mRNA_F-serratus_M_contig116.1328.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A6H5LEQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEQ8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 1.300e-78 Identity = 133/262 (50.76%), Postives = 177/262 (67.56%), Query Frame = 3
Query: 108 GRQMLWLLNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINIAIK-SDSVSSGTAAVILTVVAASVAAVVAAIHFHDQVYLLAIAWAVFAIASREDYRIKTLGAPEADGVTRALEVLYIALLCIGGLSAISDVRQRRR 890
G +MLWL+N+ AYLIN VVV + G + AE+S + T VTP GWAFSIWGVIF FE +FV+W A NR SR+V EGV +F ACL QAAW I F E ++ S L+C I LSL + V+ L+ + ++ F++PFW V+FPIGLHGGWTLAA++VNIN+A++ S AA+IL++V A++ A ++ FH+Q YLLA+AWA+ IAS++DYR LG +DGV AL+ L+I LLCIG L + VRQ R
Sbjct: 8 GSRMLWLVNVLAYLINAVVVGGSNFGWWGATNAEVSDDNPTFVTPNGWAFSIWGVIFFFEAVFVIWGAFRSNRDSRVVQEGVGCWFAIACLIQAAWSIVFAQELLIVSAILLCLITLSLTLAVISLSLIQCEEGITLFTLPFWGVYFPIGLHGGWTLAAAIVNINVALELRGDTGSELAALILSLVGAALGAAFISLVFHNQPYLLAVAWAIAGIASKQDYRFVQLGKDLSDGVNVALQGLWIGLLCIGVLGILVGVRQMNR 269
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S3UTX0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTX0_HETAK) HSP 1 Score: 156 bits (394), Expect = 8.090e-41 Identity = 97/270 (35.93%), Postives = 156/270 (57.78%), Query Frame = 3
Query: 132 NIAAYLINLVVVNWGVELFG-GKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINIAIKSDSVS-SGTAAVILTVVAASVAAVVAAIHFHDQV-YLLAIAWAVFAIASREDYRIKTLGAPEADGVTRALEVLYIA---LLCIGGLSAI----SDVRQRRRNAIQAQN 911
N+ A+++N + +G FG GKSI E+S EY+T++TP GWAFSIWGVIF E +F W L ++ + I+NE V +++++ACLFQ+AW++ + + S ++ GIA+SLA++ +R+TP + Q ++ V F GLHGGWT A+L++ N+A ++ VS G V + +A VAA + F D + Y LAI WA+F I+S + LG A+ + + V ++ L C+ + D + R+N I ++N
Sbjct: 21 NVLAFILN-CSLTFGNNGFGYGKSIEEISDEYQTIITPPGWAFSIWGVIFALEFVFTAWQ-LFQSSDNLILNEVVGFFWVSACLFQSAWNLTIAAQLFVVSALVLAGIAISLAIICLRITPKEMNQHET--VAEYFLVRFSFGLHGGWTCVATLLSFNLAAVANGVSPKGQLVVAIISLAVVVAASLYFGMFKDNLSYSLAICWALFGISSEQGQTSMILGPEIANHIRISSMVCAVSITLLTCVCEFIRVRKVHKDTDEHRKNLISSRN 286
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S2V2F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2F8_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.430e-35 Identity = 96/255 (37.65%), Postives = 144/255 (56.47%), Query Frame = 3
Query: 117 MLWLLNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFS-IWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVP-FWTVHFPIGLHGGWTLAASLVNINIAIKSDSVSSGTAAVILTVVAASVAAV---VAAIHFHDQVYLLAIAWAVFAIASREDYRIKTLGAPEADGVTRALEVLYIALLCIGGLSAI 866
+L +N+ A+ N+V+ + G KS E+S +Y T++TPAGWAF IW +IF+ E FV+W L R + + G+ ++F AAC+ Q W IAF E I+AS L+ GIA SLA LT ++ +A S + V P+GLHGGWTLAA LVN+++A+ + +S A +++ V+ +AAV VA+ H Y LA+AW + AI + + LG A +ALE +AL + L+A+
Sbjct: 19 LLVFVNVVAFCFNVVITFLPSGVIG-KSNEEVSNQYETIITPAGWAFGPIWAIIFILEAAFVIWQCLPTARGNPWIL-GIGFWFAAACILQGCWGIAFAAEKIVASAVLLLGIAASLAFACSELTKLRKSAEAPELSWGRYVVVWLPLGLHGGWTLAAGLVNVSLAVYVEG-ASAQAQLVVAAVSLGIAAVGGLVASRQMHAA-YSLAVAWGLLAIGLNQATTRERLGEDTA----QALEYTSVALAIVLALAAL 265
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S2MNG6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MNG6_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.440e-31 Identity = 81/219 (36.99%), Postives = 117/219 (53.42%), Query Frame = 3
Query: 129 LNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVP-------FWTVHFPIGLHGGWTLAASLVNINIAIKSDSVSSGT----AAVILTVVAASVAAVVAAIHFHDQVYLLAIAWAVFAIA 752
LN Y++N V+ GV GG++ A +S +Y+T++TPAGWAFSIWG+IF + IFVV L ++R +V EGV Y++ C+FQ AW AF++E + S + I L+L ++ K Q K +P FW + FP +H GW + A VN+N+ + + + S T A V L +A S V+ D L IAWA AIA
Sbjct: 15 LNAVGYVLNFVITFAGV---GGENNATISAKYQTIITPAGWAFSIWGLIFTMQAIFVVLQLLPDHRRLPLVKEGVGYWYFGTCIFQVAWTCAFSYEVLWLSVLFMALILLTLIAII------KNQSK-----IPPDGTNQDFWLLRFPFSIHCGWIMVAFAVNVNVLVVASNAKSRTQVEWAIVSLAYIAFSSIYVLFCKRTTDTTMALVIAWAALAIA 219
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S3VGN8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGN8_9STRA) HSP 1 Score: 126 bits (317), Expect = 9.540e-30 Identity = 64/169 (37.87%), Postives = 97/169 (57.40%), Query Frame = 3
Query: 129 LNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINIAIKSDSVSSG 635
LNI Y +NL++ LFG AELS Y+T+VTP+G F+IWGV+F+ + +F + L + R ++V EGVS+++ AC+FQ AW AF +E + S + GI SLA++V L+ K + + + FW FP +H GW AA VN+N + + +G
Sbjct: 8 LNIVGYALNLLITFAASPLFGFPDNAELSDRYQTIVTPSGGTFAIWGVVFIAQAVFAIAQMLEQYRGEKLVQEGVSFWYFTACMFQCAWTFAFGYEVLWLSVIFMAGILASLAMIV--LSQSKIDSEPVKRVLDFWLFKFPFSIHCGWIAAAFAVNLNAFVVTTEAGAG 174
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S2LGL1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL1_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.070e-28 Identity = 91/275 (33.09%), Postives = 146/275 (53.09%), Query Frame = 3
Query: 126 LLNIAAYLINLVVVNWGVELFGGKSI---AELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWT---VHFPIGLHGGWTLAASLVNINIAIKSDSV--SSGTAAVILTVVAASVAAVVAAIHFHDQVYLLAI--AWAVFAIAS---------REDYRIKTLGAPEADGVTRALEVLYIALLCIGGLSAISDVRQRRRN 893
+LN AY++NL+V +G+ + G + +ELS +Y TL+TPAGWAFSIW +IF+ + +F+V + R+ +V +GV Y+++ C+ QA W IAF +E I S L+ I +SL ++V K FW + FP +H GW +AA+ +NI++ + S+ V +S +A IL+V A AV + Y++A+ AWA I+S RE + A E + VT A ++ +A+LCI ++ + RN
Sbjct: 46 ILNAVAYVVNLIVT-YGIGVLGIGGLPNNSELSDKYPTLITPAGWAFSIWAIIFISQAVFIVAQCFKKYRAHPLVQDGVGYWYVGTCISQAGWSIAFGYEVIWLSLVLMIAILISLVGLLVSQYKLKPGN--------FWDYVILCFPFAIHCGWIIAATFLNISVLLVSEDVDATSQLSAAILSVAALLSLAVYTLLALSSPEYVVAVVLAWANAGISSELSDPPTEIREHFDSVVTDALE-NSVTWAYAII-LAILCITVITNVIKSSMCSRN 309
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A835ZBV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV1_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.750e-28 Identity = 85/244 (34.84%), Postives = 119/244 (48.77%), Query Frame = 3
Query: 132 NIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNIN-IAIKSDSVSSGTAAVILTVVAASVAAVVAAIHFHDQVYLLAIAWAVFAI-ASREDYRIKTLGAPEADGVTRALEVLYIALLCIGGL 857
+ +A+ IN+ VV+ G +I ++S TL TPAG+AFSIW VIF E V+W AL N + V +G+ YF AC+ QA W I + +++ L V V L F+ + V +H PIGLH GW A + NIN +A + ++ A TV A VAA V D Y+ A+ WA+ +I A YR K LG A+G T A+ + I L + GL
Sbjct: 3 SASAFTINVAVVSASYLGLWGTTIKDVSGSIPTLTTPAGYAFSIWAVIFAGETALVIWQALPRNAGNPAVKDGLQLYFAGACVLQAIWSILVAQGERRQAMWMLIHAVACLGKVNVNLARFRLRDATW---VEHLLLHVPIGLHAGWAGANLVFNINLVAAQYAGTAAQVRAAFATVCVAGVAAGVFGFMLLDTAYVAAVVWALASIVADNNAYRDKLLGKDVAEGFTGAITTICIVLGAVQGL 243
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S1YFE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YFE7_9STRA) HSP 1 Score: 115 bits (289), Expect = 6.720e-26 Identity = 67/163 (41.10%), Postives = 95/163 (58.28%), Query Frame = 3
Query: 129 LNIAAYLINLVVVNWGVELFGGKSI---AELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYI-LASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINI 605
LN+ Y++N V+ +G+ G ELS +Y+TLVTP G AFSIWG+IF+F+ IFVV L R+ +V +GV Y++IA C FQAAW AF +E I LA F+I +A+V + + + L FW + FP +H GW AAS +N+N+
Sbjct: 24 LNVIFYILN-TVITFGIGTLGWTGTPDNGELSEKYQTLVTPKGTAFSIWGIIFIFQAIFVVVQLLPRFRAKAMVQDGVGYWYIATCAFQAAWTFAFAYEIIWLALIFIIXXXXXXVAIVYYQY--YLPSEGTL---SEFWLLRFPFMIHCGWLTAASTLNVNV 180
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A813GB70_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GB70_POLGL) HSP 1 Score: 114 bits (285), Expect = 9.490e-25 Identity = 78/210 (37.14%), Postives = 114/210 (54.29%), Query Frame = 3
Query: 132 NIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINIAIKSDSVSSGT----AAVILTVVAASVAAVVAAIHFHDQVYLLAIAWAVFAI 749
N+ AY+ N+ + + G++ LS +Y+T+VTPAGWAFSIWG IF++E +F V L ++RSS + V+ ++ AAC FQ AW F E++LA+ + GI SL +++ R + L S +W + P LH GW +AAS VN ++ S S+GT A V L V+ A V V A D + AWA+ AI
Sbjct: 28 NLLAYIANITITYLSLTGIFGETNTNLSKKYQTVVTPAGWAFSIWGPIFIWEGVFAVAQMLPKHRSSPVAQL-VTPWWSAACAFQVAWSAVFGAEFLLAACVCMLGILGSLLGLLLTA---DRARAPLSLS-EYWLLRAPFSLHAGWVIAASAVNASVLADSWMCSAGTLLALAIVSLAVILAVVVLFVVASPKPDAIISFVAAWALGAI 232
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Match: A0A7S1VUL7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUL7_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.140e-24 Identity = 76/216 (35.19%), Postives = 116/216 (53.70%), Query Frame = 3
Query: 117 MLWLLNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWGVIFLFELIFVVWAALGENRSSRIVNEGVSYYFIAACLFQAAWDIAFTHEYILASTFLICGIALSLAVVVVRLTPFKRQQKALFFSVPFWTVHFPIGLHGGWTLAASLVNINIAIKSDSVSSGTAAVI-----LTVVAASVAAVVAAIHFHDQVYLLAIAWAVFAI 749
+L +LN+ AY+ N VV + G KS ELS +Y+T++TPAG+AF+IWG+IF+ + I+ V A L + ++ +V + + Y ++ CL Q AW + F +E IL S + I L V L ++ + S FW + FP +H GW AAS VNI++ + A++ LT+VAA++ I D V +AWA FAI
Sbjct: 19 VLTILNLVAYIANFAVVFFITSFPGAKSNPELSEKYQTIITPAGYAFAIWGIIFVAQAIWAV-AQLFQYKNHPLVVDAIRYNYVFVCLAQVAWSLLFAYEQILVSLVAMLSIWYFLIQSVRGLKAVVEEESSTSQS-SFWLLQFPFLIHCGWITAASFVNISVVFVYFHAGATLQAIVGFTSLLTLVAAALL-----ISKDDAVIPCVLAWATFAI 227 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig116.1328.1 >prot_F-serratus_M_contig116.1328.1 ID=prot_F-serratus_M_contig116.1328.1|Name=mRNA_F-serratus_M_contig116.1328.1|organism=Fucus serratus male|type=polypeptide|length=291bp MLWLLNIAAYLINLVVVNWGVELFGGKSIAELSTEYRTLVTPAGWAFSIWback to top mRNA from alignment at F-serratus_M_contig116:707634..719051- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig116.1328.1 ID=mRNA_F-serratus_M_contig116.1328.1|Name=mRNA_F-serratus_M_contig116.1328.1|organism=Fucus serratus male|type=mRNA|length=11418bp|location=Sequence derived from alignment at F-serratus_M_contig116:707634..719051- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig116:707634..719051- >mRNA_F-serratus_M_contig116.1328.1 ID=mRNA_F-serratus_M_contig116.1328.1|Name=mRNA_F-serratus_M_contig116.1328.1|organism=Fucus serratus male|type=CDS|length=1746bp|location=Sequence derived from alignment at F-serratus_M_contig116:707634..719051- (Fucus serratus male)back to top |