mRNA_F-serratus_M_contig1155.1274.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1155.1274.1
Unique NamemRNA_F-serratus_M_contig1155.1274.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: D7G4U2_ECTSI (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U2_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 4.790e-90
Identity = 147/210 (70.00%), Postives = 175/210 (83.33%), Query Frame = 2 
Query:  104 KTPKGAVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDEDPVPPKM 733
            KTPK AVSDYM++SNRP+S INVFDNL KKIPKAM+QKLLDEL RDGTLK+QEY KARIY+ANQDALP GAG+ S + +R L+QEAK LTS+LE+VS + + T+AR  +L+ QPTD +L  KLA+ A+E+EQ EARN A  AKG G S   GGMK  +  F+KFRALWV RKRNAMDVVDMIADGM+KKPKV+M+MLG+EPDEDP+PPKM
Sbjct:  112 KTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARASSLSCQPTDDELTKKLANCAQELEQAEARNGA--AKGQGRSVAAGGMKTAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEDPIPPKM 319
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A6H5JRD1_9PHAE (Homologous-pairing protein 2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD1_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 6.980e-90
Identity = 153/226 (67.70%), Postives = 184/226 (81.42%), Query Frame = 2 
Query:   56 ASKGGQGAAVAASGGAKTPKGAVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDEDPVPPKM 733
            A K G   A A+    KTPK AVSDYM++SNRP+S INVFDNL KKIPKAM+QKLLDEL RDGTLK+QEY KARIY+ANQDALP GAG+ S + +R L+QEAK LTS+LE+VS + + T+ARV +L+ QPTD +L  KLA++A+E+EQ EARN A  AKG G S   GGMKA +  F+KFRALWV RKRNAMDVVDMIADGM+KKPKV+M+MLG+EPDE+P+PPKM
Sbjct:  209 AGKKGTAGAGASGSAPKTPKAAVSDYMLQSNRPYSYINVFDNLRKKIPKAMVQKLLDELVRDGTLKLQEYGKARIYYANQDALPNGAGDASADKMRTLDQEAKTLTSQLEIVSKQEQQTRARVSSLSCQPTDDELAKKLANSAQELEQAEARNGA--AKGQGRSVAAGGMKAAKQSFNKFRALWVTRKRNAMDVVDMIADGMEKKPKVVMEMLGVEPDEEPIPPKM 432
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A836CJ02_9STRA (Tat binding protein 1-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ02_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.550e-40
Identity = 93/211 (44.08%), Postives = 129/211 (61.14%), Query Frame = 2 
Query:  104 KTPKGAVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDEDPV-PPKM 733
            KTP+ AV DYM ++NRP+S +N+FDNLH+KIP+ M+QK+LD+L + G L  +EY KA IY+ NQ  L    GE     L+ L  E KDL+++            +   ALAAQP D  L+++L +     +  + R A I+    GA A    M   R  F+K R +WV RK  A + VD I+DGM+KKPKV+MD++G++PD D V PPKM
Sbjct:  151 KTPEQAVRDYMRQTNRPYSIVNIFDNLHRKIPRTMVQKILDQLVQSGELLSKEYGKAVIYYCNQTRLEADLGE-----LQALAAEEKDLSAQXXXXXXXXXXXXSDNAALAAQPADDALEEELTALQNANDAEDQRLAGIRG-AQGAGADPAAMSKARTHFNKLRQVWVDRKNAAREWVDRISDGMEKKPKVVMDLMGVDPDADTVVPPKM 355
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A225V1S8_9STRA (Pairing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V1S8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.690e-30
Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 2 
Query:  119 AVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            AV DYM ++NRP+S +NVF+N+H+ I K  +  LLD LT    L  + Y KA+IY+ NQ  LP      S+     LE++ K +T+       E ++ +A + ++ +Q +D DLD  L     E   +E +   +   G  A    G  +A +  F+K+R  WV RKR AMD V+ IADGM+KKPK ++D++G+E DE+
Sbjct:   21 AVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTTLLDNLTAKEELVSKTYGKAKIYYMNQSNLPV----PSEAERLALEEQIKVVTADCVASEQELKSAEATLASIKSQLSDADLDAALKQLDEEAATLEKKMETLDQPGR-APVSPGRKEALKRKFTKYRTAWVSRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEE 214
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A6A3DU84_9STRA (TBPIP domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DU84_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.040e-30
Identity = 77/199 (38.69%), Postives = 114/199 (57.29%), Query Frame = 2 
Query:  119 AVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            AV DYM ++NRP+S +NVF+N+H+ I K  + KLLD L     L  + Y KA+IY+ NQ  LP      S+E    LE++ K +T+       E ++ +A +  + +Q +D DLD  L     E  ++E +   +   G  A    G   A +  F+K+R  WV RKR AMD V+ IADGM+KKPK ++D++G+E D D
Sbjct:  130 AVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQSNLPV----PSEEERLALEEQIKVVTADCAASEQELKSAEATLAGITSQISDADLDAALKQLDEEAAELEKKVETLDQPGR-APVSPGRKNALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKPKAVIDLVGVETDAD 323
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A329RFD1_9STRA (TBPIP domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RFD1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 4.390e-30
Identity = 76/205 (37.07%), Postives = 117/205 (57.07%), Query Frame = 2 
Query:  101 AKTPKGAVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            A+  + AV DYM ++NRP+S +NVF+N+H+ I K  + KLLD L     L  + Y KA+IY+ NQ+ LP      S+E    +E++ K +TS+      E ++ +A +  + +Q +D DLD  L     E   +E +   +   G       G   A +  F+K+R  WV RKR AMD V+ IADGM+KK K ++D++G+E DE+
Sbjct:  112 AEDAEAAVLDYMRKTNRPYSLLNVFENMHRAIAKPSLTKLLDNLVAKEELVSKTYGKAKIYYMNQNNLPV----PSEEERLAIEEQIKTVTSECTASEQELKSAEATLSGITSQISDADLDAALKQLEEEAATLETKVETLDQPGR-VPVSPGRKDALKRKFTKYRTAWVARKRIAMDGVNQIADGMEKKTKAVLDLVGMETDEE 311
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: D0NIU5_PHYIT (Pairing protein 2 family protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NIU5_PHYIT)

HSP 1 Score: 124 bits (310), Expect = 1.000e-28
Identity = 73/199 (36.68%), Postives = 115/199 (57.79%), Query Frame = 2 
Query:  119 AVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            AV DYM ++NRP+S +NVF+N+H+ I K  + K LD L     L  + Y KA+IY+ NQ+ LP      S+E    +E++ K +T++      E ++ +  +  +++Q +D D D  L     E   +E +   +   G  A    G   A +  F+K+R  WV+RKR AMD V+ IADGM+KKPK ++D++G+E DE+
Sbjct:  111 AVLDYMRKTNRPYSLLNVFENMHRVIAKPSLTKPLDNLVVKEELASKTYGKAKIYYLNQNNLPV----PSEEERLAIEEQIKTVTAECTASEQELKSAETTLSGISSQISDADFDAALNQLEDEAAALETKVETLDQPGR-APVSPGRKNALKRKFTKYRTAWVQRKRIAMDGVNQIADGMEKKPKAVLDLVGVETDEE 304
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A484DZL4_BRELC (Homologous-pairing protein 2 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZL4_BRELC)

HSP 1 Score: 122 bits (305), Expect = 4.090e-28
Identity = 75/199 (37.69%), Postives = 113/199 (56.78%), Query Frame = 2 
Query:  119 AVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            AV DYM ++NRP+S +N+F+N+HK I K  + ++LD L     L  + Y KA IY+ NQ+ LP      S+E  + +E E + LT++      E ++ +A + A  AQ +D DL+  L          EA+ A++  K        G     +  F K+R  WV RKR AMD ++ IADGM+KKPK I++++G+E DED
Sbjct:  100 AVLDYMRKTNRPYSLLNIFENMHKGIAKPTLTRMLDNLVVKQELVSKTYGKATIYYLNQNKLPI----PSEEEHKTIEAEIQTLTAECATYEQELKSAKATLAATMAQLSDIDLESALKXXXXXXXXXEAKVASLD-KNTCLPVSPGAKNTLKRNFIKYRTAWVARKRIAMDGINQIADGMEKKPKAILELVGVETDED 293
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A421FAN5_9STRA (TBPIP domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAN5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.780e-28
Identity = 76/199 (38.19%), Postives = 111/199 (55.78%), Query Frame = 2 
Query:  119 AVSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDED 715
            AV DYM ++NRP+S +NVF+NLH+ I K  + KLLD L     L  + Y KA+IY+ NQ+ LP      S+E    LE++ K  T     +  E ++T+A +  + +Q +D DLD  +     E   +E +  A+      A    G   A +  F+ +R  WV RKR  MD V+ IADGM+KK KV+MD+ G+E D +
Sbjct:  117 AVLDYMRKTNRPYSLLNVFENLHRAIAKPSLTKLLDNLVTKEELVSKTYGKAKIYYMNQNKLPV----PSEEERVALEEQIKTTTGDCGALEQELKSTEATLAGITSQISDADLDLAIKQLDEEASTLEKKIEALDRPDR-APVSPGRKDALKRKFTTYRTAWVARKRIVMDGVNQIADGMEKKTKVVMDLCGIETDAE 310
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BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Match: A0A6A4YZN9_9STRA (Homologous-pairing protein 2 homolog n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZN9_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.830e-27
Identity = 73/203 (35.96%), Postives = 117/203 (57.64%), Query Frame = 2 
Query:  122 VSDYMMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIYFANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQALAAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGA------SAGEGGMKATRAGFSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDE 712
            V+ Y+ ++NRP+S +NVF+NLH++I K ++QK+LD L   G + V+ Y K++IY+ NQ  LP      S ++L + E   + +  ++  +   A+  +A +Q L +Q +D DLD  L       E +E +N  ++ K          +   G  +A    F+K+R  WVKRKR  MD +D IADGM+KK K ++D+ G+E DE
Sbjct:  126 VAKYLRQTNRPYSVLNVFENLHRRIGKTILQKILDALAERGEINVKTYGKSQIYYYNQSKLP----RPSADSLAQTEDHIRTVLDEVAALEKAAKDQEAILQGLTSQMSDADLDLAL-------ETLETQNHLLQVKLQQVDKQPVVAVDPGAKEALTKSFTKYRTEWVKRKRIVMDAIDQIADGMEKKRKDVLDLCGVESDE 317
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1155.1274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4U2_ECTSI4.790e-9070.00Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A6H5JRD1_9PHAE6.980e-9067.70Homologous-pairing protein 2 homolog n=1 Tax=Ectoc... [more]
A0A836CJ02_9STRA1.550e-4044.08Tat binding protein 1-interacting protein-domain-c... [more]
A0A225V1S8_9STRA1.690e-3038.19Pairing protein (Fragment) n=1 Tax=Phytophthora me... [more]
A0A6A3DU84_9STRA4.040e-3038.69TBPIP domain-containing protein n=3 Tax=Phytophtho... [more]
A0A329RFD1_9STRA4.390e-3037.07TBPIP domain-containing protein n=2 Tax=Phytophtho... [more]
D0NIU5_PHYIT1.000e-2836.68Pairing protein 2 family protein n=2 Tax=Phytophth... [more]
A0A484DZL4_BRELC4.090e-2837.69Homologous-pairing protein 2 homolog n=1 Tax=Bremi... [more]
A0A421FAN5_9STRA5.780e-2838.19TBPIP domain-containing protein n=2 Tax=Phytophtho... [more]
A0A6A4YZN9_9STRA1.830e-2735.96Homologous-pairing protein 2 homolog n=1 Tax=Aphan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1155contigF-serratus_M_contig1155:3685..8375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.2
Seed ortholog evalue4e-70
Seed eggNOG ortholog2880.D7G4U2
Preferred namePSMC3IP
KEGG koko:K06695
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000280,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006310,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007131,GO:0008134,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0019219,GO:0019222,GO:0019904,GO:0022402,GO:0022414,GO:0022607,GO:0030331,GO:0030374,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0034641,GO:0035257,GO:0035258,GO:0035259,GO:0035825,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045132,GO:0045143,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046966,GO:0046983,GO:0048285,GO:0048518,GO:0048522,GO:0050681,GO:0050692,GO:0050789,GO:0050794,GO:0051026,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0051321,GO:0051427,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070192,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140110,GO:1901360,GO:1901363,GO:1902680,GO:1903046,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.homologous recombination
EggNOG OGsKOG4603@1,KOG4603@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03051
Exons8
Model size1209
Cds size603
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1155.1274.1prot_F-serratus_M_contig1155.1274.1Fucus serratus malepolypeptideF-serratus_M_contig1155 4158..7812 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.204601-UTR-F-serratus_M_contig1155:3684..41571622929052.204601-UTR-F-serratus_M_contig1155:3684..4157Fucus serratus maleUTRF-serratus_M_contig1155 3685..4157 -
1690962683.4283803-UTR-F-serratus_M_contig1155:3684..41571690962683.4283803-UTR-F-serratus_M_contig1155:3684..4157Fucus serratus maleUTRF-serratus_M_contig1155 3685..4157 -
1622929052.3427947-UTR-F-serratus_M_contig1155:7812..78301622929052.3427947-UTR-F-serratus_M_contig1155:7812..7830Fucus serratus maleUTRF-serratus_M_contig1155 7813..7830 -
1690962683.5200753-UTR-F-serratus_M_contig1155:7812..78301690962683.5200753-UTR-F-serratus_M_contig1155:7812..7830Fucus serratus maleUTRF-serratus_M_contig1155 7813..7830 -
1622929052.3596587-UTR-F-serratus_M_contig1155:8260..83751622929052.3596587-UTR-F-serratus_M_contig1155:8260..8375Fucus serratus maleUTRF-serratus_M_contig1155 8261..8375 -
1690962683.532239-UTR-F-serratus_M_contig1155:8260..83751690962683.532239-UTR-F-serratus_M_contig1155:8260..8375Fucus serratus maleUTRF-serratus_M_contig1155 8261..8375 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.2224302-CDS-F-serratus_M_contig1155:4157..42081622929052.2224302-CDS-F-serratus_M_contig1155:4157..4208Fucus serratus maleCDSF-serratus_M_contig1155 4158..4208 -
1690962683.4430583-CDS-F-serratus_M_contig1155:4157..42081690962683.4430583-CDS-F-serratus_M_contig1155:4157..4208Fucus serratus maleCDSF-serratus_M_contig1155 4158..4208 -
1622929052.236098-CDS-F-serratus_M_contig1155:5102..51961622929052.236098-CDS-F-serratus_M_contig1155:5102..5196Fucus serratus maleCDSF-serratus_M_contig1155 5103..5196 -
1690962683.4592266-CDS-F-serratus_M_contig1155:5102..51961690962683.4592266-CDS-F-serratus_M_contig1155:5102..5196Fucus serratus maleCDSF-serratus_M_contig1155 5103..5196 -
1622929052.2526915-CDS-F-serratus_M_contig1155:5651..57401622929052.2526915-CDS-F-serratus_M_contig1155:5651..5740Fucus serratus maleCDSF-serratus_M_contig1155 5652..5740 -
1690962683.468576-CDS-F-serratus_M_contig1155:5651..57401690962683.468576-CDS-F-serratus_M_contig1155:5651..5740Fucus serratus maleCDSF-serratus_M_contig1155 5652..5740 -
1622929052.2685838-CDS-F-serratus_M_contig1155:6020..61221622929052.2685838-CDS-F-serratus_M_contig1155:6020..6122Fucus serratus maleCDSF-serratus_M_contig1155 6021..6122 -
1690962683.4775326-CDS-F-serratus_M_contig1155:6020..61221690962683.4775326-CDS-F-serratus_M_contig1155:6020..6122Fucus serratus maleCDSF-serratus_M_contig1155 6021..6122 -
1622929052.2865303-CDS-F-serratus_M_contig1155:6689..67941622929052.2865303-CDS-F-serratus_M_contig1155:6689..6794Fucus serratus maleCDSF-serratus_M_contig1155 6690..6794 -
1690962683.4892733-CDS-F-serratus_M_contig1155:6689..67941690962683.4892733-CDS-F-serratus_M_contig1155:6689..6794Fucus serratus maleCDSF-serratus_M_contig1155 6690..6794 -
1622929052.3055103-CDS-F-serratus_M_contig1155:7366..74581622929052.3055103-CDS-F-serratus_M_contig1155:7366..7458Fucus serratus maleCDSF-serratus_M_contig1155 7367..7458 -
1690962683.4984596-CDS-F-serratus_M_contig1155:7366..74581690962683.4984596-CDS-F-serratus_M_contig1155:7366..7458Fucus serratus maleCDSF-serratus_M_contig1155 7367..7458 -
1622929052.3245115-CDS-F-serratus_M_contig1155:7742..78121622929052.3245115-CDS-F-serratus_M_contig1155:7742..7812Fucus serratus maleCDSF-serratus_M_contig1155 7743..7812 -
1690962683.5073798-CDS-F-serratus_M_contig1155:7742..78121690962683.5073798-CDS-F-serratus_M_contig1155:7742..7812Fucus serratus maleCDSF-serratus_M_contig1155 7743..7812 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1155.1274.1

>prot_F-serratus_M_contig1155.1274.1 ID=prot_F-serratus_M_contig1155.1274.1|Name=mRNA_F-serratus_M_contig1155.1274.1|organism=Fucus serratus male|type=polypeptide|length=201bp
MMRSNRPFSCINVFDNLHKKIPKAMIQKLLDELTRDGTLKVQEYNKARIY
FANQDALPGGAGEVSDENLRKLEQEAKDLTSKLEVVSAEARATQARVQAL
AAQPTDTDLDDKLASTAREVEQMEARNAAIKAKGHGASAGEGGMKATRAG
FSKFRALWVKRKRNAMDVVDMIADGMDKKPKVIMDMLGLEPDEDPVPPKM
*
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mRNA from alignment at F-serratus_M_contig1155:3685..8375-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1155.1274.1 ID=mRNA_F-serratus_M_contig1155.1274.1|Name=mRNA_F-serratus_M_contig1155.1274.1|organism=Fucus serratus male|type=mRNA|length=4691bp|location=Sequence derived from alignment at F-serratus_M_contig1155:3685..8375- (Fucus serratus male)
GTCGAACCTTACGCCAAAGAGTGCAGTGAGCGCTGCCTCCATAAGTGCGG
AGAGCGCCTCGAAGGGAGGGCAGGGGGCGGCAGTTGCGGCATCCGGCGGT
GCCAAAACGCCCAAGGTGAGCGATAGGAGTGGGTGGGACGATGAGTACAA
GACGGGGCGGGAGTGTAGGGGAGAAATATGCGGTTGTCCCCGTGGCAAGA
GAACGATTTTTCCGTGCGCCTTATAGTTTAAATAAGCCTCACAGAGCCTT
CTACGCAAGACATATGCGCAACGCGAGTTTGGTGTATCGTATCCGCGTCG
GAGTCTTTGATGTACAGCAGCAATTAACGATATATCAGGGAGGGTTGAGG
TAAGGGTTAGAGTTAGCATTTGGGGAGAGCCGTCAACAATATAAACAAAA
CGAGAGGAATTATGTGGGCCGCGGAACGTTTAAGTGTAGTTTATTATAGT
ATTACCCGGCACATCACTATTATGTACATACCAGTGTTTGATTTTTCGTT
AGACGCGCATTCTTCCGCCGCTACTACGAATGGTGCGTGCCTCAGGGAGC
GGTTTCGGACTACATGATGCGTTCCAATCGACCCTTCAGCTGCATTAACG
TCTTCGACAATCTGCATAAGAAGATCCCCAAAGGTGAGTCTCGTTCAATA
CTTTTTTTGTCAAGACGTTTCTCAATATGTGTATATCGTCCCGCGTGATT
CCCCTTGTCCACGGAGGAGGGCGTCGTCCGAAAACAGAGACCACGTTCAG
GGCACAACCTCCCTGAAAGCACGATGCAGAGTATACAAAAATAAATGATG
CTCGATTTCAATATGTTTTTACAAGTACCACGCTGGTTCTCGCCTTGAAC
TAGAACAACGATTCTTCACGTGCGCCTGCCGTCTTGTGCCTGGCGGATAT
CCAAACCTGACACCCAGCAATGATACAAAAGCTTCTGGATGAACTGACGC
GAGACGGGACGCTGAAGGTACAGGAATACAACAAGGCCAGGATTTACTTC
GCCAATCAGGTAGGGTGGCAACTTCGTGGAGACCACCTCGCCAAGCTTTG
GCTTTTTGTGGGCGTTCTCTTGCTGCCGACCGCCTTGTGTTGGAAGAATT
TCCCGCGCGCGTCGGCTGCTCCTATTCAGAATTTTCTGTAAAAGTGAGTG
TGGCATAGAATTGTACGACCGAGAAAATTATGTTTCTAAGCATTTAGTCG
AACGATGAAATCCCATCCCCGACCTCATGACCCGAAAGACCGGCTTTCAA
TCGCACCGGTGAGTACTATTCTTTGGCTTGCAATCCAATCTGCCAGAGCT
GTCGACACCAAATCCCATCTCAGGGCTCTCTGTGAAATCAGACACGATAA
TACGTAGTACTAGTGATAGTAGCGCGACGAAAGCTTGGTAATCAAAATCC
TGAGGAAGTGAAGTGCCGCCCTTAATAACAACGCCCAACCCAGCAAAATA
ATGATGACCATAGCAACATCGACAAACACAAAATCGATGTTACATTCAGA
GGGCCCTCGCGCCCTTGATTTACTCCCCCAAGCCCTTGAGCCGCCCCACC
TCTCTCCGTGCCTCAACATCGGTTTGGTCAGGACGCCCTTCCCGGCGGAG
CTGGTGAGGTGTCGGACGAGAACCTGCGCAAGCTCGAGCAGGAAGCGAAA
GATCTTACTTCCAAGCTGGAAGTCGTTTCCGCGGAGGTGCGTGCACGCTC
TGCGCGTTGTTTTTTCTATAGTATATTTTATGCTATTGGGTGTCTGTGGG
ACGTGGGTAGGGATGCATTATTTTTTTGTACCGCACCTGTACAACATACA
GGAAGTCTATTATATTATACATTACATGGTAGTATTTATGCCATGTTTTT
CCCGCTTTTAAATCCCATAATTAGCCCTAGTACCCGACGTGTCATCAGAT
ACTAAATTAAAGAGCGAAGAGTTTTCATGCCGTGCCCCGAGTCGATTGCG
GCACTTGCCACCGAAAGACCTTGGCTTCGCGGTTTCTGATGTCTGGAGTT
TCGTCTATCATTTTTTTTTATCCATCAGAGGTCCTGTGTTGCTGATCGTT
TATTCGGTTTCTTTTTTGTGCGAGTTGATATGAATTACCAGTAAGTTTAG
CGCCAAGCAAGTCTTTCACTGGCGGACGGCATATTCTGTCTTTCTTCGAG
TACTTTCCATACGTAGAATCCGCCTCTGTGGCCTGATCCCCCACCCCCTC
GGTCCCCTCATCCCTAAAATAATTGGGAACTCCCCCCTAAAAAAACTCTT
AAGGCGAGAGCCACGCAGGCGAGGGTACAAGCACTGGCGGCACAGCCAAC
CGACACAGATCTTGACGACAAACTGGCTTCGACCGCCCGAGAAGTCGAGC
AGATGGCGAGTCAAGGTCTTGGGGCTAGGCGGGGGGGGACACGACGGAGC
TGCTCCCGGGTTTCGCGAAGATTATAGTCATTTTGTGGCCATAGATTTCG
CCGACTTTTAAAGAAAATAACCAAAATACTCGATGGCTGTATGGACTCGG
ACATTATGGTTGTGGTGCGACGCACGGTCCACGGTGGAAGAAATGTTCGA
CGATATATCTTGACTGTAGTACCGTGAGTATGACTTTGCGACACGCCATC
CCTGGTGGTGCAAAACATGAAATACGTGCGTACAGGAAGCGAGGAATGCC
GCGATCAAGGCCAAGGGACACGGTGCCAGTGCCGGGGAGGGGGGTATGAA
GGCGACCAGGGCAGGATTCAGCAAGTGAGTGCGTCAGCGCGCGTCTTTGG
CTTGGCAAATACTCCCACAAACCAAATGAAATTGGATTCCTGCCCTCTTC
GTATCTCCAGGATCTTATGACAGATTATCTTGACCCAGCCGTGATACTTT
CATAGGTGCAGCAGCAGTATCTTATCTGTGCCTCCACGATAGGAACTTTT
TCTGGGCCGCAAAAACACGTGACTCTGTTTTACAGGAGTCTCTTACATGC
CATCAAAACACGTAATACTGCTCCCCTCAGACCATCAACTGACGTCATCT
GATTCTTTCGAAACGACTATTGATATGGTTCTACTATCAATTCGATTATT
TTTTTTCATTTCTACGTTTTGTTTGGCTTCCTTCTCCAGACTAACCATTT
ATTTATATTTTACGTTTTTGTCATAAACCTCCTTTTGTTTTTGCCCTATG
ATTTTTCCCTTTGCTAAATCGGCGGAAAGGTTCCGAGCATTGTGGGTGAA
ACGCAAGCGAAACGCCATGGACGTAGTTGACATGATCGCCGATGGAATGG
ATAAGAAACCCAAGGTCATCATGGTGAGGCGAGAAACTTCTTCCGGAAGT
CCTGTATTGTATAGTAGTCAAAGTTGAATGTTTGGAAGAAGGCCACTATA
ATAGTTACTATTATCGAGGTCCTACATAATATGCTGGTCAAAAACATTGC
CCTCCCGGAAATAGTGAAACATACCTGGCACAGTATAGAATATGCGAGTC
AAGATTGTTGTAAGAAAGAAGCGATAAAGGATTTTCGCGGTTCAATCCTC
GGTTACGATGAAAAAGTTAGTTGCGGCCATTGTAGATACTGCAGTGCATG
GCGAGGGGAGATCCCCGGAGATCACTGTTGTTCCGCGCAAATATTTTGGA
AGTTAGAAGCGATAAACCACTAGACTACTGAGCCATGACTGAGTAGTCTA
GTGGTTTATCGCTTCTATCTTGATGGGGAGGATTTTCGCGGTTCAATCCC
CGGTTACGATGAAAAAGTTAGTTGCGGTCATTGTAGATACTGCAGTGCAT
GGCGAGGGGAAATCCCCGGAATGACTGAGTAGTCTAGTGGTTTATCGCTT
CTTTCTTACAAAGACATCCAAGTGTTGTCGTGTTCATCCCTCCCCCTCCT
CGAAAAAAAAAAAGGATTGCCAAATGAACATCTTGGGCGTATGAAAAGTC
GTTTTTTCCCCTGCTGGACCAAAATAACCTTGTTGCCTTGATGCCTTGTT
GCCTTGAAACATGTCGATTATGCCCTGCCTCCACCGCCCCCACCGCCAAT
ACACATATATTTTGAGCTTTATATGTGTCTTTAAGGGAATAGCACAGTAT
ATACCAGTATATCTTTGGTGTGTCCCCATTTCCCCCTGAGGCTACCCGTA
TGTCATACTCTGTGGTTTTCCTTTCCTTTGCTTCTTTTTATTTCTGTTCG
TCTCTGTAAAATAATAGGACATGCTAGGGCTTGAACCGGACGAAGATCCT
GTTCCACCCAAGATGTAGATCCTGTCCCACCCAAGATGTAGATCCTGTCC
CACCAGGCGTCTGACAAGCCACGAGTCTCAGAGCGCTTCGTTCGACATAT
CTTGGTATGCCAGGGTTTCTCAGATGACTTCAGTACAAAGAGCACGAGGT
TTTTATTCCGTCTCTTGAGGGCAAACGTGTACACTACGTCTACTTCGTGT
ATGTATTAAGGCGCTGTAGGGCTATCTATACTTGCAATAGGGCTAGACGC
GTCTGGTTGAATCAGCAGTGGAGGTTGAAAGCATTCTCATTTGCTTTACT
TTGTATCACTTATTTCGAGGTTGAACACATTCTCCCCGCCCAGGTCCCTG
TACAAAATCTAGGTATGTACTGTACTTGCACTGTGTCCTGTTTTCGACAC
AATTAAAGTACTGGTATAGGTAGTCAGTTTGGTTGATTCCGCTTTATCAT
AAAAGTTAGTCGTGGGGTTCGAAGGACCCGGTATTTTCGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1155:3685..8375-

>mRNA_F-serratus_M_contig1155.1274.1 ID=mRNA_F-serratus_M_contig1155.1274.1|Name=mRNA_F-serratus_M_contig1155.1274.1|organism=Fucus serratus male|type=CDS|length=1206bp|location=Sequence derived from alignment at F-serratus_M_contig1155:3685..8375- (Fucus serratus male)
ATGATGCGTTCCAATCGACCCTTCAGCTGCATTAACGTCTTCGACAATCT
GCATAAGAAGATCCCCAAAGATGATGCGTTCCAATCGACCCTTCAGCTGC
ATTAACGTCTTCGACAATCTGCATAAGAAGATCCCCAAAGCAATGATACA
AAAGCTTCTGGATGAACTGACGCGAGACGGGACGCTGAAGGTACAGGAAT
ACAACAAGGCCAGGATTTACTTCGCCAATCAGCAATGATACAAAAGCTTC
TGGATGAACTGACGCGAGACGGGACGCTGAAGGTACAGGAATACAACAAG
GCCAGGATTTACTTCGCCAATCAGGACGCCCTTCCCGGCGGAGCTGGTGA
GGTGTCGGACGAGAACCTGCGCAAGCTCGAGCAGGAAGCGAAAGATCTTA
CTTCCAAGCTGGAAGTCGTTTCCGCGGAGGACGCCCTTCCCGGCGGAGCT
GGTGAGGTGTCGGACGAGAACCTGCGCAAGCTCGAGCAGGAAGCGAAAGA
TCTTACTTCCAAGCTGGAAGTCGTTTCCGCGGAGGCGAGAGCCACGCAGG
CGAGGGTACAAGCACTGGCGGCACAGCCAACCGACACAGATCTTGACGAC
AAACTGGCTTCGACCGCCCGAGAAGTCGAGCAGATGGCGAGAGCCACGCA
GGCGAGGGTACAAGCACTGGCGGCACAGCCAACCGACACAGATCTTGACG
ACAAACTGGCTTCGACCGCCCGAGAAGTCGAGCAGATGGAAGCGAGGAAT
GCCGCGATCAAGGCCAAGGGACACGGTGCCAGTGCCGGGGAGGGGGGTAT
GAAGGCGACCAGGGCAGGATTCAGCAAGAAGCGAGGAATGCCGCGATCAA
GGCCAAGGGACACGGTGCCAGTGCCGGGGAGGGGGGTATGAAGGCGACCA
GGGCAGGATTCAGCAAGTTCCGAGCATTGTGGGTGAAACGCAAGCGAAAC
GCCATGGACGTAGTTGACATGATCGCCGATGGAATGGATAAGAAACCCAA
GGTCATCATGGTTCCGAGCATTGTGGGTGAAACGCAAGCGAAACGCCATG
GACGTAGTTGACATGATCGCCGATGGAATGGATAAGAAACCCAAGGTCAT
CATGGACATGCTAGGGCTTGAACCGGACGAAGATCCTGTTCCACCCAAGA
TGTAGGACATGCTAGGGCTTGAACCGGACGAAGATCCTGTTCCACCCAAG
ATGTAG
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