mRNA_F-serratus_M_contig116.1315.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 2.240e-126 Identity = 195/304 (64.14%), Postives = 231/304 (75.99%), Query Frame = 3
Query: 435 KKGLHQIGGAFLAVELASNSPHSIVHPVGGILHVRLEIVAPREVSSFPFTVADVTRALTLQARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGEQHV---QSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEE----TDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
++GLH+ GG LAVELAS +P SIVHPVGGILH+RLE+VAP EVS+FPF DVTR + QA + R E RRDFYLYA+AWWK F+S SK L KR VKIFAEDE+GQHRCVCSF+ PYR+GR+LPTPRHAARF+SLLPF+ R VGEQ ++WNSPH+FLAAG GDASDHALLLCSLLLGFGLDALVC G VH +++ G+ + G G+ G + +GEET H+WVCTFS R+DKKA FWE+LTGQRF+M PR R + +AV+P HFS+VSCMFNHREF ANKQ
Sbjct: 153 QEGLHKSGGVLLAVELASGAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASV---RSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWNSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPSDDDNGDGDASGAEPGGVGVRGGDSDGNRGEETGHMWVCTFSGSRADKKAVFWESLTGQRFAMSAPRPRPS-RGRRTTPGKMAVTPRHFSKVSCMFNHREFLANKQ 452
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A7S1TR63_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR63_9STRA) HSP 1 Score: 198 bits (503), Expect = 6.800e-54 Identity = 126/297 (42.42%), Postives = 161/297 (54.21%), Query Frame = 3
Query: 459 GAFLAVELASNSPHSIVHPVGGILHVRLEIVAPREVS---SFPFTVADVTRALTLQARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVG-EQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATE--EAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFS--APRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
GAF AVELA+ P S++H G+LH+R+E+ A + PFT DV A+ AR R R FYLYA WW FT++ L +R V +FA DE G HR VCSFV P R GRLL +P+ AARF++LLPF+R VG ++W+SP +FLA GD DHA+LLCSLLLGFGLDA V +G + + AE E T + + +H WV TFS A K FWE+LTGQR+++ G K VS V +F+ F ANKQ
Sbjct: 19 GAF-AVELAAAGPDSVLHGSAGLLHLRMEVEAGGDADVEIEMPFTKRDVEEAVEKTARSGADR---ARAFYLYARRWWADFTAIDPLLAQRRVALFAADEAGGHRSVCSFVAPLRAGRLLASPQDAARFVALLPFERAFGVGLRARQETWHSPAAFLARRAGDVEDHAVLLCSLLLGFGLDAYVAVGTIRGDKVISAENETTGAEPEDVR------------DHAWVVTFSRTADGVGLKVSFWESLTGQRYTL-----------GSKTRSHPYVS------VGSVFSDTSFHANKQ 282
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A7S2S781_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S781_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.060e-50 Identity = 116/299 (38.80%), Postives = 160/299 (53.51%), Query Frame = 3
Query: 435 KKGLHQIGGAFLAVELASNSPHSIVHPVGGILHVRLEIVAPREVSSFPFTVADVTRALTLQARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGEQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQVQ 1331
+K L + GGA + VEL P + V G+L +RL++V P V +++ +TL+ I RR F YA WWK + +++ R R VKIF E+E G+H C+ V P R GRLL +PRHAARF+SLLP+ VG ++ W++ HS L +GD DHALLLCS LLGFGLDA VCIG + E GE+ EH+WV + S +++++ FWE+LTGQ R R G K + + RV C+FNHR F+ANKQ++
Sbjct: 268 RKILCKNGGASVVVELRGIGPTAKVRIPVGMLDLRLDLV-PSVVGDTSVLLSERDVDMTLETESRAIARSHRR-FCEYARVWWKEYIETNQSFRGRCVKIFVENEWGEHVPACTMVRPLRAGRLLDSPRHAARFVSLLPYIHEESVGGGRLEIWHTVHSILCRRQGDVEDHALLLCSFLLGFGLDAYVCIGLIDDDENPGGEK---------------------EHVWVVSLSG-KANRQVLFWESLTGQTLD----RQTLVGRDGAKPNCP-------YRRVDCVFNHRTFYANKQLK 531
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A2R5GMW5_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMW5_9STRA) HSP 1 Score: 189 bits (479), Expect = 6.020e-49 Identity = 117/293 (39.93%), Postives = 155/293 (52.90%), Query Frame = 3
Query: 456 GGAFLAVELASNSPHSIVHPVGGILHVRLEIVAPREVSSFPFT---VADVTRALTLQARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGEQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
G A +AVEL + + V GIL +RLE+V R S P T + RA T QA + R F YA AWW+ F + R R VKIFAE+E G H V +FV P R GRLL + RHAARF+SL+P+ R VG ++ W+ H+FL+ GRGD DHA+LLC+LLLGFGL+A VC+G V + E E +H+W T S + ++ FWE+LTG R M PR R + A++ + R++C FNH F+ANKQ
Sbjct: 235 GAATVAVELHATGEAAKVRVPAGILDLRLELVPARPGPS-PLTDEKLLTSLRANTKQAG------QAYRQFCEYARAWWEEFVELDDRFRHRLVKIFAENEWGDHEPVFAFVRPMRAGRLLASARHAARFVSLIPYTREEMVGGSRLEVWHVAHTFLSKGRGDCEDHAVLLCNLLLGFGLNAFVCMGTVQDSPEEP----------------------ERDHVWCMTLSG-KDNRTCTFWESLTGHRVVM-APR-----RDVESAAQTALRQS--YRRIACAFNHESFYANKQ 489
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A7R9UA61_9STRA (Centrosomal protein of 76 kDa (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA61_9STRA) HSP 1 Score: 180 bits (457), Expect = 9.760e-47 Identity = 112/291 (38.49%), Postives = 153/291 (52.58%), Query Frame = 3
Query: 471 AVELASNSPHSIVHPVGGILHVRLEIVAPREVSS---FPFTVADVTRALTLQARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVG-EQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFS--APRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
AVEL + P S++ GGILH+R+E+ A + + PFT ++ ++ A+ R R F LYA WW +T++ + +R +FA DE G HR VCSFV P R RLL +P+ AARF+SL+PF+R VG + ++W++ +FL+ G GD DHA+LLCSLLLGFGLDA V +G + E K +A +H WV TF+ A K FWE+LTGQR+ + G K VS V C+FN FF NKQ
Sbjct: 191 AVELIAAGPDSVLQGTGGILHLRMELQAGGDSETQIELPFTSKEIEESVDKTAKDAANR---TRAFVLYARRWWAEYTNIDPLIDQRRTCLFAADEAGGHRSVCSFVSPVRAERLLHSPQDAARFVSLIPFERSYGVGVRKRHETWHNACAFLSRGAGDVEDHAVLLCSLLLGFGLDAYVVLGTIRGDRVLTAENETAKQIDDQA----------RDHAWVVTFARTADSVGMKVSFWESLTGQRYEL-----------GSKHRSHPYVS------VGCVFNDAAFFGNKQ 451
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A7M5WST8_9CNID (Centrosomal protein of 76 kDa n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WST8_9CNID) HSP 1 Score: 178 bits (451), Expect = 3.840e-45 Identity = 104/269 (38.66%), Postives = 134/269 (49.81%), Query Frame = 3
Query: 522 GILHVRLEIVAPREVSSFPFTVADVTRALTLQARIHIIRHEER-RDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGEQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
GIL +++ ++ PR T +T Q + R ER R F Y+ WW+ + + T R VKIFA+DE HR VCS++ P R GRLL TPR AARF+SLL +++ P V + W S HSFLA G+GD DH +LLCSLLLGFGLDA VCIG K +GI H WV T + D FWE+LT QR+ HQ I + + V C+FNH+ F+AN Q
Sbjct: 243 GILDIKMNLI-PR------LNQVTTTDVITTQLNLERTRVAERDRLFLAYSKQWWREYLQIRSTHSNRLVKIFAQDENSIHRFVCSYLRPLRSGRLLDTPRQAARFVSLLGYEKHPVVSGTRTEMWTSMHSFLARGKGDVEDHCVLLCSLLLGFGLDAYVCIG--------------TKAKGI-------------SHAWVVTINP---DGTVLFWESLTAQRYQ------HQEINPHDPPLAKQKQPSYQYRTVGCIFNHQAFYANSQ 468
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A6P4Z5V2_BRABE (Centrosomal protein of 76 kDa n=6 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z5V2_BRABE) HSP 1 Score: 174 bits (440), Expect = 1.400e-43 Identity = 118/287 (41.11%), Postives = 148/287 (51.57%), Query Frame = 3
Query: 471 AVELASNSPHSIVHPVGGILHVRLEIVAPREVSSFPFTVADVTRALTL-QARIHIIRHEERRDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGE-QHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
AVEL S V PVG +L VRLEI+ P V + V +T L L Q+R R E R F +YA WW+ F + T R VKIFA+DE +R VCSFV P + GRLL TPR AARFISLL +++ VG + W + H+FL +GD DH++LLCSLLLGFGLDA VC+G KT T H WV T D +A FWE+LTG R+S HQ I + + + V C+FNH+ F+AN Q
Sbjct: 237 AVELMGVGTESKV-PVG-VLDVRLEIL-PHPVQTLAPDV--ITTQLNLEQSR----RAERERLFLVYAKQWWREFLQIRGTNSSRLVKIFAQDENATNRPVCSFVRPLQAGRLLDTPRQAARFISLLTYEKASTVGGGPRAEQWCTMHAFLCRNKGDCEDHSVLLCSLLLGFGLDAYVCVG------------------------TKTNN---TAHTWVLTLGM---DGEATFWESLTGHRYS------HQPINPDDPPTVEQPRPQYPYRSVGCVFNHQVFYANSQ 478
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A2B4RZC0_STYPI (Centrosomal protein of 76 kDa n=5 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RZC0_STYPI) HSP 1 Score: 172 bits (436), Expect = 2.410e-43 Identity = 103/269 (38.29%), Postives = 139/269 (51.67%), Query Frame = 3
Query: 522 GILHVRLEIVAPREVSSFPFTVADVTRALTLQARIHIIRHEER-RDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGEQHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
GI+ ++ EI+ PR + +T Q + R ER R F +YA WW+ F + + R VKIFA+DE G +R VC FV P R GRLL +PRHAARF+SLL ++ P VG + W+S H+FL G+GD DHA+LLCSLLLGFGL+A VC+G T KG H WV T S + + FWE+LT R++ H+ + + + H + V C+FNHR F+AN Q
Sbjct: 237 GIVEIKFEII-PR------LSQILTKEVITAQENLEHSRIAERERLFLVYAKQWWREFLQIRASHSNRLVKIFAQDECGTNRPVCLFVCPLRAGRLLDSPRHAARFVSLLGYEHAPSVGGGKAEMWSSLHAFLCKGKGDCEDHAVLLCSLLLGFGLNAYVCVG------------TKAKG---------------AAHTWVMTISP---EGEVNFWESLTAHRYA------HRPVNPDDPPALKQSRPDHPYRTVGCVFNHRTFYANSQ 462
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A6H5JSK4_9PHAE (CEP76-C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK4_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.920e-43 Identity = 89/162 (54.94%), Postives = 105/162 (64.81%), Query Frame = 1
Query: 1 QVTIVEGRALVGELADERTMDSAPYNFAVDLQFNGQRARTKNEVRCCVEPKFGEEAFAFVLREAHELPVNAGGWATFLQVNMPLHVVLTKHKAHR----------RAHAHIVNGEGFATANHLTNETCSTGAIKQE----------------VIGTAEVDWR 408
+VT+VEGRALVGELA+ERT SA YNF+VDLQFN QRART+NEVRCCVEP FG E F FVLREAHELPV AGGWA+FLQ ++PLHV LTKHK R ++ A VNG+G A + A + E ++G+AEVDWR
Sbjct: 139 KVTVVEGRALVGELANERTTSSALYNFSVDLQFNAQRARTRNEVRCCVEPSFGSEGFVFVLREAHELPVTAGGWASFLQTDLPLHVALTKHKVSRIRPRPLDPPVQSGAGAVNGDGDGGAPGARGCQAAVAAEEDEHPVYALFSKDVSRRGELVGSAEVDWR 300
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Match: A0A2G8L1X5_STIJA (Putative centrosomal protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L1X5_STIJA) HSP 1 Score: 172 bits (435), Expect = 3.720e-43 Identity = 104/271 (38.38%), Postives = 140/271 (51.66%), Query Frame = 3
Query: 522 GILHVRLEIVA-PREVSSFPFTVADVTRALTLQARIHIIRHEER-RDFYLYADAWWKSFTSVSKTLRKRPVKIFAEDEQGQHRCVCSFVHPYRRGRLLPTPRHAARFISLLPFQRRPCVGE-QHVQSWNSPHSFLAAGRGDASDHALLLCSLLLGFGLDALVCIGRVHATEEAEGEETDLKGRGIEAGGNKTRQGEETEHIWVCTFSAPRSDKKAFFWETLTGQRFSMFGPRSHQGIRQGKKASKVVAVSPHHFSRVSCMFNHREFFANKQ 1325
GI+ V+LE++ P+++ S + Q + R ER R F +YA WWK + + +T + R VKIFA+DE +R VC +V P R GRLL TPR AARFIS++ F+R VG Q + WNS H+FL RGD DHA+LLC+L LGFGL+A VC+G T +KG H WV T S D FWE+L+G R+ HQ + S + + F + C+FNHR F+AN Q
Sbjct: 237 GIIEVKLEVLPIPQQILS--------NEVIATQVNLERSRVSERERLFLVYAKQWWKEYLQIRETHQNRLVKIFAQDENAANRFVCLYVKPLRAGRLLDTPRQAARFISVIGFERSSTVGGGQPKEQWNSSHAFLCKNRGDCEDHAILLCNLFLGFGLNAFVCVG------------TKVKG---------------AAHTWVVTISP---DGLVTFWESLSGHRYI------HQPVNPDDPPSVQLPRPQYPFRTIGCIFNHRTFYANCQ 463 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig116.1315.1 >prot_F-serratus_M_contig116.1315.1 ID=prot_F-serratus_M_contig116.1315.1|Name=mRNA_F-serratus_M_contig116.1315.1|organism=Fucus serratus male|type=polypeptide|length=138bp MDSAPYNFAVDLQFNGQRARTKNEVRCCVEPKFGEEAFAFVLREAHELPVback to top mRNA from alignment at F-serratus_M_contig116:395118..406854- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig116.1315.1 ID=mRNA_F-serratus_M_contig116.1315.1|Name=mRNA_F-serratus_M_contig116.1315.1|organism=Fucus serratus male|type=mRNA|length=11737bp|location=Sequence derived from alignment at F-serratus_M_contig116:395118..406854- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig116:395118..406854- >mRNA_F-serratus_M_contig116.1315.1 ID=mRNA_F-serratus_M_contig116.1315.1|Name=mRNA_F-serratus_M_contig116.1315.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig116:395118..406854- (Fucus serratus male)back to top |