mRNA_F-serratus_M_contig1155.1277.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 662 bits (1709), Expect = 7.680e-220 Identity = 367/759 (48.35%), Postives = 488/759 (64.30%), Query Frame = 1
Query: 1 DMNAAAREAVDLAFRIGSATVDLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQM--VSPTIRSPPI---KQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLGVWICTGEVGRPKEA 2262
D++ +A EA LA IGS D S DL EELP+ V KTLKAI + VET+K+N+EE+ L++RC YITAC ++K + S +APL+ C+ + ERCS+R + R +++ D +I L + D+GLA +A LE + D++ + + + S P K AAVP AP+ K WHVER AM + + L + VV + G SG+GKTT ++IVRS + RE F DGIVWL V+ GA+ RL +LM+QLA +E+I VG P++SED A Y+K+R++E GR L+CLVVADNVWE +VVSKL +TGMWVL++TRD +V R+ K VV++ L A VL+RAA L + RLPD A+++++LCG +AMD+AFVG WS VRGRHDP +WSDA ++I +++ K VG S E A R+AIL GFE L I E V++LYLSLAVMPDGH F+ D+AVLLYDR + D A+A +V LERW+I+RS G YRMHDAH FAR L+DR H++ PAL RWT+++SSLD LR+ DR+ LK LW A+E +GGDGW RPYE+AL M +SD L R + EAV F E Q LE A+ WRRLL +EK LG DHPFV+NT L AERLGN++EA +W ++E E L LA A++ + + SGL + D+DDA S +A P D + E LLR L++ E LG E +Q+ TL QLGV E GR EA
Sbjct: 4 DISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVD-VAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEK-VGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSGL-EADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGV--SAREAGRLDEA 757
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 620 bits (1600), Expect = 4.710e-203 Identity = 358/773 (46.31%), Postives = 472/773 (61.06%), Query Frame = 1
Query: 22 EAVDLAFRIGSATVDLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATY-IAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATL--------------------------EATIHDLRA--QMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDK-LCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLGVWICTGEVGR 2250
E +A ++GSA D+ VADL EELP+ VL+TL+ I KVET+K N E++T L +RC YITAC I+K + Y +APLE C+ VE+ VER +R I R L++ D DI L RL D D+ LA +A+L E +L A + + + PP K A VPK P K WHVER +F+ L + P +VG+VGDSGAGKTTA S IV S RE F DGIVWL V+ G D L LM+QLA +EDI VG RP+ S+DG AYVK++++ GG+ L+CLVVADNVWE +VVS+L +TGMW+L++TRD LV RA + V ++ L A VLRRAA L + RLPD A +++ELCG +AMDLAFVG WS VRGR D AWSDA + +++ K G + E R R+AIL AGFE L I E V++LYLSLAV+PDGH FT D+AVLLYDR+ D A+ +V+ LERWTI+RSV YRMHDAH+ FAR +L+DR ++ PA+ R + ISSL+ LR+ +R+ LK LW+ ++ VGGDGWA RPYE+AL ++++S+ L R+++EAVA F E Q A WRRLL +E+ LG DHP+V+NT L CAE NV+EA++W +++ +AL LA A+ S+ G +DDA S LA V L P + E LLR LEI +L ++DVQ+ + LGV C E GR
Sbjct: 11 EVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRH--GYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKG-GVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSK-HVGSEAAGLDDAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGV--CIREAGR 777
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 577 bits (1486), Expect = 2.090e-188 Identity = 330/747 (44.18%), Postives = 456/747 (61.04%), Query Frame = 1
Query: 49 GSATVDLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMV----------SPTIRS----------PPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVV-IEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRT-RDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLGV 2223
G+ D+ + + + S+ LP+ VLKTLKA+ L +RC YIT CVI++ ++ S PL +C+ V VERCS+R + R L++ D E+I L +RL D D+ LA +AT+ + DL+A + S T+ + P A VP P K WHVER M + + L E P++VG+VGDSG+GKTTA ++IVRS + RE F DGIVWLSV+ GA +RL ALMM LA +EDI VG RP +DGAAY ++RMQ GG+ L+CLVVADNVWE V+SKL +TGMWVL++TRD LV A VV ++ L + A VLRRA+ L + RLPD A+E+VELCG +AMD+AFVG WS VRGR D AWSDA + S++ ++ S +V RA R+A+L AGFE L I E + +LYLSLAV+PDGH FTA D+ LLYDR D + E++++TLERW+ LR+ G YRMHDAH+ FAR ++DR +++ PA+ RWT +SSLD LR+ D F LK LW A+ +GG+ W RPY AL+ M++S+ L +S++++ F + QG + A+ RR+L +++ LG DHP + TL+ LV CAERLGN +E +W+ E L LA ++ ++D+G +D VDDA + +A + L P+D E L+R LEI E KLG++DV + L+ LGV
Sbjct: 6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGSS-GLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRVSD----NVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVD-GVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGV 746
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 1.350e-172 Identity = 295/588 (50.17%), Postives = 383/588 (65.14%), Query Frame = 1
Query: 505 KQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMND-SDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPN--DMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLGVWICTGEVGRPKE 2259
K VPK P K W+V+R M +FE L + P++VG+VG SG+GKTT S+ VRS + +E F DGI WLSV+ GA++RLS+LM+QLA YEDI VG RPTSS+D AAY+++RM++ GG+ L+CLVVADNVWE EVVSKL +TGMWVL++TR++TLV A + V ++ L A VLRRAA L ++P A++++ELCG +AMDLAFVG WS VRGR D AWSDA++ + ++ K VGS + + R R+AIL AGFE L I E V++LYLSLAV PDGH FT D+AVLLYDR+ D A+ +V TLERWT+LRS G YRMHDAH+ FAR TL+D +++ PA+ RW IS L+ LR+ D + LK LW A+E VGGDGW +R Y AL M+ L RQ++ A+A E E A+ WRRLL +EK LG DH V+ + + L CAE+LG V EA WR +E EAL LA A+V SQ DSG ++ +D A +A + + P D ++ E LLR LEI E LG ED+ + TLYQLG IC E GR +E
Sbjct: 32 KLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGK-VGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVE-GLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLG--ICLREAGRLEE 615
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 536 bits (1381), Expect = 6.130e-171 Identity = 309/676 (45.71%), Postives = 413/676 (61.09%), Query Frame = 1
Query: 13 AAREAVDLAFRIGSATVDLASIVADLSEELPIASTVL-------KTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQM--------------------VSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRM---------HDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVE 1932
AA E L ++GSATVD + +A+L E+LP VL KTL AI VE +++N+EE+ TL +RC Y+TACV++K ++ + P+E+CL ELVERC R + R L + D E+I + + D D+ LA +A LE DL A + + + P K A +PKA P+ K WHVER M +FE L P +VG+VGDSG+GKTTA S+IVRS + R+ F DG+VWL+V+ GA+DRL +LM+QLA E++ G RP +S+DGAAY+K +MQ GG+ L+CLVVADNVWE EVV KL +TGMWVL++TRD LV + + V ++ + A VLR+A+ L + RLPD A++++ELCG +AMDLAFVG WS VRGR D AWSDA + +++ K G S T VE R A R+A+L AGFE L E V++LYLSLAV+PDG FT D+AVLLYDR + D A+A +V+ LERW++LRS+ G YRM HDAH+ FAR L+DR ++ PAL RWT+ ISSLDTLR+ +++ LW +E VGGDGW RPYE ALA M DSD L SV AVA F + EEA RRLL + +G P+ ++ ++ L E
Sbjct: 8 AAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVG---GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDA-RRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVG---PYSLSVIRSLHE 676
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 454 bits (1169), Expect = 1.090e-140 Identity = 305/802 (38.03%), Postives = 408/802 (50.87%), Query Frame = 1
Query: 1 DMNAAAREAVDLAFRIGSATVDLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRA--------------------QMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNGKYRM---------HDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSD------------KLCRQSVEAVALFLEV------QGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLGVWICTGEVGRPKEAE 2265
+ + AA E LA ++GSATVD + VADL E+LP N+EE+ TL +RC ++T CVI+K ++ ++P+E+CL ELVERC R + R L + D + I + + D ++ LA +A LE DLRA ++++ + P K A +PK+ P+WK WHVER + +FE L + P +VG+VGDSG+GKTTA S+IVRS EDRL +LM+QLA YE+I G RP +S+DG AY+K RM GG L+CL V DNVWE EVV +L + GMWVL++TRD LV + V + L A VLR+AA L + RLPD A++++ELCG +AMDLAF G S VRGR D AWS A + + +++ K T VE R A R+A++ AGF L I E V++LYLSLAV+PDG FT D+AVL+YDR + D A+A +V+ LERW+ L S+ G YRM HDAH+ FAR L+DR + PAL RWT+ ISS+DTLR E++ LW E VGGDGW I RPYE ALA + DSD K+ S+ + E+ G LEEA R L + LG H V TL L C G +A R LA A+L P + E+LL LEI+E + + L+ LG C + GR +AE
Sbjct: 4 ESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSN-------------------EDRLPSLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDA-RRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLD-LSGCVRAAGQFAQA--------------------------------XXXXXRCLATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGR--CMRQAGRMDKAE 728
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 436 bits (1120), Expect = 8.900e-138 Identity = 262/600 (43.67%), Postives = 352/600 (58.67%), Query Frame = 1
Query: 151 VETIKSNKEEITTLKKRCDYITACVIIKHKR-FPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKAREFFPDGIVWLSVDCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGA-AYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSVNG-KYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEK---HNLGGDHPFVVNTLKYLVE 1932
VET+ ++E+ L+KRC Y+TAC+I K + P A ++PLE C+++ E+ VER +RT ++ + + AR ++ +A E I L PPIK+A VP+ P K WHVER T + E L E P++VG+VGDSGAGKTTA +++VRS RE F DGIVWL+V+ GA RL +LM+QLA EDI +VG P S A AY+K+RM+ GG+ L+CL VADNVWE EVVS L TGM VL++TR LV A PV ++ L + A VLR AA L RLPD A+++++LCG +AMDLAFVG WS VRGRHD AWSDA A + +++ K G V+ R R+AIL AG E L I E V++LYLSLAV+PD D+A+LLYDRD T D + +++ LERW++LRS KY MHD + FAR +L+DR ++ AL RW +ISSLDT+R+ + LK W +E VGG+GW P E ALA M+D + L ++S+ AVA E E+A+ W R L + +L GD L+ L E
Sbjct: 5 VETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRT--------------MEQMVQNQAAARKEL----LANQEIIIDRLP---------KPPIKKAYVPQGTPTRKSWHVERHVTET-VVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDI----VDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLDGDDEHRFRALRALEE 572
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 425 bits (1093), Expect = 5.660e-130 Identity = 282/819 (34.43%), Postives = 420/819 (51.28%), Query Frame = 1
Query: 13 AAREAVDLAFRIGSATVDLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRA---QMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIV------------------RSPKAREFFPDGIVWLSVDCG--AEDRLSALMMQLALKFYEDIARKVGERPTSSEDG--AAYVKR--RMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYD----RDLTDLDLAAAEKIVQTLERWTILRSVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALD---------------LAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREE----------------------KLLRCVLEILEDKLGKEDVQMVPTLYQLGVWICTGEVGRPKEAE 2265
A EA + ++GS D+ +L E+P+ VLKTLKAI + E ++SN E + L++RC Y+TACVI+K ++ S +APLE C+ E+ + RCS+R RC ++ D +++ +L R+ D+GLA +A+L+A + DL+A ++++ + AAVP P+ WHV R + + ++E L + PQVVG+VG SG+GKTT + IV R + RE F DG+VWL V G + +R+ ALM QLA +ED+ G P +S G +A++ R + GR RCLVVAD+VWE +++ +LR TGMWVL T+RD LV+R V ++ L A +LR AA L LP AA +++E C MA L FVG WS V+G D + W++A+++I +++ G + + S E R AIL AGF L + + LYLSLAVMPDG F A ++AV L+D + A K+V LE+W ++ +RMHDAH+ FAR L ++A AL RW F S LDT+R+ D FE+ LW A E +GG+ W ++RPY AL S+ DS C S++AV F + E RLLR++K + +H V +TL+ L+ CA L +A+ R+E +D L A ++L + + D+A A+ + D R E ++ + L I ED G E +++ TL+ L V C + G P + E
Sbjct: 51 APEEAARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRK-RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQK-DAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVDAAWENRSNTASSPPRLVAKRLLERGQQLAITRRPDEAHEAISEALRLQEERSGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKEDLYGLEHLRLTVTLHNLAV--CALKRGEPGDVE 863
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 357 bits (916), Expect = 4.460e-103 Identity = 258/758 (34.04%), Postives = 385/758 (50.79%), Query Frame = 1
Query: 43 RIGSATV--DLASIVADLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIVRSPKA-----------------------REFFPDGIVWLSVDCG--AEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVE-LCGFMAMDLAFVGSWSIVRGRHDPQAWSDALASIHSQLPKTVGSSTSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDR---DLTDLDLAAAEKIVQTLERWTILR-SVNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVEAVALFLEVQGHLEEAALHWRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAEQWRKEEGEALDLAAAKVLSQIDSGLMDTDVDDALSYRMLAVHVARLTPNDMSREEKLLRCVLEILEDKLGKEDVQMVPTLYQLG 2220
R+G +TV +A+ + ++ P+ + + L V+ NKEE+ L +RCD IT VI K K + ++PL+ C+ ++E+ +R + + R + R+D +DIQ L R+ MGLA + + + D+R Q+++ P K A VP P + WH R ++++ L +EP V + G SGAGK+TA + +VR+ K R F DG+V+L V G A DRL LM +LA +ED+ +K P + E G +YVK+ M RCLVVAD+VWE VV+KL++TGMWVL+TTR +V+ P + V ++ L A VLR AA L +RL D AM++++ +CGF+AMD+AFVGSWS+VR D AW++A++ I+ + + + +R IL AGF+ LG EE G ++LY+++AV PDG+ F +D+AVLL D D + A + ++ LERW +L + +GKYRMHD H FAR + D+ ++ P + RWT IS LD RD + L +W A+E VGGDGW RPY++ L SM SD +++ VA E + L E R +L + G D + L YL G + E + ++ GE D + S +D G LS A V + + E LR L E+ +Q V TL +LG
Sbjct: 94 RLGISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVR-QILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILS-GDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTK----KRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVE--PNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMNDSQVKRL----GILRAGFDYLG-EEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMG-SDCSKSHALDVVAELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFDASVKP--SALDGGAAQAQ----LSSIYKAYGVCATAAGEWTEGESWLRKALHAQENGGLGTSLQTVSTLLELG 831
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 351 bits (901), Expect = 2.040e-98 Identity = 239/649 (36.83%), Postives = 350/649 (53.93%), Query Frame = 1
Query: 85 DLSEELPIASTVLKTLKAIHSKVETIKSNKEEITTLKKRCDYITACVIIKHKRFPSYATYIAPLEQCLLDVEELVERCSQRTTIFRCLRSRKDTEDIQSLYRRLGDARDDMGLASMATLEATIHDLRAQMVSPTIRSPPIKQAAVPKAAPMWKHWHVERAKAMTDIFERLCIEEEPQVVGVVGDSGAGKTTAVSQIV--RSPKAREFFPDGIVWLSV--DCGAEDRLSALMMQLALKFYEDIARKVGERPTSSEDGAAYVKRRMQEDDGGRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEALPSDSAAMVLRRAANLQDDERLPDAAMEIVELCGFMAMDLAFVGSWSIVRGRH----DPQAWSDALASIHSQLPKTVGS-STSPTSVEPRRACNRQAILLAGFECLGIEEVGESVKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRS-VNGKYRMHDAHAAFARTTLVDRCHIQAPALSRWTKFISSLDTLRTRDRFELKRLWSALECVGGDGWAIARPYEQALASMNDSDKLCRQSVE-AVALFLEVQ------GHLEEAALH----WRRLLRLEKHNLGGDHPFVVNTLKYLVECAERLGNVDEAE 1968
++ P+ + + L V+ NKEE+ L +RC+ IT VI K K + + PL++C+ ++E+ ER R + R + R+D EDIQ L +R+ D MGL+ + + + A++ P K A VPK AP K +HV R + + + L + P + + G SGAGKTT+ + +V R + R FPDG+VWL V + G DRL +LM LA + +ED+ + + PT +DG +YV++ + ++ LRCLVVAD+VWE VV KLR+TGMWVL+TTR + + P + VV++ L A VLR AA L ERL DA+M+++E+CG +AMD AFVGSW+ VR + +AW + + +Q+ G T + RA NR A+L AGF+ +G E+ ++LY+ LAV P+G F +D+AVLL + ++ A+ + LERW +LR+ + KYR HDAHA FAR L+DR ++ PA+ RWT+ IS LD + F L +W ALE VGG GW RPY+ L M S+ + AV + + + G L E +RR L +E+ LG D V TL+ L C G EAE
Sbjct: 32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARL------QPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTG-DDGVSYVRKIVSQEK----LRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGE--PEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFKYIGRED--PLAQELYVKLAVFPEGFLFGESDAAVLLENEEV-------AKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDRNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNPATSYATSGAVGVVMNLYRGARKLGELAEIMKRVEPLFRRALEIEEATLGPDDIQVAVTLQELGLCMRETGRPGEAE 658 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1155.1277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1155.1277.1 >prot_F-serratus_M_contig1155.1277.1 ID=prot_F-serratus_M_contig1155.1277.1|Name=mRNA_F-serratus_M_contig1155.1277.1|organism=Fucus serratus male|type=polypeptide|length=995bp MNAAAREAVDLAFRIGSATVDLASIVADLSEELPIASTVLKTLKAIHSKVback to top mRNA from alignment at F-serratus_M_contig1155:172536..177547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1155.1277.1 ID=mRNA_F-serratus_M_contig1155.1277.1|Name=mRNA_F-serratus_M_contig1155.1277.1|organism=Fucus serratus male|type=mRNA|length=5012bp|location=Sequence derived from alignment at F-serratus_M_contig1155:172536..177547+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1155:172536..177547+ >mRNA_F-serratus_M_contig1155.1277.1 ID=mRNA_F-serratus_M_contig1155.1277.1|Name=mRNA_F-serratus_M_contig1155.1277.1|organism=Fucus serratus male|type=CDS|length=5970bp|location=Sequence derived from alignment at F-serratus_M_contig1155:172536..177547+ (Fucus serratus male)back to top |