mRNA_F-serratus_M_contig116.1326.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_F-serratus_M_contig116.1326.1
Unique Name	mRNA_F-serratus_M_contig116.1326.1
Type	mRNA
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))

Homology

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 1.570e-117
Identity = 178/228 (78.07%), Postives = 199/228 (87.28%), Query Frame = 1

Query:    1 MECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQAKPQLEVVRELFHEGQNLGF--GKPGGGE 678
            MECAP RCPTLRG  K+C N A+QTK FPATE+FRT EGRGWGLRL EE+GA+ GTLLHEYLGEVI +DECR+RLR++GRKG   S+ DFYFASLDGNLVLDGGPMG EARFANHSC+PNCL+QKWSV+GE RV LVAAR+IS GEELTYNYQADTLGGFVERQKC C EPQCSGFIGGE+V VKA+EW++R SKV+ QAKPQLEVVRELFHEG+ LG+     GGGE
Sbjct:  305 MECAPGRCPTLRGASKYCNNNAIQTKTFPATEVFRTFEGRGWGLRLAEERGAEAGTLLHEYLGEVIMMDECRRRLRKVGRKGVEGSSGDFYFASLDGNLVLDGGPMGGEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLGGFVERQKCLCGEPQCSGFIGGELVAVKAEEWQRRASKVMNQAKPQLEVVRELFHEGRELGYELSDEGGGE 532

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A835Z6U8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U8_9STRA)

HSP 1 Score: 270 bits (690), Expect = 8.570e-78
Identity = 136/268 (50.75%), Postives = 172/268 (64.18%), Query Frame = 1

Query:    1 MECAPDRCPTLRG---GIKHCLNTALQTKLFPATEIFRTSEGRGWGLRL-TEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEW---------------RQRTSKVVGQAKPQLEVVRELFHEGQNLGFGKPGGGEHDRCYAREMECLSIMLQEGDHWL 747
             EC P RCPTLRG   G ++C N+A+Q + +P TE FRTS+GRGWGLRL T  +    GTLL EY+GEVI++DEC++RL++LG++G      DFYFASLDG L+LD GPMGNEARFANHSCAPNC LQKWSVMGE RV + A R +  GEELTYNY+ADTL G V RQ+C C  P+C G IGG + +                     R+R  +V+ Q  P+      L  EG+ LG     G        RE+ECL+++ +EG+ WL
Sbjct:  184 QECLPGRCPTLRGLTDGRRYCENSAIQERRYPPTEAFRTSDGRGWGLRLCTTAEPVTAGTLLKEYVGEVISVDECKRRLKQLGKRG---KRGDFYFASLDGQLILDAGPMGNEARFANHSCAPNCELQKWSVMGETRVVMAAKRTLQPGEELTYNYRADTLDGCVTRQRCLCGAPRCPGLIGGTLRSAXXXXXXXXXXXXXXXXXXXXRERAVRVLRQRLPRFSEAAALLEEGRALGAAAARG--------RELECLAVLEREGEAWL 440

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A4D9DD50_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD50_9STRA)

HSP 1 Score: 222 bits (565), Expect = 3.960e-61
Identity = 110/217 (50.69%), Postives = 139/217 (64.06%), Query Frame = 1

Query:    1 MECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKAD--EWRQRTSKVVGQAKPQLEVVRELFHEGQ 645
            MEC   RCP+LR G  +C N  +Q   FPATE+FRT +GRGW LR  EE   + GTLL EY GEV+T++E + R+R +       + +D+YFA+L+G LVLD GPMG+EARFANHSCAPNC+LQKW   GE  + LVAAR + +GEE+TYNYQ DTL G   +Q CRC    CSG IG        D   W++R +  +    P LE V  L  EG+
Sbjct:  205 MECPVGRCPSLRDGELYCENMVIQQGQFPATEVFRT-QGRGWALRTREE--VEKGTLLIEYRGEVVTMEEAQTRMRSMS------AGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRMGAGEEVTYNYQVDTLAGMFGQQACRCGAKNCSGLIGKRPEGKGEDWEGWKERAAACLAMRAPSLEAVEALVQEGE 412

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A6H5JSL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL4_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.900e-60
Identity = 120/212 (56.60%), Postives = 137/212 (64.62%), Query Frame = 1

Query:  316 MGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQAKPQLEVVRELFHEGQNLGF--GKPGGGEHD------------------RCYAREMECLSIMLQEGDHWLAELAEVINGTT---------PEAGRKFGQACLGADD--LHPPGATKRL 858
            MG+EARFANHSC+PNCL+QKWSV+GE RV LVAAR+IS GEELTYNYQADTL GFVERQKC C EPQCSGFIGGE          +R SKV+ QAKPQLEVVRELFHEG+ LG+     GGGE +                      REMECLSIML+EGD WL ELA V+ GTT             RK+G   +G ++  + PP A   L
Sbjct:    1 MGSEARFANHSCSPNCLMQKWSVLGETRVVLVAARDISVGEELTYNYQADTLEGFVERQKCLCGEPQCSGFIGGE----------RRASKVMNQAKPQLEVVRELFHEGRELGYELSDKGGGEGEAGDXXXXXXXXAAGSGPTHYKGREMECLSIMLREGDEWLEELARVMEGTTIAXXXXXXXXXXXRKYGTGAVGVEETAVQPPPAAGEL 202

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A7R9U2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M8_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.630e-56
Identity = 105/235 (44.68%), Postives = 135/235 (57.45%), Query Frame = 1

Query:    1 MECAPDRC----PTLRGGIK-------HCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQAKPQLEVVRELFHEGQNLGFGKPGG 672
            MEC    C    P L  G         +C N ALQ + FPAT+++ T    G+GLR  E   A  GT++ EYLGEVIT +ECR RL      G     +D+YFASL G  VLD GPMG++ARFANHSC+PNC LQ W+V+GE RVALVA R+I + E L YNY++D L G V  Q CRC    C G IGG V      +W    ++ +G  + +LE ++ L    + LG  +  G
Sbjct:   20 MECPSGACCSLGPALSSGNSQPDTRRANCGNVALQVRQFPATDVYWTKTC-GFGLRALEAFPA--GTIVEEYLGEVITTEECRTRL------GTYTENQDYYFASLTGPYVLDAGPMGSKARFANHSCSPNCALQVWNVLGEPRVALVAIRDIRANEHLCYNYRSDDLNGEVSLQSCRCGSLNCCGVIGGRVEESDLQKWETDATRCLGLQRAKLESLQALIAHAEQLGVDECNG 245

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: W7TZX2_9STRA (Histone-lysine n-h3 lysine-36 and h4 lysine-20 specific n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZX2_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.680e-52
Identity = 85/151 (56.29%), Postives = 107/151 (70.86%), Query Frame = 1

Query:   67 LQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQC 519
            +Q   FPATE+FRT +GRGW LR  EE   + GTLL EY GEV+T++E + R+R +       + +D+YFA+L+G LVLD GPMG+EARFANHSCAPNC+LQKW   GE  + LVAAR + +GEE+TYNYQ DTL G   +Q CRC    C
Sbjct:    3 IQQGKFPATEVFRT-QGRGWALRTREE--VEKGTLLIEYRGEVVTMEEAQTRMRSMS------AGQDYYFAALEGELVLDAGPMGSEARFANHSCAPNCVLQKWRAGGEAHILLVAARRLGAGEEVTYNYQVDTLAGMFGKQACRCGAKNC 144

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A667Z8T7_9TELE (Nuclear receptor binding SET domain protein 1b n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Z8T7_9TELE)

HSP 1 Score: 162 bits (410), Expect = 2.100e-41
Identity = 94/253 (37.15%), Postives = 130/253 (51.38%), Query Frame = 1

Query:    4 ECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQAKPQLEVVRELFHEGQNLGFGKPGGGEHDRCY------AREMECLSIMLQEGDHW 744
            EC P  CP      + CLN A   + +   EIFRT   RGWGLR   +   K G  + EY+GE+I  +ECR R+R        +   +FY  +LD + ++D GP GNEARF NHSC PNC  QKW+V G+ RV L A  +I++G ELT+NY  + LG    +  C+C  P CSGF+G         E + R  K  GQ K + +VV  +  E ++  F    GG+   C           +CL++  +    W
Sbjct:  281 ECHPQVCPAG----ERCLNQAFTKRQYSQVEIFRTLS-RGWGLRCVHD--IKKGEFVSEYVGEMIDEEECRSRIRH----AQENDICNFYMLTLDKDRIIDAGPKGNEARFMNHSCQPNCETQKWTVSGDTRVGLFALVDITAGTELTFNYNLECLGNG--KTVCKCGAPNCSGFLGVRPKNNPPSEDKGRRVKKKGQGKRKNKVV--VTKEREDECFSCGDGGQMVSCKRPGCPKVYHADCLNLTKRPAGRW 518

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: A0A3B4AEI0_9GOBI (Uncharacterized protein n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4AEI0_9GOBI)

HSP 1 Score: 162 bits (409), Expect = 2.860e-41
Identity = 98/255 (38.43%), Postives = 132/255 (51.76%), Query Frame = 1

Query:    4 ECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVT-VKADEWRQRTSKVVGQAKPQLEVVRELFHE-------GQNLGFGKPGGGEHDRCYAREMECLSIMLQEGDHW 744
            EC P  CP    G K CLN A   + + + EIFRT   RGWGLR + +   K G  + EY+GEVI  +ECR R+R+       +   +FY  +LD + ++D GP GNEARF NHSC PNC  QKW+V G+ RV L A  +I +G ELT+NY  + LG    +  C+C  P CSGF+G        A E R R  K  G+ K +  + +E   E       GQ +   KPG  +         +CL +  +    W
Sbjct:  271 ECHPQVCPA---GEK-CLNQAFTKREYSSVEIFRTLS-RGWGLRCSHD--IKKGQFVSEYVGEVIDEEECRSRIRD----AQENDIGNFYMLTLDKDRIIDAGPKGNEARFMNHSCRPNCETQKWTVSGDTRVGLFALEDIPAGTELTFNYNLECLGNG--KTVCKCGAPNCSGFLGVRPKNNPPASEDRGRKFKRRGRRKSRAVLTKEREDECFSCGDGGQLVSCKKPGCPK-----VYHADCLQLTRRPAGRW 507

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: T1EE98_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EE98_HELRO)

HSP 1 Score: 161 bits (407), Expect = 7.490e-41
Identity = 95/255 (37.25%), Postives = 137/255 (53.73%), Query Frame = 1

Query:    4 ECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQAKPQLEVVRELF-HEGQNLGFGKPGGGEHDRC------YAREMECLSIMLQEGDHWL 747
            EC    CP      + CLN A+Q++    TE FRT++ RGWGLR   +   K G  +HEY+G++I  +EC++RLR    +    +  +FY  +LD N ++D GP GN +RF NHSC PNC  QKW+V G+ RV L A R I +GEELT+NY  D LG   ++  C C  P CSGF+G    +   +   +RT     + +    V ++L  HE  +L F    GGE   C       +  ++CL++       W+
Sbjct:  321 ECDVAVCPAG----EMCLNRAIQSRWDVDTEYFRTADNRGWGLRTKID--IKKGQFIHEYVGDLIDEEECKERLR----RAKESNVTNFYMLTLDKNRIIDAGPKGNNSRFMNHSCQPNCETQKWNVNGDVRVGLFAMRFIEAGEELTFNYNFDCLGD--KKTICHCGMPVCSGFLGERPKSTSTEA--ERTLITKKKKRRARNVTKDLIVHE--DLCFRCGLGGELVLCDKTGCTKSYHLDCLNLNHLPRGKWI 559

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BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Match: UPI001865443A (histone-lysine N-methyltransferase, H3 lysine-36 specific n=1 Tax=Colossoma macropomum TaxID=42526 RepID=UPI001865443A)

HSP 1 Score: 163 bits (412), Expect = 9.190e-41
Identity = 94/256 (36.72%), Postives = 130/256 (50.78%), Query Frame = 1

Query:    4 ECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEKGAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLVLDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTYNYQADTLGGFVERQKCRCREPQCSGFIGGEVVTV--KADEWRQRTSKVVGQAKPQLEVVRELFHE-------GQNLGFGKPGGGEHDRCYAREMECLSIMLQEGDHW 744
            EC P  C       + C N     + +   EIFRT   RGWGLR   +   K G  + EY+GEVI  +ECR R++        +   +FY  +LD + ++D GP GN+ARF NHSC PNC  QKW+V G+ RV L A  ++ +G ELT+NY  + LG    +  C+C  P CSGF+G          D+ R+   KV G+ K QLEVV+E   E       GQ +   KPG  +         +CL++  +    W
Sbjct: 1668 ECHPQVC----AAGERCQNQCFTKRQYSPVEIFRTLS-RGWGLRSISD--IKKGAFVSEYVGEVIDEEECRARIKH----AQENDISNFYMLTLDKDRIIDAGPKGNQARFMNHSCQPNCETQKWTVNGDTRVGLFALEDVGAGVELTFNYNLECLGNG--KTVCKCGAPNCSGFLGVRPKNQPPSEDKGRKLRKKVTGKRKSQLEVVKEREDECFYCGDGGQIISCKKPGCPK-----VYHADCLNLARRPAGRW 1905

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig116.1326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LN51_ECTSI	1.570e-117	78.07	Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A835Z6U8_9STRA	8.570e-78	50.75	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A4D9DD50_9STRA	3.960e-61	50.69	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A6H5JSL4_9PHAE	1.900e-60	56.60	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7R9U2M8_9STRA	8.630e-56	44.68	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
W7TZX2_9STRA	9.680e-52	56.29	Histone-lysine n-h3 lysine-36 and h4 lysine-20 spe...	[more]
A0A667Z8T7_9TELE	2.100e-41	37.15	Nuclear receptor binding SET domain protein 1b n=1...	[more]
A0A3B4AEI0_9GOBI	2.860e-41	38.43	Uncharacterized protein n=1 Tax=Periophthalmus mag...	[more]
T1EE98_HELRO	7.490e-41	37.25	Uncharacterized protein n=1 Tax=Helobdella robusta...	[more]
UPI001865443A	9.190e-41	36.72	histone-lysine N-methyltransferase, H3 lysine-36 s...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig116	contig	F-serratus_M_contig116:672737..678063 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-19
OGS1.0 of Fucus serratus male	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	380.9
Seed ortholog evalue	6.2e-103
Seed eggNOG ortholog	2880.D8LN51
KEGG rclass	RC00003,RC00060,RC00181,RC00496
KEGG ko	ko:K06101,ko:K07117,ko:K11423,ko:K11424,ko:K11728
KEGG Reaction	R03875,R03938,R04866,R04867
KEGG Pathway	ko00310,ko05202,map00310,map05202
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000228,GO:0000803,GO:0000805,GO:0003006,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0007275,GO:0007530,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009987,GO:0010452,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018024,GO:0018193,GO:0018205,GO:0018992,GO:0019222,GO:0019538,GO:0022414,GO:0030849,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0034968,GO:0036211,GO:0040029,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046975,GO:0048519,GO:0048856,GO:0050789,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.	SET domain
EggNOG OGs	COG2940@1,KOG1081@2759,KOG1632@1,KOG1632@2759
Ec32 ortholog description	Zinc finger and SET domain protein
Ec32 ortholog	Ec-05_003500.1
EC	2.1.1.43
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03036
Exons	8
Model size	1053
Cds size	1053
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig116.1326.1	prot_F-serratus_M_contig116.1326.1	Fucus serratus male	polypeptide	F-serratus_M_contig116 672737..678063 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at F-serratus_M_contig116:672737..678063-
coding sequence from alignment at F-serratus_M_contig116:672737..678063-

protein sequence of mRNA_F-serratus_M_contig116.1326.1

>prot_F-serratus_M_contig116.1326.1 ID=prot_F-serratus_M_contig116.1326.1|Name=mRNA_F-serratus_M_contig116.1326.1|organism=Fucus serratus male|type=polypeptide|length=351bp
MECAPDRCPTLRGGIKHCLNTALQTKLFPATEIFRTSEGRGWGLRLTEEK
GAKTGTLLHEYLGEVITLDECRQRLRELGRKGDADSTKDFYFASLDGNLV
LDGGPMGNEARFANHSCAPNCLLQKWSVMGENRVALVAARNISSGEELTY
NYQADTLGGFVERQKCRCREPQCSGFIGGEVVTVKADEWRQRTSKVVGQA
KPQLEVVRELFHEGQNLGFGKPGGGEHDRCYAREMECLSIMLQEGDHWLA
ELAEVINGTTPEAGRKFGQACLGADDLHPPGATKRLQVPHSGNTMGNESL
PVTCVGARRSNRTGLSGQRRRYDRGHDTNGATDQKTHQNSAQQGIGKEKA
K

mRNA from alignment at F-serratus_M_contig116:672737..678063-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_F-serratus_M_contig116.1326.1 ID=mRNA_F-serratus_M_contig116.1326.1|Name=mRNA_F-serratus_M_contig116.1326.1|organism=Fucus serratus male|type=mRNA|length=5327bp|location=Sequence derived from alignment at F-serratus_M_contig116:672737..678063- (Fucus serratus male)
ATGGAATGCGCTCCCGACCGTTGTCCGACGCTGCGCGGGGGGATCAAGCA
TTGCCTAAACACTGCTCTCCAGACCAAATTATTTCCAGCGACAGAGGTGA
GGTACTGTAGGAGCGAAGTGAGGAGGGAATAGAATCTCTTCAGGATCACT
TCTTGAAGGCGGCGCCAACATAATGCTCGCTCCCACAGAGTGATTGCAGT
TAAAATGGATGATCTTCCAGTACACGTAACGTACGAGCGCTCTTCTTAAC
TATTGGGAGTGTCAATCGTTAGGGGTTTTACAAGGGTTTAGATTATTATT
TCGCGGGACAAAGTGGAAGTTTTACGGCTTGTCAAGATTTGCTGTTGTCC
GAAATCGTCCACCTCCCGTCGCCAGATTTTTCGCACCTCGGAAGGGAGAG
GATGGGGGCTAAGGCTGACGGAGGAAAAGGGGGCCAAGACAGGGACCCTG
CTCCACGAGTACCTCGGAGAGGTGATATCAAATACGAGCACACCTGATAC
AGTGATCTACTACAAGTAAATGTGTCATACTAGCTATTGAGCTAAGTAGC
GACCAAGTGGTTCGATGTAGATTATGCTGACCTATCTTTTGATCGTGTGT
ACGGGATCGTTGTGACTTGGTCGAGTGTGCTTCAGACAACAAGCCCCTTC
CGACAAGATCGATTTTACCACGCGCATACACACCCATACACCCTAACAGC
AGTACACACACGCACACACACACACACACACACACACACTCGTAATAAGT
ATCATTGATCCCCCCTCGGGAGAATCAATGCGAGTGGCATAGAATGACTA
GGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACAC
ACACACACACACACACACACACACACACACACACACGCCAACTCAAATAT
TGTAGAGATTAATAAGGAAGCAGGGGGGGGAGCACAAGGAACTCTGAGTT
TAAGTGAAAATTGTACAAGTAGAGAGAGCGTGTCCCCTTTGTCGCGTCTG
ATTAGAGGTTTTCGTAATAAGTATCATTGATCCCCCCTCGGGAGGATCAA
TGCGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTAT
GTGCAATTTAATAAATACACACACACACACACACCTTCGGGGGTGGGGAT
GGAGCGGGAACGGGAAAGGGGGTAGAGGCGAACGAAGGAGCGCAAGATGG
GGACGGGAGCGGGGGTGGAGACCCGTGAACGAACACAGGATGGGATGGGA
GTGGGGACGGGAGCGGTTCGGAAACGAGAACAGTAGCGGAGATGGGGACG
AGGATGAGAACGGGAACGAGGATAGGATCGGGGAGGGCGGAGGAGAGGCG
AAGAAGCGCAAGAAACCGTACAAGAGTTGTTGACGCCATGTGGGAAACGG
GAGAGACTGGGCGGGAAGAGAAAAAAAATAGAAAACCAAGGGTTTGTCTA
ATAGCTGCCACAACCCAGATAATCTACAGAGTCACAGCGAAGCAGAGGGG
GGAGCATAATGTATCCAGGGCCAAGTAAGAACTGTACAAGTAGAGAGAGT
GTTTTCCTTTTGTCGCGTCTGATCAGAGGTTTTGATCCTCCCTTGGGATG
ATCAATGCGAGTGGTATAGAATGACTAGGATGACAGGGCCGGATTGCGCG
GTTATGTGCAACTTAATAAATACAACACACACTATTCATGCAGCATTCTA
AATCCATCCATGACTTGAATATTTCCTTCATCGACACCGATCCTACAGTA
CTACAGTATCCTAGACCTATTAATGATGTAACAAATTGAACTGTAATCTA
AAATCATCGTGTCTTTTGACTATTCCTTGTTTGGTGTCCCTGCATGGGAT
TAATGTAAGTGTGGAGTATAACGGTGGGTTTCTCCCCGGTATTATTATAC
TGTTGTTGATGACCCATTATCACTATTAATACCATCGGGGAACCCGTTTA
AATGCCATGAAGAGGTTTTGTCTTTGCAGCCTATGATTCCACCTAAACGC
TTCGACATTTTTCTCCCCTGACTATTACTGTTACTATTACTATTACTATT
ACTATTAATAGGGGGTGCCCAGAAGGTATAGATGCGTTCAGATTTTTCTT
TAAACAACCCGCGAACAGCAATACGATGTCAACAGTAAGAAAGGGAGTGA
GATAGTTAGGAGGGCACATTGAATTCCACGAAATTCTCCCTCCGGTTCGA
AATAATGTAAACGCGGCCGCGGAAATCTAGAGAAATCAAGTGGGTAAGCA
CCAGATGGGCAGGACGCGGGACGGGACGGCCGAACCCGTCTCGCGAGACC
AAATTCTCAAGCGCGAACGGGGACAATGTTCATTTTCCGTGTTCAGCTGA
CCACGAGCAGGATTGGGGCAACCTTATGCGGTCATCAAGACTCTCCTATA
TGTGATGATCATACAGTCACCCCAAGCATCACCCCTACCCATACTATGTT
GGCCTCAAACGCTGACCTCGAACCTTGAACCTCGATAAACACTGAGGCCA
TACCATGACTTTTGGGGTGTGAAATTAACCAGGTAATCACCCTGGACGAA
TGCCGCCAACGATTGCGCGAACTAGGAAGAAAGGGTGATGCAGACTCCAC
CAAAGACTTCTACTTCGCCTCGCTCGATGGAAATCTTGTTCTTGATGGCG
GTGAGAAACATCAAAACAAGGAGAAAGAGGACACAGACAGTTGGTACTAT
GTTAGTAATATGTTTAAACGATGGTAATGTTAAGATCGTCACCCGCAAAC
ACTCATGGTAATATTAAGTAAAGTCTCCGGCGGCTCCGGCGGCGTTAGTA
ATGATTGTTGGGATATAGTTGATCCTCTAGTGGTACGTAGGAATAGCTCT
TAGGTTAGGGTCAGTTAGGGTTGGTCCCCGGGTGATATATAGGAACGGTT
CTAAGACGGATATTGTAACCACCAACGGTACATTCCTCTTGCTGCGTACT
GTATGTCCGGTGCCATCGAGCTGCGTTGCTTTTAGCTAGATCTACAACTA
AAATAATAGCGTTTATTGATAGCGCTGGGCTTGCTGCGTCCTTTTGGCGC
CTTCTGATGTATGAATACGCCTGACAGGCCCAATGGGCAATGAGGCTCGC
TTTGCCAATCATAGCTGTGCCCCCAACTGCCTTCTTCAAAAGTGGAGCGT
CATGGGCGAGAATAGAGTCGCCCTCGTCGCGGCGAGGAATATTTCCTCTG
GCGAGGTGAGGTGTATCCTTGTTGTACCAGGTATTATTATTATTAATATC
GTTAACCGCACGCTGTGACTTGTGAATGTGACTGCAGCATTCTCAACTTG
TCCTCATTTTCAACTTGTCCTCATTTTCATCTTGTCCTCATTTTCAACTT
GTCCTCATTTTCAACTTGTCCTCATTCTAAATAGTTCTAGGTATGAAATA
CCTCAGTACCTCAGTATAGTAGGGATCATGTCGAGGTCAACCAGGACTTC
GCTGCTCAGATTCAGATTTCCATTTTTGGCGTCTATTATTAGATCTGCGT
GCTTTGGGGGTATTGAATGTTCGTGAGCGACTGAAGCAGGATCCATGGTC
TACCGAGGTATGCACCTGCTGCCTATTTATAAATAGTCTATTTTATTAAT
GGTCATAGTCGTGCGCCCTCCTCCCCAAAAGCGCTCACAGCGGTGTAATT
TGTTGTCTTGTCACGTACATGACCCAAATCGCGGCAGGAGCTGACGTACA
ACTACCAGGCCGATACGCTTGGAGGGTTCGTGGAGAGGCAAAAGTGCCGA
TGCAGGGAGCCTCAATGTAGTGGTTTCATAGGGGGCGAGGTGAGGCTGGG
CAAGACCTATCTGTACCGATTTTGACCGCATTTGTTTCGAAAGTCTCGTA
CAGCATGAGATATTACATGATTACGTTGGAAAATTATACTCCGAGTAGAC
ATGAAAGTTCTTTGAAAGAAGAGATGATGGACACACTGTATTTACCAGTA
TACTCAAGGCATAGACCTACTATTAATAGCTCCTTTTGTGTTTTCACACT
GCTTTTATGTTTTCATTCCCTCGGTAGAGCCTCATGATGATACATTGCCT
TTTGTTGTTGTTGCTGTGGTTGTTGGTGGTGTTACTTTTCTGGTGAAGGT
AGTGACAGTGAAAGCCGACGAGTGGCGGCAGCGCACGTCTAAGGTTGTGG
GTCAGGCTAAGCCGCAGTTGGAAGTGGTGAGGGAGCTCTTCCACGAGGGA
CAAAATCTGGGGTTCGGAAAGCCAGGTGCGGACGCGGACACTGACAAATC
AAAAGCGGTTAACTTACAGCATACGAAGTACAGTACTGTACCTGGTATAC
TCTAGAGTAGACTAGATCCCATCTTGCGCTCTCATCGTGTCCATCTTGGA
ATATCATTTGAGTTGCATCGCCTATTGACAGAAATACAGTTACTGTACTG
CTATTAGTAAGTAGCAGGTAAGTAGCAGTACAAGTGCTTACATTATCATT
GTTTCTATAATAGTACCAGTACAAGTACGTGCTTACATGCAGTATATTTA
CGCCCAGTCGTGTACCTGATACAATCTATTAATAGAGGTAATCGAGCTAT
TAATACTATAGTAATAGTCTAGAGCTAATAGAGCTAATAATAATAGAGCT
ATTGTTATGTATTGCCTGCCACCGGATGCGTTGGGTGCGTTCAAGAATAC
GGCGCGTTGTGACCTTTGTTCGTGGACAAAGGTGGAGGTGAACATGATCG
CTGCTACGCACGGGAGATGGAGTGTCTGTCGATCATGCTCCAGGAGGGGG
ACCATTGGCTTGCAGAGCTCGCGGAAGTAATAAACGGCACAACCCCGGAA
GCTGGCCGCAAGTTTGGTCAGGCCTGCCTCGGAGCTGACGATCTGCATCC
CCCAGGGGCGACGAAGCGCCTGCAGGTCCCCCACAGCGGCAACACGATGG
GAAATGAATCACTTCCAGTTACTTGTGTTGGTGCTCGCAGAAGCAACCGA
ACAGGCCTCTCTGGCCAACGCAGGCGTTACGATCGCGGACACGATACCAA
TGGCGCCACAGACCAGAAAACTCACCAAAACTCGGTAAGGCTGTGAACAT
CATGGCAGGTTTTTCACGGCATCATGTACCAAGTCTTTCCCTAGAATAAT
GGCATATCTGGTCCTTGTGTGACATGCGACGGCTTTTTGCGGCGAGAAAT
GGGGCGTGAGTTAACCACGGATTGAGGTGTGATGTCAGCCACCTACAGCG
AAACGGTTGAGTGTGACGTGAGACACGGTCGTCCACTCACAAAAGTATAA
ACAATTAAGTTATTGTCGTCGATATTTCTCCCCTTGAACTACAGGCCCAA
CAAGGAATAGGGAAAGAGAAAGCTAAG

Coding sequence (CDS) from alignment at F-serratus_M_contig116:672737..678063-

>mRNA_F-serratus_M_contig116.1326.1 ID=mRNA_F-serratus_M_contig116.1326.1|Name=mRNA_F-serratus_M_contig116.1326.1|organism=Fucus serratus male|type=CDS|length=2106bp|location=Sequence derived from alignment at F-serratus_M_contig116:672737..678063- (Fucus serratus male)
ATGGAATGCGCTCCCGACCGTTGTCCGACGCTGCGCGGGGGGATCAAGCA
TTGCCTAAACACTGCTCTCCAGACCAAATTATTTCCAGCGACAGAGATGG
AATGCGCTCCCGACCGTTGTCCGACGCTGCGCGGGGGGATCAAGCATTGC
CTAAACACTGCTCTCCAGACCAAATTATTTCCAGCGACAGAGATTTTTCG
CACCTCGGAAGGGAGAGGATGGGGGCTAAGGCTGACGGAGGAAAAGGGGG
CCAAGACAGGGACCCTGCTCCACGAGTACCTCGGAGAGATTTTTCGCACC
TCGGAAGGGAGAGGATGGGGGCTAAGGCTGACGGAGGAAAAGGGGGCCAA
GACAGGGACCCTGCTCCACGAGTACCTCGGAGAGGTAATCACCCTGGACG
AATGCCGCCAACGATTGCGCGAACTAGGAAGAAAGGGTGATGCAGACTCC
ACCAAAGACTTCTACTTCGCCTCGCTCGATGGAAATCTTGTTCTTGATGG
CGGTAATCACCCTGGACGAATGCCGCCAACGATTGCGCGAACTAGGAAGA
AAGGGTGATGCAGACTCCACCAAAGACTTCTACTTCGCCTCGCTCGATGG
AAATCTTGTTCTTGATGGCGGCCCAATGGGCAATGAGGCTCGCTTTGCCA
ATCATAGCTGTGCCCCCAACTGCCTTCTTCAAAAGTGGAGCGTCATGGGC
GAGAATAGAGTCGCCCTCGTCGCGGCGAGGAATATTTCCTCTGGCGAGGC
CCAATGGGCAATGAGGCTCGCTTTGCCAATCATAGCTGTGCCCCCAACTG
CCTTCTTCAAAAGTGGAGCGTCATGGGCGAGAATAGAGTCGCCCTCGTCG
CGGCGAGGAATATTTCCTCTGGCGAGGAGCTGACGTACAACTACCAGGCC
GATACGCTTGGAGGGTTCGTGGAGAGGCAAAAGTGCCGATGCAGGGAGCC
TCAATGTAGTGGTTTCATAGGGGGCGAGGAGCTGACGTACAACTACCAGG
CCGATACGCTTGGAGGGTTCGTGGAGAGGCAAAAGTGCCGATGCAGGGAG
CCTCAATGTAGTGGTTTCATAGGGGGCGAGGTAGTGACAGTGAAAGCCGA
CGAGTGGCGGCAGCGCACGTCTAAGGTTGTGGGTCAGGCTAAGCCGCAGT
TGGAAGTGGTGAGGGAGCTCTTCCACGAGGGACAAAATCTGGGGTTCGGA
AAGCCAGGTAGTGACAGTGAAAGCCGACGAGTGGCGGCAGCGCACGTCTA
AGGTTGTGGGTCAGGCTAAGCCGCAGTTGGAAGTGGTGAGGGAGCTCTTC
CACGAGGGACAAAATCTGGGGTTCGGAAAGCCAGGTGGAGGTGAACATGA
TCGCTGCTACGCACGGGAGATGGAGTGTCTGTCGATCATGCTCCAGGAGG
GGGACCATTGGCTTGCAGAGCTCGCGGAAGTAATAAACGGCACAACCCCG
GAAGCTGGCCGCAAGTTTGGTCAGGCCTGCCTCGGAGCTGACGATCTGCA
TCCCCCAGGGGCGACGAAGCGCCTGCAGGTCCCCCACAGCGGCAACACGA
TGGGAAATGAATCACTTCCAGTTACTTGTGTTGGTGCTCGCAGAAGCAAC
CGAACAGGCCTCTCTGGCCAACGCAGGCGTTACGATCGCGGACACGATAC
CAATGGCGCCACAGACCAGAAAACTCACCAAAACTCGGTGGAGGTGAACA
TGATCGCTGCTACGCACGGGAGATGGAGTGTCTGTCGATCATGCTCCAGG
AGGGGGACCATTGGCTTGCAGAGCTCGCGGAAGTAATAAACGGCACAACC
CCGGAAGCTGGCCGCAAGTTTGGTCAGGCCTGCCTCGGAGCTGACGATCT
GCATCCCCCAGGGGCGACGAAGCGCCTGCAGGTCCCCCACAGCGGCAACA
CGATGGGAAATGAATCACTTCCAGTTACTTGTGTTGGTGCTCGCAGAAGC
AACCGAACAGGCCTCTCTGGCCAACGCAGGCGTTACGATCGCGGACACGA
TACCAATGGCGCCACAGACCAGAAAACTCACCAAAACTCGGCCCAACAAG
GAATAGGGAAAGAGAAAGCTAAGGCCCAACAAGGAATAGGGAAAGAGAAA
GCTAAG