGCAAGACCCTGGAGGTCGAGGGACTGGAAAACACGACGCCTGTCGG
TCTTCTGAAGAAAAGGCTGGAAGAGTTGACCAAAGTGCCTGTTGCAAATC
AAAAGCTGATTTTCAAGGGGAAAACGTTACCAAGTGATGACGACTCCTTG
GAAGTTGCCGGCATCGTCTCGAAGGCGAAGTCCGCACGGGGGGCATCGGG
GGAGGCAAAGTTTACGCAGGAGAAGCGTCTGATGCTGGTTGGGAGCACGG
CTTCCGAGGTGCAAGTGGTGCACAAGCTCAGGGAGGACGCGGTCGTCCGC
AACGACCTCGAAGGAGTGGCCATTCCCAAGGGCTACAAGAAAGTCGCGCT
CAACATCCCGTCCGGTCCCCCGGCCCATTCTCCGTACAGATTTTCAAGGG
GAAAACGTTACCAAGTGATGACGACTCCTTGGAAGTTGCCGGCATCGTCT
CGAAGGCGAAGTCCGCACGGGGGGCATCGGGGGAGGCAAAGTTTACGCAG
GAGAAGCGTCTGATGCTGGTTGGGAGCACGGCTTCCGAGGTGCAAGTGGT
GCACAAGCTCAGGGAGGACGCGGTCGTCCGCAACGACCTCGAAGGAGTGG
CCATTCCCAAGGGCTACAAGAAAGTCGCGCTCAACATCCCGTCCGGTCCC
CCGGCCCATTCTCCGTACAGGTTCGAGGGTATAGAAACCCTTCCAGGATT
ACCGAACGAAGACCGGGCCAGAGAAATTCTGGAGTCTTTGGCGGACGACC
CGGGCGTGCGATCGGTGCTGGAGAAGCACAAGTGGACCGTAGGCGCACTT
TGTGAGCTCTATCCCGAGGGAAAGGTTCGAGGGTATAGAAACCCTTCCAG
GATTACCGAACGAAGACCGGGCCAGAGAAATTCTGGAGTCTTTGGCGGAC
GACCCGGGCGTGCGATCGGTGCTGGAGAAGCACAAGTGGACCGTAGGCGC
ACTTTGTGAGCTCTATCCCGAGGGAAAGGTGGGCATTAGCGCCACGTGTG
TGATGGGACTCAACGTAAACCACGGGGAGAAGATTCGGTTACGGCTTCGA
ACGGACGATCTCAAAGGGTTTCGGAAGGTGGGCATTAGCGCCACGTGTGT
GATGGGACTCAACGTAAACCACGGGGAGAAGATTCGGTTACGGCTTCGAA
CGGACGATCTCAAAGGGTTTCGGAAGATCCTGTCCATCCGGAAGGTACTC
TTCCACGAGCTGGCCCACAACGAATTTAGCGAACACGACGACAATTTTTA
CCAGCTCATGCGACAGATCCTGTCCATCCGGAAGGTACTCTTCCACGAGC
TGGCCCACAACGAATTTAGCGAACACGACGACAATTTTTACCAGCTCATG
CGACAGGTGGAGAGAGAAGCAGCTGAACTAGACTGGAGACGGCAGACGGG
TCGAACGCTTGCAGGCAGGGAACTGGCGGGCCTCCCGGGGAACGAACGTG
GCTACATCTTGGTCAAGGAGGCGTTTGAGGGGGGGTCGGGACGGCTTGGA
GGAGAAAGCGAGGGTCTCACGCACGTGGAGAGAGAAGCAGCTGAACTAGA
CTGGAGACGGCAGACGGGTCGAACGCTTGCAGGCAGGGAACTGGCGGGCC
TCCCGGGGAACGAACGTGGCTACATCTTGGTCAAGGAGGCGTTTGAGGGG
GGGTCGGGACGGCTTGGAGGAGAAAGCGAGGGTCTCACGCACCTCTTCTC
GGCGCAACAGCTCGCTGGCCAGGCAGCCGTGCTGCGGCTTACACCAGAAG
AGCAGGAGATCGAAGACTGCTGCGGTCACTCGACGGTCAAGGAAGACTCG
GCTGTAGCCGCCTCCGAAGGAACGCACAAGTGTGAGGGCGAGCTAGCGAG
TGCGGGTGATACGGCGCGTGGAGTGGAGGAAGAGAAAGACGAGCTGGGCG
GGGCCGAGGCGGGGAATCCAGGTGGCGACAACCCAATGGATACAACTGAG
CCGACGGAGATGGTGCTAGAGGAAGCGACGACGCAAGAGGACATGGCTGC
GGAAGTCATAGGTGGGGTCACAGACCCGGTGCGATCGAACGCTGAACGTC
GAGGGAGAGCGGGAGGTGCCACGGTCGAAGCGATAGGTGACTCCGCGACC
GGCTTCCCAAGCCCGATGGAAGTGACACAGGAGAAGGGCAATGCTCCATT
TGCCAACGATCCGCCCGCGCCGCAACAGTTGCTACCGTTGCCCTCGACGG
CGCCCGGTTCTCCGCTGGACGAGCTGGTTGCCATGGGGTTCGCGAGGGAT
GCCGCGGACGAAGCGTTGTACGTATCCGGGGGTTCTGTCGCCGAGGCCGC
TTCCCGATTACTGGCGCCGGGGTTGTCAAGCGTCGGAGTCGGGGCCGGGA
TTAATCCGTCGGACGAGGCCTTCAGCAGCTCAGGCAGGACAGGGATGGGC
GAGAGACCACGGCTATCACGCGAGGTCAGGGTACAGCAAGCGACGGAGAA
GATTGCTGGGCACAACGACCGTGGTAAAGCTTTGAAGCTCTTCTCGGCGC
AACAGCTCGCTGGCCAGGCAGCCGTGCTGCGGCTTACACCAGAAGAGCAG
GAGATCGAAGACTGCTGCGGTCACTCGACGGTCAAGGAAGACTCGGCTGT
AGCCGCCTCCGAAGGAACGCACAAGTGTGAGGGCGAGCTAGCGAGTGCGG
GTGATACGGCGCGTGGAGTGGAGGAAGAGAAAGACGAGCTGGGCGGGGCC
GAGGCGGGGAATCCAGGTGGCGACAACCCAATGGATACAACTGAGCCGAC
GGAGATGGTGCTAGAGGAAGCGACGACGCAAGAGGACATGGCTGCGGAAG
TCATAGGTGGGGTCACAGACCCGGTGCGATCGAACGCTGAACGTCGAGGG
AGAGCGGGAGGTGCCACGGTCGAAGCGATAGGTGACTCCGCGACCGGCTT
CCCAAGCCCGATGGAAGTGACACAGGAGAAGGGCAATGCTCCATTTGCCA
ACGATCCGCCCGCGCCGCAACAGTTGCTACCGTTGCCCTCGACGGCGCCC
GGTTCTCCGCTGGACGAGCTGGTTGCCATGGGGTTCGCGAGGGATGCCGC
GGACGAAGCGTTGTACGTATCCGGGGGTTCTGTCGCCGAGGCCGCTTCCC
GATTACTGGCGCCGGGGTTGTCAAGCGTCGGAGTCGGGGCCGGGATTAAT
CCGTCGGACGAGGCCTTCAGCAGCTCAGGCAGGACAGGGATGGGCGAGAG
ACCACGGCTATCACGCGAGGTCAGGGTACAGCAAGCGACGGAGAAGATTG
CTGGGCACAACGACCGTGGTAAAGCTTTGAAGTGCTTGGAAGTTTTGGAG
GCGATGCTCCGGAACATATTGGAGCATCCAGCAGAGGAGAAATTCCGAAG
GGTTCGGCGATCGAACGGAAAGTTTAAGTGCTTGGAAGTTTTGGAGGCGA
TGCTCCGGAACATATTGGAGCATCCAGCAGAGGAGAAATTCCGAAGGGTT
CGGCGATCGAACGGAAAGTTTAAGGCGTCAGTCGGCTCGGTTACGGGAGG
CGTGGAGCTTCTCCTGGCAGCAGGCTTTGACGTTCAAGGCACCGACCAGC
TAAAGCTAGGCCGACAAGATCCAGGTTTAATCTGGTTGGCCAGGACCACC
GTCGAAGGGTGGCGAGAGCGCCTCGCTACCTAAGCGTCAGTCGGCTCGGT
TACGGGAGGCGTGGAGCTTCTCCTGGCAGCAGGCTTTGACGTTCAAGGCA
CCGACCAGCTAAAGCTAGGCCGACAAGATCCAGGTTTAATCTGGTTGGCC
AGGACCACCGTCGAAGGGTGGCGAGAGCGCCTCGCTACCTAA
back to top