mRNA_F-serratus_M_contig1144.1238.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1144.1238.1
Unique NamemRNA_F-serratus_M_contig1144.1238.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 236 bits (602), Expect = 8.710e-65
Identity = 127/346 (36.71%), Postives = 196/346 (56.65%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMQWHPVSR-----GTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSG 999
            +G++ VF +K D+ G+V +Y  R  A+GF QI G+ Y ++ SP     ++R  +A+ A  DWE RQ+D++ A+L  ++ EE+++E P+G+ D   +V RL+  +YGL  AG +W+KK   +L   GF R+ ADPCV+     GK+  I+ V+VDD+++  +++      +  L+  F +KDLGE    LG  I R+RK +T+T  Q+ Y  T+ ERF   K + IP+P       R    K D EI   + H V       G+ M     T P LAY   TL++F  NPG EH  A+ +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG
Sbjct:  899 VGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKIT-ILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLR----KRDDEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISG 1239          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 215 bits (547), Expect = 6.130e-61
Identity = 124/341 (36.36%), Postives = 193/341 (56.60%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKND--AEIAEMQWHPVSRGTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSA-WVDADHASCPDTRRSVSG 999
            +G K VF +K D+DG + +Y  R  A+G+ QI G+ Y E+ +P     S+  AL + A  D E  Q+DV+ A+L  ++ EE+Y+  P+GY D   +V RL+K +YGL  +G  W+ +F  +L + GF + +AD CV++R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG++     PV T   P        +D  A+ A +  +    G+ +     TRPD+++    L +F  NPGPEHW A+ +  +YL  T +L + +    E   +S  + DA  AS PD R+S+SG
Sbjct:   16 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNAR--PVSTLLDPNVILKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISG 353          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048)

HSP 1 Score: 223 bits (569), Expect = 1.730e-60
Identity = 130/342 (38.01%), Postives = 192/342 (56.14%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDS-PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMQWHPVSRGTNM-------TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 999
            L  K VFK K D   +V KY  R   KGF+Q KGI + E  SP    +SIR+ L ++A ++ E  Q+DV+ AFL   + EE+Y+E P+G+  S  N V +L+K++YGL  A   W KKF   + ++G++++ AD CV+ +K      V +++YVDD+L++ +  +  ++  ++L  SF +KDLG     LG  ITRDRK R +   Q++Y + V  RF +     + +P      LS+   P +  EI EM   P S            TRPD+A+    +++F  NPG EHW+AV   L+YLK T  L + YGGA  D  L  + DAD A   D+R+S SG
Sbjct:  690 LKNKWVFKLKKDGSEKVVKYKARLVVKGFQQKKGIDFDEIFSPVVKMTSIRVILGMVASMNLELEQMDVKTAFLHGGLDEEIYMEQPEGFEVSGDNLVCKLKKSLYGLKQAPRQWYKKFDSCMTSQGYKKTSADECVYIQKFSDGNFVALLLYVDDILIVGKDAKKINQLKKELSKSFDMKDLGPAQQILGMQITRDRKNRRLWLSQEKYIERVLARFNMNNAKPVSIPLANHFKLSKRSCPSSKEEIGEMSSVPYSSAVGSLMYAMVCTRPDIAHAVGKVSRFLSNPGKEHWEAVKWILRYLKGTIKLCLCYGGA--DPILEGYTDADMAGDLDSRKSTSG 1029          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 222 bits (565), Expect = 7.210e-60
Identity = 121/339 (35.69%), Postives = 193/339 (56.93%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMQWHPVSRGTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSA-WVDADHASCPDTRRSVSG 999
            +G K VF +K D+DG + +Y  R  A+G+ QI G+ Y E+ +P     S+R AL + A  D E  Q+DV+ A+L  ++ EE+Y+  P+GY D   +V RL+K +YGL  +G  W+++F  +L + GF + +AD CV++R   G++  II V+VDDLL+ SET +D      +L + F +KDLGE    +G  I RDR+  T++  Q++Y + V  RFG++    +  P     + +       A+ A +  +    G+ +     TRPD+++    L +F  NPGPEHW A+ +  +YL  T +L + +    E   +S  + DA  AS PD R+S+SG
Sbjct:  923 IGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISG 1260          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A2N9GV19_FAGSY (Integrase catalytic domain-containing protein n=6 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GV19_FAGSY)

HSP 1 Score: 219 bits (557), Expect = 7.510e-60
Identity = 124/343 (36.15%), Postives = 191/343 (55.69%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAP-LSRADGPKNDAEIAEMQWHPVSRGTNM-------TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 999
            +G K VFK K D  G++E+Y  R  AKGF Q +G+ Y+E+ SP  ++ S R+ +A++A  D E  Q+DV+ AFL  D+TE++Y+  PDG++ S  +  V +L+K++YGL  A   W  KF   + + GF+ +  D C++  K  G  ++ +V+YVDD+L+ S            L  +F +KDLGE S+ LG  I RDR    +   Q+ Y   V ERF +   +    P  K   LS+   P+ND E  EM+  P +            TRPD+A+    L +F  +PG +HW+A  K L+YL+RT    +TY   ++ +++  + DAD+A C D  +S SG
Sbjct:  322 IGCKWVFKTKKDSTGKIERYKARLVAKGFSQKEGVDYKETFSPVSSKDSFRIVMALVAHFDLELHQMDVKTAFLNGDLTEDVYMLQPDGFQVSGKEHMVCKLKKSIYGLKQASRQWYLKFDNVVTSFGFKENPVDHCIYL-KISGSKIIFLVLYVDDILLASNDLGLLRETKRFLFDNFEMKDLGEASFVLGIEIHRDRSRGILGLSQKSYISRVLERFNMSTCAAGDAPVVKGDKLSKLQCPQNDLERNEMKKIPYASAVGSLMYAQVCTRPDIAFAISVLGRFQSDPGMDHWRAAKKVLRYLQRTKDFMLTYR-RSDLLEVVGYADADYAGCADDLKSTSG 662          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 213 bits (541), Expect = 8.950e-60
Identity = 121/341 (35.48%), Postives = 190/341 (55.72%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-PLSRADGPKNDAEIAEMQWHP-------VSRGTNMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 999
            + TK VF +K ++ G + ++  R  A GF Q+ G+ + E+ +   +  SIR+ L+V     +   QLDV+ AFL AD+ E++Y+E P+G +   ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G     I +YVDD++V   T+       + + + F IK+LG + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADGP++D + AEM   P       +      TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG
Sbjct:   38 IKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSG 377          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR)

HSP 1 Score: 210 bits (534), Expect = 1.550e-59
Identity = 122/343 (35.57%), Postives = 192/343 (55.98%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPL-SRADGPKNDAEIAEMQWHPVSR--GTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSG 999
            +G K V+K K+D +G VE++  R  AKG+ Q +GI YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL  ++ E++Y+  P+G++    +  V +L+K+ YGL  A   W  KF   +   GF  +Q D C +  K  G    I+V+YVDD+L+ S +    H +   L S+F +KDLGE SY +G  I RDR + T+   Q+ Y   V  R+ ++  S +  P  K  +      PK + E  +M+  P +   G+ M     TRPD+AY A  L ++  NPG +HWKA  K L+YL+ T    +TY   +++ ++  +  +D A C D ++S SG
Sbjct:   80 VGCKWVYKTKLDPNGNVERFKARLVAKGYTQKEGIDYQETFSPVSQKDSLRIVMALVAHFDLELHQMDVKTAFLNGELYEDVYMTQPEGFKPKGKEHLVCKLKKSTYGLKQASRQWYLKFDEVMKKHGFVMNQVDQCNYL-KMSGSNFAILVIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYLQGTKDYKLTYR-RSDNREVIGYSGSDFAKCKDDKKSTSG 420          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY)

HSP 1 Score: 220 bits (560), Expect = 2.300e-59
Identity = 129/340 (37.94%), Postives = 192/340 (56.47%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGK----APLSRAD-GPKN-DAEIAEMQWHPVSRGTNMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 999
            +  K VFK K   DG +EKY  R  AKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+DV+ AFL  D+ EE+Y+++P G+R S + + +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  I RDR  R +   Q +Y +    + G+     +  P  +      LS A+  PK   + +  + +  +      TRPDLA+T   L++    PG EHW A+M+  +YL+ TA   + Y G T++ K L  +VDAD A+  + RRSV+G
Sbjct:  647 IDCKWVFKIKRGLDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPSGFRRSNSLIWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEIARDRPRRVLELSQHQYVEKCLAQHGMANCRPVSTPMAQNQKLVKLSEAEIDPKPYQSALGSLMYAMIG-----TRPDLAFTVGALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKKPLLRYVDADWAANVNNRRSVTG 980          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A401G4V0_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401G4V0_9APHY)

HSP 1 Score: 220 bits (561), Expect = 2.580e-59
Identity = 131/339 (38.64%), Postives = 194/339 (57.23%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMQWHPVSRGTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMK-LSAWVDADHASCPDTRRSVSG 999
            +  K VFK K   DG +EKY  R  AKGF Q++G+ + E+ +P    +S+R  LA+ A+LD E  Q+DV+ AFL  D+ EE+Y+++P G+  S + V +L KA+YGL  AG  W KK   E  A GF R  +D  VF +   G +++II +YVDD+L+LS+         EDL+S F + DLGE  + LG  ITRDR  R +   Q +Y +    + G+     +  P  +   ++     ++AEI    +  V  G+ M     TRPDLA+T   L++    PG EHW A+M+A +YL+ TA   + Y G T++ + L  +VDAD A+  + RRSV+G
Sbjct:  970 IDCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEGLDFNETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLDEEIYMKVPPGFHRSNSLVWKLNKALYGLKQAGREWYKKIRAEFEALGFTRCHSDHSVFYKNDDG-ILLIIAIYVDDMLILSDNLTAVTTLKEDLKSRFEMTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQHGMADCRPVSTPMAQ---NQKLVKLSEAEIDPKPYQSVL-GSLMYAMIGTRPDLAFTVGALSQHAATPGKEHWIALMRAYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANVNDRRSVTG 1303          
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Match: A0A5N6MU84_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A5N6MU84_9ASTR)

HSP 1 Score: 211 bits (536), Expect = 3.840e-59
Identity = 124/345 (35.94%), Postives = 195/345 (56.52%), Query Frame = 1
Query:    1 LGTKTVFKRKVDQDGRVEKYNCRFGAKGFRQIKGIHYQESSSPTPTRSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIR--KTSVIPVPTGKAPLSRADGPKNDAEIAEMQWHPVSR--GTNM-----TRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGA 1002
            +G K VFK K+D +G +E++  R  AKGF Q + I YQE+ SP   + S+R+ +A++A  D E  Q+DV+ AFL  D+ E+++++ P+G+     +  V +L+K++YGL  A   W  KF   +   GF ++Q D C +  K  G    I+V+YVDD+L+ S +    H +   L  +F +KDLGE SY +G  I RDR +  +   Q+ Y   V  R+ ++    SV PV  G         PK +AE A+M+  P +   G+ M     TRPD+AY    L ++  NPG +HWKA  K L+YL+ T    +TY   ++++++  + D+D A C D ++S SG+
Sbjct:   19 VGCKWVFKTKLDPNGNIERFKARLVAKGFTQKERIDYQETFSPVSRKDSLRIVMALVAHFDLELHQMDVKTAFLNGDLYEDVFMKQPEGFMPEGQEHLVCKLKKSIYGLKQASRQWYLKFDEVMKKHGFLKNQVDQCTYL-KMSGSNFTILVLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVSGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDV-FGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIFGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTYR-RSDNLEVVGYSDSDFAKCKDDKKSTSGS 360          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1144.1238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3AKI0_9AGAM8.710e-6536.71Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A284R853_ARMOS6.130e-6136.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001F00A0481.730e-6038.01DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A284QR88_ARMOS7.210e-6035.69Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A2N9GV19_FAGSY7.510e-6036.15Integrase catalytic domain-containing protein n=6 ... [more]
A0A8K1CTN1_PYTOL8.950e-6035.48Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A5N6NCI1_9ASTR1.550e-5935.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H123_9APHY2.300e-5937.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A401G4V0_9APHY2.580e-5938.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N6MU84_9ASTR3.840e-5935.94Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1144contigF-serratus_M_contig1144:127973..129346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score185.3
Seed ortholog evalue4.1e-44
Seed eggNOG ortholog67593.Physo133076
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1352
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1144.1238.1prot_F-serratus_M_contig1144.1238.1Fucus serratus malepolypeptideF-serratus_M_contig1144 128317..129193 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929045.481656-UTR-F-serratus_M_contig1144:127972..1283161622929045.481656-UTR-F-serratus_M_contig1144:127972..128316Fucus serratus maleUTRF-serratus_M_contig1144 127973..128316 -
1690962680.0800242-UTR-F-serratus_M_contig1144:127972..1283161690962680.0800242-UTR-F-serratus_M_contig1144:127972..128316Fucus serratus maleUTRF-serratus_M_contig1144 127973..128316 -
1622929045.5286725-UTR-F-serratus_M_contig1144:129193..1293461622929045.5286725-UTR-F-serratus_M_contig1144:129193..129346Fucus serratus maleUTRF-serratus_M_contig1144 129194..129346 -
1690962680.112626-UTR-F-serratus_M_contig1144:129193..1293461690962680.112626-UTR-F-serratus_M_contig1144:129193..129346Fucus serratus maleUTRF-serratus_M_contig1144 129194..129346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929045.4978185-CDS-F-serratus_M_contig1144:128316..1285521622929045.4978185-CDS-F-serratus_M_contig1144:128316..128552Fucus serratus maleCDSF-serratus_M_contig1144 128317..128552 -
1690962680.0967343-CDS-F-serratus_M_contig1144:128316..1285521690962680.0967343-CDS-F-serratus_M_contig1144:128316..128552Fucus serratus maleCDSF-serratus_M_contig1144 128317..128552 -
1622929045.5123656-CDS-F-serratus_M_contig1144:128574..1291931622929045.5123656-CDS-F-serratus_M_contig1144:128574..129193Fucus serratus maleCDSF-serratus_M_contig1144 128575..129193 -
1690962680.1051593-CDS-F-serratus_M_contig1144:128574..1291931690962680.1051593-CDS-F-serratus_M_contig1144:128574..129193Fucus serratus maleCDSF-serratus_M_contig1144 128575..129193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1144.1238.1

>prot_F-serratus_M_contig1144.1238.1 ID=prot_F-serratus_M_contig1144.1238.1|Name=mRNA_F-serratus_M_contig1144.1238.1|organism=Fucus serratus male|type=polypeptide|length=285bp
MALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQ
KAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVV
YVDDLLVLSETKQDEHRAMEDLRSSFPIKDLGEISYYLGCHITRDRKART
VTFDQQRYAQTVTERFGIRKTSVIPVPTGKAPLSRADGPKNDAEIAEMQW
HPVSRGTNMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLG
VTYGGATEDMKLSAWVDADHASCPDTRRSVSGAR*
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mRNA from alignment at F-serratus_M_contig1144:127973..129346-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1144.1238.1 ID=mRNA_F-serratus_M_contig1144.1238.1|Name=mRNA_F-serratus_M_contig1144.1238.1|organism=Fucus serratus male|type=mRNA|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig1144:127973..129346- (Fucus serratus male)
CTCGGCACCAAGACCGTTTTTAAACGGAAGGTCGACCAGGATGGCCGTGT AGAAAAATACAATTGCCGCTTCGGGGCCAAGGGTTTCCGCCAGATCAAGG GGATTCATTACCAAGAGTCATCGTCGCCGACACCAACACGGTCGAGCATC CGGATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCT TGACGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACG TTGAGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTG CAGAAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAA GTTCGGCGGAGAGTTGATAGCGAAGGGGTTCGAAAGGTCCCAAGCCGATC CCTGTGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTG GTCTACGTTGACGATCTACTGGTGCTGAGCGAAACGAAGCAGGACGAGCA TCGGGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGG AGATCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGG ACGGTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATT CGGAATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCACCAC TTTCGAGGGCAGACGGGCCGAAAAACGACGCTGAGATCGCAGAGATGCAA TGGCATCCCGTATCGCGAGGCAGTGGGGGCACTAATGTAGGTAGCCAACA TGACTCGGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGT GACAACCCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTA CCTGAAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGG ACATGAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATGTCCTGAT ACGCGTCGTTCGGTATCGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATC AGTTGGTTTTCGCGGGCGCAGAGAATAACCGCGACAGCGACGTCCGAATC GGAGTACGTAGCACTGGCGGAGATTGTGAATGAGCTACGTTTCCTTCGGC AGGTGAAAGCGTTTATGGTACCTCCGATCGACACCAACATCCGTGTTCAC GAGGACAACGAAGGCGCTATCAAGATGGCAGAGAACAGGTTTAGTAGTCG ACGAACAAGACACATCGACGTGAAGCATCATATGGTTCGGGATGCCGTCG ATGGGGGAATAGTCCGTGTAGAGTATGTCAAGTCGAGAGAACAGCATGCG GACGTACTAACTAAGGCGATAGAT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1144:127973..129346-

>mRNA_F-serratus_M_contig1144.1238.1 ID=mRNA_F-serratus_M_contig1144.1238.1|Name=mRNA_F-serratus_M_contig1144.1238.1|organism=Fucus serratus male|type=CDS|length=1710bp|location=Sequence derived from alignment at F-serratus_M_contig1144:127973..129346- (Fucus serratus male)
ATGGCGCTGGCGGTGATGGCCCAGTTGGACTGGGAGGGGCGGCAGCTTGA
CGTAGAAATGGCGTTTCTCGAGGCGGATGTTACGGAGGAGCTATACGTTG
AGCTCCCCGATGGGTATCGCGACTCGCCGAATCAGGTTGGACGACTGCAG
AAGGCCATGTACGGCCTGATGCACGCCGGACTACTGTGGTCGAAGAAGTT
CGGCGGAGAGTTGATAGCGAAGGGGTTCGAAAGGTCCCAAGCCGATCCCT
GTGTGTTCCGGCGGAAGCATCTAGGGAAGGTCGTCGTCATCATTGTGGTC
TACGTTGACGATCTACTGGTGCTGAGCGAAACGAAGCAGGACGAGCATCG
GGCGATGGAAGACCTTCGATCCAGCTTCCCCATCAAGGATCTAGGGGAGA
TCTCGTACTACCTGGGATGTCACATTACTCGGGACCGCAAGGCCAGGACG
GTGACGTTCGATCAGCAGCGTTACGCGCAGACAGTAACCGAGCGATTCGG
AATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGGAAAGCACCACTTT
CGAGGGCAGACGGGCCGAAAAACGACGCTGAGATCGCAGAGATGCAATGG
CATCCCGTATCGCGAGGCAATGGCGCTGGCGGTGATGGCCCAGTTGGACT
GGGAGGGGCGGCAGCTTGACGTAGAAATGGCGTTTCTCGAGGCGGATGTT
ACGGAGGAGCTATACGTTGAGCTCCCCGATGGGTATCGCGACTCGCCGAA
TCAGGTTGGACGACTGCAGAAGGCCATGTACGGCCTGATGCACGCCGGAC
TACTGTGGTCGAAGAAGTTCGGCGGAGAGTTGATAGCGAAGGGGTTCGAA
AGGTCCCAAGCCGATCCCTGTGTGTTCCGGCGGAAGCATCTAGGGAAGGT
CGTCGTCATCATTGTGGTCTACGTTGACGATCTACTGGTGCTGAGCGAAA
CGAAGCAGGACGAGCATCGGGCGATGGAAGACCTTCGATCCAGCTTCCCC
ATCAAGGATCTAGGGGAGATCTCGTACTACCTGGGATGTCACATTACTCG
GGACCGCAAGGCCAGGACGGTGACGTTCGATCAGCAGCGTTACGCGCAGA
CAGTAACCGAGCGATTCGGAATTCGGAAGACCAGCGTGATCCCTGTTCCT
ACGGGGAAAGCACCACTTTCGAGGGCAGACGGGCCGAAAAACGACGCTGA
GATCGCAGAGATGCAATGGCATCCCGTATCGCGAGGCACCAACATGACTC
GGCCTGACCTAGCTTATACCGCGCACACGCTCGCCAAGTTCGGTGACAAC
CCCGGGCCCGAGCACTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAA
ACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGA
AGCTATCGGCATGGGTGGACGCCGATCACGCATCATGTCCTGATACGCGT
CGTTCGGTATCGGGGGCGCGGTGACCAACATGACTCGGCCTGACCTAGCT
TATACCGCGCACACGCTCGCCAAGTTCGGTGACAACCCCGGGCCCGAGCA
CTGGAAGGCAGTAATGAAAGCGCTACAGTACCTGAAACGAACGGCGAGCC
TAGGGGTAACATATGGAGGCGCGACGGAGGACATGAAGCTATCGGCATGG
GTGGACGCCGATCACGCATCATGTCCTGATACGCGTCGTTCGGTATCGGG
GGCGCGGTGA
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