mRNA_F-serratus_M_contig1155.1276.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 556 bits (1433), Expect = 3.950e-171 Identity = 307/647 (47.45%), Postives = 414/647 (63.99%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRSPPI-----KQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQMGTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYEEA 1929
+SR + D+ +I L + D+GLA IA LE + D+ + + QR + K A VP P+ K WHVER M + + L +R VV + G SG+GKTT ++IVRS + R+ F DGIVWL V+ GA+ RL +LM+QLA +E++ VG P++SED A Y+K+R++ + R L+CLVVADNVWE +VVSKL +TGMWVL++TRD +V R+ K VV++ L A VL+RAA+L + RLPD A+++++LCG +AMD+AFVGRWS V GR+DP +WSDA ++IR+++ K+ G S E A R+AIL+ GFE L I ER+++LYLSLAVMPDGH F+ D+AVLLYDR + D A+A +V LERW+I+RS YRMHD H FAR L+D VR AL RWT+++SSLD LR+ DR+ LK LW A+E +GGDGW K RPYE+AL M +SD L R + EA+ F E Q E A+ WRRLL VEK +LG DHPFV+NT L AERLGN++EA +W ++E E L LA ++ + + SG + D DDA S +AA P D + E LLR +L++ E LG E +Q+ TL QLGV GR +EA
Sbjct: 114 VSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRID-QRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKV-GHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPLALARMNALVRSG-LEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRLDEA 757
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 541 bits (1395), Expect = 8.860e-167 Identity = 296/585 (50.60%), Postives = 380/585 (64.96%), Query Frame = 1
Query: 178 KQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHD-SDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQM-GTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYEE 1926
K VPK TP K W+V+R VM +FE L + P++VG+VG SG+GKTT S+ VRS + ++ F DGI WLSV+ GA++RLS+LM+QLA YED+ VG RPTSS+D AAY+++RM+ G + L+CLVVADNVWE EVVSKL +TGMWVL++TR++TLV A + V ++ L A VLRRAA+L ++P A++++ELCG +AMDLAFVGRWS V GR D AWSDA++ +R ++ K+ S E R A R+AILRAGFE L I ER+++LYLSLAV PDGH FT D+AVLLYDR+ D A+ +V TLERWT+LRS YRMHD H+ FAR LMD+ VR A+ RW IS L+ LR+ D + LK LW AVE VGGDGW K+R Y AL M L RQ++ ALA E +E A+ WRRLL +EK LG DH V+ + + L CAE+LG V EA WR +E EAL LA +V SQ SG++ G D + L+ V + D + E LLR +LEI E LG ED+ + TLYQLG+CL GR EE
Sbjct: 32 KLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDA-RRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVLKSYRSLASCAEQLGQVGEAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANGLASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRLEE 615
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 540 bits (1390), Expect = 1.030e-166 Identity = 306/664 (46.08%), Postives = 422/664 (63.55%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRS-------------------PPIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVV-IEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRT-RDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQM-GTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYEEA 1929
+SR + D+E+I L +RL D D+ LA IAT+ + DL A + + T+++ P ATVP TP K WHVER VM + + L E P++VG+VGDSG+GKTTA ++IVRS + R+ F DGIVWLSV+ GA +RL ALM+ LA +ED+ VG RP +DGAAY ++RMQ +G + L+CLVVADNVWE V+SKL +TGMWVL++TRD LV A VV ++ L + A VLRRA++L + RLPD A+E++ELCG +AMD+AFVGRWS V GR+D AWSDA +RS+I + S S ++R A R+A+L+AGFE L I ERI +LYLSLAV+PDGH FTA D+ LLYDR D + E++++TLERW+ LR+ YRMHD H+ FAR +MD VR A+ RWT +SSLD LR+ D F LK LW AV +GG+ W RPY AL+ M +S+ L +S+++L F + QG ++ A+ RR+L V++ LG DHP + TL+ LV CAERLGN +E +W+ E R L LA V++ ++ +G++ G D+ +AL+ + A+ + AP+D E L+R +LEI E KLG++DV + L+ LGV + GR +EA
Sbjct: 100 LSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIER---SRVSDNVWDIR-AVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYCAERLGNAEEMTEWQAELRRVLPLAVVRMQLRLDAGEVDGVDDANALNSI--ASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRLDEA 757
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 544 bits (1401), Expect = 4.450e-166 Identity = 312/669 (46.64%), Postives = 413/669 (61.73%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATL--------------------------EAMIHDLSAQMATLGTQR-SPPIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDK-LCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQ-IGSGQMGTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYE 1923
ISR + D+ DI L RL D D+ LA IA+L E +L A+ T+ Q PP K A VPK TP K WHVER V +F+ L + P +VG+VGDSGAGKTTA S IV S R+ F DGIVWL V+ G D L LM+QLA +ED+ VG RP+ S+DG AYVK++++ +G + L+CLVVADNVWE +VVS+L +TGMW+L++TRD LV RA + V ++ L A VLRRAA+L + RLPD A +++ELCG +AMDLAFVGRWS V GR D AWSDA +R+++ K G + E R R+AIL+AGFE L I ER+++LYLSLAV+PDGH FT D+AVLLYDR+ D A+ +V+ LERWTI+RS+ YRMHD H+ FAR +LMD VR A+ R + ISSL+ LR+ +R+ LK LW+ V+ VGGDGWA RPYE+AL ++ +S+ L R+++EA+A F E Q + A WRRLL VE+ LG DHP+V+NT L CAE NV+EA++W +++ +AL LA + S+ +GS G D DA S LAA V P + E LLR +LEI +L ++DVQ+ + LGVC+ GR +
Sbjct: 114 ISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKG-GVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYVLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLD--DAGSLASLAATVITLHPGERGEAEMLLRRSLEIKMAELDQDDVQVAVVQHDLGVCIREAGRLD 779
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 5.140e-137 Identity = 265/562 (47.15%), Postives = 353/562 (62.81%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRSP-------------------PIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRM---------HDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVE 1605
++R + D+E+I + + D D+ LA +A LE DL+A + +GT ++ P K A +PKATP+ K WHVER VM +FE L P +VG+VGDSG+GKTTA S+IVRS + R F DG+VWL+V+ GA+DRL +LM+QLA E+V G RP +S+DGAAY+K +MQ +G + L+CLVVADNVWE EVV KL +TGMWVL++TRD LV + + V ++ + A VLR+A++L + RLPD A++++ELCG +AMDLAFVGRWS V GR+D AWSDA +R+++ KI G S T VE R A R+A+L+AGFE L ER+++LYLSLAV+PDG FT D+AVLLYDR + D A+A +V+ LERW++LRSI YRM HD H+ FAR LMD VR AL RWT+ ISSLDTLR+ +++ LW VE VGGDGW RPYE AL M DSD L SV A+A F + +EEA RRLL + +G P+ ++ ++ L E
Sbjct: 122 MTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVG---GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDA-RRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVG---PYSLSVIRSLHE 676
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 3.310e-120 Identity = 240/535 (44.86%), Postives = 321/535 (60.00%), Query Frame = 1
Query: 16 FLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRSPPIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGA-AYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSI-NRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEK---HDLGGDHPFVVNTLKFLVE 1605
F+ R+ + ++ + + AR ++ +A E +I L PPIK+A VP+ TP K WHVER V + E L E P++VG+VGDSGAGKTTA +++VRS R+ F DGIVWL+V+ GA RL +LM+QLA ED+ +VG P S A AY+K+RM+ +G + L+CL VADNVWE EVVS L TGM VL++TR LV A PV ++ L + A VLR AA+L RLPD A+++++LCG +AMDLAFVGRWS V GR+D AWSDA A +R++I KI G V+ R R+AIL+AG E L I ER+++LYLSLAV+PD D+A+LLYDRD T D + +++ LERW++LRS KY MHD + FAR +LMD VR AL RW +ISSLDT+R+ + LK W VE VGG+GW + P E AL M D + L ++S+ A+A E +E+A+ W R L V L GD L+ L E
Sbjct: 57 FVERRKKRTMEQMVQNQAAARKEL----LANQEIIIDRLP----------KPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDI----VDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKASTIWHRSLGVSTWWGQSLDGDDEHRFRALRALEE 572
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 375 bits (963), Expect = 1.270e-106 Identity = 258/698 (36.96%), Postives = 349/698 (50.00%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLG-----------------TQR--SPPIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVDCGAEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLTDLDLAAAEKIVQTLERWTILRSINRKYRM---------HDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDK------------------LCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQMGTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYEEAAEITKRACRL 1959
++R + D++ I + + D ++ LA +A LE DL A + + T R P K A +PK+TP+ K WHVER V+ +FE L + P +VG+VGDSG+GKTTA S+IVRS EDRL +LM+QLA YE++ G RP +S+DG AY+K RM +G L+CL V DNVWE EVV +L + GMWVL++TRD LV + V + L A VLR+AA+L + RLPD A++++ELCG +AMDLAF GR S V GR+D AWS A + +R+++ K T VE R A R+A+++AGF L I ER+++LYLSLAV+PDG FT D+AVL+YDR + D A+A +V+ LERW+ L SI YRM HD H+ FAR LMD V AL RWT+ ISS+DTLR E++ LW E VGGDGW RPYE AL + DSD +S+ L L + G EEA R L + LG H V TL L C G +A LA A+ P + E+LL LEI+E + + L+ LG C+ GR ++A + +R ++
Sbjct: 96 MTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSN-------------------EDRLPSLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDA-RRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDPHRPTLLDMPVTKVRPYSLSVIRSLHELGLGYKHAGCLEEAEEVLRGCLVIGGTLLGFTHVTVAKTLD-LSGCVRAAGQFAQAXXXXXR--------------------------------CLATREAKLGPRGLVETEELLARRLEIVEASTALDHEHVADVLFDLGRCMRQAGRMDKAEGLLRRCLKI 737
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 362 bits (928), Expect = 2.800e-102 Identity = 246/673 (36.55%), Postives = 357/673 (53.05%), Query Frame = 1
Query: 31 DREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRSPP--IKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIV------------------RSPKARDFFPDGIVWLSVDCG--AEDRLSALMIQLALKFYEDVARKVGDRPTSSEDG--AAYVKRRMQGDNGDRPL-RCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYD----RDLTDLDLAAAEKIVQTLERWTILRSINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQMGTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGK-EDVQMIPTLYQLGVCLWNQGRYEEAAEITKRACRL 1959
D +++ +L R+ D+GLA IA+L+A + DL A +A + Q + P + A VP P+ WHV R +V+ ++E L + PQVVG+VG SG+GKTT + IV R + R+ F DG+VWL V G + +R+ ALM QLA +ED+ G P +S G +A++ ++G RCLVVAD+VWE +++ +LR TGMWVL T+RD LV+R V ++ L A +LR AA+L LP AA +V+E C MA L FVGRWS V G +D + W++A+++I +++ + G + + S E R AILRAGF L + G + LYLSLAVMPDG F A ++AV L+D + A K+V LE+W ++ +RMHD H+ FAR L VRASAL RW F S LDT+R+ D FE+ LW A E +GG+ W +RPY AL S+ DS C S++A+ F + +E RLLRV+K D +H V +TL+ L+ CA L +A+ R+E +D AA + S S L A R P++ + + AL + E++ G E +++ TL L + L + RY E E+ +R R+
Sbjct: 167 DNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEFGINECAWEVTHDVALRLLRVQK-DAAVEHAEVRHTLESLIHCANALNLNSDADAHRRELSLMVD-AAWENRSNTASSPPRLVAKRLLERGQQLAITRR--PDEA---HEAISEALRLQEERSGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRI 830
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5L0N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N2_9PHAE) HSP 1 Score: 330 bits (845), Expect = 9.840e-89 Identity = 279/866 (32.22%), Postives = 372/866 (42.96%), Query Frame = 1
Query: 34 REDIQSLYRRLGDARDDIGLASI-ATLEAMIHD---------------LSAQMATLGTQ--RSPPIKQATVPKATPMGKHWHVERAKVMTDIFERLC------------------------------IEERPQVVGVVGDSGAGKTTAVSQIVRSPKARDFFPDGIVWLSVD--CGAEDRLSALMIQLALKFYEDVARKVG------------------------------------------------------DRPTSSEDGAAYVKRRMQGDNGDR---PLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVMELCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKI--------VGSSTS--------------------------------PTSVELR---------------------------RACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDRDLT---DLDLAAA----------------EKIVQTLERWTILRSINRK------------YRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVK---VLSQIGSGQMGT---------------------------DEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLGVCLWNQGRYEE 1926
+++I L R+ DA ++GLA I A + ++ D L+ Q L Q RSPP +A VP P + WHV R V+ + L E P+VVG+VG+SG GKT ++IVR P+ ++F DG+VWL V+ G DRL +LM +LA YE+V K G G G R PLRCLV DNV E EVV+ L +TG+WVL+TTRD ++ R KPVVI L A VLRRA++L DE P A E++ELCG +DLAFVGRWS VCG DP AW +A SIR+++ + SS + P SV R R+AILRAGF L G + + LYLSLAV+PDGHEFT D+AVLL+ D +AAA ++++ LE IL + + +RMH+ H+AFAR L+D ++ A+ RW F+SSLD + D F L RLWSAVE VGG GW RPYE AL ++ + D LCR + A+A F +G ++ A+L WRRLL VE+ P V+ + LV AE G +EA WR+ RE L+LA VK V + G+ G D A LA ++ R P+ E +LR ALEI + G +D Q+ TL +LGVC+ GR +E
Sbjct: 201 KDEIADLNGRVLDAAREMGLAGILAVFKGVLEDTGGGYGSSPGGISDVLTQQEVDLARQPKRSPP--RARVPSLLPRRESWHVRRELVIGTVLRSLLSAPGGSNSRXXXXXXXXXXXXXXXXXXXXXXEAGPRVVGLVGESGTGKTATAAEIVRGPEVLEYFSDGVVWLPVNEGDGDRDRLPSLMKRLARIMYEEVGIKHGFGAPPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGHGGPRQRRPLRCLVAVDNVCEAEVVATLAETGVWVLLTTRDWDVIPRVGGKPVVIGRLLETDADWVLRRASELPGDEPPPAGARELIELCGRTVLDLAFVGRWSTVCGSKDPMAWRNAADSIRAELNNLELTREDDDARSSVTVAGKVXXXXXXXXXXXXXXXXXXXXXXIEDGAPASVITGSEXXXXXXXXXXXXXXXXXXXXXXXHGRESQRKAILRAGFRDLVSVAGDDDSRLLYLSLAVLPDGHEFTVKDAAVLLHGDGSARCGDGIVAAAGGRGXXXXXXXXXXXXRRVLRVLEARGILTASGGRGGRRRSASSPSSFRMHEAHSAFAREILLDCPKILGWAVGRWVGFLSSLDAVLFFDPFALARLWSAVEDVGGKGWRDGRPYETALEAIDNYDPLCRVCLVAVAKFRGAEGDWDGASLMWRRLLTVEQR---AQEPNVMYPVWELVNAAENGGKPEEAAAWRRYGRETLNLAMVKSTMVPPETGARDSGXXXXXXXXXXXXXXXXXXXXXXXXXPKRSADTASVLRSLALNIVRFGPSHGVEAEMMLRRALEIEVARRGPDDPQVAVTLGRLGVCVRQAGRLKE 1061
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 322 bits (826), Expect = 1.170e-87 Identity = 235/660 (35.61%), Postives = 338/660 (51.21%), Query Frame = 1
Query: 4 ISRFFLSRKDREDIQSLYRRLGDARDDIGLASIATLEAMIHDLSAQMATLGTQRSPPIKQATVPKATPMGKHWHVERAKVMTDIFERLCIEERPQVVGVVGDSGAGKTTAVSQIVRSPKA-----------------------RDFFPDGIVWLSVDCG--AEDRLSALMIQLALKFYEDVARKVGDRPTSSEDGAAYVKRRMQGDNGDRPLRCLVVADNVWEHEVVSKLRDTGMWVLITTRDVTLVDRAPCKPVVIEGLPSDSAAMVLRRAADLKDDERLPDAAIEVME-LCGFMAMDLAFVGRWSIVCGRNDPQAWSDALASIRSQIPKIVGSSTSPTSVELRRACNRQAILRAGFECLGIEEGGERIKQLYLSLAVMPDGHEFTATDSAVLLYDR---DLTDLDLAAAEKIVQTLERWTILR-SINRKYRMHDTHAAFARTNLMDYCRVRASALSRWTKFISSLDTLRTRDRFELKRLWSAVECVGGDGWAKARPYEQALTSMHDSDKLCRQSVEALALFLEVQGHFEEAALQWRRLLRVEKHDLGGDHPFVVNTLKFLVECAERLGNVDEAEQWRKEEREALDLAAVKVLSQIGSGQMGTDEDDALSYVMLAAHVARHAPNDMSGEEKLLRCALEILEDKLGKEDVQMIPTLYQLG 1893
++R R+D +DIQ L R+ +GLA + + + D+ +A L Q P K A VP P G+ WH R V ++++ L +E P V + G SGAGK+TA + +VR+ K R F DG+V+L V G A DRL LM +LA +EDV +K P + E G +YVK+ M RCLVVAD+VWE VV+KL++TGMWVL+TTR +V+ P + V ++ L A VLR AA+L +RL D A++V++ +CGF+AMD+AFVG WS+V +D AW++A++ I I + + +++R ILRAGF+ LG EE G ++LY+++AV PDG+ F +D+AVLL D D + A + ++ LERW +L + + KYRMHDTH FAR + D VR + RWT IS LD RD + L +W AVE VGGDGW RPY++ L SM SD +++ +A E + E R +L D G D + L +L G + E + ++ E D A+VK + G LS + A V A + + E LR AL E+ +Q + TL +LG
Sbjct: 193 LARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQILARL--QPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTK----KRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVE--PNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADGMNDSQVKRL----GILRAGFDYLG-EEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSM-GSDCSKSHALDVVAELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFD-ASVKPSALDGGAAQAQ-----LSSIYKAYGVCATAAGEWTEGESWLRKALHAQENGGLGTSLQTVSTLLELG 831 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1155.1276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1155.1276.1 >prot_F-serratus_M_contig1155.1276.1 ID=prot_F-serratus_M_contig1155.1276.1|Name=mRNA_F-serratus_M_contig1155.1276.1|organism=Fucus serratus male|type=polypeptide|length=1421bp MIHDLSAQMATLGTQRSPPIKQATVPKATPMGKHWHVERAKVMTDIFERLback to top mRNA from alignment at F-serratus_M_contig1155:113883..120116+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1155.1276.1 ID=mRNA_F-serratus_M_contig1155.1276.1|Name=mRNA_F-serratus_M_contig1155.1276.1|organism=Fucus serratus male|type=mRNA|length=6234bp|location=Sequence derived from alignment at F-serratus_M_contig1155:113883..120116+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1155:113883..120116+ >mRNA_F-serratus_M_contig1155.1276.1 ID=mRNA_F-serratus_M_contig1155.1276.1|Name=mRNA_F-serratus_M_contig1155.1276.1|organism=Fucus serratus male|type=CDS|length=8526bp|location=Sequence derived from alignment at F-serratus_M_contig1155:113883..120116+ (Fucus serratus male)back to top |