mRNA_F-serratus_M_contig1160.1338.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: D7G1B1_ECTSI (Calmodulin-like myosin-light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B1_ECTSI) HSP 1 Score: 309 bits (792), Expect = 2.410e-93 Identity = 150/233 (64.38%), Postives = 193/233 (82.83%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIADGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
R+YPG ISR+ R+G+ DIDYDDGEKE++V+ SL++++E G+ R+ RL+EGMKV+A+YKGR+RYY G+ISRIH DGSCDIDYDDGEKER+V+PSL++ +E K E D L EGM+VEA+Y+GRSRYYPGRISRV+RDG CDIDYDDGE+ER+V+ LVRVLE + +G+ L+EGM+VEA+Y+GRSRYYPGRISR++RDG CDI+YDDGE+E +V+PSLVR
Sbjct: 77 RYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRALESGKGERTGGRD-RLEEGMKVEAKYKGRSRYYPGRISRIHRDGSCDIDYDDGEKERLVDPSLVRALESGKGERTGSGD-HLEEGMRVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESSKGERTGSG-DRLEEGMRVEAKYKGRSRYYPGRISRIHRDGSCDIDYDDGEKERLVDPSLVR 306
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A6H5KJS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS9_9PHAE) HSP 1 Score: 307 bits (787), Expect = 1.070e-92 Identity = 149/233 (63.95%), Postives = 188/233 (80.69%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIADGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
R+YPG ISR+ R+G+ DIDYDDGEKE++V+ SL++ +E G+ E RL+EGMKV+A+YKGR+RYY G+ISR+H DGSCDIDYDDGEKER+V+PSL++ +E K + + L EGMKVEA+Y+GRSRYYPGRISRV+RDG CDIDYDDGE+ER+V+ LVRVLE + L+EGMKVEA+Y+GRSRYYPGRISRV+RDG CDI+YDDGE+E +V+PSLVR
Sbjct: 1000 RYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVRVLESGKGGERTGSGDRLEEGMKVEAKYKGRSRYYPGRISRVHRDGSCDIDYDDGEKERLVDPSLVR 1232
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A7S4D6I5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6I5_HETAK) HSP 1 Score: 225 bits (573), Expect = 2.140e-69 Identity = 125/251 (49.80%), Postives = 161/251 (64.14%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVE-------RGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIA-----DGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTT------PSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
++YPG ISR+R +GT+DIDYDDGE+E VEA LIK +G+SS+ E G + G KV+ARY+G+ +YY GKISR+ DG+ DIDYDDGE+E VE LIKG R G+ G KVEARYRG+ +YYPG+I+RV DG DIDYDDGEQE VE+ L++ G+G T + G KVEARYRG+ +YYPG+ISRV+ DG D++YDDGE+E VE L++
Sbjct: 27 KYYPGKISRVRSDGTYDIDYDDGEQETRVEAKLIKGTSNEGKGGAKGKSSDAE---GGFEVGEKVEARYRGKLKYYPGKISRVRSDGTYDIDYDDGEQETRVEAKLIKGTSGGGRGGAKAGIDTDGGGAFEVGDKVEARYRGKLKYYPGKITRVRSDGTYDIDYDDGEQETRVEARLIK--------GTGGTGKGGDHDGAFAVGEKVEARYRGKLKYYPGKISRVHSDGTYDVDYDDGEQETRVEAKLIK 266
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A7S3XTI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTI2_HETAK) HSP 1 Score: 226 bits (575), Expect = 4.060e-69 Identity = 123/244 (50.41%), Postives = 160/244 (65.57%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIA-----DGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTT------PSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
++YPG ISR+R +GT+DIDYDDGE+E V A LIKS + G + + +G + G KV+ARY+G+T+YY GKISR+ DG+ DIDYDDGE+E VE LIKG R G+ G KVEARYRG+ +YYPG+I+RV DG DIDYDDGEQE VE+ L++ G+G T + G KVEARYRG+ +YYPG+ISRV+ DG D++YDDGE+E VE L++
Sbjct: 46 KYYPGKISRVRSDGTYDIDYDDGEQETRVSAELIKSKDGGGGGKGD--DGSFKVGDKVEARYRGKTKYYPGKISRVRSDGTYDIDYDDGEQETRVEAKLIKGTSGGGRGGAKAGIDTDGGGAFEVGDKVEARYRGKLKYYPGKITRVRSDGTYDIDYDDGEQETRVEARLIK--------GTGGTGKGGDHDGAFAVGEKVEARYRGKLKYYPGKISRVHSDGTYDVDYDDGEQETRVEAKLIK 279
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A7S1XMB3_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMB3_9STRA) HSP 1 Score: 221 bits (564), Expect = 8.330e-69 Identity = 123/250 (49.20%), Postives = 165/250 (66.00%), Query Frame = 1
Query: 19 ISRLRRNGTFDIDYDDGEKEQMVEASLIKSVE--RGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSI---------ADGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEIND------------GSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
I+R R+GT+DIDYDDGEKE+ V+ +IKS+E R + G L+EG V+ARY+GR+RY+ GK++R+H DG+ DIDYDDGEKER V+ +IK +E ++ G LREG KVEARYRGRSRY+PG+I+R RDG D+DYDDGE+ER V+ +++ LE + G G L+EG KVEARYRGRSRY+PG+I+R RDG DI+YDDGE+E V+ +++
Sbjct: 2 IARDNRDGTYDIDYDDGEKERGVQEDMIKSLESRRDDRDYRGGGGGGLREGDMVEARYRGRSRYFPGKVARVHRDGTYDIDYDDGEKERGVKEDMIKSLESRRSXXXXXXXXXXXXXXGGGGLREGDKVEARYRGRSRYFPGKIARDNRDGTYDVDYDDGEKERGVKEDMIKSLESRRSPXXXXXXXXXXXRGGG---GGLREGDKVEARYRGRSRYFPGKIARDNRDGTYDIDYDDGEKERGVKEDMIK 248
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A7S3XTI8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTI8_HETAK) HSP 1 Score: 226 bits (575), Expect = 2.560e-67 Identity = 123/244 (50.41%), Postives = 160/244 (65.57%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIA-----DGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTT------PSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
++YPG ISR+R +GT+DIDYDDGE+E V A LIKS + G + + +G + G KV+ARY+G+T+YY GKISR+ DG+ DIDYDDGE+E VE LIKG R G+ G KVEARYRG+ +YYPG+I+RV DG DIDYDDGEQE VE+ L++ G+G T + G KVEARYRG+ +YYPG+ISRV+ DG D++YDDGE+E VE L++
Sbjct: 46 KYYPGKISRVRSDGTYDIDYDDGEQETRVSAELIKSKDGGGGGKGD--DGSFKVGDKVEARYRGKTKYYPGKISRVRSDGTYDIDYDDGEQETRVEAKLIKGTSGGGRGGAKAGIDTDGGGAFEVGDKVEARYRGKLKYYPGKITRVRSDGTYDIDYDDGEQETRVEARLIK--------GTGGTGKGGDHDGAFAVGEKVEARYRGKLKYYPGKISRVHSDGTYDVDYDDGEQETRVEAKLIK 279
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: F0YS74_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YS74_AURAN) HSP 1 Score: 227 bits (578), Expect = 3.650e-67 Identity = 127/233 (54.51%), Postives = 154/233 (66.09%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIADGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEINDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
++YPG I+R R +GTFDI YDDGE+E VE LI+S + G SS + +L+EG KV+ARY+GR +YY G+I R DG+ DI YDDGEKE VE LI+ KK G LREG KVEARYRGR +YYPG+I+R DG DIDYDDGE+E VE L+R DG L+EG KVEARYRGR +YYPG+I+R DG DI+YDDGERE VE L+R
Sbjct: 191 KYYPGKITRDRGDGTFDIAYDDGERETRVEERLIRSKDGGGSSGGD----KLREGEKVEARYRGREKYYPGRIERDRGDGTYDIYYDDGEKETRVEERLIR----KKDAGGGSGGGKLREGDKVEARYRGREKYYPGKITRDRGDGTFDIDYDDGERETRVEERLIRA-----KDGXXXXXXXLREGAKVEARYRGREKYYPGKITRDRGDGTFDIDYDDGERETRVEERLIR 410
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A835ZKM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM7_9STRA) HSP 1 Score: 234 bits (596), Expect = 4.590e-67 Identity = 131/252 (51.98%), Postives = 169/252 (67.06%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVE----RGESSEVEPR------EGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIADGS---LREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKE------INDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
R+YPG I R R+GT+D+DYDDGEKE V A LIKS+E RGES R L EG KV+ARYKGR RYY GK+ R + DG+ D+DYDDGEKE V LI+ +E +R I S LREG KVEARY+GR+R+YPG+I RV RDG D+DYDDGE+E + + L++ LE + +NDG+ ++L+EG KVEARY+GR+R++PG+I RV RDG D++YDDGE+E V L+R
Sbjct: 656 RYYPGKIQRANRDGTYDVDYDDGEKELSVAADLIKSLEPPPRRGESVNEGLRVSSSAAAAALIEGDKVEARYKGRARYYPGKLRRANRDGTYDVDYDDGEKELSVAAELIRSLEPPRRSPARIDSSSALPLREGDKVEARYKGRARHYPGKIRRVNRDGTYDVDYDDGEKELSMAADLIKSLEADARRTESVNDGAQGA-AALREGDKVEARYKGRARFFPGKIRRVNRDGTYDVDYDDGEKELSVAADLIR 906
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A1V9YSA0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YSA0_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.600e-63 Identity = 109/238 (45.80%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVEEKKREAFSIADGSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEK-----EINDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
+ YPGTI+++ NGT+DIDYDDGEKE V LI+ SE P + RL+ G KV+A+YKG+T +Y GKI+++H DG+CD+DYDDGE E V+ ++ A + AD + G KVEA+YRG++ +YPG+I++++ DG CD+DYDDGE+E+ ++ L+RVL+ + G+ L G KVEA+Y+GR+ +YPG+I++V+ +G DI+YDDGE+E V LVR
Sbjct: 96 KLYPGTIAKVHSNGTYDIDYDDGEKETNVAKELIRG------SEGSPPKVRLKIGAKVEAKYKGKT-FYPGKIAKVHSDGTCDVDYDDGEVELRVKSDWVR--------AIASADSDIEVGTKVEAKYRGKT-FYPGKIAKIHSDGTCDVDYDDGEKEKKIKRELIRVLDAKKTSTDTKPGTADPDCDLDVGTKVEAKYKGRT-FYPGKIAKVHSNGTYDIDYDDGEKEKKVHKDLVR 316
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Match: A0A2D4CK69_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK69_PYTIN) HSP 1 Score: 212 bits (540), Expect = 1.950e-63 Identity = 121/254 (47.64%), Postives = 167/254 (65.75%), Query Frame = 1
Query: 1 RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERG--------ESSEVEPREGRLQEGMKVDARYKGRTRYYAGKISRIHPDGSCDIDYDDGEKERMVEPSLIKGVE----EKKREAFSIAD-----GSLREGMKVEARYRGRSRYYPGRISRVYRDGKCDIDYDDGEQERMVESILVRVLEKEI----NDGSGTTPSSLKEGMKVEARYRGRSRYYPGRISRVYRDGRCDINYDDGEREHMVEPSLVR 699
+FYPG ISR R NGT+DIDYDDGEKE V A LI+S E ++SE E R + +EG KV+A+YKGR+++Y G ISR +G+ DIDYDDGEKE V LI+ E KK++A +++ G+ +EG +VE +Y+G+S+YYPG +SR +G DI+YDDGE+E V + L+R LEK+ +D G T +EG K+EA+Y+G+S++YPG ISR +G DI+YDDGE+E V L+R
Sbjct: 38 KFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRSRESSSPSKKKTIDTSEDETRNKKFREGEKVEAQYKGRSKFYPGIISRCRLNGTYDIDYDDGEKETGVAAELIRSREASSPSKKKKADDVSEDDRKAGTFKEGERVEVQYKGKSKYYPGVVSRCRLNGTYDINYDDGEKETGVSADLIRSLEKKATSSDDDRGGKT--KFREGEKIEAQYKGKSKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIR 289 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1160.1338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1160.1338.1 >prot_F-serratus_M_contig1160.1338.1 ID=prot_F-serratus_M_contig1160.1338.1|Name=mRNA_F-serratus_M_contig1160.1338.1|organism=Fucus serratus male|type=polypeptide|length=233bp RFYPGTISRLRRNGTFDIDYDDGEKEQMVEASLIKSVERGESSEVEPREGback to top mRNA from alignment at F-serratus_M_contig1160:216490..217188- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1160.1338.1 ID=mRNA_F-serratus_M_contig1160.1338.1|Name=mRNA_F-serratus_M_contig1160.1338.1|organism=Fucus serratus male|type=mRNA|length=699bp|location=Sequence derived from alignment at F-serratus_M_contig1160:216490..217188- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1160:216490..217188- >mRNA_F-serratus_M_contig1160.1338.1 ID=mRNA_F-serratus_M_contig1160.1338.1|Name=mRNA_F-serratus_M_contig1160.1338.1|organism=Fucus serratus male|type=CDS|length=1398bp|location=Sequence derived from alignment at F-serratus_M_contig1160:216490..217188- (Fucus serratus male)back to top |