mRNA_F-serratus_M_contig1160.1340.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A836CQJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQJ0_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.600e-33 Identity = 79/176 (44.89%), Postives = 99/176 (56.25%), Query Frame = 1
Query: 67 IDQELEGAPWLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGR-----VLVAVAKVLGCR------GIGVDVSQACVDSARGMSGAEGVSDLLTFHCADAT---RPEAFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGGARVFTVQYHVSGEAWEASAACGDDPSTRLY 552
++Q +EG PWLSPFLP+ + + DD+++DIGCGDGR L A G+GVDVS CV +ARGM+ AEGV+DLL +H D T E E+ G TVV+LYVYPTLL +L ++ RL GA V TVQYH G W A AA PS RL+
Sbjct: 1 MEQAIEGKPWLSPFLPTCAADIVAFLDFAAVTADDIIVDIGCGDGRHCQGLTLPAPPAAXXXXDDTASGGVGVDVSDECVATARGMAEAEGVADLLQWHATDITGQGHDEVLEQNG--PPTVVYLYVYPTLLTQLRPVVRRLCERGAHVVTVQYHFDG--WRARAARDGPPSMRLH 172
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A7S4D9T4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T4_HETAK) HSP 1 Score: 124 bits (310), Expect = 2.150e-31 Identity = 74/173 (42.77%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 40 LEEDHLGQSIDQELEGAPWLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADATRPE---AFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGGARVFTVQYHVSGEAWEASAACGDDPSTRL 549
LEE H I+ ELEG LSPFLP+ + +GL+ DV+LDIGCGDGRVL++ AK +GC+ IGVD+++ C++ A+ ++ EGV + F C DAT + A EE L TV++LYVYPTLL+RLE ++ RV T YH+ ++ S D S++L
Sbjct: 99 LEEFHFDYMIESELEGNRILSPFLPTKAGDIDAFFQFSGLIHSDVLLDIGCGDGRVLISAAKTIGCQCIGVDITKECIELAKSIAKIEGVESQVQFLCVDATTNDFQNALEE-NLGEITVLYLYVYPTLLKRLEGVVSYFLARNVRVITQTYHLDCCSFSQSKV---DESSKL 267
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: B7FSM9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSM9_PHATC) HSP 1 Score: 102 bits (254), Expect = 2.470e-23 Identity = 60/140 (42.86%), Postives = 82/140 (58.57%), Query Frame = 1
Query: 97 LSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADAT------RPEAFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGG-ARVFTVQYHVS 495
LSP++P++ + L+ DV+LDIGCGDGR+ V+ A++ GCR +G+DVS C+ AR ++ E + D L+F ADAT E L TV+FLY YPTLL RL LL + G ARV T+ YH+S
Sbjct: 85 LSPYVPTTAAKIAKFVEFASLLESDVLLDIGCGDGRICVSAARLSGCRAVGIDVSPLCIAMARELAREENLEDRLSFFEADATIDPKRLLQSPLLESDLKDVTVIFLYTYPTLLGRLFPLLAKFTENGKARVVTLTYHLS 224
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A7S1TS12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS12_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.940e-23 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 1
Query: 85 GAPWLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMS-------GAEGVSDLLTFHCADATRPEAFEELGLAAATVVFLYVYPTLLERLETLL--MRLRRGGA--RVFTVQYHV 492
GA LSPFLP+ P L + G+ DV+LDIGCGDGRV +AVA V C +G+D+S+ C+D+AR GA+ + +T+ AD + E + AATV++LYVYPTL+E+LE L+ M L G A RV TV+YH+
Sbjct: 101 GAAMLSPFLPTRPGDLVDFLRIGGVGASDVLLDIGCGDGRVALAVAAVRHCAVVGLDISKLCIDAARSAEAALTVKLGADAFAAGVTWLHADFLKEEVRALESVRAATVLYLYVYPTLIEKLEPLVRDMLLNDGFALARVVTVEYHL 247
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: W7TQE1_9STRA (Rna methylase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.160e-19 Identity = 71/181 (39.23%), Postives = 94/181 (51.93%), Query Frame = 1
Query: 28 KTEILEEDHLGQSIDQELEGAP--WLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSD---------LLTFHCADATR-PEAFEELGLAAA---------TVVFLYVYPTLLERLETLLMRLRRGG-----ARVFTVQYHV 492
+TE LE+ HL ID+ LSPFLP++ + L + + L +++D+GCGDGR L+A A + CRG+GVD+SQ C+ A+ + EG+SD LL+ A R EA E AA VVFLYVYPTLL RL LL RL R V T+ YH+
Sbjct: 25 ETEALEDSHLDSCIDEAAIQVQRHTLSPFLPTAAEDLASIFNILRLGPRHIMVDLGCGDGRPLIAAALLCKCRGVGVDISQQCIALAKSIVSQEGLSDRMVAFFRWDLLSDQEAVLNRLVEAVEAKAQEAAIECKDGVEAVVVFLYVYPTLLARLVCLLDRLVRAWRDFRRVEVVTLTYHL 205
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A3N5TMI1_9BACT (Methyltransferase domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A3N5TMI1_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 3.170e-19 Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 79 LEGAPWLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADATRPEAFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGGARVFTVQYHVSG 498
LE A L+PF+P+ P+ + + + DDVV D+GCGDGR+++A A+ GCR +G+++ A ++ + + EGV+ L+ F DAT+ L ATV+ LY+ P LE L R R GAR+ + Y + G
Sbjct: 130 LEDAADLAPFVPTPPEVVERMLEIAAVGPDDVVYDLGCGDGRMVIAAARTRGCRAVGIELDAALIEECKAAAEREGVTKLVRFLRLDATKA------SLTEATVLALYLLPESLETLSPAFERDLRAGARIVSHDYKIPG 263
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A7S2R6G4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6G4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.960e-19 Identity = 68/186 (36.56%), Postives = 89/186 (47.85%), Query Frame = 1
Query: 22 RFKTEILEEDHLGQSIDQELE-----GAPWLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVS-----DLLTFHCADAT--RPEAFEELGLAAATVVFLYVYPTLLERLETLLMRL-RRGGARVFTVQYHVSGEAWEASAACGDDPS 540
R TE LE+ HL ++D L+ G LSPFLPS P + + DV+LD+GCGDGRVL ++ GCRG+GVDVS C+D+A M E + L F D R + TV +LY+YPTLL+ + L L R R+ T YH + W A D S
Sbjct: 19 RHDTEKLEQVHLDWTLDVSLDEDAVDGPQVLSPFLPSQPPAIEALLQLLPWSPGDVLLDVGCGDGRVLTSMTLAKGCRGVGVDVSPDCIDAANAMWDEEAARTSKDRESLAFVLGDCVVDRKLLPRLTDVHHVTVCYLYIYPTLLKSIRPDLEDLSRERQVRIVTAGYHF--DDWPVERAVSYDGS 202
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A7C3KE54_9CYAN (Class I SAM-dependent methyltransferase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KE54_9CYAN) HSP 1 Score: 86.7 bits (213), Expect = 3.380e-18 Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 1
Query: 106 FLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADATRPEAFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGGARVFTVQYHVSGEAWEASAAC-GDDPSTRLY 552
F+P+ P ++ + + DVV D+GCGDGR+++A A GCRG+G+D+ +++AR + + V+D L F+ AD E AATVV LY+ P L RL L + + GAR+ + + + E S C DD LY
Sbjct: 10 FIPTPPAMVKAMLDLAEVQASDVVYDLGCGDGRIVIAAATQFGCRGVGIDIDPVRIETARTTAATKHVADQLQFYVAD------LYETDFRAATVVILYLLPHLNLRLLPQLRQQLQPGARIISRDFDMGDWQPERSLICTADDEEATLY 153
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A7S2SPV3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPV3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 4.570e-18 Identity = 54/141 (38.30%), Postives = 77/141 (54.61%), Query Frame = 1
Query: 94 WLSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADATRPEAFEELGLAAATVVFLYVYPTLLERLETLLMRL--RRGGARVFTVQYHVSGEAWE 510
W+ P+ PS ++ T + DV+LD+GCGDGRVL V GC GIG+DVS CV+ AR +S AEG F AD E +L A T++++Y+ P L ++E L+ +L + RV+T +YH WE
Sbjct: 83 WVCPWQPSDINSIDAFTKFAKVSHHDVLLDLGCGDGRVLTRVCSQTGCNGIGIDVSLECVNLARHISEAEGQGGRARFVVADFCNCETLPDLS--AVTLIYIYLVPKALVQVEPLVKQLCAQHKSMRVYTYEYHFKD--WE 219
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Match: A0A1F5BFE3_9BACT (Methyltransf_25 domain-containing protein n=2 Tax=unclassified Aminicenantes TaxID=910038 RepID=A0A1F5BFE3_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.950e-16 Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 97 LSPFLPSSPQTLRTATFVTGLVLDDVVLDIGCGDGRVLVAVAKVLGCRGIGVDVSQACVDSARGMSGAEGVSDLLTFHCADATRPEAFEELGLAAATVVFLYVYPTLLERLETLLMRLRRGGARVFTVQYHVSG 498
L+PF+P+ + + + +DVV D+GCGDGR+++ AK RG+G+D+ A ++ R + EGV L+ F DAT+ L ATV+ LY+ P LE LE R R G R+ + Y + G
Sbjct: 14 LAPFVPTPRPVVERMLEIAAVGPEDVVYDVGCGDGRMVITAAKTFRARGVGIDIDAALIEECRAGAKREGVEKLVRFLLMDATKAR------LTGATVLALYLLPESLETLEPAFERDLRPGVRIVSHDYMIPG 141 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1160.1340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1160.1340.1 >prot_F-serratus_M_contig1160.1340.1 ID=prot_F-serratus_M_contig1160.1340.1|Name=mRNA_F-serratus_M_contig1160.1340.1|organism=Fucus serratus male|type=polypeptide|length=189bp YVVSLHERFKTEILEEDHLGQSIDQELEGAPWLSPFLPSSPQTLRTATFVback to top mRNA from alignment at F-serratus_M_contig1160:231778..233678- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1160.1340.1 ID=mRNA_F-serratus_M_contig1160.1340.1|Name=mRNA_F-serratus_M_contig1160.1340.1|organism=Fucus serratus male|type=mRNA|length=1901bp|location=Sequence derived from alignment at F-serratus_M_contig1160:231778..233678- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1160:231778..233678- >mRNA_F-serratus_M_contig1160.1340.1 ID=mRNA_F-serratus_M_contig1160.1340.1|Name=mRNA_F-serratus_M_contig1160.1340.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig1160:231778..233678- (Fucus serratus male)back to top |